NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 2058419004

2058419004: Hot spring viral communities from Great Boiling Spring, Nevada -



Overview

Basic Information
IMG/M Taxon OID2058419004 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0060837 | Gp0051787 | Ga0026229
Sample NameHot spring viral communities from Great Boiling Spring, Nevada -
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?Y
Use PolicyOpen

Dataset Contents
Total Genome Size27375388
Sequencing Scaffolds56
Novel Protein Genes58
Associated Families5

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → Viruses → Predicted Viral16
Not Available24
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon1
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Pyrodictiaceae → Pyrodictium → unclassified Pyrodictium → Pyrodictium sp.5
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon5
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon2
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX2531
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → unclassified Thermoprotei → Thermoprotei archaeon1
All Organisms → cellular organisms → Archaea1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHot Spring Microbial Communities From Great Boiling Spring, Nevada
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Thermal Springs → Unclassified → Unclassified → Hot Spring → Hot Spring Microbial Communities From Great Boiling Spring, Nevada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biome → hot spring → spring water
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationGreat Boiling Spring, Nevada
CoordinatesLat. (o)40.65833Long. (o)-119.37772Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F003460Metagenome / Metatranscriptome485Y
F004367Metagenome / Metatranscriptome441Y
F027047Metagenome196Y
F058176Metagenome / Metatranscriptome135N
F104050Metagenome101Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
GBSWBV_contig00462All Organisms → Viruses → Predicted Viral2355Open in IMG/M
GBSWBV_contig00490Not Available2323Open in IMG/M
GBSWBV_contig00689All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon2054Open in IMG/M
GBSWBV_contig00723All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Pyrodictiaceae → Pyrodictium → unclassified Pyrodictium → Pyrodictium sp.2009Open in IMG/M
GBSWBV_contig00907Not Available1862Open in IMG/M
GBSWBV_contig00946Not Available1834Open in IMG/M
GBSWBV_contig01037All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon1783Open in IMG/M
GBSWBV_contig01099All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon1745Open in IMG/M
GBSWBV_contig01189All Organisms → Viruses → Predicted Viral1697Open in IMG/M
GBSWBV_contig01352All Organisms → Viruses → Predicted Viral1620Open in IMG/M
GBSWBV_contig01493All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX2531555Open in IMG/M
GBSWBV_contig01663All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → unclassified Thermoprotei → Thermoprotei archaeon1501Open in IMG/M
GBSWBV_contig01691All Organisms → Viruses → Predicted Viral1493Open in IMG/M
GBSWBV_contig01725All Organisms → Viruses → Predicted Viral1486Open in IMG/M
GBSWBV_contig01801All Organisms → Viruses → Predicted Viral1463Open in IMG/M
GBSWBV_contig01825All Organisms → Viruses → Predicted Viral1451Open in IMG/M
GBSWBV_contig01917All Organisms → Viruses → Predicted Viral1415Open in IMG/M
GBSWBV_contig02318Not Available1336Open in IMG/M
GBSWBV_contig02332All Organisms → Viruses → Predicted Viral1331Open in IMG/M
GBSWBV_contig02427All Organisms → Viruses → Predicted Viral1309Open in IMG/M
GBSWBV_contig02437Not Available1308Open in IMG/M
GBSWBV_contig02582All Organisms → Viruses → Predicted Viral1278Open in IMG/M
GBSWBV_contig02628Not Available1266Open in IMG/M
GBSWBV_contig02916All Organisms → Viruses → Predicted Viral1206Open in IMG/M
GBSWBV_contig03037Not Available1191Open in IMG/M
GBSWBV_contig03096All Organisms → Viruses → Predicted Viral1172Open in IMG/M
GBSWBV_contig03199All Organisms → cellular organisms → Archaea1165Open in IMG/M
GBSWBV_contig03394All Organisms → Viruses → Predicted Viral1136Open in IMG/M
GBSWBV_contig03836All Organisms → Viruses → Predicted Viral1081Open in IMG/M
GBSWBV_contig03984Not Available1056Open in IMG/M
GBSWBV_contig04163All Organisms → Viruses → Predicted Viral1047Open in IMG/M
GBSWBV_contig04534Not Available1009Open in IMG/M
GBSWBV_contig04736Not Available987Open in IMG/M
GBSWBV_contig05335Not Available929Open in IMG/M
GBSWBV_contig05781All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Pyrodictiaceae → Pyrodictium → unclassified Pyrodictium → Pyrodictium sp.888Open in IMG/M
GBSWBV_contig06147Not Available806Open in IMG/M
GBSWBV_contig06576All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon825Open in IMG/M
GBSWBV_contig07045All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon794Open in IMG/M
GBSWBV_contig07559All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Pyrodictiaceae → Pyrodictium → unclassified Pyrodictium → Pyrodictium sp.757Open in IMG/M
GBSWBV_contig08046All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon727Open in IMG/M
GBSWBV_contig08420All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon692Open in IMG/M
GBSWBV_contig08443Not Available708Open in IMG/M
GBSWBV_contig08992Not Available677Open in IMG/M
GBSWBV_contig09164All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Pyrodictiaceae → Pyrodictium → unclassified Pyrodictium → Pyrodictium sp.663Open in IMG/M
GBSWBV_contig09289Not Available660Open in IMG/M
GBSWBV_contig09295Not Available660Open in IMG/M
GBSWBV_contig09890All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Pyrodictiaceae → Pyrodictium → unclassified Pyrodictium → Pyrodictium sp.629Open in IMG/M
GBSWBV_contig10313All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon606Open in IMG/M
GBSWBV_contig10424Not Available604Open in IMG/M
GBSWBV_contig10523Not Available599Open in IMG/M
GBSWBV_contig10698Not Available590Open in IMG/M
GBSWBV_contig10733Not Available590Open in IMG/M
GBSWBV_contig10799Not Available586Open in IMG/M
GBSWBV_contig11967Not Available535Open in IMG/M
GBSWBV_contig12021Not Available533Open in IMG/M
GBSWBV_GG5TF7S02GW7LNNot Available505Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
GBSWBV_contig00462GBSWBV_00598070F104050VSEQKKCIIRLRKYCVVYDSLNSEEKEKYGSKDYVITYCGLCIKTYYAKAKMRLVNKFSVVNTL
GBSWBV_contig00490GBSWBV_00641820F104050VSEERKCIIRLRKYCVVYESLTQEEKNKYGSKDYVITYCALCIKTYYAKAKMKLVNKYSVVNTL
GBSWBV_contig00689GBSWBV_00148750F027047MDLSSLGIAILSAVVYSLSMYVKKHLNPDNPQSFDVTKFLTTLIWGIIVGAILQFSGLPITEQSVEEQFIAYAGLIAITENIVKAIVRALSR
GBSWBV_contig00723GBSWBV_00205720F104050SLIHFLFKPTHLYIHLLERELSEKKCIIRLRKTCVVYSELQSSEQEKYGTKEFVVTYCSMCIKAYYAKAKMKLVNKYSVVNTL
GBSWBV_contig00907GBSWBV_00504470F027047MDWSSLGIAVLSAVIYSLSMYVKKHLNPDNPQAFDKAKFLTTLIWGIIIGVVLQLSGVPITEQTVEEQFVAYAGLIAITENIIKAVIRAVRRLK
GBSWBV_contig00946GBSWBV_00567510F027047MDWSSLGIAVLSAVIYSLSMYVKKHLNPDNPQAFDKAKFLTTLIWGIIIGVVLQLSGVEITERTVEEQFVAYAGLIAITENIIKAVIRAVRRLK
GBSWBV_contig01037GBSWBV_00366690F027047MDLSSLGIAVLSAVVYSLSMYVKKHLNPDNPQSFDVTKFLTTLIWGAAIGVVLQLSGVPITEQNVEEQFIAYTGLIAITENIVKAILRALSR
GBSWBV_contig01099GBSWBV_00733460F027047MDLSSLGIAVLSAVVYSLSMYVKKHLNPDNPQSFDVTKFLTTLIWGAVIGVVLQLSGVPITEQTVEEQFIAYAGLIAITENIVKAILRALSR
GBSWBV_contig01189GBSWBV_00141480F104050MILLVVENLSSSERKCIIRLRKYCVVYEALSDSEREKYGSKEFIVTFCGMCIKSYYAKAKMRLVNKFSVVNTL
GBSWBV_contig01352GBSWBV_00405520F104050VSEAKKCIIRLRKTCVVFESLVDEERQKYGTKEFVVTYCSMCIKTYYAKAKHKLVNKFSVVNTL
GBSWBV_contig01493GBSWBV_00624030F004367MANGTSCNGRYSPDQWTEGLLTGAGASLGRVLDERQRHAVNLALEVIAYLLAAIPAETMQLSDVIRLLKWYVGGINNAESKPE
GBSWBV_contig01493GBSWBV_00624040F003460MPKASRNERYMHDLQHVYMSLHEVLAPRGLYPEASLMLVTNLRYSGNLRDVAIELVIRSRVGGTPVWRAHESLRVPGRMKLRSVADALCGLMLRATYDIEAQISLPGSAQDRQPGRARP
GBSWBV_contig01663GBSWBV_00077770F027047MDWSSLGIAVLSAVIYSLSMYVKKHLNPDNPQAFDKAKFLTTLIWGIIIGVVLQLSGVGITERTVEEQFVAYAGLIA
GBSWBV_contig01691GBSWBV_00123580F104050MTLPAEREMSESKKCIIRLRKHCVVYETLIQEERQKYGSKEYVVTYCAMCIKAFYAKAKIKLLNKYSVVNTL
GBSWBV_contig01725GBSWBV_00180450F104050MTSLVVKSEVSEERKCIIRLRKYCVVYDTLTQEEKDKYGSKDYVITYCALCIKTYYAKAKMKLVNKYSVVNTL
GBSWBV_contig01801GBSWBV_00302080F104050VSSLSEQRKCIIRLRKHCVVYDALNDIEKEKYGSKDYVITYCALCIKTFYAKAKMKLVNKYSVVNTL
GBSWBV_contig01825GBSWBV_00339710F104050VVSSLSERKRCIIRLRKHCVVYEALVQDEQQKYGTRDYVITYCALCIKAFYAKAKIRLVNKYSVVNTL
GBSWBV_contig01917GBSWBV_00485100F104050VSEERKCIIRLRKYCVVYEALSDSEKEKYGSKDYVITYCALCIKTYYAKAKMKLINRYSVVNTL
GBSWBV_contig02318GBSWBV_00297680F104050LSEQRKCIIRLRKYCVVYEALNDSEKEKYGSKDYVITYCGLCIKSYYAKAKMRLVNKFSVVNTL
GBSWBV_contig02332GBSWBV_00320960F104050LSERKRCIIRLRKHCVVYDALNDIEKEKYGSKDYVITYCALCIKAFYAKAKIRLVNKYSVVNTL
GBSWBV_contig02427GBSWBV_00467380F104050VVKKALSEQKKCIIRLRKYCVVYDALNDIEKEKYGSKDYVITYCALCIKTFYAKAKMKLVNKYSVVNTL
GBSWBV_contig02437GBSWBV_00482080F104050VSEQKKCIIKLRKYCVVYEALSDSEKEKYGSKDYVITYCALCIKTYYAKAKMKLINRYSVVNTL
GBSWBV_contig02582GBSWBV_00333840F104050LSVEYKKCIIRLRKYCVVYETLTQEEQQRYGTKYYVVTYCAMCIKAFYAKAKMKLLNKYSVVNTL
GBSWBV_contig02628GBSWBV_00702950F104050VSEVKKCIIRLRKFCVVFENLVDEEKQKYGSKEFVVTYCSMCIKTYYAKAKHKLVNKFSVVNTL
GBSWBV_contig02916GBSWBV_00408570F104050MSESKKCIIRLRKYCVVFNELNSEEQQKYGTKDYVITYCAMCIKTFYAKAKMKLINKYSVVNTL
GBSWBV_contig03037GBSWBV_00600970F104050VSEQKKCIIKLRKYCVVYEALSDSEKEKYGSKDYVITYCALCIKTYYAKAKMKMINKYSVVNTL
GBSWBV_contig03096GBSWBV_00170120F104050VSEAKCIIKLRKYCAVYDSLNSEEKEKYGSKDYVITYCGLCIKTYYAKAKMRLVNKFSVVNTL
GBSWBV_contig03199GBSWBV_00038650F027047MDLSSLGIAILSAVVYSLSMYVKKHLNPDNPQSFDTVKFLTTLIWGIIVGAILQFSGLPITEQSVEEQFIAYAGLIAITENIVKAIVRALSR
GBSWBV_contig03394GBSWBV_00344380F104050VSEQKKCIIKLRKYCVVYDSLNSEEKEKYGSKDYVITYCALCIKTYYAKAKMKLINKYSVVNTL
GBSWBV_contig03836GBSWBV_00213430F104050RLRKYCVVYEALSDSEREKYGSKEFIVTFCGMCIKSYYAKAKMRLVNKFSVVNTL
GBSWBV_contig03984GBSWBV_00449650F104050VVKSKVSEQKKCIIKLRKYCVVYDSLNSEEKEKYGSKDYVITYCALCIKTYYAKAKMKLINKYSVVNTL
GBSWBV_contig04163GBSWBV_00432420F104050VSEQKKCIIKLRKYCVVYDSLNSEEKEKYGSKDYVITYCALCIKTYYAKAKMKLI
GBSWBV_contig04534GBSWBV_00438050F104050VVSSLSERKRCIIRLRKHCVVYDALNDIEKEKYGSKDYVITYCALCIKAFYAKAKIRLVNKYSVVNTL
GBSWBV_contig04736GBSWBV_00383250F027047MDLSSLGIAVLSAVVYSLSMYVKKHLNPDNPQSFDTVKFLTTLIWGIIVGAILQFSGLPITEQSVEEQFIAYAGL
GBSWBV_contig05335GBSWBV_00038760F104050VVKKALNEHKKCIIRLRKYCVVYDALNDIEKEKYGSKSYVLTYCGLCIKSYYAKAKIKLINKYSVVNTL
GBSWBV_contig05781GBSWBV_00663880F104050YNELQSSEQQKYGTKEFVITYCSMCIKAYYAKAMKLVNKYSVVNTL
GBSWBV_contig06147GBSWBV_00547570F104050CVVFENLVDEEKQKYGSKEFVVTYCSMCIKTYYAKAKHKLVNKFSVVNTL
GBSWBV_contig06576GBSWBV_00359540F104050MLENIYESDEHKCIIRLRKYCVVYDTLTQEEKDKYGSKDYVITYCALCIKTYYAKAKMKLINKYSVVNTL
GBSWBV_contig07045GBSWBV_00155230F027047IAVLSAVVYSLTMYVKKHLNPDNPQSFDTVKFLTTVFWGALIGAILNLSGIPITEQSVEEQFLTYAGLIAITENIIKAIIRTAK
GBSWBV_contig07559GBSWBV_00281680F104050VYSLLERELCEKKCIIRLRKICVVYGALVQEEQQKYGTKEFVVTYCGMCIKTYYAKSKMKLVNKYSVVNTL
GBSWBV_contig08046GBSWBV_00182230F104050VSEERKCIIRLRKYCVVYETLNDSEKEKYGGKEFIITFCGMCIKTYYAKAKMKLVNKYSVVNTL
GBSWBV_contig08420GBSWBV_00247730F104050MTLLAEREMSESKKCIIRLRKYCVVYSELSAEEQQKYGSKDYVITYCALCIKTFYAKAKMKLINKYSVVNTL
GBSWBV_contig08443GBSWBV_00655150F104050VSEERKCIIRLRKYCVVYDSLNSEEKEKYGSKDYVITYCGLCIKTYYAKAKMRLVNKFSVVNTL
GBSWBV_contig08992GBSWBV_00657990F104050DHYDTTSGEREMSESKKCIIRLRKHCVVYSELSAEEQQKYGTKDYVITYCALCIKTFYAKAKMKLVNKYSVVNTL
GBSWBV_contig09164GBSWBV_00180810F104050FNPRFWISWGLKVKKCIIRLRKICVVYEELVEEEKSKYGTREYCITYCSLCIKTYYAKAKVKLVNKFSVVNTL
GBSWBV_contig09289GBSWBV_00256530F104050VKSKVSEQKKCIIKLRKYCVVYEALSDSEKEKYGSKDYVITYCALCIKTYYAKAKMKLIN
GBSWBV_contig09295GBSWBV_00253640F104050KKCIIRLRKHCVVYETLIQEERQKYGSKEYVVTYCAMCIKAFYAKAKIKLLNKYSVVNTL
GBSWBV_contig09890GBSWBV_00331090F104050KKCIIRLRKTCVVYSELQSSEQQKYGTKEFIITYCSMCIKAYYAKAKMKLVNKYSVVNTL
GBSWBV_contig10291GBSWBV_00158290F027047MDWSGLGIAVLSAVIYSLSMYIKKHLNPNNPQSFDKAKFLTTLIWGIIIGVVLQLSGVEITERTVE
GBSWBV_contig10313GBSWBV_00227020F104050MLENIYESEEHKCIIRLRKYCVVYDTLTQEEKDKYGSKDYVITYCALCIKTYYAKAKMKLINKYSVVNTL
GBSWBV_contig10424GBSWBV_00271320F104050IIRLRKHCVVFNELNSEEQQKYGSKDYVITYCALCIKTFYAKAKMRLLNKYSVVNTL
GBSWBV_contig10523GBSWBV_00410350F104050RKFCVVFENLVDEEKQKYGTKEFVVTYCSMCIKTYYAKAKHKLVNKFSVVNTL
GBSWBV_contig10698GBSWBV_00416250F104050RLRKYCVVYDSLNSEEKEKYGSKDYVITYCSLCIKTYYAKAKMKLINKYSVVNTL
GBSWBV_contig10733GBSWBV_00448480F104050VVKKALNEHKKCIIRLRKYCVVYESLVQEERQKYGTKDYVITYCALCIKAFYAKAKIKLVNRYSVVNTL
GBSWBV_contig10799GBSWBV_00058730F104050VVSSLSERKRCIIRLRKHCVVYESLVQAEREKYGTKDYVITYCALCIKAFYAKAKIRLVNKYSVVNTL
GBSWBV_contig11967GBSWBV_00296650F104050VVKKALNEHKKCIIRLRKYCVVYESLVQEEQQKYGTKDYVITYCALCIKAFYAKAKIKLVNRYSVVNTL
GBSWBV_contig12021GBSWBV_00376220F027047MDLSSLGIAVLSAVVYSLSMYVKKHLNPDNPQSFDVTKFLTTLIWGIIVGAILQFSGLPITEQSVEEQFIAYAGLIAITENIVKAIVRALSR
GBSWBV_GG5TF7S02GW7LNGBSWBV_00063450F058176VRSAWQQFCIDTSAFRTEHIINTIGNQREYTHPLVRVSQVFLDNDELVILPEPNEYYRACAVYPNRIVLSFDPEPNQQIRIVGYGVPEIDTVYLEPATRLMDGIAMLTAYNYLIRFAEPTQIQSISLYQLEYRKIVDDFTARVVDVVRQRGGNLPVVGYVSFV
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