Sample 2077657023

Basic Information
IMG/M Taxon OID	2077657023 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0045212 \| Gp0051964 \| Ga0026317
Sample Name	Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - sample OSP_B
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Basic Information

IMG/M Taxon OID

2077657023 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0045212 | Gp0051964 | Ga0026317

Sample Name

Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - sample OSP_B

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	35803982
Sequencing Scaffolds	21
Novel Protein Genes	30
Associated Families	19

Dataset Contents

Total Genome Size

35803982

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	2
Not Available	18
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → Viruses → Predicted Viral

Not Available

All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon

Ecosystem Assignment (GOLD)
Name	Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Ecosystem Assignment (GOLD)

Name

Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Type

Environmental

Taxonomy

Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → spring water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

aquatic biome → hot spring → spring water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	One Hundred Springs Plain, Yellowstone National Park
Coordinates	Lat. (^o)	44.7315	Long. (^o)	-110.711389	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

One Hundred Springs Plain, Yellowstone National Park

Coordinates

Lat. (^o)

44.7315

Long. (^o)

-110.711389

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F018029	Metagenome / Metatranscriptome	237	Y
F056742	Metagenome / Metatranscriptome	137	Y
F061983	Metagenome / Metatranscriptome	131	Y
F063848	Metagenome / Metatranscriptome	129	N
F070317	Metagenome / Metatranscriptome	123	Y
F073767	Metagenome / Metatranscriptome	120	N
F075084	Metagenome / Metatranscriptome	119	N
F076263	Metagenome / Metatranscriptome	118	Y
F076264	Metagenome / Metatranscriptome	118	Y
F077502	Metagenome / Metatranscriptome	117	N
F080245	Metagenome	115	N
F080247	Metagenome / Metatranscriptome	115	Y
F081547	Metagenome / Metatranscriptome	114	Y
F083455	Metagenome / Metatranscriptome	113	Y
F084460	Metagenome / Metatranscriptome	112	N
F085905	Metagenome	111	N
F085906	Metagenome / Metatranscriptome	111	N
F087445	Metagenome / Metatranscriptome	110	Y
F101501	Metagenome	102	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
OSPB_contig01082	All Organisms → Viruses → Predicted Viral	3240	Open in IMG/M
OSPB_contig01365	All Organisms → Viruses → Predicted Viral	2663	Open in IMG/M
OSPB_contig01948	Not Available	1962	Open in IMG/M
OSPB_contig02322	Not Available	1686	Open in IMG/M
OSPB_contig02554	Not Available	1532	Open in IMG/M
OSPB_contig03043	Not Available	1261	Open in IMG/M
OSPB_contig03085	Not Available	1259	Open in IMG/M
OSPB_contig03850	Not Available	930	Open in IMG/M
OSPB_contig04060	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	827	Open in IMG/M
OSPB_contig04186	Not Available	950	Open in IMG/M
OSPB_contig04831	Not Available	827	Open in IMG/M
OSPB_contig05292	Not Available	761	Open in IMG/M
OSPB_contig05566	Not Available	723	Open in IMG/M
OSPB_contig06562	Not Available	610	Open in IMG/M
OSPB_contig07403	Not Available	557	Open in IMG/M
OSPB_GN81VBF01AIQPG	Not Available	528	Open in IMG/M
OSPB_GN81VBF01BTXS4	Not Available	510	Open in IMG/M
OSPB_GN81VBF01BWH30	Not Available	533	Open in IMG/M
OSPB_GN81VBF01DFFC8	Not Available	519	Open in IMG/M
OSPB_GN81VBF01DL7NS	Not Available	512	Open in IMG/M
OSPB_GN81VBF01EEU2Q	Not Available	510	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
OSPB_contig01082	OSPB_00779280	F061983	LINEEGVLSEQEFEHVKKTRIYKGMKVLEIKDLGFDSFWRFTHYYELVAVSEGGGLFDCYYSDVIDVKKLKDVGAIVVKEQDIQPVRTMKTLVAKWYNKKLVEEEKAFETCTKFIM
OSPB_contig01082	OSPB_00779290	F080247	MIVWGKTIECIIDADVNYLNGELFNSQFRVKGKFLVFGNLYTLEKTTPGGETIQICSPVDATFMAYYQGMVAVMSFYIKERDIYANVSLTDPDTIKEFMTMSTYYRKYGVSIPNILDKIMYRKVPT
OSPB_contig01082	OSPB_00779300	F076263	MPSAEDLSAILDDLEDLCARIPDGVTFHPTLEIRRHHANEEATYIKFDCRDHKYTLTIVRTGVAKTTRVSSREQLYRRLFPEYSPGYSGSYTEEFWGGE
OSPB_contig01082	OSPB_00779330	F080245	VIFVWSARVIIPGFRDEVFVSPALINMYAELTEDVYEVGMFMVPHKGHALLFLPTMVIKVDDELMKNLEQTTIEDLNIPLNTISNVFT
OSPB_contig01082	OSPB_00779350	F075084	VRPCRKDLCLLYSLGADYAKLIDFTNQNFQGKLFRAGARAMIYARRLMASWYGYDTGVLIETALRRILRRSITYCNIMRRLGLESEYCRRYTQYNGVPCDLVSVFTVETTYADILHMIVNYNSENVSKVLTKMTEMCSTYEVR
OSPB_contig01365	OSPB_00483600	F056742	VKLADCRYKCKQTYFRRSLFVRMFITEVEKVYQVKINSCEDFCKFYVLFLSVAEMLYGKHYNYAIFKAITRGRPNLYMCLKCNSTLTAEESVTHTLQHMRQLGYKPLTYEENI
OSPB_contig01948	OSPB_00628050	F076264	MVNGLQSLFVALIDVFSNAVNAIGNTLASLANPIGYLVGVLAVFGSLISIIYYVFRGKGGVGGLVSGIRSVFTSFF
OSPB_contig01948	OSPB_00628080	F087445	MSASSSKPTDELVQRLLNMSEYDLKRVFKMIPIDKRLALALDTIQEYQSIQNKFNNLLNGLAMNAPRVKEVVENARRNRKPIDRLADMFMDMMETMLKSKAMSLTDEDKAKLKEKLKEVMESEE
OSPB_contig02322	OSPB_00399390	F063848	VAKKKRSVHDPTLSVIHYQEQLDKMSKAFEKSSTRRNQRAVNGFTVLKQVQNTVRDYLNEVSASMKAPVIAQLAVEFIGIAMAYLKGSNEGYNSYALTGRVAQIATLRATHIVHATTLTCAQVGEIINGMLKKLSGVTADPLTFTENDGVCEAKVANPLIKLSVASAGTGLTVALTDILKAKTPEEVLMAK
OSPB_contig02322	OSPB_00399420	F087445	RLLNMSEYDLKRVFKMIPIDKRLALALDTIQEYQSIQNKFNNLLNGLAMNAPRVKEVVENARRNRKPIDRLADMFMDMMETMLKSKAMSLTDEDKAKLKEKLKEVMESEE
OSPB_contig02554	OSPB_00650410	F070317	MSAMEELKELNLERIVKDAQEGEVCVVNKILKGKLTDLMPLIKDPASLSQKAMEFIQNRGDDIFYLFQCTTRGGRNVKLLVRQSFDPRSTFYQLMKKYKTIKVGDEVNVFYNPEKRRYDFLL
OSPB_contig03043	OSPB_00209720	F075084	MRPCRKDLCLIYSLGVDYAKLMDFTSQNPTGKLFRRAGVAMVYARRLSASWYGYDTGVLLKRSLRRILRWSINYCRIMRELGLESEYCRRYTVYDEVPCERVSEYDVEVAYSRIIHMIANYNSETVSKLLTKMTEECSTYEVRG
OSPB_contig03043	OSPB_00209740	F080245	RGDKAMIFVWSARVIIPGFRDEVFVSPALINRYAELTEDVYEVGMFMVPHRGHALLFLPTMVIKVDDELMKNLEQTSIEDLNIPLNTISNVFT
OSPB_contig03085	OSPB_00742660	F063848	MAKKRRSVHDPMLSVIHYQEQLEKMAKAYEKSATRRNQRAVNGFSILKQVQETVRDYLNQASEAMKKPIIAQLSVEFLGVAMAYLKASNEGFSSYALTGRVAQIATLKATGIVNGTELTCAQVGEIINGMLKKVSGMTADPLTFTENDGICEATPANPMPKLSIASPSTGYTVSMNDILKAKSPEEVLMGK
OSPB_contig03850	OSPB_00203170	F085906	KTKYCHMSEGLILDNLTSFLENFKGEFQSQVRQIGDGIYEEIGMLKVYLPGENGGRVMGEYNVHAVIYDVVQVIRLDGRYYDMSDDRWHTVSLLLVFKYNELLDETFLQVGNGAMIYGQRVRRPYW
OSPB_contig04060	OSPB_00282220	F084460	VSQINPDDLLKRIDEIVNKAIAKHLAEMSRQYTPQEINIKFTKNWILVFLPNGYLKISKKLSEGSYKLKILQYK
OSPB_contig04186	OSPB_00013650	F087445	RSGVASYEENLRRLAQMSASPVKPGDELIQRLLNMSEYDLKRVFKMIPIDKRLMLALDTIQEYQNLRSKFDNLFNAFAMNSPKVKEVMENAKKNRKPLDRLADMFMDLIETMLKSKAMTLTDEDREKLREKVREMIESEE
OSPB_contig04831	OSPB_00274590	F077502	QVTDVAHIILWIEKNLPEEGKLSELIDNVFSLITEIILNNLSQGKQPISFESVREIADAFKEIVYRSIEQSTGTLTEDVKEQVDAYFFKKLSEIYSKYYE
OSPB_contig05292	OSPB_00123000	F085905	MLYAVATGIWVINLMDDVDIAETGTEKNFEYGLIYVYSNSRIDSLFIVALTHYFNVKREREYYRSIPMDALQNVMKSLVDFMNDKLKILDKLKEKIDERVVLMMWNQLYIFVMGFLYGLYGRDAEAVFQGVMARYLLPYSVLEVIRRHLKK
OSPB_contig05566	OSPB_00717890	F073767	MVSKRTEDILTVVGVLGALGIGGYAVYRLVTSITSPITNPASAGCTTPGTPCYSAIQPELNALQGCTNEYMSLLNTYLEEDNKAGTSITQAQQANLNYIMNSCIIPLQRQLSKNLQPY
OSPB_contig06562	OSPB_00741080	F018029	MKYLWQIVRKLHDKDELNEEEMRDLIDYLNVLKEGLQKLRIILYMDYLGYIADFDVVFKEPWYCSEVHFKCLQVEGGCGFLSLDDFIWRIFTDQIEVKPFISEVTHT
OSPB_contig07403	OSPB_00655220	F083455	MMHMDLFSYQLGISSLWAKDFIVALLGIALAVSLTLANKKGESLLIQSTMMMPVAFAIHALPHINYISLNTIFDYGIIATGISLVLDYITTRAERPDLKYRFINMYILLTLYAIIKYQSDVLKFMLNSVLMTIVFALITYIP
OSPB_GN81VBF01AIQPG	OSPB_00580500	F081547	MPYLRGVFVNFGEETYYLSCGVVNGGNLDTETYTINQPDLMMVRMGRDLYVVTSELKLLIPVEPVKVLLNSETSKVY
OSPB_GN81VBF01AIQPG	OSPB_00580510	F076263	LDDLEDICARIPEGVTFHPTLEIHRKHANEEATYIKFDCRNHKYTLTTVRTGVAKTTRVSSREELFRRLFPEYPPGYSEEIWGGE
OSPB_GN81VBF01BTXS4	OSPB_00229350	F080247	MIVWGKLIECLLDTDVNYLNGELFSNPLRIKGKFLVFGNLYTFERTISETGTEQVCVPIDATFMAYYEGMVAIMSFYLKEREMYANISLTDPETIKGFVNMSSFYKKYGISIPNVLDKIMYRKVPT
OSPB_GN81VBF01BWH30	OSPB_00333140	F081547	MSYLRGVFVNFGEETYYLSCGIVKGGTLDPETYTVNNPELMMVRLGRDLYIVTNDMKQLIPIEPIRQLLASETSKVYNEAMAQGNEVKPI
OSPB_GN81VBF01DFFC8	OSPB_00319170	F101501	SIGTIKSIVGGRFHGEYIGYRLDPIPFIIIRVGDSLLEVPIMLFKPILEKAYRVLEDYEKRRLLAYEASGIFKTHPYQAQLLILDAIQLSQLLGIRDAGALVRTLLEHPLSQERAGMIGRRGVEWLVRAMIEVGLLAF
OSPB_GN81VBF01DL7NS	OSPB_00639620	F076263	DDLEDLCARLPEGVTFHPTLELRRNYANEEATYIKFDCRNHRYVLTIVREGVAKTTRYSSREELFRRLFPDYMGEGII
OSPB_GN81VBF01DL7NS	OSPB_00639630	F081547	MSYLRGVFVNFGEETYYLSCGIVKGGTLDPETYTVNNPELMMVRLGRDLYIVTNDMKQLIPIEPIRQLLASETSKVYNEAMHRVTR
OSPB_GN81VBF01EEU2Q	OSPB_00205030	F085905	LKYFTDPMLYAVATGIWVINLMDDVDIAETGTQKDFEYGLIYVYSNSRVDTLFIVALTHYFNVKREREYYRSIPMDALQSVMKSLVDFMNDKLKILDKLKEKIDERVVLMMWNQLYVFVMGFLYGLYGRDAEAVFQGVVARHLLPYSVLEVIRRHTREMISVVTVGHPPW

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

2077657023: Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - sample OSP_B

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences