Sample 2124908015

Overview

Basic Information
IMG/M Taxon OID	2124908015 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046825 \| Gp0052290 \| Ga0011164
Sample Name	Tongue_dorsum_contig300
Sequencing Status	Permanent Draft
Sequencing Center	Los Alamos National Laboratory
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	406291643
Sequencing Scaffolds	7
Novel Protein Genes	7
Associated Families	5

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	3
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → Porphyromonas	2
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Tongue Microbial Communities From Los Alamos National Lab, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Oral Cavity → Unclassified → Human Tongue → Human Tongue Microbial Communities From Los Alamos National Lab, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal secretion

Location Information
Location	Houston, TX
Coordinates	Lat. (^o)	29.774	Long. (^o)	-95.361032	Alt. (m)	N/A	Depth (m)	95.383
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F032313	Metagenome	180	N
F051213	Metagenome	144	N
F089055	Metagenome	109	Y
F094007	Metagenome	106	N
F105376	Metagenome	100	N

Family

Category

Number of Sequences

3D Structure?

F032313

Metagenome

180

F051213

Metagenome

144

F089055

Metagenome

109

F094007

Metagenome

106

F105376

Metagenome

100

Scaffold	Taxonomy	Length	IMG/M Link
t454_GJGVOYN01BKKO0	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	523	Open in IMG/M
t454_GJGVOYN01BVNEF	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → Porphyromonas	513	Open in IMG/M
t454_GJGVOYN01C0G2I	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → Porphyromonas	505	Open in IMG/M
t454_GJGVOYN01C9DRZ	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	501	Open in IMG/M
t454_GJGVOYN01CB9W4	Not Available	502	Open in IMG/M
t454_GJGVOYN01CBAVO	Not Available	507	Open in IMG/M
t454_GJGVOYN01EDBLH	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria	550	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

t454_GJGVOYN01BKKO0

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria

523

Open in IMG/M

t454_GJGVOYN01BVNEF

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → Porphyromonas

513

Open in IMG/M

t454_GJGVOYN01C0G2I

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Porphyromonadaceae → Porphyromonas

505

Open in IMG/M

t454_GJGVOYN01C9DRZ

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria

501

Open in IMG/M

t454_GJGVOYN01CB9W4

Not Available

502

Open in IMG/M

t454_GJGVOYN01CBAVO

Not Available

507

Open in IMG/M

t454_GJGVOYN01EDBLH

All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria

550

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
t454_GJGVOYN01BKKO0	t454_01797880	F089055	LKVEKMNSTPECVTKTPEIEAREKLAAIFSDAEQRGDNSKVSPELGKTAFDIENTSKMDSADNGAVDFCNQALGSYGKSLDYINNSPLETVQAIGNSLQLFREDKTKESCK
t454_GJGVOYN01BVNEF	t454_03865640	F051213	LLWAVVMALTFVLTSCDPFSKNEPTIEGDRYKYFDSSAQRQSFRVVNGSGKQYNHKVDWHIIGIQEENSDTYLTKKVDTLSNGDFRISYDWVTFTVKENKSVIDVEVQKNETGKDRSVFFATSNSYKQAYLPNMIVTQRAK
t454_GJGVOYN01C0G2I	t454_06608590	F051213	SKLLWAVVMALTFVLTSCDPFSKNEPTIEGDRYKYFDSSAQRQSFRVVNGSGKQYNHKVDWHIIGIQEENSDTYLTKKVDTLSNGDFRISYDWVTFTVKENKSVIDVEVQKNETGKDRSVFFATSNSYKQAYLPNMIVTQRAK
t454_GJGVOYN01C9DRZ	t454_02368440	F094007	LLDRTERALLYVVDSDGNVVPLDYLGEDFVPDANSYSDEDFTKRNRIIVEMCDLFGGIRRRAGFAERHRGRGDYDRARRIERNRGSDISEVGRLAISACEACPLKLDCELYGKLGGAVLSDVLNYKKVRTAISLTKAGKKRSGWNKGCIDNNA
t454_GJGVOYN01CB9W4	t454_04364770	F105376	TTQDKEVISKRVWRRWGRDVIHIKESVDRHTITLERIENIARANVTQAQLKTYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELQEEVQQTVRRK
t454_GJGVOYN01CBAVO	t454_05016840	F032313	DNDTPQEKPREQEKHEVPVPKPKPQFDEVGERIWYGRTPAMRLDSTDYGAGLTSVFGMRTSSIPKQRFDSLFKQTVWEIKDICAVETDLSLAKKIPKFVGGSITKEFTCRNGVILRHMQGIDINLVDTVNYVYNEDLNEIVLEGTGIRWYVLRLNNMQSNFC
t454_GJGVOYN01EDBLH	t454_05761730	F089055	MSSTPECVTKTPEIEAREKLAAIFSDAEQRDNSKVNPELGKTAFDVANIPNNEAVYLCNQTLGSYGKSLDRINKNPLEVVQTIGTSLQHLRDEYKTEESCR

Scaffold ID

Protein ID

Family

Sequence

t454_GJGVOYN01BKKO0

t454_01797880

F089055

LKVEKMNSTPECVTKTPEIEAREKLAAIFSDAEQRGDNSKVSPELGKTAFDIENTSKMDSADNGAVDFCNQALGSYGKSLDYINNSPLETVQAIGNSLQLFREDKTKESCK

t454_GJGVOYN01BVNEF

t454_03865640

F051213

LLWAVVMALTFVLTSCDPFSKNEPTIEGDRYKYFDSSAQRQSFRVVNGSGKQYNHKVDWHIIGIQEENSDTYLTKKVDTLSNGDFRISYDWVTFTVKENKSVIDVEVQKNETGKDRSVFFATSNSYKQAYLPNMIVTQRAK

t454_GJGVOYN01C0G2I

t454_06608590

F051213

SKLLWAVVMALTFVLTSCDPFSKNEPTIEGDRYKYFDSSAQRQSFRVVNGSGKQYNHKVDWHIIGIQEENSDTYLTKKVDTLSNGDFRISYDWVTFTVKENKSVIDVEVQKNETGKDRSVFFATSNSYKQAYLPNMIVTQRAK

t454_GJGVOYN01C9DRZ

t454_02368440

F094007

LLDRTERALLYVVDSDGNVVPLDYLGEDFVPDANSYSDEDFTKRNRIIVEMCDLFGGIRRRAGFAERHRGRGDYDRARRIERNRGSDISEVGRLAISACEACPLKLDCELYGKLGGAVLSDVLNYKKVRTAISLTKAGKKRSGWNKGCIDNNA

t454_GJGVOYN01CB9W4

t454_04364770

F105376

TTQDKEVISKRVWRRWGRDVIHIKESVDRHTITLERIENIARANVTQAQLKTYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELQEEVQQTVRRK

t454_GJGVOYN01CBAVO

t454_05016840

F032313

DNDTPQEKPREQEKHEVPVPKPKPQFDEVGERIWYGRTPAMRLDSTDYGAGLTSVFGMRTSSIPKQRFDSLFKQTVWEIKDICAVETDLSLAKKIPKFVGGSITKEFTCRNGVILRHMQGIDINLVDTVNYVYNEDLNEIVLEGTGIRWYVLRLNNMQSNFC

t454_GJGVOYN01EDBLH

t454_05761730

F089055

MSSTPECVTKTPEIEAREKLAAIFSDAEQRDNSKVNPELGKTAFDVANIPNNEAVYLCNQTLGSYGKSLDRINKNPLEVVQTIGTSLQHLRDEYKTEESCR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

2124908015: Tongue_dorsum_contig300

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences