Sample 3300000206

3300000206: Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters

Overview

Basic Information
IMG/M Taxon OID	3300000206 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0054941 \| Gp0051880 \| Ga0010845
Sample Name	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters
Sequencing Status	Permanent Draft
Sequencing Center	University of Minnesota
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	276241763
Sequencing Scaffolds	76
Novel Protein Genes	93
Associated Families	92

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16
All Organisms → Viruses → Predicted Viral	7
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1
Not Available	35
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	6
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetes incertae sedis → ac1 cluster → Actinobacteria bacterium BACL15 MAG-120619-bin91	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Lotic Microbial Communities From Mississippi River At Two Locations In The State Of Minnesota
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic → Lotic Microbial Communities From Mississippi River At Two Locations In The State Of Minnesota

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → surface water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Solway, Minnesota
Coordinates	Lat. (^o)	47.349634	Long. (^o)	-95.182806	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000166	Metagenome / Metatranscriptome	1810	Y
F000311	Metagenome / Metatranscriptome	1326	Y
F000403	Metagenome / Metatranscriptome	1177	Y
F001094	Metagenome / Metatranscriptome	780	Y
F001562	Metagenome / Metatranscriptome	670	Y
F001706	Metagenome / Metatranscriptome	648	Y
F001754	Metagenome / Metatranscriptome	641	Y
F001799	Metagenome / Metatranscriptome	632	Y
F002130	Metagenome / Metatranscriptome	591	Y
F002398	Metagenome / Metatranscriptome	563	Y
F002406	Metagenome	562	Y
F002487	Metagenome / Metatranscriptome	554	Y
F004669	Metagenome	428	N
F005000	Metagenome / Metatranscriptome	415	Y
F005295	Metagenome / Metatranscriptome	405	Y
F005531	Metagenome / Metatranscriptome	397	Y
F005780	Metagenome / Metatranscriptome	390	Y
F005909	Metagenome / Metatranscriptome	386	Y
F006220	Metagenome	378	Y
F007113	Metagenome / Metatranscriptome	357	Y
F007203	Metagenome / Metatranscriptome	356	Y
F007310	Metagenome	353	Y
F009056	Metagenome / Metatranscriptome	323	Y
F009266	Metagenome / Metatranscriptome	320	Y
F009948	Metagenome / Metatranscriptome	310	Y
F010161	Metagenome	307	N
F010833	Metagenome	298	Y
F013485	Metagenome / Metatranscriptome	271	Y
F014142	Metagenome / Metatranscriptome	265	Y
F014494	Metagenome / Metatranscriptome	262	Y
F015868	Metagenome / Metatranscriptome	251	Y
F016124	Metagenome / Metatranscriptome	249	Y
F017479	Metagenome / Metatranscriptome	240	Y
F017792	Metagenome / Metatranscriptome	238	Y
F018702	Metagenome / Metatranscriptome	233	Y
F018927	Metagenome	232	Y
F019798	Metagenome / Metatranscriptome	227	N
F020348	Metagenome	224	N
F023349	Metagenome	210	N
F024112	Metagenome	207	Y
F024557	Metagenome	205	Y
F024931	Metagenome	204	N
F025224	Metagenome / Metatranscriptome	202	Y
F025481	Metagenome	201	Y
F028490	Metagenome / Metatranscriptome	191	Y
F029288	Metagenome / Metatranscriptome	189	Y
F029371	Metagenome / Metatranscriptome	188	Y
F030374	Metagenome	185	N
F035740	Metagenome / Metatranscriptome	171	N
F037937	Metagenome / Metatranscriptome	167	N
F039139	Metagenome	164	N
F039485	Metagenome / Metatranscriptome	163	N
F040524	Metagenome	161	Y
F041728	Metagenome / Metatranscriptome	159	Y
F041757	Metagenome / Metatranscriptome	159	Y
F043361	Metagenome / Metatranscriptome	156	Y
F043399	Metagenome	156	N
F046239	Metagenome / Metatranscriptome	151	Y
F048265	Metagenome / Metatranscriptome	148	Y
F048948	Metagenome	147	N
F053301	Metagenome / Metatranscriptome	141	N
F054860	Metagenome	139	N
F055495	Metagenome / Metatranscriptome	138	N
F058713	Metagenome / Metatranscriptome	134	N
F060868	Metagenome / Metatranscriptome	132	Y
F060908	Metagenome / Metatranscriptome	132	Y
F062705	Metagenome / Metatranscriptome	130	Y
F063208	Metagenome	130	Y
F063685	Metagenome / Metatranscriptome	129	Y
F063703	Metagenome / Metatranscriptome	129	N
F064666	Metagenome	128	Y
F070855	Metagenome	122	Y
F072281	Metagenome / Metatranscriptome	121	Y
F073269	Metagenome / Metatranscriptome	120	Y
F074873	Metagenome / Metatranscriptome	119	Y
F075744	Metagenome	118	N
F081266	Metagenome	114	N
F083710	Metagenome / Metatranscriptome	112	N
F083937	Metagenome / Metatranscriptome	112	Y
F084128	Metagenome / Metatranscriptome	112	Y
F085149	Metagenome / Metatranscriptome	111	Y
F088870	Metagenome	109	N
F091360	Metagenome / Metatranscriptome	107	Y
F093349	Metagenome	106	N
F095470	Metagenome	105	N
F098904	Metagenome	103	Y
F100477	Metagenome	102	N
F100655	Metagenome	102	N
F102568	Metagenome / Metatranscriptome	101	Y
F102628	Metagenome	101	N
F104436	Metagenome	100	N
F105050	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
M3P_c10000003	All Organisms → cellular organisms → Bacteria	19567	Open in IMG/M
M3P_c10000005	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18160	Open in IMG/M
M3P_c10000054	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7039	Open in IMG/M
M3P_c10000271	All Organisms → Viruses → Predicted Viral	4023	Open in IMG/M
M3P_c10000315	All Organisms → Viruses → Predicted Viral	3773	Open in IMG/M
M3P_c10000356	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3638	Open in IMG/M
M3P_c10000987	All Organisms → Viruses → Predicted Viral	2574	Open in IMG/M
M3P_c10001291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2357	Open in IMG/M
M3P_c10001458	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2276	Open in IMG/M
M3P_c10001888	All Organisms → Viruses → Predicted Viral	2106	Open in IMG/M
M3P_c10001926	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2096	Open in IMG/M
M3P_c10002065	All Organisms → Viruses → Predicted Viral	2057	Open in IMG/M
M3P_c10003913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1682	Open in IMG/M
M3P_c10005560	Not Available	1495	Open in IMG/M
M3P_c10005755	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1477	Open in IMG/M
M3P_c10005930	All Organisms → Viruses → Predicted Viral	1463	Open in IMG/M
M3P_c10006750	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1401	Open in IMG/M
M3P_c10006914	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1389	Open in IMG/M
M3P_c10007021	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1382	Open in IMG/M
M3P_c10007768	Not Available	1335	Open in IMG/M
M3P_c10009157	Not Available	1261	Open in IMG/M
M3P_c10010384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1206	Open in IMG/M
M3P_c10011824	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1151	Open in IMG/M
M3P_c10011985	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
M3P_c10012921	Not Available	1116	Open in IMG/M
M3P_c10016981	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
M3P_c10018272	Not Available	980	Open in IMG/M
M3P_c10019032	Not Available	964	Open in IMG/M
M3P_c10020952	Not Available	929	Open in IMG/M
M3P_c10025209	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
M3P_c10025325	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	862	Open in IMG/M
M3P_c10026347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	848	Open in IMG/M
M3P_c10026368	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	847	Open in IMG/M
M3P_c10026672	Not Available	843	Open in IMG/M
M3P_c10027570	Not Available	831	Open in IMG/M
M3P_c10028529	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	820	Open in IMG/M
M3P_c10028971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
M3P_c10031129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
M3P_c10031747	Not Available	785	Open in IMG/M
M3P_c10032622	Not Available	776	Open in IMG/M
M3P_c10033147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	771	Open in IMG/M
M3P_c10034105	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	762	Open in IMG/M
M3P_c10034520	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → unclassified Nitrososphaeria → Nitrososphaeria archaeon	758	Open in IMG/M
M3P_c10034584	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	758	Open in IMG/M
M3P_c10034819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	755	Open in IMG/M
M3P_c10036178	Not Available	743	Open in IMG/M
M3P_c10037716	Not Available	730	Open in IMG/M
M3P_c10039336	Not Available	718	Open in IMG/M
M3P_c10041224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	703	Open in IMG/M
M3P_c10043082	Not Available	689	Open in IMG/M
M3P_c10043250	Not Available	688	Open in IMG/M
M3P_c10044568	Not Available	679	Open in IMG/M
M3P_c10045139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	676	Open in IMG/M
M3P_c10046842	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	665	Open in IMG/M
M3P_c10047014	Not Available	664	Open in IMG/M
M3P_c10049282	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	650	Open in IMG/M
M3P_c10052057	Not Available	634	Open in IMG/M
M3P_c10055484	Not Available	615	Open in IMG/M
M3P_c10055625	Not Available	615	Open in IMG/M
M3P_c10056191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	612	Open in IMG/M
M3P_c10060293	Not Available	593	Open in IMG/M
M3P_c10060412	Not Available	592	Open in IMG/M
M3P_c10061664	Not Available	587	Open in IMG/M
M3P_c10063518	Not Available	578	Open in IMG/M
M3P_c10065016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetes incertae sedis → ac1 cluster → Actinobacteria bacterium BACL15 MAG-120619-bin91	572	Open in IMG/M
M3P_c10067086	Not Available	564	Open in IMG/M
M3P_c10067422	Not Available	562	Open in IMG/M
M3P_c10073006	Not Available	541	Open in IMG/M
M3P_c10074071	Not Available	537	Open in IMG/M
M3P_c10074526	Not Available	535	Open in IMG/M
M3P_c10074891	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	534	Open in IMG/M
M3P_c10076050	Not Available	530	Open in IMG/M
M3P_c10080412	Not Available	515	Open in IMG/M
M3P_c10081814	Not Available	511	Open in IMG/M
M3P_c10083189	Not Available	507	Open in IMG/M
M3P_c10083401	Not Available	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
M3P_c10000003	M3P_1000000323	F070855	MKHHKYHYHPQVKAAKLNARAEAALGFLLAIAIGIGLAACLFFGLSA*
M3P_c10000005	M3P_1000000515	F002130	MSDKPESIVDKVLAYVDSPFKLFAVLLMGFVAFAGYFLWQNQDFMRDAYKESKKLPEINTTRADDASAMLFKKTNATVVAVFKVNPLFGSRVLYKAYTKDGRDKSIEDIDVGLFSQNSANNADIIKLMTNEIPCSEYRYAQSEVGLWYLDKGVTFTCRVSVPPDSHRFVGQITVGWAEQPQDLAQVKFMLEIASAMLTKRGN*
M3P_c10000054	M3P_1000005412	F002487	MTREDAIKDLQGEYCCYCANPKRSGSCCGENHFVPFEDLYEEDKEAMIEEYLSKGK*
M3P_c10000054	M3P_1000005413	F063703	MQTEQLRRKARQLYNNKLVSQEVNQYNQRKWVRSVLQLGDKWLVAKPIERIQ*
M3P_c10000054	M3P_100000545	F000166	MANIPTQQDAELFAKSVKKWQQVLSLGDWRIEKGTKPAKQAMASVEFNESARLAVYRLGDFGAEKITPESLDKTALHELLHIFLHDLMVVATDPKSSDEDIEMQEHRVINLLENLIFKDSHGRT*
M3P_c10000271	M3P_100002713	F029371	MITLEQKLVALCAVLPVLADFIEDLNDQSVFRQGLKNKANMLLQEIDKVDRAILRIDEPNAEKIWSEQVDLQRAFRQWIAENINV*
M3P_c10000315	M3P_100003153	F007203	MDCVMYVERQGVNLSPKIKELETRLEMLENVVKALQLEKPRMGRPPKDKHGTERVEVNTTGRD*
M3P_c10000356	M3P_100003564	F010833	VSNLNAVIGSQETKTQKKLVKIYEKVKQHHEDYQAEVEILRLDNAQTDDKDCLLLDEKGNYKFSKEGIKKLTKDIDALNDKEFDFQIINVVNPQGLEDFTFLQDWTTGIEFNKQEEEEL*
M3P_c10000987	M3P_100009873	F060868	MANWTFTTPYVLEGPSGGHRLFYFAKLRKGITIIKLDGEYFQTRYPVDEDLTEYQAVYRGGYNHTVDDATKAELIAGGVDVTEANFIAQ*
M3P_c10000987	M3P_100009874	F001706	MGLHQIRTHPEYVEGCFGCKAVSLELGTGDATRDISDKKWNSELQAYRDAKAQGIQPGGTSRAHVEAAYAASVTLGTAYNSETMPKAHQITKKTAEVMKEIGQV*
M3P_c10001291	M3P_100012915	F058713	MRGNDCDTVICYKHQAADELRKAGYRVSRDTSWVKLSQALRNFAPGCDAPDPRRPQPVICEADQRILECMYGKAKDTSMAEMIHLHGVTFRRLRDLGYREIHARSTPQTIASTLESYLLGSVEGETQSDRVLTFRSYILTTLAKDAKAGRKARKEAEPDERAEGHRKEAMRMLARIGVTEAETATPRRLRNLFYHHFPSYMWSTDCPPDLIDDDIIWPRTLRSGKDSWKV*
M3P_c10001458	M3P_100014582	F084128	NVIGGMIGKQMFGDVPLALQKVTAPMNWLYNGTDDAIRELLVDAMLDPKLAATLMKKASVMTVEPLNRELQRKALALGYGAAFGLTE*
M3P_c10001888	M3P_100018883	F001799	MDKHLLAQWAKNLLNDDFFKEVIDNLKKEQISVIINTNASEVDKREDAYRHIRTLELITGHLEGLASETAIRDKKWKIL*
M3P_c10001926	M3P_100019262	F015868	MPSIVTASQLRTVLGVSVSLYSDSYLDEIINTSEAVILPMLVANTSAVQSYKLESNVATYYTQRAHHFVAGQSVIVTGLPAPFSATITVVTVGEYYFTAALTSTNVTLREIIPTGTATLSGYSAADIYATSAPIESAILAVSVEVFQSRVAAGGQIEGVDFTS
M3P_c10002065	M3P_100020654	F048948	MRKLNAIWLLLTHKAYFLAVCKTGKNGDDMTTIGHYTYAMAETLINKHIADVDTYFDQEDALDEANDIINGIL*
M3P_c10003913	M3P_100039133	F035740	MKPLLLALTLLVSTFAITPEAVAAKRPCSALKTDIQKMLDASYSGSEADATREYARRVVKAYQMGFTNKNCLTSKEYNGLLTGVTQIRDDCSKARLEKTTWKDVSKRCNIYKVLYKYVQVAP*
M3P_c10005560	M3P_100055602	F054860	LNISLKNTRINYHNSEETVAFNALLCNEKIPFAEVSNDGRGGENRYRPLGDSMDWIFNHALVTAFREWCSNQPPVYDKESGNTYNFSADLYVNDCLIQETGSQQELVVSL*
M3P_c10005560	M3P_100055604	F053301	MTVREVIDLLESIAQKEGDQTECIVEIEEENYNTEAEIHTVCTNGYQDGTKKICLLGTKDIEADEE*
M3P_c10005560	M3P_100055605	F100477	MMKSIQLSSIKKKIGAENFSVLRETILKSSLDNPCKGMTLQRDRVVNSIKDPQIKKSLENLTSKVDWLVVDVV*
M3P_c10005755	M3P_100057552	F001094	MNKKKLEAIASTYLRAAIASVIALYLAGVTEPKALLSAAVAAVAGPLLKALDTNSTEFGITKK*
M3P_c10005755	M3P_100057553	F098904	MSNFIQTFAASLLGITTFYLVEALYYDIKARVRGKQYTLYLEELEEELER*
M3P_c10005930	M3P_100059302	F014494	MATKHFECQECGAYGKIVLKSEERLDDIVYCPVCSGDIYEEDDDIEEE*
M3P_c10006750	M3P_100067501	F013485	GNLGQTITTTLHDAADATAQAAFYLSLRANPQPIFSQITFDLTNPELDNSDRDNLIGIFMGEAIALNNLPLNMNAGAFQGFVEGWSFQASYNQLSVTLLVSPLAYSLQAMQWNDVPITETWASVSPTLEWQYATIVA*
M3P_c10006914	M3P_100069143	F095470	MKKVIWVASESENWHLYRHFEPIIEDVTGFNFKEDLCSETVKYMAKRFSETPYQRRFRSIFSIYQDDYKALVEKFIKQAENNAKIEVK*
M3P_c10006914	M3P_100069144	F093349	MSTVVKYIFKRYTSGMEIFEALLLMADIKKSAHNKNHSLENFTVDSQVKFSSKCKICKKTVTVDLEAELPVSGEVLFIDCQKPERKKKIQISS*
M3P_c10007021	M3P_100070213	F060908	MTRKLDYTISETISARSKNRIHVPKKYIKYIGMNPGFVAHVTNLNGAFIVSACPTPESKKFMVDKDGAVRFFGNDSKYKIMIADNVVVLNEYVP*
M3P_c10007021	M3P_100070214	F039139	MFLNSFEFTTEDITTILRAHDTDISIQELVEISDALDYDSIARTALMFDDTELQTQAALSHAEDLMIMDGLWITEPKRFQMP*
M3P_c10007768	M3P_100077682	F025224	MADAMWMSGSFFDNVDKFANSLGYQNAGVVMELAMMSWNSPEERDAFITSITNAEVQGGTEKNYIKRKY*
M3P_c10007768	M3P_100077683	F028490	GNYTGFAYGQNQAINQQRVEGNQAVASTQALAPSGDPYDGIDMPQLGTLFDPTTRPNEPITAGVDFGAGPGSEALPKNLTNDSRMDENARIAQEYLPDLAFAAQSPNAPDSFKRFVNYLIENARGFNNNG*
M3P_c10009157	M3P_100091571	F020348	MEIEHRKFLDDHVGNWHTVQNGYVRNIDLDILKMYEHIYRKYMSADFILTVWCPHCIFDMIKRLYEWYELQPKPKNKKNG*
M3P_c10010384	M3P_100103843	F025481	MTHLTTYQMFQYQRYGNILIDGSRSTSNPYDPALLPKNYDYEDDDYTFTRWVENNAELELLKNEVYED*
M3P_c10011824	M3P_100118242	F024931	LVLRGLQVKMTLTRNEEVTCLKAAIEFTVNGTQDANHRQFHNQQMQYYEFIVEWAEAIGSEWVVAKYFGLHFDPFEPKFKHKADVGNAIEVKWTKYVAGQLIVHEYDRPNDIAVLVTGQAPHYFIAGWIPIAMAQRPKYRHSKQPNWWVTQINLQPIENLRKSNYGHSAI*
M3P_c10011824	M3P_100118243	F000403	MSDYVEIIYPQSMTAKLLQNGEVVAEYKIEQCDKCSKLTKFDPFGFQTGYNQREKVIWFCAVCR*
M3P_c10011985	M3P_100119851	F009056	MKPVAKKATPAAIAVLRQATALRPKRKKASDGLLPSAAHINQNP
M3P_c10012921	M3P_100129212	F091360	VEQKAAAIQVTGDGHGHREFGNRTFGHRELAPSFRRLKAEGLTPERLTTEAVTRNLE*
M3P_c10016981	M3P_100169813	F023349	MKHVLYEVTSDFDIIIKLSFENYSYLNAFIEQHTADKKYEPKFLVLEVNDEGDIDFIRTYNGTKEVSKKYVVDYID*
M3P_c10018272	M3P_100182721	F081266	ISADINWWPAQLDTLNYSGKDEYLKRIAAGTCQAEFHGGPNTFWSFSFRESNCVTNVGFKQVPAHEYTHYAQAVLSNSLSSQKPRVPWMEEGLASFIGGALGTHSDMGSDLRISWAMDLRSNQAPLDFFSKAERSVYESPKWGEIYPVGAIALEGLVALVGIDGVLTYYSAIKEGLTADQSMVKAFGLTVSNAAKLLDSYVDSVRMKNDWSLEKLQSEWESAKKR*
M3P_c10019032	M3P_100190322	F083937	MGKTYHKQPSQYDDEKPSGRSGKHSNNRKGGGMRTLNSYVEEDYDLEDDTFDEYIEIDDEISIQHIKKR*
M3P_c10020952	M3P_100209523	F073269	MKKILLILLLTASTAHAQWKPDRADYEVLNDGNFYTTAHDMQTAIAIALNTLEYNHAKMHTVDVNRKDIDAPIFAHFHQPEKIDTVLISYVARTKTGYVIWFRTLPDEPISFEEEYMILEYEGPK*
M3P_c10024833	M3P_100248332	F019798	MTTLVAIQGDGWSVLGCDSRLSDEHGRFQIAKTPKIVENNGVLIAGCGSSRASNVLHYGYKQPKPTVQEDLNTYMTQRFIPAMRKSFVDAGIDMKEDGDVAQIDGGFLISVKGQVFSVSEDYSWDTDVRNVYVMGSGGDVALGALAALGVEKVKTINQAETMVRKAIAIAIQYDNMCSEPIHIFKQFK*
M3P_c10025209	M3P_100252091	F083710	IEAAAPRVAMDMQMAKMAEKAKQQERPMKAKEVPLPPPAKENVKVETAPAVNIYNSKGIVAKL*
M3P_c10025325	M3P_100253253	F005295	KQSLYEWFVSHPRKLTEWEGFSKKSAQNLLYRSLRNQALDYCQYWKAKSLGYETSDLFFYDADIVEALLPAVLRGDITEAPVLNLGMPGKPSAPAEGGNMMAMMAEIKAAYLKLSTED*
M3P_c10026347	M3P_100263472	F002398	MFPLVSIFLLASVNPIKNFVSLKTYISENAKIHCQVYFIDEDIPDFPRVNILEKSKDDFFIYLDSIGVEHKRLGTYYFFKKK*
M3P_c10026368	M3P_100263681	F006220	MMKKFKKFIEELAIASGTEMMRASQMRTTTFKDKSKYSRKAKHKNRQENNSGDSSL*
M3P_c10026368	M3P_100263682	F007310	MRAVYWNNTERWFNHHHYELLIEDITGFDLKKSLCEESVKYMAKRLSDTKYQRRFKTLYTIYENEYNALVEKFNNQAENNGKIEVA*
M3P_c10026672	M3P_100266722	F017792	MGTEREFRDKWQSRIDGCGPYCSCLVIIVVLVIAFFGFVIR*
M3P_c10027570	M3P_100275701	F024112	YTILVRELDMTIEQYYEQRATVLNALYCSVKSAIQTEDLHNNHRIEWIENDFEVCRKKLEAIEEEMRVLLGDPFVEEVK*
M3P_c10028529	M3P_100285291	F048265	MAMTFTTVKNTNLETVIHFTSSAAESGTITIANLAAGSQARNSDAPNVTIVKWSIHGELGSKVTINRNSKIVIACAPENAPYMEANSWGIPINLDPTFDIVVTNGAAKDVSGFLVLRKVAGWSTKVETATYGAYDDTSRVGASTTL
M3P_c10028971	M3P_100289711	F014142	MNSLNTLTVTVEPFHSMASSNTKSNELFRLANGNYISRMAYVHMVASEGLISHRYLTPNESKWVFANRVA*
M3P_c10028971	M3P_100289712	F005531	MTITYTLWQGSQLLSVNNKASKPEEILAVIAELNKLGKGFSFIVREVDTK*
M3P_c10028971	M3P_100289713	F063685	MTIELDNYGLMLDTEWCYIALSWQLLITTALVAVGYKVYKKWKTKNDK*
M3P_c10031129	M3P_100311292	F100655	MAKRKSTAQRIVYAGLLMPLKHFSPADKNRVLRTNEGGKKSPKQVIYVGETGLPTEERYLQHLLRYKSQRGWIYKYGIRPIELSKRLADLDGLKPSVKKEIYMLARPLRTDSKEREAAVAAIFRREGFYVVSA*
M3P_c10031747	M3P_100317471	F074873	LSDFNTVIFNFNSPWGCPEQFVTSLSTLYPDAVFEMVTGSIENDNHYEFTCNNGTYKVTCSYETFKEAVMDGKWGGAGEWEILFEDEQV*
M3P_c10031747	M3P_100317473	F002406	MSERLRDELSSEYDDETKDLIIRAFRNGLFQNPGIVEELKSSSLIESDYFEDAE*
M3P_c10032622	M3P_100326221	F102568	MRNIYKIIGLLFLTGVLIGLFFTTKSPPALPDTQPNAAITETRSEPKAEVQTSPTVEDPFKKFLDQKAGSLNTVTKSDNSQALPIQPSNDPFKEFLDKQKQNSKDQVVSPFGKN*
M3P_c10033147	M3P_100331471	F005780	MQGVTDVMLKSGINFTTTLRSQGNQIARQREKIIRYWYENNTSEWLLWVDSDVVISPEKFKLLWDNKDAKERPIVTGVYFTTDTPEEPLMIPMPTIFNFAEAQDGVVGIKRVHPMPENQLIKVEAAGMGFVLMHRDVIDKIIEA
M3P_c10034105	M3P_100341051	F024557	MESKVWIYFSKTGTGYEMSGSDIISGIDAFILTDGTYLIEYSHSELINDMHFFIYQWDNSQKKRRTIFEGYQKEKILMGMVKDIDKLPLNVTSKILTMYYNDNEELELEKNANV*
M3P_c10034520	M3P_100345202	F043361	MEPDLSEELAALVMRLYSTQLKRSADEGGGVELSFISNNRLYHLMVQTEDQPTEFTLSAGSANPFMEAPSGLMQGFVRQMRVRYPSVVFGPGGPHGADFGASTHGQKFPGLPLQAEFLRCKQAIDLCLDGTSVVIRELEGD*
M3P_c10034584	M3P_100345842	F017479	MNELKTAAGSWARAFLVAAISMYAAGVTDPKALIAAGIASIIPPVLRYLSPNDSSLGTKK
M3P_c10034819	M3P_100348191	F041757	MQNPVNFRKSAVHSDGEGGIIIETRQDITDILEQNKKEYNSYDERAKWSDNLFGNKVASI
M3P_c10036178	M3P_100361782	F000311	MYFELTAPDRLSLEMAYWDAQITGLDPEFMPPLTFNVGTGSIEKVSRIRDKYNLSESYWSDREATGYKEK*
M3P_c10037716	M3P_100377161	F007113	EQLKTVEIALNELFNSDGWISGRKEADIDKIADRAQYLLHVIESYNKNNKK*
M3P_c10039336	M3P_100393362	F105050	MFFNGFTLLMMIVGGAIGFGLSRLFIDTQYLVERLSARVGYEYDNEGQIVIYTGLYDDEQEIYAEGY*
M3P_c10041224	M3P_100412242	F040524	MAGLLDIFGTGGVDTMGLLGMSPEDIKRSRDDAQAQALYALAGRLFQGGNTGQSIAEGLQAGQKAYKGGITDVMQGQLQNVQLQDLIRKRQLEQQGLAEQ
M3P_c10043082	M3P_100430822	F030374	MSKRLPGLVIEVESLPEFLAKSDEDILQHVRSVLLHRAYAVQRAQLAKCDGVQFSPNKDSCVFAAKGRALLHVRFAQLKG*
M3P_c10043250	M3P_100432501	F088870	FEVDPHFSGRRWCDILLLPAGEVVYSGKAADKIAQNTLSGKLFRWQIGPGSNNMNVDTGYNSDGSRKSYNIPVKYSGRDHMPWNLPAPYRNVNNLTEYKVGTFKVSSVTETSSEVDIKWTANFNDNGKFPAFTMNTGARPKSGWIRFSDFGGADEYVLTSDTLKVLDNINFDPEYWWISQDSKDKLTKLMDAYCTTRSGAIIYKATKNPSTGLFEGDIFFRPSVERQK
M3P_c10044568	M3P_100445681	F039485	LCKIENNKLWTKLDHGLGFPRPENRLPNKGTLNFKVLFAKSSGSTIANEKSAQDLYKKLQPEVVSSFYNQVSNDSVAKIQFEPHYSWIEFDKLESLQDAAGADISRVESEWRTFVSKTLETADSQIDFTKSDGVIIILDPNSSYLRIAYALADEHIVDGKKISNVVMLGRAFVRVGRPPYLVVHELGHLFGLPDLYSYQDSTDTADYFSVMN
M3P_c10045139	M3P_100451392	F072281	VKLARVTHIFAHRKSGEVQGSDMGFYSLPTDIALVTTTTFIYRNSPDRELTHNELNRGAA
M3P_c10046842	M3P_100468421	F062705	SQDTKRLVQVFLSQPQTPGFGIFEVSADNAGKLYCTCPGYSGRKVCKHTKFVQARIDSNNGNYPLVISDRATSEDALKAKESNEAFRHFVIKFGKIEVH*
M3P_c10047014	M3P_100470142	F001562	MKSQFEKDLEIKESFIDLLNDLYPTVKIGYSTFTPAEILECCDPVAFAIGLVEHEDYLAELEEE*
M3P_c10049282	M3P_100492822	F043399	MLLDDYPIVIWTIVKKNNNYILLDSCGIEVFRRKENRKKEIYQYCENNGIDVQEEFLLVISKVI
M3P_c10049282	M3P_100492823	F018927	MKKHIEITRHLTVDGTSTFYVVEKSKNSSSIIWNGTCKQAAYQVAYRNARKESTPLYDTLYKAEVDRNGVKHIIPIGNE
M3P_c10052057	M3P_100520571	F005909	EEEVMENYEEDITKYPTPDKQYDGAKKYETYESLQTGAMGKSAK*
M3P_c10055484	M3P_100554841	F075744	VYIDQPYDCGLPCRGNPPKPIDPAHTYPGPLDLPTDPRERVYDKYLQCESRQLGQKPAWHGHKDIPTEIKTFMNSPHSAPGLAWESVWAQYWFNQHHHLRPREVLRWHPRTWPSGARPFKKLKIKDCTDRPYFGLHPDIVALILDLTGRVKGLLEHDGLFHPETPFELDQLIRQADTVTGFRP*
M3P_c10055625	M3P_100556252	F039139	GDSMSMFLNAFEFTSEDIVTILRAHDTDITIQQLAEIHEILDHDSIIRSALQYNEPDIQLKSALSKAEDLMLMDGLYITEPKRFHVDD*
M3P_c10056191	M3P_100561911	F102628	SAFLSHRPMNLGLWTPKHTSAVIEGGHMLISGAPGAGKSHLLREAIVPGLVAAGVQVLVIDYADVIGAKIKGLHREVYGEETFGVSSPNAASPAPDLLGSSAIATLACERSGRDAMADLLLRSLFVELVKNPPDREVRRFLVVDISHQSSALSTFGPLLRE
M3P_c10060293	M3P_100602933	F018702	VAKGATESRDKVKTEAKFIRRRIAVGLILLALFAWAMDATTPEMCKVPTEQMNQFCLDLIYP*
M3P_c10060412	M3P_100604122	F037937	APDNIVMLTDEYNDVRAIDMKYESELSSDKIWGQFKLGFSYLIGAEIVYAKNHA*
M3P_c10061664	M3P_100616641	F001754	MYNNFAASKMSNNPKFSVMVEFTDFMGNQHRIVCNNRRKLAEANEFLKMFKTESVAINKILGEYPVVMGKFPKKYHTEIRKELAVAGFGSVSNFLIK*
M3P_c10063518	M3P_100635182	F010161	KMLYDALIDYVSYFYNCSDMPDSAKLNALKIFEALQDEKIDVIDFIPVMRQIQFSLDLLAA*
M3P_c10065016	M3P_100650162	F063208	MDEDAEKEFERMQNLSYDKMVAEGLIIPARNPQRVFAVPKGKIKKGKQLSEILIEDRRSARY*
M3P_c10067086	M3P_100670861	F005000	MNHKQIKRFQVRVEFADDSGIPRLKYQYESMLTHDMRSKGYARVLDIDTSFSVEFDGQTWVFLMTLYGVYVGKKKAWQSEGIIQSKLIPRSMPQRISNPS*
M3P_c10067422	M3P_100674221	F004669	MENTTMQLWEIKNFQSSSVKSLFVGQTANGQDCIACAWNSSELYVFAYEGIVDTFLWALEMFQSVGQAMAYAKLKNGMEDRSYSLPYHVTMEQRTHNQLYRFQLQYLYIFESTLEIHSNLCDDTPENAIKN
M3P_c10073006	M3P_100730062	F009266	MTPKEQKILDKEIQYLCEQQDRVKAIREYTNINPGYTFLKEVQTIESLYKSVLENRKHDKSMYFSCATSGWYVVYLRDKKTYKKGEKFRIKIYHTFVWTDNID*
M3P_c10074071	M3P_100740711	F046239	DIDKNALLYLQLAAQIKELETHQDSLKTSFEGVLGTTNSGIELSWTTVRGRESVDSEQVEKLLGFVPKKVGAESQRLSVKQSGGK*
M3P_c10074071	M3P_100740712	F041728	MATEGTKFQVNYKLADGTLINLYAASATELEAGLADLAMNATNIRMVGTELSGSRYQNVAAPTTEAVAQAFNATPVQTPTPSGSGNTCRHGAM
M3P_c10074526	M3P_100745263	F016124	MADESAKGALIEKLTFAVLPLLFTCVVYLMSALANLSHEVTILNSKISLVVTSDNKQATNTGAELARERLR
M3P_c10074891	M3P_100748911	F064666	MEEKVWIYLSKTGTGFELKGADIISAFDAFINADGSYLIEHSYSDIKGDEHFFIYEWDKSQKKRRTIFEGYQRQ
M3P_c10076050	M3P_100760501	F055495	PTGASCAASGAPLGSALGCSVGAALSEAAGVGVTVVDSEDEFFEITATAKITIPNTTAIMIPFEEPVSLLLAFFEEYEEPDAGFGVVEIVDTEDLDDPLTGTAGIE*
M3P_c10080412	M3P_100804121	F104436	MTHYIGTIYFLGKYRPLSVEGDNLEEVMIELSTRAREAPQEVRERVKDLWLSMDTRYTRQSVEHGSYGACWMEADRPAFQGEPWQ
M3P_c10081814	M3P_100818142	F085149	MQIIYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNIEEFEVNA*
M3P_c10083189	M3P_100831892	F029288	MNKNNEARRKAESQALFELMLKAPHLVATPKKYKGSRQSTKAKAIKESE*
M3P_c10083401	M3P_100834012	F009948	MSIFQLDPNNVAFGVPSLGTSQVASVTNSSVQMTAFGASTTMIRIACSLGHSHYQIGSNPTASITTSAMIPNNSFEIVRVSPGQKIAFIKDATVTASTVSVTELA*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000206: Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences