Sample 3300000209

3300000209: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P20 2000m

Overview

Basic Information
IMG/M Taxon OID	3300000209 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046785 \| Gp0053613 \| Ga0026144
Sample Name	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P20 2000m
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	64433866
Sequencing Scaffolds	51
Novel Protein Genes	54
Associated Families	50

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
Not Available	38
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	3
All Organisms → cellular organisms → Archaea	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine aphotic zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	P20, Pacific Ocean
Coordinates	Lat. (^o)	49.566667	Long. (^o)	-138.666667	Alt. (m)	N/A	Depth (m)	2000
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000567	Metagenome / Metatranscriptome	1020	Y
F001048	Metagenome / Metatranscriptome	793	Y
F001493	Metagenome	683	Y
F001625	Metagenome / Metatranscriptome	661	Y
F002006	Metagenome / Metatranscriptome	605	Y
F002745	Metagenome	533	Y
F003092	Metagenome / Metatranscriptome	508	Y
F003285	Metagenome / Metatranscriptome	496	Y
F006198	Metagenome / Metatranscriptome	379	Y
F006552	Metagenome	370	Y
F008912	Metagenome / Metatranscriptome	326	Y
F009986	Metagenome	310	Y
F011529	Metagenome / Metatranscriptome	290	Y
F012070	Metagenome	284	Y
F012125	Metagenome	283	Y
F014511	Metagenome / Metatranscriptome	262	Y
F015752	Metagenome / Metatranscriptome	252	N
F016412	Metagenome	247	Y
F016731	Metagenome / Metatranscriptome	245	Y
F018382	Metagenome	235	Y
F021319	Metagenome	219	N
F022907	Metagenome / Metatranscriptome	212	Y
F024888	Metagenome	204	Y
F025055	Metagenome	203	Y
F026397	Metagenome	198	N
F027203	Metagenome	195	Y
F027871	Metagenome / Metatranscriptome	193	Y
F029786	Metagenome / Metatranscriptome	187	Y
F031252	Metagenome / Metatranscriptome	183	Y
F031535	Metagenome	182	N
F032813	Metagenome	179	N
F034336	Metagenome / Metatranscriptome	175	N
F035075	Metagenome / Metatranscriptome	173	Y
F040684	Metagenome / Metatranscriptome	161	N
F042009	Metagenome / Metatranscriptome	159	Y
F054935	Metagenome / Metatranscriptome	139	N
F057445	Metagenome / Metatranscriptome	136	N
F063069	Metagenome	130	Y
F064804	Metagenome	128	Y
F066858	Metagenome / Metatranscriptome	126	N
F069480	Metagenome	124	N
F074007	Metagenome	120	N
F078841	Metagenome / Metatranscriptome	116	N
F090504	Metagenome	108	N
F090619	Metagenome / Metatranscriptome	108	Y
F101330	Metagenome / Metatranscriptome	102	N
F101351	Metagenome / Metatranscriptome	102	N
F101846	Metagenome	102	Y
F103429	Metagenome	101	N
F105358	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
LPaug08P202000mDRAFT_c1000698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5022	Open in IMG/M
LPaug08P202000mDRAFT_c1001021	Not Available	4210	Open in IMG/M
LPaug08P202000mDRAFT_c1002625	Not Available	2644	Open in IMG/M
LPaug08P202000mDRAFT_c1002947	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	2466	Open in IMG/M
LPaug08P202000mDRAFT_c1002987	All Organisms → cellular organisms → Archaea	2442	Open in IMG/M
LPaug08P202000mDRAFT_c1003588	Not Available	2174	Open in IMG/M
LPaug08P202000mDRAFT_c1004645	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1872	Open in IMG/M
LPaug08P202000mDRAFT_c1004958	All Organisms → cellular organisms → Archaea	1802	Open in IMG/M
LPaug08P202000mDRAFT_c1005268	Not Available	1726	Open in IMG/M
LPaug08P202000mDRAFT_c1006203	Not Available	1547	Open in IMG/M
LPaug08P202000mDRAFT_c1007721	Not Available	1335	Open in IMG/M
LPaug08P202000mDRAFT_c1008078	Not Available	1298	Open in IMG/M
LPaug08P202000mDRAFT_c1008322	Not Available	1268	Open in IMG/M
LPaug08P202000mDRAFT_c1008744	Not Available	1228	Open in IMG/M
LPaug08P202000mDRAFT_c1009020	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	1204	Open in IMG/M
LPaug08P202000mDRAFT_c1009344	Not Available	1176	Open in IMG/M
LPaug08P202000mDRAFT_c1009429	Not Available	1168	Open in IMG/M
LPaug08P202000mDRAFT_c1010657	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	1074	Open in IMG/M
LPaug08P202000mDRAFT_c1011750	Not Available	1001	Open in IMG/M
LPaug08P202000mDRAFT_c1011922	Not Available	990	Open in IMG/M
LPaug08P202000mDRAFT_c1012980	Not Available	932	Open in IMG/M
LPaug08P202000mDRAFT_c1013126	Not Available	925	Open in IMG/M
LPaug08P202000mDRAFT_c1013252	Not Available	919	Open in IMG/M
LPaug08P202000mDRAFT_c1013276	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus maritimus	918	Open in IMG/M
LPaug08P202000mDRAFT_c1013533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	905	Open in IMG/M
LPaug08P202000mDRAFT_c1014311	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
LPaug08P202000mDRAFT_c1014962	Not Available	842	Open in IMG/M
LPaug08P202000mDRAFT_c1015225	Not Available	830	Open in IMG/M
LPaug08P202000mDRAFT_c1015491	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	821	Open in IMG/M
LPaug08P202000mDRAFT_c1015502	Not Available	820	Open in IMG/M
LPaug08P202000mDRAFT_c1017332	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	758	Open in IMG/M
LPaug08P202000mDRAFT_c1018629	Not Available	721	Open in IMG/M
LPaug08P202000mDRAFT_c1021114	Not Available	660	Open in IMG/M
LPaug08P202000mDRAFT_c1022032	Not Available	641	Open in IMG/M
LPaug08P202000mDRAFT_c1022583	Not Available	631	Open in IMG/M
LPaug08P202000mDRAFT_c1022912	Not Available	625	Open in IMG/M
LPaug08P202000mDRAFT_c1023815	Not Available	608	Open in IMG/M
LPaug08P202000mDRAFT_c1023932	Not Available	606	Open in IMG/M
LPaug08P202000mDRAFT_c1024100	Not Available	603	Open in IMG/M
LPaug08P202000mDRAFT_c1024245	Not Available	601	Open in IMG/M
LPaug08P202000mDRAFT_c1024258	Not Available	600	Open in IMG/M
LPaug08P202000mDRAFT_c1024583	Not Available	595	Open in IMG/M
LPaug08P202000mDRAFT_c1025778	Not Available	576	Open in IMG/M
LPaug08P202000mDRAFT_c1026161	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
LPaug08P202000mDRAFT_c1026674	Not Available	563	Open in IMG/M
LPaug08P202000mDRAFT_c1028607	Not Available	536	Open in IMG/M
LPaug08P202000mDRAFT_c1028610	Not Available	536	Open in IMG/M
LPaug08P202000mDRAFT_c1029167	Not Available	529	Open in IMG/M
LPaug08P202000mDRAFT_c1029317	Not Available	527	Open in IMG/M
LPaug08P202000mDRAFT_c1031455	Not Available	502	Open in IMG/M
LPaug08P202000mDRAFT_c1031603	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
LPaug08P202000mDRAFT_c1000698	LPaug08P202000mDRAFT_10006988	F090504	MVVFLVLTIIIFGLILPYWAGVIAKRKGKSFVLWCILQLLFFFPIVLIAFHAPVEKEK*
LPaug08P202000mDRAFT_c1001021	LPaug08P202000mDRAFT_10010216	F057445	LQKLSKAAVNEILPKAVSLILIKERLENKRKKDFL
LPaug08P202000mDRAFT_c1002413	LPaug08P202000mDRAFT_10024136	F066858	EKTSKRRDTSMGFSSIFLLRNMYDAEEIRISANKILKMSGDISXDTNAPSIVPGTAIKPSFQPSESSIRFCLAYMVVDATELLNTANRLLLTANVGENPANVNTGTIIIPPPRPIIDPNIPAINPSGINQSSSSMLYRY*
LPaug08P202000mDRAFT_c1002625	LPaug08P202000mDRAFT_10026255	F015752	MRNFKNFDNITEARDAYIWDTNPKTLEDAEDPEVMTSGFGRLGFSQIKDKLVYGSKQFVKWAQDGNYESINSYMSSFHNLLETLQVIEKEMKKPAWKKKITMLKRAGK*
LPaug08P202000mDRAFT_c1002625	LPaug08P202000mDRAFT_10026256	F002006	MPEELQSVKLQVGLLQQDVEARGKQIDALLSKLDSTADKIVELTVEIKSLNSRQERHSKVDDEIRSELKLLHSRAGSIHDEIGKSERRVSDSIHKLEERVRAVEQYKSKLMGIAITVSAGVGLGVASIMGLLNIFKD*
LPaug08P202000mDRAFT_c1002947	LPaug08P202000mDRAFT_10029474	F027203	QGSLLNDFVTTAPAPARYNRSKILSDIPKXPEARIVGLSRVNVPIEVERLAVTLNXLIIFSYNS*
LPaug08P202000mDRAFT_c1002987	LPaug08P202000mDRAFT_10029872	F021319	MTRPEKDANIRINCEVGAARFIEIPSATTINGTKISPPPTPKRLDIIPAKKLAPAEKTSKIRDVSKGFRSIFLFRKMYDADAKRTSANKILKISGDRSEDMNAPSTVPGTAINPSFQPRESSMRFCLAYTAVDATELLNTANKLLLTASVGENPTNVNTGTIIIPPPRPIIEPNRPATNPSGMSQILSINVLG*
LPaug08P202000mDRAFT_c1003588	LPaug08P202000mDRAFT_10035887	F069480	LIYIELIDRIYILESRNNIKRVEGNAGQILDEAPKNKPYNTVKTVFFSVFKPVVFL*
LPaug08P202000mDRAFT_c1004645	LPaug08P202000mDRAFT_10046454	F024888	MNLDKIDLKNIHKIVGKIVDGIQKEEMKGKTPDEFAQERGFDNWMEYAAWSRHTGGDYHMMEMMLKSKWKEQDPEEFARQKKIEGDQRTREHSYIGILDEEKIKKKNNGHKYYKPVHKSEFSAEELEVIYDERGVGGEPVEYRW*
LPaug08P202000mDRAFT_c1004958	LPaug08P202000mDRAFT_10049582	F078841	MFDDSDVVHSESRSDKAKRAISEYLDEYGQVRATELKKEVCDERGICSEKIFYRCLFELVKSKRIIKNEQNRGNVSYYKPDWGVYENMINTDVIKQGTSTVRILAEVGRHENEVMQLTLLKMAFGNIMSMYASMTLITQQPSKAKTSAVITNTLKNTIPELLEMFSIALEKCGKNRSRILSSLMDYRDGNMDGGWVLENHPDFKK*
LPaug08P202000mDRAFT_c1005268	LPaug08P202000mDRAFT_10052682	F057445	LQKLGKAAVNEILPKAVSLILIKERLENKRKKDFLDLCDLFSVAPDVIKIM*
LPaug08P202000mDRAFT_c1006203	LPaug08P202000mDRAFT_10062032	F040684	MKRVIYLIILAMSLTLVFSQGKPCCKNKNGKGKVACKFNRANIDVNKDGTVIEDGTQIAAAGVQCPLSAQNTSINKKNCTNCAKSPWWKFWGKKKGCCNTNS*
LPaug08P202000mDRAFT_c1007721	LPaug08P202000mDRAFT_10077214	F016731	MGMAISLILTSCAKNIADKNNDLGSGDKSNLPISLTSLIEHAEYCKAIYDSGGDQKDEVAFDVKQVNGISIIIIRGT
LPaug08P202000mDRAFT_c1008078	LPaug08P202000mDRAFT_10080782	F001493	CRQRISMKRFKEFIKEGPPAWTESLSTMLFDLPREGLKDLKIPLSPAIFKRIWPESVRSRVFHLTDLDGVGKLKKMQGKKKSISAFYNIEDYILAGGIKTDGGYVVELEGDVLAAAPDDVSSQPDKTGRRWITFSSLMNPSTASDPGLGGGSKLKRIEKDLEKLLVEILVKNGMGPYKKGLTTRELNRGWSYLGKSTGGKEKSIIIKDYIDGMEKIMXKYSKPLKSVFTDYAFDKELVPDPDSGXKAMWDEIVVNNFKIKKIHVTEEFGEDWQEDDDIEGFPFELYPNGNGDLIDYIARTRN*
LPaug08P202000mDRAFT_c1008322	LPaug08P202000mDRAFT_10083222	F026397	MKKTYKILLLSSLFFIIGCGDIMMHRKPIISVTVSSNCHDLYRDDNVYINISRVGTDWNSDMYVDVGSTGALAVFVEGKYNITATAARKNLTGSNYESIKSIFVYHGEERNVEFYCN*
LPaug08P202000mDRAFT_c1008744	LPaug08P202000mDRAFT_10087442	F012070	MPIEIKMIEAANESYDDYILYEILCDYCDEEYTIKYIMDKRPKQSIECCPFCSNLIEEPAEIIDDEEIGWD*
LPaug08P202000mDRAFT_c1009020	LPaug08P202000mDRAFT_10090201	F031535	TRAYVAIASANQLRGLTNEVNHFQVPFKTFEFYTVNIE*
LPaug08P202000mDRAFT_c1009344	LPaug08P202000mDRAFT_10093442	F105358	MDVPSKNKIIIETSNTHSFADVDFIVYCQKALYSKTPYRVRIVDWEPEYCIAYIKTLRQHHRWKPLTFKYQRRGHYIFIFKT*
LPaug08P202000mDRAFT_c1009429	LPaug08P202000mDRAFT_10094292	F009986	MPSYTFINKLTNKKYDKIMSYKELLKYIKDPDIEQEYKVNTLKCSDNNGEKDQIIDWCRDKTIRGNGKFETYGKVKTAQHNHNFKVLKDRKHFSEPQED*
LPaug08P202000mDRAFT_c1010657	LPaug08P202000mDRAFT_10106572	F025055	MSYFRNSVGDKKIIKATYSDSQMIEVLGGTVKKIFNYEEEDNVTFLKNEVFWLNYLKSKWVPELLEVGKNYVITSYYGPDLTKVHHLSRPKDLASQTLEMYRFFKDKNVFKLNGALRNMTLNKGQLVAFDFKHARFRTNKYIDYEIVSYEKWLSKIDNELVEKLKLLI*
LPaug08P202000mDRAFT_c1011750	LPaug08P202000mDRAFT_10117503	F027871	MKSFLHKIQGIGIKCYLQVLFTVGAFMSTRSWVDKHIKVCYNRLDEINSDYDKQTRTNWYPKK*
LPaug08P202000mDRAFT_c1011922	LPaug08P202000mDRAFT_10119221	F034336	MKINVKVLSAFLLIVNLYAVENPEDVKPTIQNGKGLFVLLDDTSWISQIVAEAYILGTIDGIITRKRPLRALCGNKVDKALLTIPNGIEIERIISIVHQFIKDNPENLYKPSIALIRQSLLRAFDQYDIAGY*
LPaug08P202000mDRAFT_c1012980	LPaug08P202000mDRAFT_10129802	F054935	MKRRTFIKFTSLISSAIFLPLAQLFGAKPKPKKSLTTFVSDLPLQGSPFRKNCDSLDNYNDISFETMINDIVHYRTPTKLRDKLILGIKTKDD*
LPaug08P202000mDRAFT_c1013126	LPaug08P202000mDRAFT_10131263	F022907	MDEDNTLDIRQSVGDVGGDFTKSITIESGGDERVGDIEAVIDLTYNIFQYIPELLFVSVYGLAMYAGVLLLHKHIKGND*
LPaug08P202000mDRAFT_c1013252	LPaug08P202000mDRAFT_10132521	F012125	GRKSFFSAGKPKNLPAFYFLVVAGIILMVLLFKWFD*
LPaug08P202000mDRAFT_c1013276	LPaug08P202000mDRAFT_10132761	F006552	MLKFPLLISPVLKIKSSRINPVANIPKPIPIAKKAIDNLNNVGLAVFLNPIYEIVPITRPTKSPTRLRIISKKNSNYADSVTVLNKV*
LPaug08P202000mDRAFT_c1013533	LPaug08P202000mDRAFT_10135332	F035075	LRKVLNDLDIIKLICIYDNAISVKYVNKKNQRRLWGTPKNIEAVEKWVLKKEELEKKIRKNKNQ*
LPaug08P202000mDRAFT_c1014311	LPaug08P202000mDRAFT_10143112	F008912	VKNLVVTLGITGCGKSTWLKDKSPVIETDDLRVELLDDISNVTQEGFIFGTAAKRISKLFDTHDTVYFGATLVDSKHRIPFLQSIKDMCKHKFVIEMIIFPGIPELSKERIAKALKDGIQRADSIQFVDEQYEQYLHTISILDDEKDFYRMIKRVDNPNDEARKINNRVEDISEKLDMIIEQNDQD*
LPaug08P202000mDRAFT_c1014962	LPaug08P202000mDRAFT_10149621	F002745	KMKTFKSYLTEFAQQSTSDYVFDTHTDNSSSLKIPISGPMFKRIWPDTIRATVFHTTDLAGLENLKKLEGGKKSISAFFSMMSRYMETGVATSGDVHVVVEMDADVLVSAKDDIWSQVDKTGRRWVELSWFASATRTGPKFDKVEKDLNTLITNLVKKHLTKILGKNTVISTHEYELWGAMKRHLHGDGQKLRLVIKDYFDGVEKVLKKNSEVMSNILHGYAKGKRMTDNAWDEQIVNNIKIKKVHVWKTNRDDVWGEDEIKQHITDVHKWPIKVWDASI
LPaug08P202000mDRAFT_c1015225	LPaug08P202000mDRAFT_10152251	F008912	MKNIVATLGITGCGKSFWLKDKNPVVETDDLRVELLDDIDDLTQEGLIFSTAAKRMVKLFDTHDIVYFGGTLVDSKYRLXFLQSIQDMCXYPIVIDLMIFRSDPEESKERIEKALKAGVQRANSIYLIDKQYSQYLHTIKLLESEVQRANSIYLIDKQYSQYLHTIKLLESE
LPaug08P202000mDRAFT_c1015491	LPaug08P202000mDRAFT_10154912	F101846	MKLDENWYVHAPWAQLVCCTEIPEDKLVKFYAISNEVLDESGVTKPSKDNYGNGVIPLSW
LPaug08P202000mDRAFT_c1015502	LPaug08P202000mDRAFT_10155022	F029786	YDLDEIERQRERERMSRGIRPVELGKDEKPWTAVDIELRDEDFTMIALEAHERDITFNKMINIILKDGIKQAQYRFEHQSKPQLLNEDK*
LPaug08P202000mDRAFT_c1017332	LPaug08P202000mDRAFT_10173321	F032813	MKTNEEGHVWLEKSQAYICPSYLNKTCTDFSDTDSESLYNLYQKHFPNAESNAIKSQIKDEVFNLIGKDNYKKKNLIKALRNKFPEIKSGVICRILKKYLSLRVLE
LPaug08P202000mDRAFT_c1018629	LPaug08P202000mDRAFT_10186291	F090619	MSSEKYIQIRAKVPIDSDGTVFKEFNANEKFRRQDISIMLKLLPLIQKYELDFLPKIIDYNENGYRYKYVDGKTLKEEIDNGILKLTQKMIYEMKIAMDDIWKRFYQISIENKDDELFGGNGFLYHGDPWLGNAIWNDDSKELKFIDIDSLSIADFVPMTQ
LPaug08P202000mDRAFT_c1021114	LPaug08P202000mDRAFT_10211141	F016412	MKIENILEVIVGTLLVIIIAILLMPKEEVSNEPIIIEETFNEYPLTAWHDTDKKGDVVKIKYRVSNRDTFIEVLDDNGKIVHKQPFQRSPWDDGRSRDFTYSWVLYDTQDYGDEIPPGEYEIRVCHKYSRNIDLRTWITI*
LPaug08P202000mDRAFT_c1022032	LPaug08P202000mDRAFT_10220321	F064804	MDERKHHDMVMIHHADKLAKARDLIIIFLFGSILIESLTGVHLLGSWWQ*
LPaug08P202000mDRAFT_c1022032	LPaug08P202000mDRAFT_10220322	F001625	MALTISSSDWTNANVRKTLSWQAALVSKLRVFAVKVTFGASDAYATGGVSADLKEGRISTLVAVIPTYSNIDRIVKYDKANEKITIWDVGGSAGSGLVQHANASSSTNSKIFEFLVIGY*
LPaug08P202000mDRAFT_c1022583	LPaug08P202000mDRAFT_10225832	F103429	MKGNMKKAVIEILYEGEPVLGSRTNGQYLVREYEDEEELGGSFYKTIEEAEARVLEYQNME*
LPaug08P202000mDRAFT_c1022912	LPaug08P202000mDRAFT_10229122	F001625	MALTISTTDWTSANVRKTLSWQAALVSKLRVYAIKVTFGASDAYATNGVSADLKEGRISTLVAVIPTYTDALHHVVYDKANEKIKLYGSGSGSSLVEVANTSSTTNSKIYEFLVIGY*
LPaug08P202000mDRAFT_c1023815	LPaug08P202000mDRAFT_10238152	F031252	MKSFKGYLTEFAMQSTSDYVFNAGSSSSGLMIPISGPMFKRIWPDTIRTTVFHTTDPWGF
LPaug08P202000mDRAFT_c1023932	LPaug08P202000mDRAFT_10239321	F101330	SNQSSLMWLQNNYTVSLCGFIGVCIGYFTGHQEICIMIGVGIGIIIRIVQSKSK*
LPaug08P202000mDRAFT_c1024100	LPaug08P202000mDRAFT_10241001	F074007	MDVKERTYGKYGNNLIFKKELLDIVEELEGQLLFFMHISRWGLPLENRWLDYFEYEFKPDKKFYIIFEEEEFSTHTVLDLDKVVDFFKEKGVDKDKLIWVTASHNFNDLLKRFNKYIEIKSIPLHWGDSRFMKQGNIIKSIVKDKVINYDVKSFGFNSSFYQLTNTKILSEIETKKTPSKLFCCP
LPaug08P202000mDRAFT_c1024245	LPaug08P202000mDRAFT_10242454	F000567	LLKLTQKITTWHEGMFKYITLKSKTSVFFTWLLVFICLYEIFEHIIIPIFLIWWGFFK*
LPaug08P202000mDRAFT_c1024258	LPaug08P202000mDRAFT_10242583	F001048	MKIKSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRWELGSEGYSIWSECGYKDIPTLAKAYRIS*
LPaug08P202000mDRAFT_c1024583	LPaug08P202000mDRAFT_10245832	F018382	IKIDAAKVNLKPIKRKGGKCSIAGLAITKPKPKKIGTSVAKNVSLRLNIYSH*
LPaug08P202000mDRAFT_c1025778	LPaug08P202000mDRAFT_10257781	F031535	DKPSPKTTTDNIIARGPKNTRAYVAIASANQLRGLTNEVNHFQVPFKTFEFSTVNIK*
LPaug08P202000mDRAFT_c1026161	LPaug08P202000mDRAFT_10261611	F003285	MPDQESIHNLQTEIQTLKIKDEFRTKELDALMNKLSDTSSKLNALSENIGRLLAGQELHKTSDNEVRDELKILHTRIGDLHDKCTEMIDKTETRVSSDISLLYKKVDSLE
LPaug08P202000mDRAFT_c1026674	LPaug08P202000mDRAFT_10266741	F042009	MICSNCGEKISKVIDIGHHWNLSEDLAFACSEKCAEEAPKNWLSENPTTLYKNKFKKT*
LPaug08P202000mDRAFT_c1028607	LPaug08P202000mDRAFT_10286072	F011529	MRWDEMTIKKRKLEGVRLRSVRLWLDDKGFHPFLDQDELLRPDMQKSMSCKYADLPKGAWDLMDIHDLNLAKTSKYTKFLEK*
LPaug08P202000mDRAFT_c1028610	LPaug08P202000mDRAFT_10286101	F101351	IKSYDNNGINVWLDKRGKIYDVPFWQFTMDGIQWMVLDERHGSASQFYSHYKLAKGHVICTGLGFGTREQWLASKPEVTKITVLEKFKEVIDYHKDIGTKWHDKIEIINCDANDYKGSCDFLSIDHYEYDDVLRILDSIKTVCNNITCESAWFWMLEPWIRLG
LPaug08P202000mDRAFT_c1029167	LPaug08P202000mDRAFT_10291671	F006198	NWRDMEVELDVDCNNCNATYTMIYDSDDIQTRQEEHAFHCSFCGILMEPYYDEFFEED*
LPaug08P202000mDRAFT_c1029317	LPaug08P202000mDRAFT_10293171	F003092	EDNVVVEDEETSMKLWLDGVEVDVEANYEKITTYGEEVEYIADDGQTYTKKILVIHFQKEGGRVELTKEHYAVVFTDWEGSTSNSKPIDEGSYQWPAQCPICVRLCICDHGAESKWVRMEIVGDSDVAIMGSARIKKVDEKDGGWIISGNGEGTFYNPYIEANMEGKIEFTNLEI
LPaug08P202000mDRAFT_c1031455	LPaug08P202000mDRAFT_10314551	F014511	MGMKNVTIKTVVNEKFRFKAMDLNGSVFVFEDKPSIPIDIACDTWDVKTGEVLQISPPTPMSTSSLDLGDWRESLVELDDEVI
LPaug08P202000mDRAFT_c1031603	LPaug08P202000mDRAFT_10316032	F063069	NRPIKKLCPMEEKKVKTKPKIIILKLDLTISIIIL*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000209: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P20 2000m

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences