Sample 3300000489

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300000489

3300000489: ZC3D64

Overview

Basic Information
IMG/M Taxon OID	3300000489 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0073241 \| Gp0054316 \| Ga0011586
Sample Name	ZC3D64
Sequencing Status	Permanent Draft
Sequencing Center	University of Sao Paulo
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	20493222
Sequencing Scaffolds	2
Novel Protein Genes	2
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Compost Microbial Communities From Sao Paulo Zoo, Brazil
Type	Engineered
Taxonomy	Engineered → Solid Waste → Zoo Waste → Composting → Unclassified → Compost → Compost Microbial Communities From Sao Paulo Zoo, Brazil

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Sao Paulo Zoo Park
Coordinates	Lat. (^o)	-23.651079	Long. (^o)	-46.620668	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F088555	Metagenome	109	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
ZC3D64_110661	Not Available	674	Open in IMG/M
ZC3D64_111485	Not Available	592	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
ZC3D64_110661	ZC3D64_1106612	F088555	MALRMYFDETVSSLVRDDISPTLGSPDTYEGPAEGGSVERKLYLYSDNFQRTYSNVQISALNADADVQIHYALDQGGQPGTYQTNLQLPDGDYQTPVPVWVKVTFAPTTEPTLRTDLRHHLQWLEAIAG*
ZC3D64_111485	ZC3D64_1114852	F088555	MAIRMYFDETVSSLVRDDISPTLGSPDTYEGPAEGGSVERKLYLYSDNFQRTYSNVQISALNADADVQIHYALDQGGQPGTYQTNLQLPDGDYQTPVPVWVKVTF

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