Sample 3300002491

3300002491: Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant BLVA 2012

Overview

Basic Information
IMG/M Taxon OID	3300002491 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046783 \| Gp0057796 \| Ga0004917
Sample Name	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant BLVA 2012
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	193210698
Sequencing Scaffolds	38
Novel Protein Genes	54
Associated Families	39

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
Not Available	24
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Candidatus Thermofonsia → Candidatus Thermofonsia Clade 3 → Candidatus Thermofonsia Clade 3 bacterium	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX253	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Anoxygenic And Chlorotrophic Microbial Mat Microbial Communities From Yellowstone National Park, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat → Anoxygenic And Chlorotrophic Microbial Mat Microbial Communities From Yellowstone National Park, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → microbial mat material
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Yellowstone National Park, Wyoming, USA
Coordinates	Lat. (^o)	44.534	Long. (^o)	-110.7978	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000642	Metagenome / Metatranscriptome	965	Y
F000855	Metagenome / Metatranscriptome	859	Y
F001381	Metagenome / Metatranscriptome	709	Y
F001564	Metagenome / Metatranscriptome	670	Y
F002229	Metagenome / Metatranscriptome	580	Y
F002372	Metagenome / Metatranscriptome	566	Y
F002795	Metagenome / Metatranscriptome	529	Y
F002978	Metagenome / Metatranscriptome	516	Y
F004024	Metagenome / Metatranscriptome	456	N
F004307	Metagenome / Metatranscriptome	444	Y
F004367	Metagenome / Metatranscriptome	441	Y
F004791	Metagenome / Metatranscriptome	423	Y
F005028	Metagenome / Metatranscriptome	414	Y
F005302	Metagenome / Metatranscriptome	405	Y
F006418	Metagenome / Metatranscriptome	373	Y
F007404	Metagenome / Metatranscriptome	351	Y
F008499	Metagenome / Metatranscriptome	332	Y
F010840	Metagenome / Metatranscriptome	298	Y
F014738	Metagenome / Metatranscriptome	260	Y
F016404	Metagenome / Metatranscriptome	247	N
F018530	Metagenome / Metatranscriptome	234	Y
F025895	Metagenome / Metatranscriptome	199	Y
F030445	Metagenome / Metatranscriptome	185	N
F032180	Metagenome / Metatranscriptome	180	Y
F032293	Metagenome / Metatranscriptome	180	Y
F044842	Metagenome / Metatranscriptome	153	Y
F052337	Metagenome	142	Y
F055751	Metagenome / Metatranscriptome	138	Y
F064295	Metagenome / Metatranscriptome	128	N
F064893	Metagenome / Metatranscriptome	128	Y
F065815	Metagenome / Metatranscriptome	127	N
F069792	Metagenome / Metatranscriptome	123	N
F073593	Metagenome / Metatranscriptome	120	N
F081941	Metagenome / Metatranscriptome	114	N
F084273	Metagenome / Metatranscriptome	112	N
F085751	Metagenome / Metatranscriptome	111	N
F091441	Metagenome / Metatranscriptome	107	Y
F093914	Metagenome / Metatranscriptome	106	Y
F104560	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI24187J35170_1001524	All Organisms → cellular organisms → Bacteria	10267	Open in IMG/M
JGI24187J35170_1001611	All Organisms → cellular organisms → Bacteria	9984	Open in IMG/M
JGI24187J35170_1001615	All Organisms → cellular organisms → Bacteria	9961	Open in IMG/M
JGI24187J35170_1003718	All Organisms → cellular organisms → Bacteria	5924	Open in IMG/M
JGI24187J35170_1003922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5733	Open in IMG/M
JGI24187J35170_1004734	Not Available	5038	Open in IMG/M
JGI24187J35170_1011594	Not Available	2558	Open in IMG/M
JGI24187J35170_1013690	Not Available	2224	Open in IMG/M
JGI24187J35170_1016395	Not Available	1907	Open in IMG/M
JGI24187J35170_1017238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Candidatus Thermofonsia → Candidatus Thermofonsia Clade 3 → Candidatus Thermofonsia Clade 3 bacterium	1824	Open in IMG/M
JGI24187J35170_1018397	Not Available	1724	Open in IMG/M
JGI24187J35170_1018681	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX253	1700	Open in IMG/M
JGI24187J35170_1023192	Not Available	1390	Open in IMG/M
JGI24187J35170_1026517	Not Available	1226	Open in IMG/M
JGI24187J35170_1027572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
JGI24187J35170_1027678	Not Available	1178	Open in IMG/M
JGI24187J35170_1028120	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
JGI24187J35170_1028707	Not Available	1140	Open in IMG/M
JGI24187J35170_1032981	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
JGI24187J35170_1035669	Not Available	931	Open in IMG/M
JGI24187J35170_1038358	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
JGI24187J35170_1039583	Not Available	848	Open in IMG/M
JGI24187J35170_1042520	Not Available	797	Open in IMG/M
JGI24187J35170_1044881	Not Available	762	Open in IMG/M
JGI24187J35170_1046127	Not Available	745	Open in IMG/M
JGI24187J35170_1046499	Not Available	740	Open in IMG/M
JGI24187J35170_1048784	Not Available	710	Open in IMG/M
JGI24187J35170_1049477	Not Available	702	Open in IMG/M
JGI24187J35170_1052188	Not Available	672	Open in IMG/M
JGI24187J35170_1052220	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
JGI24187J35170_1052811	Not Available	666	Open in IMG/M
JGI24187J35170_1055857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	636	Open in IMG/M
JGI24187J35170_1060194	Not Available	599	Open in IMG/M
JGI24187J35170_1061321	Not Available	591	Open in IMG/M
JGI24187J35170_1066239	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
JGI24187J35170_1067259	Not Available	550	Open in IMG/M
JGI24187J35170_1069103	Not Available	539	Open in IMG/M
JGI24187J35170_1074584	Not Available	509	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI24187J35170_1001524	JGI24187J35170_10015244	F001564	LCDPGLCPDAPEGSRCEHCPLDRLDAAQASEPGQLLRRALDLRAALKLGVKLSLDEIAADEFRAMLIIEEEQAGFDEERLNRHG*
JGI24187J35170_1001611	JGI24187J35170_10016115	F001564	LCDPGLCPDAPEGGRCDHCPLDRLDAAQSSAPGQLLRRALDLRTALRLGVSLSLDEIAADEFQALLIIEREQARFEEEHTEHHG*
JGI24187J35170_1001615	JGI24187J35170_10016152	F084273	MRSVILSVTLAAVLLLAAGVADAAAVDKNIPACGRIVGRLILSNPAVYDDGTLGGVTVQGSFSGNYPPLRNGIEIRWVQLISTTHPLNTNAGANTPYFDPGELDMTGDYDPFYWNTTLQGKDNNNYPQFWYKTYQFNGGQGITFYDQPKRLKSSAPVSWLAELNLVCWETGTKNFSVLWTGTYGFNIAQNGNVTVNGWNELANPAWLTQARLNQYFQNWTMSDACRNCLVPEPVFLQMGALLGMSGLGVVASRRRAGRRSS*
JGI24187J35170_1003718	JGI24187J35170_10037184	F064893	VPKIIRYEFMGSWFRFWVLCLTVVGIPFAILYLINGTLRIEHELEDPESFVEQYRSGKLRRK*
JGI24187J35170_1003922	JGI24187J35170_10039223	F018530	MSLEGIPQMTEDFKDFVYAVRGYMRDFPELNRLLRGEESTDRQIAWSVLDALADFNGTPPLTAYTLSYLLQRQQHALLLRMTVCALLESVGLLQTRNHLNYSDGGINVGINDKTPLIMQWLNYFKSTTEQMKQRVKVAFNIESILGPGNAGVHSELWALNATYIGF*
JGI24187J35170_1004734	JGI24187J35170_100473410	F002978	MGSSLRDWRVILRPWADRRLWFVQARRNGRVVWGVVYDAADPESVVLVRRAVATLRAAGADCSALPSVLPGAPGSPSGA*
JGI24187J35170_1004734	JGI24187J35170_10047347	F000855	MDWLEDFWSKIVSWSDELSASLYNAVVEWVNAVVEIWNGWMDALLHPADALPSVPQLRWVVDWLSDIVDYTALMYMLVDYVAYAQVVQQALVAQLTIVSIGLGFRAWLVIRRIVLVS*
JGI24187J35170_1004734	JGI24187J35170_10047348	F001381	MHYVIAFAYVLFWLSLAALAARWLPLWALPVALVQLAAAYVMLRAWLLTVAGRGDGDGA*
JGI24187J35170_1004734	JGI24187J35170_10047349	F000642	MQVVSIALAVCAVIAALWYMRRREAGAGRVRGWLLIWDELAGWRALQASYADAGIVADGVTYPASLPVVRVGRDLVWIARCDSAALVEHQALERARESAALASLWRGGGQWLDFLRVAGVVLPAVFSYFTWSQVAALQALVAQILSLVGEGK*
JGI24187J35170_1011594	JGI24187J35170_10115942	F002372	MPTRREDRLWATVHQRSMHLRALLDGLDMVDVDVTYELDYYPYAIVDLLLLRVDAPPLVLRSAYVHANRQWEYHSEWALRIIDAALLLVEEYRADPSAAGAVGV*
JGI24187J35170_1011594	JGI24187J35170_10115943	F002795	MMATSGLTLCGMVASYREFASRRDGRTYRVITVFGDLVLDGVILCQVDGYDVFVDSPGYTRGEMVELPARLQFVRDSSGRPAVRLYVDEGVR*
JGI24187J35170_1011594	JGI24187J35170_10115944	F002229	MVTLLTVDGVEEIDYLPSDAEIRTSLDDCALYGILLHGVTWIRLSSGAGWWTIIGGRRVVATLGWCWFTDDGRGYWSPTLASVSSEACAMLGVEVEVDDGD*
JGI24187J35170_1011594	JGI24187J35170_10115946	F004024	VQSERDYVRQSPSLGDDDMMFLDARATLAAALARAVVGYSDNRVRALAWLAVATPRLYDRIAPIVESSAIRQSPGASRTLRDALRALSLEEYMRRRDERRSER*
JGI24187J35170_1013690	JGI24187J35170_10136905	F014738	MKLDITLLTGAFFLAFVHPDAAQVAATAVLLLLVTRIERERKAGKRKRAPATR*
JGI24187J35170_1013690	JGI24187J35170_10136906	F007404	KRRSNVDITEIFRLLAAGHTGLSALDYVWNALFGAIGAATAYLADTEGEVLLPRYDAQSNSVELGALGRVLVGAGAGVLVGYSGYIPFIAGVVAPTLLPVLVDKIAGFVGRGSNET*
JGI24187J35170_1016395	JGI24187J35170_10163951	F085751	MSDLIAWIIAAGIIFALVNSNAADGILSALDLSDNLKRAVDWARGVRGVPAGVSAACFFILAYVFGALAYRYDLVPTWRFIQPVANDVLETGAEWLTLFALFLTLLPTLIELASVG
JGI24187J35170_1016395	JGI24187J35170_10163953	F032180	MWWKIEDVPERELEQWATDVTRVERAAKRDVAVRAAGAFVIYSLDDALHYAAGREAPAGAYVVERWVRGKRGWTLVG*
JGI24187J35170_1016395	JGI24187J35170_10163954	F005028	MRDDDLRVAMQFFAGRLRGAQLDQARLLRWTRHKLRNDAQSVAELMLTVGYRATYIRYFLRYHIRNVDPETDSEDVVLVVADLQSAAKKLRQPYRDLAAVCLRWGYVHETVVQMLEKALERKR*
JGI24187J35170_1017238	JGI24187J35170_10172383	F004791	AMSEPAKIYDVEAIRVDRTALTIREAATLLNRELTPEVIARLVRKAIGNQADQFPIRALKAVYERALPKIFEPDEAIRSKVAGLTPNVTTITLGEYHQFLEASERKIAFPDVAATLLVKAYGDDILNEPYAAAALLLKRIFDAVGDEGKE*
JGI24187J35170_1018397	JGI24187J35170_10183971	F005302	MAHSGVISGLYAGNFAVEISTDGATWTAVSDATVKIDDVEMTRPSGEAYVGGSSDYATITIGKREPVEITLTFLYSEATNAAATTIYDQFESATPTLGVRWSPRGLVANARAYATSNDGSATGLGVITNVTLSALDPGEAEPYVAMVTVRTPTLRQYTLGANPTDLS*
JGI24187J35170_1018397	JGI24187J35170_10183972	F004791	MSEPAKIYDVDAIRVDRTALTIRDAATLLNRELTPEIIARLVRKAIGSQADQFPIRALKAVYERALPKIFEPDEAIRSKVAGLTPNVATITLGEYHQFLEASERKIAFPDVAATLLVKAYGDDILNEPYAAAAPLLKRIFDTVGDEGKE*
JGI24187J35170_1018681	JGI24187J35170_10186812	F004367	MDNGTARNERDRSEAWVESLLTNAGASVGRLLDDRQVNAVSLALEVFAYLLAALPADRVEVRDVIKLLKYFSRGVNNAKGEQG*
JGI24187J35170_1023192	JGI24187J35170_10231921	F010840	MNLPFDKPLDKVTNGALAAALVVVVAWALREFVGVDLPAEVQSALALIVGFGISYLVPLSAAEAEAIAQAYYRNR*
JGI24187J35170_1023192	JGI24187J35170_10231922	F006418	MRKRRSAPAPAPEREVVVVEGDDYRILFDRETRDYAVEYRGQPVGWRATEAEARRLVEEMRYEDAKRSA*
JGI24187J35170_1026517	JGI24187J35170_10265172	F073593	MFLKGLNKIHTHLGKMWFFLLIFVFVYFFSLSLLVHAQTTTSSNPTQNNPILSQLSGLNILQNVCIYPGFPDPSCNRDNSILLTVWEYLIRFVAFIGGFTFIYAGYLTMMDKYEQAKKIMSSIVQGVFVTLLINAAINLIVESAFPKIGTSQCPPEQVVRSNIFGDYCINLNINPVIDFAIVVINSLLLPASAIIAVLFFLAGLYNLLISGGNATRVETGWKYMKNSILGLVAGLLSYTVINLVYSILLIFFK*
JGI24187J35170_1027572	JGI24187J35170_10275722	F091441	MTLAELQERREEIVRSLGVTRVQFGERSVEYGRQREALELIDREIAKLTQAGEQRVFTIKTSRGLD*
JGI24187J35170_1027678	JGI24187J35170_10276782	F044842	VEEIEIWRGVRGEGFEDVGRIGFIGEFLGVVDVTRGDDWVERCVLYLADDGSIVTHRMRLSTIADGEDIADVHIIPALDKRAADNV*
JGI24187J35170_1028120	JGI24187J35170_10281201	F032180	PQKELEQWVKDVERFERDAKRDVEARAAGAFVIYYLNDALHYAAGREAPAGAYIVERWVRGKRGWTLYE*
JGI24187J35170_1028120	JGI24187J35170_10281202	F025895	MSDAIAWIIAAGIIFALVNSNAADGILSALDLSDNLKRAVDWARGVRGVPAGVSSVCFFILAYVFGALAYRYDLVPTWRFIQPVANDVLATGAEWLTLFTLFLTLLPTLIELASVGLVQRDIRALQYMTYFFIFFDLVTDHAEAVALVNVWRNGGLFTPLPDALENAAAVLAQIGWTFAASFAFEFLAILFAVTGLLLAANVRAAGGGAR*
JGI24187J35170_1028707	JGI24187J35170_10287071	F081941	MLRNYLRRLNLTTKIALSSLFSLLVIFVLYIIFNIVLFGILKIEPTNYAANQFFSTLEVLIAIVLSLFIISGFHFILIQLSNLPYSDYKLEITTAIFFVLDFLLVIPTTFTTTQFELSPSLKLILDTIYMMTGSIYLVLAAGVFYMDLEDNKILAKRYTRWSVLVFLFFFFIIAMETVRRSMELNILLTFTGINSLLILVIMFADLKSLLNPYPNYQGKTNSIEIISFLLLSATILIGKTLHLVFVSSIFG*
JGI24187J35170_1032981	JGI24187J35170_10329811	F010840	MTPRLEREQEVNRMNLPFDKPLDKVTNGALAAALVVVVAWALREFAGIDLPAEVQSALALIVGFGISYLVPLSETEAEAIAQAYYRNR*
JGI24187J35170_1032981	JGI24187J35170_10329812	F016404	VETDALTEENRNAVLWALLHLALDPDAPAGARVAAARLFLSQFGETNAERDVLVVVDEAAFVETV*
JGI24187J35170_1035669	JGI24187J35170_10356691	F055751	ALNLSGRGGCCDIYLPAGTNANITKPDANLREIVEQSTDEYAQVRYHRKRFLRDRAMPAIDFRADSPLVWRFPETTRAVDISKAPNRVYGQYRGYWTNHLTAPTTIWSLEARRQSLAWRVASVGEYGSKAIAEVRRDEAAVAFDRQIAPITVELDNTRYELMTRDGITVPNWSADVSDYAIVPGYYRNAKITSRTISRERTTYTVSFNPDDFVNVLR*
JGI24187J35170_1038358	JGI24187J35170_10383581	F001564	RRARQRLRGIVGPKLSAGEWPEKPSLRFLIHWALRREELCDPGLCPDAPDDGSRCDHCPLDRLDASQSSEAGLLLRRALDLRAALKLGVRIGLDEIRTDEFRAMLTVEEERERLDRERFEDRRP*
JGI24187J35170_1039583	JGI24187J35170_10395831	F006418	MSKRRPTPKPTQPREIVIASGDDFRILFDREARDYAVEFKGQPVGWRATESEARRLVDELRYEEAKRSA*
JGI24187J35170_1040246	JGI24187J35170_10402461	F104560	EYNQTAPDPLPLLVVLATDIIDVVDETERLLIALVSKARALGIRVIVSMQTPTGKRLEWRMNLSTLISGALVDGSQDAPALGVRDPKALRFRPSQLPPPPGERGLFVVRHNNEQFLVRTPALTADFDALVDARVNDALLETLLVSDVTTPRINKRDASAVTAKPVPQRSDAPGRNEARDSASESAGTGVAPSTSPTVPVPDRPETGESARFGGFSEDGNGDGDEITPSQGVLMPQSASIPVPALADALGRNDEGVSESEYDALLSALAAMQRAGLSRD
JGI24187J35170_1042520	JGI24187J35170_10425201	F055751	MPAIDFRADSPLVWRFPETTRAVDISKAPNRVYGQYRGYWTNHLTATTTILPLESRRQSLAWRVASVGEYGSKAIAEARRDEAAVALDRQIAPITVELDNTRYELMTRDGITVPNWTADVSDYAIVPGYFRNAKITSRTISRERTTYTVSFNPDDFVNALQ*
JGI24187J35170_1044881	JGI24187J35170_10448811	F065815	MQPETNNPNPQANQPTKSTEETSVTDAKKNNTSTPEVEQQSKSGFYQDLNSVLLVTILSLLIYTIVGSGLSWXVSWGLAQANLYPWVFNQSPILLWAIFGLVSMLIIGVIMVQVESLVETRILPKLQKFSQPTLLLVNFLV
JGI24187J35170_1046127	JGI24187J35170_10461271	F032180	MWWKIEDVPQKELEQWVKDVDRFERDAKRDVEARAAGAFVIYWLDDALGYAAGRDAPAGAYLVERWVRGKRGWTLYE*
JGI24187J35170_1046127	JGI24187J35170_10461272	F005028	MRNEDLRAAMQFFAERLRGAQLDQARLLRWARHKLRNDAQSVAELMLTVGYRATYIRYFLRYHIRNVDPETDSEDVVLVVADLHAAAKRLRQPYRDLASVCLRWGYVHETVVQMLSKTLERKR*
JGI24187J35170_1046499	JGI24187J35170_10464991	F093914	DDVEMTRPSGEAYVGGSSDYATITIGKREPVEITLTFLYSEATGAAATAIYDQFESATPRLGVRWSPTGLVASARAYATSNDGNATGLGVITGVTLSALDPSETEPYVMMVTVRTPTLRQYAIAATNPTNLA*
JGI24187J35170_1046499	JGI24187J35170_10464992	F064295	MSEPAKIYDVDALRVDRNALTIREAATLLNRELTPEVIARLVRKAIGNQADQFPIRALKAVYERALPKIFEPDEAIRSKVAGLTPNVTTITLGEYHQFLEASERKIAFP
JGI24187J35170_1048784	JGI24187J35170_10487842	F030445	MLVAITNPHQQFPVPLSAADYEFATSDDGDERGRVTLPPALARSGVMTQIGDELVVYCTQLSRTIWRGQIERIEEATDGSITWHALGFGALQRDARISVVQNMSDMSRWRAVGAGFLSGGYDSRGDLWEYEVVSTGAV
JGI24187J35170_1049477	JGI24187J35170_10494771	F069792	MELKQTGSGRYGFFGRQTLAFLILFLLVFSLPSSNFRKSEVLVDPKTVISSNFFLKQIKPETLKNSLPSLQETKISLIFNRQXKRFLFDVSGNPVFNKTIVQAYSKSFIYETPNLDLNLETFRKAQTTKGQKMRQLP
JGI24187J35170_1052188	JGI24187J35170_10521882	F008499	MKSRSKKEPRWKRKEREAVKALQATFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNNPGFVVEVKARKKMLTKPAVQALLQTVDRAARFDRIPLFVVVFGDDVPTRTENG
JGI24187J35170_1052220	JGI24187J35170_10522202	F044842	MEEIEIWRGVRGEGFEDVERIGFIGEFLGVVDIARGDDWVERCVLYLADDGSIIAHRMRLSTIADGEDIADVHIIPALDKRAADNV*
JGI24187J35170_1052811	JGI24187J35170_10528112	F002372	REDRLWSVVHQRAMHLRALLDGLDMVDVDVRYELDYYPYAIVDLLLLRVDAPPLVLRSAYVHANRQWEYHSEWALRIIDAALLLVEEYRADPSAAGAIGV*
JGI24187J35170_1055857	JGI24187J35170_10558571	F052337	MVAGIWGQTRNMGDRTFDPADLTEPRSGGRGRLRRQDMGTDTVFDIPIRNVQRPTFNS
JGI24187J35170_1060194	JGI24187J35170_10601942	F004307	FKELIVSGGTRERPALNGAYIGRFLGVSERKRPTFETRNDPQPEYEQVFVFEFEVEDXELDAPVRVSKWVRKPTRLTHPGKSGKVTNLYKVLASLYGVAQMTDEQLAGAEDFVQNVAVGREYQLTLETKPSGWVEIVHISPVRRARQLREKPVDEVPF*
JGI24187J35170_1061321	JGI24187J35170_10613211	F032293	MRVRQIGTLVFDANTNIVVDADAQDAPGIGFHISNLDEPQPFTAEIAFKRETRQQALEAVNALARELFSYAHRRQDDHLAIAGGARVVVEDAAGAATLQSYLRDSSVTLLGVETTATGVIARARVAGTLVVPFLDY
JGI24187J35170_1066239	JGI24187J35170_10662392	F001564	LSAGEWPEKPSLRFLIHWALRREELCDPGLCPDAPDDGGRCGHCPLDRLDTAQSSEAGLLLRRALDLRAALKLGVRIDLDEIRADEMRALIMLEEEQERLDREKLNGSST*
JGI24187J35170_1067259	JGI24187J35170_10672591	F004307	MFKELITSHSGRERPALNGAYVGRFLGVSERERPTFETRNDPQPEYEQVFVFEFEVEDPELDAPVRVSKWVRKPTRLSHPGKSGKVTNLYKVLSALYGVPQMTDEQLAGAEDFVQNVAVGREYQLTLETKPSGWVE
JGI24187J35170_1069103	JGI24187J35170_10691031	F004791	AMSEPAKIYDVEAIRVDRTALTIREAATLLNRELTPEVIARLVRKAIGNQADQFPIRALKAVYERALPKIFEPDEAIRTRVAGLTPNVTTITLGEYHQFLEASERKIAFPDVAATLLVKAYGDDILNEPYAAAAPLLKRIFDAVGDEGKE*
JGI24187J35170_1074584	JGI24187J35170_10745841	F093914	DDVEMTRPSGEAYVGGSSDYATITIGKREPVEITLTFLYSEATGAAATAIYDQFESATPRLGVRWSPTGLVASARAYATSNDGNATGLGVITGVTLSALDPSEAEPYVMMVTVRTPTLRQYNIAATNPTNLA*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002491: Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant BLVA 2012

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences