Sample 3300002839

Overview

Basic Information
IMG/M Taxon OID	3300002839 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0084162 \| Gp0055559 \| Ga0049075
Sample Name	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-31A and 11-33A (Combined assembly, ASSEMBLY_DATE=20140611)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	340438145
Sequencing Scaffolds	42
Novel Protein Genes	48
Associated Families	31

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4
All Organisms → cellular organisms → Bacteria	8
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	2
All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Candidatus Cryosericota → Candidatus Cryosericia → Candidatus Cryosericales → Candidatus Cryosericaceae	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	1
Not Available	10
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → Methanobacterium paludis	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Chryseolinea	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → unclassified Prolixibacteraceae → Prolixibacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes → Paludibacter propionicigenes WB4	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp. Ant1	1
All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Candidatus Cryosericota → Candidatus Cryosericia → Candidatus Cryosericales → Candidatus Cryosericaceae → Candidatus Cryosericum	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Barrow, Alaska, USA
Coordinates	Lat. (^o)	71.290884	Long. (^o)	-156.788063	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Family	Category	Number of Sequences	3D Structure?
F004441	Metagenome / Metatranscriptome	438	Y
F009222	Metagenome / Metatranscriptome	321	Y
F010231	Metagenome	306	Y
F010394	Metagenome / Metatranscriptome	304	Y
F017253	Metagenome	242	Y
F019814	Metagenome / Metatranscriptome	227	Y
F022562	Metagenome	214	Y
F025774	Metagenome / Metatranscriptome	200	Y
F029737	Metagenome	187	Y
F029738	Metagenome	187	Y
F031313	Metagenome / Metatranscriptome	183	Y
F040026	Metagenome	162	Y
F042098	Metagenome	159	Y
F048266	Metagenome	148	N
F051905	Metagenome	143	N
F056356	Metagenome	137	Y
F067652	Metagenome / Metatranscriptome	125	Y
F070832	Metagenome / Metatranscriptome	122	Y
F074396	Metagenome / Metatranscriptome	119	Y
F076572	Metagenome	118	Y
F079367	Metagenome	116	Y
F080207	Metagenome	115	Y
F087142	Metagenome	110	N
F088556	Metagenome	109	Y
F088876	Metagenome	109	Y
F090156	Metagenome	108	Y
F096256	Metagenome	105	N
F096293	Metagenome / Metatranscriptome	105	Y
F102310	Metagenome	101	Y
F104110	Metagenome / Metatranscriptome	101	N
F106196	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGIcombinedJ43158_10000023	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes	147035	Open in IMG/M
JGIcombinedJ43158_10000085	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	90956	Open in IMG/M
JGIcombinedJ43158_10000583	All Organisms → cellular organisms → Bacteria	30227	Open in IMG/M
JGIcombinedJ43158_10001048	All Organisms → cellular organisms → Bacteria	20461	Open in IMG/M
JGIcombinedJ43158_10002135	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	12392	Open in IMG/M
JGIcombinedJ43158_10002263	All Organisms → cellular organisms → Bacteria	11936	Open in IMG/M
JGIcombinedJ43158_10002519	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	10992	Open in IMG/M
JGIcombinedJ43158_10007408	All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Candidatus Cryosericota → Candidatus Cryosericia → Candidatus Cryosericales → Candidatus Cryosericaceae	5161	Open in IMG/M
JGIcombinedJ43158_10007455	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	5144	Open in IMG/M
JGIcombinedJ43158_10010714	Not Available	3966	Open in IMG/M
JGIcombinedJ43158_10011725	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → Methanobacterium paludis	3701	Open in IMG/M
JGIcombinedJ43158_10020687	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
JGIcombinedJ43158_10021125	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
JGIcombinedJ43158_10021177	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
JGIcombinedJ43158_10021372	Not Available	2336	Open in IMG/M
JGIcombinedJ43158_10024646	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2085	Open in IMG/M
JGIcombinedJ43158_10024818	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2071	Open in IMG/M
JGIcombinedJ43158_10026029	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae	1994	Open in IMG/M
JGIcombinedJ43158_10026819	Not Available	1948	Open in IMG/M
JGIcombinedJ43158_10032349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum	1655	Open in IMG/M
JGIcombinedJ43158_10033708	All Organisms → Viruses → Predicted Viral	1598	Open in IMG/M
JGIcombinedJ43158_10033850	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae	1592	Open in IMG/M
JGIcombinedJ43158_10034619	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Chryseolinea	1558	Open in IMG/M
JGIcombinedJ43158_10036553	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1483	Open in IMG/M
JGIcombinedJ43158_10042191	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae → unclassified Prolixibacteraceae → Prolixibacteraceae bacterium	1306	Open in IMG/M
JGIcombinedJ43158_10042554	Not Available	1295	Open in IMG/M
JGIcombinedJ43158_10043700	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
JGIcombinedJ43158_10044367	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes → Paludibacter propionicigenes WB4	1246	Open in IMG/M
JGIcombinedJ43158_10055081	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp. Ant1	1030	Open in IMG/M
JGIcombinedJ43158_10056062	Not Available	1013	Open in IMG/M
JGIcombinedJ43158_10059111	All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Candidatus Cryosericota → Candidatus Cryosericia → Candidatus Cryosericales → Candidatus Cryosericaceae → Candidatus Cryosericum	969	Open in IMG/M
JGIcombinedJ43158_10061374	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	939	Open in IMG/M
JGIcombinedJ43158_10064267	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Prolixibacteraceae	903	Open in IMG/M
JGIcombinedJ43158_10065233	Not Available	891	Open in IMG/M
JGIcombinedJ43158_10078030	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	768	Open in IMG/M
JGIcombinedJ43158_10086696	Not Available	706	Open in IMG/M
JGIcombinedJ43158_10103783	Not Available	612	Open in IMG/M
JGIcombinedJ43158_10105657	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	604	Open in IMG/M
JGIcombinedJ43158_10107230	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
JGIcombinedJ43158_10124072	Not Available	535	Open in IMG/M
JGIcombinedJ43158_10133933	Not Available	506	Open in IMG/M
JGIcombinedJ43158_10135512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	502	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGIcombinedJ43158_10000023	JGIcombinedJ43158_10000023136	F076572	MKKLLISLFAIFFIVGCTTTTTPACEQDHTFSMEFTNGSNNPYDLYINGNFEQIMDAKTKVTYDIPAGYWDAEVVQRSGFNPDQIVRDYSNTYESCTDYYIVF*
JGIcombinedJ43158_10000085	JGIcombinedJ43158_1000008536	F102310	MDSIIEMSRNIDKNLGEEMIDFYCENQSYFDNFDNISEIESIEEIILIKQKYCEALESKAHYKELTVILKDIFILLAKIKSKSMKYDLYYESALFYQGIVLGRQNKYVLSNRKFKELIIIDSKNESYHNWCQTNKKKISDNRLSLCENIVMIITVFIALFGTYLPGHFNSQIMIFVFMLFIGTFSYTRLYRKRRTKQMIKNTSRTVK*
JGIcombinedJ43158_10000102	JGIcombinedJ43158_1000010250	F088556	MSIQPKEIRKDLYTQAEYAKKVGKTRSWVNLQIKSGSLKTLTVMGTTLVKV*
JGIcombinedJ43158_10000583	JGIcombinedJ43158_1000058325	F074396	MYENGKPASDVGVMIDYGLLGGTDEKRTHSDGWVEFHNRENKSGTIWVHGHKMGNHSLSDGKSYSFTI*
JGIcombinedJ43158_10001048	JGIcombinedJ43158_1000104817	F029737	MTEFEFLEELEASQKSFEKLNYIFIRDMHKYIRKSTVYDSIFFKTILNYSVDITLTAAWIKLLKDFNSVKCTSILRFSSDFNHSTGLPVAEINPTGSDKRNESMQE*
JGIcombinedJ43158_10002135	JGIcombinedJ43158_100021359	F096293	MKPMVLISTPFITFQDIKVKDIDLVEDAWGLNSEYWDVIELLRQINPVPEXCLTTCLIRKIRKKV*
JGIcombinedJ43158_10002162	JGIcombinedJ43158_100021626	F088556	MLKEIRQDIYTQAEYAKLMGKTRSWVNQKIKAGELKTLTIKGATLVKA*
JGIcombinedJ43158_10002263	JGIcombinedJ43158_1000226314	F090156	MSDNEQPLELSAELRGEVSALFAPMDRSLAGSVTAAIGMRRSRRRLLQGLWLGFSPVMAVAIVAVLYVGGAVLPRTLSLATSKRAAFAPNAEIRAQDTGPNGLVGSENFPTFATACRAPSFRVVLEGDVARRQLLVTWLRGRHADVALELATAVPGRDVALTLEPDEVQGFVALMVLHGFTGQEPSGLRIVARRSPTSWASSLGTSSLFICLIP*
JGIcombinedJ43158_10002519	JGIcombinedJ43158_100025197	F074396	MGYFSVKVIYDNGNPAKDVGVMIDYGCFTGTDEKRTNSEGWVEFHNRENKPGTIWVHGHNMGCHSLSDGKTYSFAI*
JGIcombinedJ43158_10007408	JGIcombinedJ43158_100074084	F048266	MRRLMTIMAFAGGLLGLGNYVWDGWAMASGGRNLYIPSNIVSVLLLVIAGSVAATMLLRDHGRMIEEERKEYRATLALSIAALAILSSWILFRALKVA*
JGIcombinedJ43158_10007455	JGIcombinedJ43158_100074556	F096256	VWGEAVHMTSRKLQAVLAAAIVATVLTSGCLSSLTSRSSPTATPQNLSVSYDASFVLSGWHAIXKFTQVTPKTYVGTYADEKGQSWXFTVQLFSAENTSYGRYFELMKKKSDEGYVKTNESKIALGTGQTVFGRIDEKWYGYKASDSENPALYALLFGYDENAASWVVATVASGAIITTKTTTALS*
JGIcombinedJ43158_10010714	JGIcombinedJ43158_100107146	F079367	MPINLDKVAAKIKKMLTRGDVARDAAWYKDDIAWWMGRYETLITTEAEAVVRKAMAKLNXAVALRXEGINLVEQLDRDIIEAEHEVKRLGGDAFIENSEPMIKELKVYFDNLYESLKRPQPEEVEK*
JGIcombinedJ43158_10011725	JGIcombinedJ43158_100117255	F106196	MTEXDKNETIKCTISCPECGAEMVCTHEDPKHEDKHRCAKGHEWA*
JGIcombinedJ43158_10020687	JGIcombinedJ43158_100206875	F040026	VAYSTNGSGFWWLQSAYLNVLEEQGIVSPETALPLDEIDGMINPFVRFGAFGSGWLVVHKLSRYGVLVGCPGGSYYLNQEAAEEFRHSFARWLTW*
JGIcombinedJ43158_10021125	JGIcombinedJ43158_100211252	F029737	MTEFEFLEKLEASQKSFEKLNYIFIRDMHKYIRKSTVYDSTFFKTIINFSANITLTAEWIRLLKDFNSDKYNNILRFSPDFNHSTGVPDAIKKSAGQQHQR*
JGIcombinedJ43158_10021177	JGIcombinedJ43158_100211774	F087142	MTEFQFLENLEFYQRRFEKHHHRFIRDLNLYIRNNRVHDSVFFNTVLNYSLNITLSASWIKLLKDFNSDKYTNILRFSPDFNNLNGVPDAKINPTGSGNNE*
JGIcombinedJ43158_10021177	JGIcombinedJ43158_100211775	F029738	MSQYKNDPRMITAKFSSNCSKCKTKLLKGTTIYYWPSSREVFCTKCGEGPYRQFLSSAADEDVYNGCGNPYAY*
JGIcombinedJ43158_10021372	JGIcombinedJ43158_100213723	F067652	MNVGDPNGTGLGHLLPRESDMPVVVKITEKVKAVGAKGHYYKQSFKEC*
JGIcombinedJ43158_10022236	JGIcombinedJ43158_100222362	F104110	MYLGKDVTTEDDMELGKVSDVSISSSGEVYYLVEKGEDPNIRYYFTQEDVLTSNXRVVXRSVGEFTDDTAKRSHFLCALYGVEVRDXTNKRVGVLDNFVAXPEGALVVIEDAKGNALVGRYRDLDLTRLSKFATLKQLPAQDSFDQYLKGMNKDALLTKGISCDLSSVAKDEGLLSRIRKKLAQSEEDRIITDQALID*
JGIcombinedJ43158_10024646	JGIcombinedJ43158_100246464	F017253	STLTHNVGSYTQGRIAGDFLSSRKAARAERCPPKTTVAGLAG*
JGIcombinedJ43158_10024818	JGIcombinedJ43158_100248184	F029738	MSQYKNDPRMITAKFSSSCSICKTKLLKGTSIYYWPSSREVFCTKCGEGPYRQFLSSAADEDVYNGCGNPYAY*
JGIcombinedJ43158_10026029	JGIcombinedJ43158_100260293	F029738	MSQYKNDPRMITAKFSSSCSKCKTKLLKGTSIYYWPSSKEVFCTKCGEGPYRQFLSSAADEDVYNGCGNPYAY*
JGIcombinedJ43158_10026819	JGIcombinedJ43158_100268194	F080207	MRKTSIGVXLCLVLIGTLTAITGVTAAPTDDSAIQRFDIAMGDYKYGKLTVDTETDQFVANAHVGKQSADEQVTLVARKDGASPHYVVIARSTVNDGGRVHWEGTLTEAQXDWIHSYGYGEVFF
JGIcombinedJ43158_10032349	JGIcombinedJ43158_100323493	F009222	MARAVMKLHLKKDQLHKDVGKAPGAKITVADIATEKAKGGVFAKRAQFAENAKKWNHQSKAKP*
JGIcombinedJ43158_10033708	JGIcombinedJ43158_100337081	F088876	MAVVKKALLIEYELEFLENQLQELKEYIEANPYSLLADRMQSKVTKNGGIVLVCVANKEAQRKDLTQALKDYAEILRTVDSMREKDEVKKVARGTGIVPPRMQ*
JGIcombinedJ43158_10033850	JGIcombinedJ43158_100338503	F087142	MTEFQFLENLEFYRRRFEKHHHKFIRDLNLYIRNNRVHDSVFYNTVLNYSLNITLTASWIKLLKDFNSDKYTNILRFSPDFNNLNGVPGAKINPTGSGINE*
JGIcombinedJ43158_10034619	JGIcombinedJ43158_100346192	F042098	MKKLIYLFIMVVLSVLRTSAQETGKAQEYKVPAAYRFDYKVVYEINNEEKKAPETANYYFTKNGDYMSMETADSQKEKDMNFMIRTKDGMMITFGEESVPKNPDKNRKVLKVMDMHSMMKGSGEAMAALAKDMPGKEKADAEKKKPNEMDNFVKTGKTKQVFGYTAEEYSKEITKEENGKVHSGTMSVWYAKVDFDPEMMFSLGMGNLAGGQSQSKMHPNNMIGLGMTQKNYLMVEMDYAEKGGKSGTGMKVVGIEKTNFSKSTEGYYVKNYAGMSMKEMMQKENEER*
JGIcombinedJ43158_10036553	JGIcombinedJ43158_100365532	F076572	LYKNNIVNTKSKNDMKKLLICLFIVFLTMGCTKISTPTCEQNNTFSMEFTNGTNDPYDLYINDLFQQIVEAKSKVTYTIPAGYWSAEVVQISGYTLYQTDKVFSGTYQSCTSYYIVF*
JGIcombinedJ43158_10042191	JGIcombinedJ43158_100421912	F087142	MTEFQFLENLEFYQRRFEKHHHTFIRDLNLYIRMNRVHDGVFYNTVLNYSLNITLTASWIKLLKDFNSDKYNNILRFSPDFNNLNGVPDAKINPTGSGKNK*
JGIcombinedJ43158_10042554	JGIcombinedJ43158_100425543	F076572	LYKNNIVNSKSKNNMKKLLICLFIVFLTMGCTKISTPTCEQNNTFSMEFTNGTNDPYDLYINDSFQQIVEAKSKVTYDIPAGYWSAEVVQISGYTLYQTDKVFSNTYQSCTSYYIVF*
JGIcombinedJ43158_10043700	JGIcombinedJ43158_100437003	F070832	VTDSLHRDSFKISTNANNAGIGNKLVTIFARHLDSFILTQNISSVYQIRKSGSGQILKPRQLYRSPGLAKIAPCWLARRDSFSAKVSGLVSADG
JGIcombinedJ43158_10044367	JGIcombinedJ43158_100443671	F010231	THAYVHWLADVHSGSFAPAFTLSFHDSERSRKPPNAHSLGRYGL*
JGIcombinedJ43158_10052142	JGIcombinedJ43158_100521421	F104110	MYLGKDVTTEDSMELGKVSDVSISSSGEVYYLVEKGKDPNIRYYFTQEDVLASNERVVTRSVGEFTDDIAKRSHFLCALYGVEVRDTTNNRVGVLDNFVASPQGALVVIEDVKGNALVGRYRDLDLTRLSKFAILKQLPAQDSFDEYLKDINRDALLTKGISCDLSSVAKDEGLLSRIRKKLAQSEEDRIITDQALID*
JGIcombinedJ43158_10055081	JGIcombinedJ43158_100550811	F051905	LLKNYIITSSRNDETIISSISVTDIVFDVYLGKWNYRAIPKVKTWSYFLTI
JGIcombinedJ43158_10056062	JGIcombinedJ43158_100560621	F080207	RKTSIVVALCLVLIGTLTATTGVPAASTDDSVIQRFDIEIGDYKYGELAVDTETDQFVADANVGKESADKQVTLVARKEGAIPHYVAIARSIVNNGGQVRWKGTLTAAQLDWVQTYGDGAVFFVRSNY*
JGIcombinedJ43158_10059111	JGIcombinedJ43158_100591112	F048266	MRRLMTVMAFAGGLLGLGNYVWDGWTMVSGGRNLYVPSNIVSVLLLVIAGSVAATMLLRDHGRMIEEERKEYWATLAISVAALAILSSWILFRAARTA*
JGIcombinedJ43158_10061374	JGIcombinedJ43158_100613742	F087142	MTEFQFLENLELYQRRFEKHHHKFIRDLNFYIRNNRVHDGVFYNTVLNYSLNITLTASWIKLLKDFNSDKYNNILRFSTDFNNLNGVPGANINPRGSGNNE*
JGIcombinedJ43158_10064267	JGIcombinedJ43158_100642671	F087142	QRRFEKHHYKFIRDLNLYIRINRVHDSVFFNTVLNYSLNITLTASWIKLLKDFNSDKYNNILRFSTDFNNLNGVPDAKINPTGSGNHE*
JGIcombinedJ43158_10064267	JGIcombinedJ43158_100642672	F029738	MSQYKNDPRMITAKFSSNCSKCKTKLLKGTSIYYWPSSREVFCTKCGEGPYRQFLSSAADEDVYNGCGNPYAY*
JGIcombinedJ43158_10065233	JGIcombinedJ43158_100652331	F096256	SSLPLGSTPTATPQDLSVSYDASFVLSGWHAISKFSQIKPKTYVGAYADAKGQSWNFTVELFSAENTSYNRYFELMKTRSDEGYIKTTESKIALGTGQTVFGRIDEKWYGYKASDSANPTLFALFFGYDKTADSWVVATAASGATIITQPTTALS*
JGIcombinedJ43158_10078030	JGIcombinedJ43158_100780302	F025774	VKLYVFAAKPDIVVLVDDPAIPPGLIVQLPEGNPLNTTLPVVSAQVGCVIVPMTGAVGVEGCALMTTLPDAGEVHPAALVTV*
JGIcombinedJ43158_10086696	JGIcombinedJ43158_100866961	F019814	LHKKVSPPFEGGVVGTIDYLIYTEFYFPTGVVDSLISFYLY*
JGIcombinedJ43158_10103783	JGIcombinedJ43158_101037832	F025774	LIVQLPAGKPFNTTLPVANAQVGCVIVPTTGAVGVEGCALMTTLPDAGEAHPAALVTV*
JGIcombinedJ43158_10105657	JGIcombinedJ43158_101056571	F056356	LTLFASCGRDLEQTKRYSDIKSETDSLISQANLIINEQNVMYDSLVKIRNDIYKVNTQKYKSPELDKKITKAVEIKSNIENVRKHLEAIKKFAENGEKATKRLIFYKRKYITYATEIQIHDENIMIQEITGGLSARKYISKYLPKEKK*
JGIcombinedJ43158_10107230	JGIcombinedJ43158_101072301	F004441	DQSAKNPIKVDTKNIAVIVDAANCRWSAKVKGTAMQMNDVFFLPGDDPSGWKVTSSVKKNDSNKLGSFVTVNLHGTKSGQLDFDYQISVSQNYNDIIVSLGRTNTTGKSVDLQDMDYFVSNDTRLGSTTDRWISLGTQSQNRELYDLWPVINLITPRMYIVNHVIRDSDTGNSLLMGHVTANKGASRFEISSGWQGKTP
JGIcombinedJ43158_10124072	JGIcombinedJ43158_101240722	F022562	MKTTDKSAETKRNFDQLISKFSENEILNTQAMSYVKGGSAEGEGNG
JGIcombinedJ43158_10133933	JGIcombinedJ43158_101339331	F031313	VPGDKTVRVPQYFINETEVTRIDFGAGYKAVLGWRKAIN*
JGIcombinedJ43158_10135512	JGIcombinedJ43158_101355121	F010394	MSETRNLRNPGPGDVDAWRAEFDELDLRMDALRQAFLDGVRSFTMSDETVERIHARFDDVGEQLHKMHCTYPFGGWPGQEDCRF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002839: Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-31A and 11-33A (Combined assembly, ASSEMBLY_DATE=20140611)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences