Sample 3300002934

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300002934

3300002934: Ant worker gut metagenome for colony PL005

Overview

Basic Information
IMG/M Taxon OID	3300002934 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0085494 \| Gp0095985 \| Ga0052914
Sample Name	Ant worker gut metagenome for colony PL005
Sequencing Status	Permanent Draft
Sequencing Center	Harvard University
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	9303833
Sequencing Scaffolds	0
Novel Protein Genes	3
Associated Families	2

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Saline Water Microbial Communities From Bras Del Port Salterns, Alicante, Spain
Type	Environmental
Taxonomy	Environmental → Aquatic → Non-Marine Saline And Alkaline → Salt Crystallizer Ponds → Unclassified → Salt Cristalyzer Pond → Saline Water Microbial Communities From Bras Del Port Salterns, Alicante, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut

Location Information
Location	USA: Big Pine Key, Florida
Coordinates	Lat. (^o)	38.1923	Long. (^o)	-81.3617833	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F054614	Metagenome / Metatranscriptome	139	Y
F055821	Metagenome	138	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link

Sequences

Scaffold ID	Protein ID	Family	Sequence
CVPL005W_1034717	CVPL005W_10347171	F055821	VVKIVAKLINCTKEEQRSVICFLWTEDVPEPQIHFRICSMDKILSRRIVYEWIEMFKNDHTSVTVVKRPDVQLQP*
CVPL005W_1056535	CVPL005W_10565351	F054614	MSLILTLTGKSNVLATTYFPVIDLSDDDYELGLMNFETYNTISNVNASNNKFYYGENDVEITIPEGSYELSAIID
CVPL005W_1087049	CVPL005W_10870492	F054614	MSLTFTLTGKSSILTVSYFPAVDLSDGDYELGLTDFETYYTIPNVNSWNNKFYFDKDDKEIVIPEGSYELHDINKYLKRT

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