Sample 3300004107

3300004107: Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/8/14 3 um filter (version 2)

Overview

Basic Information
IMG/M Taxon OID	3300004107 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111384 \| Gp0097052 \| Ga0065179
Sample Name	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/8/14 3 um filter (version 2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	509932544
Sequencing Scaffolds	62
Novel Protein Genes	67
Associated Families	49

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	1
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_60_12	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Desantisbacteria → Candidatus Desantisbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_40_23	2
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Huberarchaea → Candidatus Huberarchaeum → Candidatus Huberarchaeum crystalense	4
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Moranbacteria → Candidatus Moranbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_39_10	1
Not Available	34
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1
All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	1
All Organisms → cellular organisms → Archaea → DPANN group	3
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYPR2.512	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → unclassified Streptococcus → Streptococcus sp. SR1	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Development Of A Pipeline For High-Throughput Recovery Of Near-Complete And Complete Microbial Genomes From Complex Metagenomic Datasets
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater → Development Of A Pipeline For High-Throughput Recovery Of Near-Complete And Complete Microbial Genomes From Complex Metagenomic Datasets

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater biome → aquifer → groundwater
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	USA: Utah
Coordinates	Lat. (^o)	38.9383	Long. (^o)	-110.1342	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000320	Metagenome / Metatranscriptome	1306	Y
F001258	Metagenome	735	Y
F001506	Metagenome / Metatranscriptome	681	Y
F002184	Metagenome	585	Y
F002857	Metagenome / Metatranscriptome	525	Y
F003801	Metagenome / Metatranscriptome	467	Y
F004515	Metagenome	434	Y
F006336	Metagenome / Metatranscriptome	375	Y
F007630	Metagenome / Metatranscriptome	347	Y
F008119	Metagenome / Metatranscriptome	338	Y
F009732	Metagenome	313	Y
F009876	Metagenome	311	Y
F011639	Metagenome	288	Y
F014684	Metagenome / Metatranscriptome	261	Y
F016244	Metagenome	248	Y
F019952	Metagenome / Metatranscriptome	226	Y
F020302	Metagenome	224	Y
F030345	Metagenome	185	Y
F034978	Metagenome	173	Y
F035627	Metagenome	171	Y
F036548	Metagenome / Metatranscriptome	169	Y
F039194	Metagenome	164	Y
F039930	Metagenome / Metatranscriptome	162	Y
F040468	Metagenome / Metatranscriptome	161	Y
F047486	Metagenome	149	Y
F047487	Metagenome / Metatranscriptome	149	N
F049413	Metagenome / Metatranscriptome	146	Y
F050144	Metagenome	145	Y
F050466	Metagenome	145	Y
F050899	Metagenome	144	Y
F055292	Metagenome / Metatranscriptome	139	Y
F062440	Metagenome	130	Y
F063344	Metagenome	129	Y
F068437	Metagenome	124	Y
F069685	Metagenome	123	Y
F071917	Metagenome	121	Y
F076868	Metagenome	117	Y
F078228	Metagenome	116	Y
F080879	Metagenome	114	Y
F086649	Metagenome / Metatranscriptome	110	Y
F089865	Metagenome	108	Y
F091324	Metagenome / Metatranscriptome	107	Y
F092305	Metagenome	107	Y
F093503	Metagenome	106	Y
F094907	Metagenome	105	Y
F096624	Metagenome	104	Y
F100367	Metagenome	102	N
F102531	Metagenome	101	N
F104464	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0065179_1026050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	1963	Open in IMG/M
Ga0065179_1033423	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
Ga0065179_1039477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_60_12	1557	Open in IMG/M
Ga0065179_1039499	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1557	Open in IMG/M
Ga0065179_1039720	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
Ga0065179_1042505	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1495	Open in IMG/M
Ga0065179_1045832	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Desantisbacteria → Candidatus Desantisbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_40_23	1430	Open in IMG/M
Ga0065179_1046838	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1412	Open in IMG/M
Ga0065179_1053248	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Huberarchaea → Candidatus Huberarchaeum → Candidatus Huberarchaeum crystalense	1311	Open in IMG/M
Ga0065179_1062229	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Moranbacteria → Candidatus Moranbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_39_10	1196	Open in IMG/M
Ga0065179_1063449	Not Available	1183	Open in IMG/M
Ga0065179_1068412	All Organisms → Viruses → Predicted Viral	1132	Open in IMG/M
Ga0065179_1076033	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1063	Open in IMG/M
Ga0065179_1077502	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Huberarchaea → Candidatus Huberarchaeum → Candidatus Huberarchaeum crystalense	1051	Open in IMG/M
Ga0065179_1083170	Not Available	1008	Open in IMG/M
Ga0065179_1088809	Not Available	969	Open in IMG/M
Ga0065179_1091619	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	951	Open in IMG/M
Ga0065179_1092649	Not Available	945	Open in IMG/M
Ga0065179_1099224	Not Available	906	Open in IMG/M
Ga0065179_1106797	Not Available	867	Open in IMG/M
Ga0065179_1113251	Not Available	837	Open in IMG/M
Ga0065179_1113989	Not Available	834	Open in IMG/M
Ga0065179_1118061	Not Available	816	Open in IMG/M
Ga0065179_1119003	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Huberarchaea → Candidatus Huberarchaeum → Candidatus Huberarchaeum crystalense	812	Open in IMG/M
Ga0065179_1119688	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
Ga0065179_1124098	Not Available	792	Open in IMG/M
Ga0065179_1124508	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	790	Open in IMG/M
Ga0065179_1142860	All Organisms → cellular organisms → Archaea → DPANN group	726	Open in IMG/M
Ga0065179_1147453	Not Available	712	Open in IMG/M
Ga0065179_1147629	All Organisms → cellular organisms → Archaea	711	Open in IMG/M
Ga0065179_1148860	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	708	Open in IMG/M
Ga0065179_1149898	Not Available	705	Open in IMG/M
Ga0065179_1165241	Not Available	663	Open in IMG/M
Ga0065179_1165403	Not Available	663	Open in IMG/M
Ga0065179_1174967	Not Available	640	Open in IMG/M
Ga0065179_1177113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	635	Open in IMG/M
Ga0065179_1179509	Not Available	630	Open in IMG/M
Ga0065179_1181268	Not Available	626	Open in IMG/M
Ga0065179_1181400	All Organisms → cellular organisms → Archaea → DPANN group	626	Open in IMG/M
Ga0065179_1185391	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	617	Open in IMG/M
Ga0065179_1199647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Desantisbacteria → Candidatus Desantisbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_40_23	589	Open in IMG/M
Ga0065179_1200792	Not Available	587	Open in IMG/M
Ga0065179_1200877	Not Available	587	Open in IMG/M
Ga0065179_1201751	Not Available	585	Open in IMG/M
Ga0065179_1204594	All Organisms → cellular organisms → Archaea → DPANN group	580	Open in IMG/M
Ga0065179_1205737	Not Available	578	Open in IMG/M
Ga0065179_1206291	Not Available	577	Open in IMG/M
Ga0065179_1221044	Not Available	552	Open in IMG/M
Ga0065179_1224849	Not Available	546	Open in IMG/M
Ga0065179_1228897	Not Available	540	Open in IMG/M
Ga0065179_1229634	Not Available	539	Open in IMG/M
Ga0065179_1235481	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Huberarchaea → Candidatus Huberarchaeum → Candidatus Huberarchaeum crystalense	530	Open in IMG/M
Ga0065179_1236094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYPR2.512	529	Open in IMG/M
Ga0065179_1236250	Not Available	529	Open in IMG/M
Ga0065179_1237583	Not Available	527	Open in IMG/M
Ga0065179_1238210	Not Available	526	Open in IMG/M
Ga0065179_1239157	Not Available	525	Open in IMG/M
Ga0065179_1243219	Not Available	519	Open in IMG/M
Ga0065179_1243415	Not Available	519	Open in IMG/M
Ga0065179_1248697	Not Available	512	Open in IMG/M
Ga0065179_1254738	Not Available	504	Open in IMG/M
Ga0065179_1257784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → unclassified Streptococcus → Streptococcus sp. SR1	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0065179_1026050	Ga0065179_10260504	F011639	MSEQTVWVDKKFVRPRLSPDELWLLYRLIDGQYWLLRRHPHPLWSLEKVSRLRRKLLRSVNRFRESKYQLSLRERVY*
Ga0065179_1033423	Ga0065179_10334232	F078228	LPKFTMSLSEEMMKAIKEEKKKRKLGSIQETIRSILAEYFAKKS*
Ga0065179_1039477	Ga0065179_10394772	F092305	MRQLTWSCNKTGTLNGKVGFITLFTIAYYPERGYFLVPKLPGLNKTIQVNTEEEGKYQAEVIYKRYINYLLGGEWQ*
Ga0065179_1039499	Ga0065179_10394992	F050466	LEKFIRPIRNASSPGTLAALSLAVLRIGGTEFPTALKLGLVLGAILFLLSAFFIFFYSIYPTSRTLWIGTAITFLLGLFCLILSSVAFLVVII*
Ga0065179_1039720	Ga0065179_10397202	F080879	MKPEKKAEKITGYILLVIGLILIIIPALLALWMFLSGAQIPQLVPVPTGETNELIKSMVIFSNVCLLFFIFIIIVWAGSIISSRGLTLIKDVKLKLVGKSLQEAAEVAEKVKG*
Ga0065179_1042505	Ga0065179_10425052	F011639	MVEETVWVKRKYVRPRLNSDELWLIYRLIDNQYWLLRRNPHPLWDLEKVAKLRRKLLRLVNRYHTPKYQISLRQRLY*
Ga0065179_1045832	Ga0065179_10458321	F000320	MKNTKMSRSKGDKAEVLCMEILRKITDIGQKTYKLKKDVNDICGIILRKPGGTFFFEGRKAELWKEASDDFSQQWKEIGAEKYEVECMVHLMYDLVLQKEEKCRGKIVLSTKRRATSVVK
Ga0065179_1046838	Ga0065179_10468382	F091324	MSVHLHTTIKKKTNEIIEELAKTYGTKNRVLEQAVETLLRVEKVGSCEDCVIKAKMNEQTKLREALDLTSLGRKTLDGLLEVAVGDKTIQDFIKEQKAESKNIIEILRGTIEWKTPSNFKEFTIILEEIRNLTQMFDIASHSEIENTVILRPKAFKRLPEVVAFQTAVMLEGVGAPFEIRMMGEDIAVKMIRQEIYPLRKKEFGESLDQQIEKRLATSRPGLFKNSL
Ga0065179_1053248	Ga0065179_10532482	F063344	MEKAIYSGHQNIQRYKISNEYSVMFFTIGRCAFFRYFEDDGIDVSSIDRSCVLPMLSGEKIEKLSKFLDEIKKEYNNYIF*
Ga0065179_1062229	Ga0065179_10622291	F016244	MVLPILPGIIILGGVRILASYGTQLLRFIVANPKILLGTATVATVADALKEHEKNEETRNAILQDIYTQNPELAEKIVSAGGFSFHPIENIFQMAISSAIVGLIIYAIIQKI*
Ga0065179_1063449	Ga0065179_10634492	F089865	MEITGFISIGLMIVIQIGYFAFSFGKLNEKVTSIDKRFNDLSHSYEKIEGRLGKLEGRK*
Ga0065179_1068412	Ga0065179_10684123	F086649	MPNPAMDNLTSESTDQQVQDAISAEIELCMNQPPPPGAENQQKYCAGKAYGMAREKTGKELNLGK*
Ga0065179_1076033	Ga0065179_10760332	F001506	ENRCKCNEEISVIKKRKSTSRSEGKPLQYPKSSEIKCKTFQIKYDGHLSVIAKFILNSFQNKYIYYAMDDILYQFGLDSNEYETLLAVLYSPVISLQNNYSVNFFDIWVSEIYIEEGSKPNKFFTDKDYQTQTLTQFTYITVKFFYKTKVPTKKQESLW*
Ga0065179_1077502	Ga0065179_10775023	F096624	MVQTVRTVRLILGEKIILFEKPRVLRRIFFSIQQISGSSNWAPSVISLGDPQFLSYYEITAAANYFEAKGKDIFQGDIWLRNDATEYQYYTSTEILH*
Ga0065179_1083170	Ga0065179_10831703	F016244	MAIPLIPAGIYILGGARILASYGTQLLRFISLNPKISAGTATVAMVADTLKEQEKNEQTRNSILQDIYTQNPELAEKIVSSGEFSFKPAENIFQMAISSAITGLIIYAIIQKI*
Ga0065179_1088809	Ga0065179_10888093	F016244	MAIPLIPAGMYILGGIRILASYGTQLLRFISLNPKISAGTATVAMVADALKEHEKNEEIRNSILQDIHTQNPELAEKIVSAGGFSFHPVENMFKIAISSAITGLIIYAIIQKI*
Ga0065179_1091619	Ga0065179_10916192	F009732	LRKTLSEVEFEEMKDKSFELILVVEMLCEVCEKPLSTRQKFLRNVQISSRDYYQNLLNSVKVHDRAEIDVEGGKIYFYDHDFPGDVHSECVEKL*
Ga0065179_1092649	Ga0065179_10926493	F016244	MVLPILPGIIILGGVRILVSYGTQLLRFVIANPKIIIGSATVSTIADALKEHEKNEQTRNAILQDIYTQNPELAQKIASAGGFSFKPIENIFQMVTSSAIAGLIIYAIIQKI*
Ga0065179_1099224	Ga0065179_10992243	F016244	MAIPLIPAGIYILGGVRILASYGTRLLGFIAANPKIAAGTASIAMVADVLKEQEKNEEIRNSILQDVYTQNPELVGKIVSAGGFSFHPVENMFQIAISSAITGLIIYAIIQKI*
Ga0065179_1106797	Ga0065179_11067972	F047486	MQSKTGEFVTELEAHDIEESHLRSIELYEEYSQRTIADTIRIRRENFAKTYLKARRELLTEVEREVKNFRTWLEETKNLERNTAHYYSVSLKSLLLGLPVGVQVARFFGTIMDKLARK*
Ga0065179_1113251	Ga0065179_11132512	F089865	VEISGFVSIGVLIVIQIAYFAYTFGKLNGKVASIDKRLNDLTHRYDRMEDRIGRMEGRK*
Ga0065179_1113989	Ga0065179_11139891	F002184	MKYMAKYSPVCWDNSVKSIQKQCQQTLHTKELCSIACKDNCALSENTLSQTNIISKGF
Ga0065179_1118061	Ga0065179_11180611	F089865	MEANALAGFVSIGLLVVIQIAYFAYTFGKLNGKVASIDKRLNDLTHRYDRMEERLGKMEGRK*
Ga0065179_1119003	Ga0065179_11190032	F003801	MKNTKSKVYIFSAPIDQIKKHILSISMTKIKKVITMTNKIREDIYEFDQRISIAPPPETDVEQEKKTKKIDNFQQEIEKRWEEVWHIKEEIHTITDIIYELSQIRRKYICVAE
Ga0065179_1119688	Ga0065179_11196882	F093503	MKKYKVKIKHTDKEEIIKADSELEARVKFCEQNNLNYRHLAGKLEITLNNKPLLNNL*
Ga0065179_1124098	Ga0065179_11240982	F039194	IFKTQVGMFDPVALQNHNVCIHYVQKSYYRKVDFLEGIPAFQCIDITAGAGLAALTVTGRVNVTNLEMADNEFGLWRWYPIDDAQVRLYHPAGIAKYQLRNLQVPVDMNIVLRDPNLVSTEIAVWQNNRPGVEAINGHAFALGAVRLIAIGYRFHSVDLESGKNADPMLVKAIKEGKAPCTDIWCSGRGTGD*
Ga0065179_1124508	Ga0065179_11245081	F014684	MKQKWHRYYYRVIGFALAGAGGGLILDELIHGPFTLTPANHEFWGLVALVVGSILISK
Ga0065179_1142860	Ga0065179_11428602	F050144	MKKAKASVGVVLTQMEKIKKGILNMTLKKIENIQETSDDIDRMNLEFYNIVGKTQGPQTVFEQHRTTIKIDTFRRDIGKRWAEN
Ga0065179_1147453	Ga0065179_11474531	F102531	QVQSVAQQGLTELSFASSILNLPNADNSAGWTLGTYGGQTNVIQPQKTVAGINQEIDKLVANGVDKLEAIRQVGSVSVPDYAATPEQIAQLQLADKARTADEILQCPYTWCRHNSTVSDAILESRGYQPYRAAMMMQTTEGLSAGGHQVSAIIVNGEPVFIDLTNNLIIPGQQALEQILLNSGKQLTALEMIRLTTNNVWDVINLIPK*
Ga0065179_1147629	Ga0065179_11476292	F039930	LTLSELVKMLADFAEIAVTILLAYVVYKIARLIETLNSKIREEKS*
Ga0065179_1148860	Ga0065179_11488602	F071917	MKVEKKIISYLYEYGNTRESDIINYGVKKFDYSSEEMKKVIKRMVIKGKIHYIVHSKLEPPEVYISLKELLPPEIVKTLIEAFIQMKAGEEDVQKILDEAASIAEQIKQKHSRK*
Ga0065179_1149898	Ga0065179_11498982	F009876	FLGSAPNSGRGILPRRSGWKPLPLFRWIPTEHFKAGIET*
Ga0065179_1160335	Ga0065179_11603352	F035627	MKNISASVGAVPTPEKEIEEKEYTWKTNETLFYLQENTDCYVVAGGEWHGTKAGEVVGSVDIYFRHILTSKRCKSVWDAVDGYATFDGRWADDFEKIAMHIEDLPNLEEIIRTERSMMMPAK*
Ga0065179_1165241	Ga0065179_11652411	F094907	MEDFPDTLRVCFVPARNGSDVICRLPSGKVAFPSRFYWNQPPPRPYEIWVVRPCGETASVGYVKPIQRLAEAPFRDSRAGRLGNSVLLRLGRALARLVGFWRRPDADTRLRGEKQGD*
Ga0065179_1165403	Ga0065179_11654031	F000320	MENIKMSPTKGGKAEVLCGEILRKINQIGQKTYKLKKDVNDICGLIMSRPGATMFVEGYKAELWKEASDDFSQRWKEINAEKYEVVCMVHLMYDLVLREEIKRKGKIVLNIKRRAMSMVK
Ga0065179_1174967	Ga0065179_11749673	F047487	MTTLYGYIAAIVLIVFLGAGWAHEHDKRIVFEAQVEQAGKDAAKHTAEIDAKHLEEMKNAEQNTIIATNSIADWYRAHPAVRVRYANADCSAVPSTDNNPGIPDDSTASGYVSPYSPESTEQVASRLD
Ga0065179_1177113	Ga0065179_11771132	F004515	MAQTVLSKTILAGQKSKLLKKPLVLNRVFFSIRALADDAAWYKSMVSFGDPLFRSFFVLNGPGKYFEARGEGIFQGDVWVRNTSDQNL
Ga0065179_1179509	Ga0065179_11795091	F016244	MAIPLLPAGMYILGGLRILASYGTQLLRFISLNPKISAGTATVAMVADALKEHEKNEEIRNSIIQDIYTQNPELAKKIVSAGGFSFKPIENIFQMAVSSAIVGLLIYAIIQKI*
Ga0065179_1180931	Ga0065179_11809311	F104464	MAKIILLIEGEVKDGEEMRLLEQVFNKLATLFQVEIRNIAPKEQKK*
Ga0065179_1181268	Ga0065179_11812681	F096624	MVQTVRTVRLIPTEKIILFEKPHVLRRVFFSIRQISGSTSWAPSKISFGDPQFLSYYRITATANYLEAKGDDIFQGDIWIRNDAGEFQYYASTEILH*
Ga0065179_1181400	Ga0065179_11814002	F040468	MKDTKESVYIFSAPVDKIKEHMLCRSMAIIKKIITKTNKIREDIYEFDRQIDIAPPSKTDAEKEKKTEKIDNFQREIRKRWEDVWRLKEEI
Ga0065179_1185391	Ga0065179_11853912	F076868	LNGQRPSGEIKKDVSDNESALTANEPEVEQKSSATATTMSAGKVIIKAYLNLGGCGEEVINLLDGLVKEYQGRVSLGYIDFGTREGYNRMIEDGLNCQGLVINGKQTYAIIDKNGAQKEVTFSHPLNSQYTADDLKTVVKMLLGE*
Ga0065179_1199647	Ga0065179_11996471	F062440	MKNTKMSQNKGDKVEMLGLEILKKINGIGHLTYKLKRDVNDIYGIILSKTGAHISADGHKADLWKASFDDFSQRWKDLEVKRYEVECLVNLMYDLVKQEDEKRWGKIKMIIK*
Ga0065179_1200792	Ga0065179_12007921	F050899	NSLKEKNGGEKMLEKLRGKMKKGLMLFAIVAVILMGTAVLPGCNKEQPVEADELVVPESMSSYEVFNTTANAGPQIKTWPFWQGGWSAEYMDPYGMPQGASEEQFIVAFGAMLAEGFYTKRDGKQAGAGLFKSVLWITILRYENPESAKRSFINISETQELQDSTYGGIALKNGTHTLTWWEEESEDWDESTMPC
Ga0065179_1200877	Ga0065179_12008772	F001258	GEGKKYIRKENEVIFCLEEAPEYRISAVARWGENALGEIVEQPDIYFRHISSGRLCQSVYACTVGIEHDQYAAEKWDTLYYRIRTMLLRDLRRIVCGEKKYEIHPI*
Ga0065179_1201751	Ga0065179_12017512	F034978	MEGIQIRVSKEVIEEFKESILWADIVEELKLWKEGFNREMQSIVEDAESANPSTASILLHMGDLNGRQKAVDYFLSLPDVFIDLLNTKKEEEMPSQQELEM*
Ga0065179_1203024	Ga0065179_12030241	F002184	MKYMAKYSRVWDYDVKPIQKLSQQTLYEGELCSINTIKDNPKLFENTL
Ga0065179_1203024	Ga0065179_12030242	F049413	VRNMVQTLHSITVLAGEKKLLLEKPLVLRRIFFSIRVLAPYDEWHETKISFDDPKFNSFYVLDESARYFEAKGEDICQGDIWVLNVSNMNLLHTTTEILH*
Ga0065179_1204594	Ga0065179_12045942	F068437	MENTKESVYIFSVPVDKIKKHILCRSMAIVHKIITKTNKIREMNYEFDKLMDIAPPPKTDAEQEKKT
Ga0065179_1205737	Ga0065179_12057371	F030345	MELKNERILIQTIEKRDRENESSWYAITGNQGRRFSCFEEEVAKKLQINKVNLCKVRYFGKYANVMSVEGYEDKPEGADANSEMRKERNIESLRILKCVALKCAAQCFDGQSASAGEVIAKSNAFLKWLFSIEDKDAI*
Ga0065179_1206291	Ga0065179_12062911	F007630	RKDPRFIANAALKNTILTEVKTACDELLTACQQHTEYVTAIKLPLNQT*
Ga0065179_1221044	Ga0065179_12210441	F004515	MVQTVISRTLLAGGKMILLEKPCVLSRIFFSIRAIADQSTWYQSRISFDDPLFHSYYVLDGPAKYFEAKGEGIFQGDVWVFNASDQNLQYTATEILL*
Ga0065179_1224849	Ga0065179_12248491	F008119	SVYDEVFVCTEKTDKSIAHSVRGVITIGVKRTSGNGNVYVDKINMNIGYINNTGAFISVCNAFATHAFSTTSEDYVELCLQDFVEVVNDYSLTGNRFAVEIRIYACVNPGTTGQLEMYHTRGSADSYVEVELL*
Ga0065179_1226138	Ga0065179_12261382	F100367	VWGVFLTEVDEDVRFERDSEWLSKHYRDLQADYPNKYVAVLDERVVGVGDDGEKLYVEVVGKHGRDPVIDFIKDTKTIQVGRLRARVLV*
Ga0065179_1228897	Ga0065179_12288971	F004515	MVQTIYSVTISAGEKRIMIGKPWVLRRIFFSIRALADQTVWYKSMLSFDDPLFRSFYVLNGPAKYFEAKGEGIFQGDVWILNASDQNLEYTATEILI*
Ga0065179_1229634	Ga0065179_12296342	F019952	MILLEKPRVLRRIFFSIKVPTDLTMGYRSHISFDDPAFRSYYVFDGQVQQLEAKGEGICQGAIWAQNVSSVDLVFVMTEVL
Ga0065179_1235481	Ga0065179_12354811	F036548	MVQTVKSEKISAGHKKIIFEKPLALRRIFMSIKPLAPVEAWCESKISFGDPMFYSYYTMAGHAKYFEATGEGIFQGDVWVFNASGGDVKYTMTEILV*
Ga0065179_1236094	Ga0065179_12360941	F055292	KSHPATFAPAGSNQSSHGGNEMAEASGVEGHIGDLASVQAVT*
Ga0065179_1236250	Ga0065179_12362501	F002184	MKYMAKYSPVCWDNSVKSIQKQYQQTWYARELCSISDKDNYSLPQNTVS
Ga0065179_1237583	Ga0065179_12375831	F006336	SAINQIAEKKKERRAVIIQEKILANFSNTCVNFIKEYFFIYDHTIFSAMKYMNTSLSEIRKDPRFIGNAVLKNTILTEVKTACELLCRNADILPTKHITAIKLPQNQT*
Ga0065179_1238210	Ga0065179_12382101	F002857	DETTEMKASMKFLSDRNFIERISLRDGMRRKFTMVKDERTEIIGFDGQKKQGITYTVTENGNLRSFFTASMKCISMLSKLQKDDVFEIELRTKKVGDILTSYHIVKKL*
Ga0065179_1239157	Ga0065179_12391571	F096624	MVQTVRTVRLVPREKIILFEKPRVLRRVFFSIRQVSGNNNWAPSAISFGDPQLFSHYWINAVSNYFEAKGKDIFQGDVWLRNDAAEFQYYSSTEILH*
Ga0065179_1243219	Ga0065179_12432191	F020302	HQVHCNVTPEDFTKAKALKLPWNRLLSRGINSADVLRDLRTKDVEIYNLKRYLERLAARLQFYINKKNELLQENCKLRCVILDKVVYYAKEEEEFCNFLFDYKANHQQLYYEDEASGKDEESQPDK*
Ga0065179_1243415	Ga0065179_12434151	F004515	MVQTVMAKTLLPDQKAILIEKPLTLTRIFFSIRALADQCTWYQSMISFDDPTFATYYVLNGPAKYFEARGEGIFQGNVWAWNRSFANLQYTYTEILV*
Ga0065179_1248697	Ga0065179_12486972	F001258	KYIRKENEVIFCLEEAPEYRISAVAWWSENTRGEIMEQPDIYFRHISSGRLCKSVYACTVGVEYDRYAEEKWDTLYFRIRTMLFRDLRRIVSSKKKYEICPI*
Ga0065179_1254738	Ga0065179_12547381	F000320	MFPTKGGKAEVLYREILWKINRIGQKTYKLKKDVNNICGLVLSKPGATMFVGGHKAELWEAASDDFLQRWKEIGAEKYEVECMIHLMYDLVLQEEIKRKGKIILNIKRRAVSMAK*
Ga0065179_1257784	Ga0065179_12577841	F069685	MSEENKGKAQEDVEALKAKITELQAENEKLKTAVAEATQTLTAYVEREKEAVIKQILEKANLSEDELKKLDLPQIKLMQKTVDSVKGTVKNIRSACVGNTSEGGLTVGDLYHKE*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300004107: Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/8/14 3 um filter (version 2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences