NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Sample 3300005690

3300005690: Enhanced biological phosphorus removal bioreactor viral communities from the University of Queensland, Australia - SBR4-V93108 Phage Sequencing



Overview

Basic Information
IMG/M Taxon OID3300005690 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0111422 | Gp0115874 | Ga0074439
Sample NameEnhanced biological phosphorus removal bioreactor viral communities from the University of Queensland, Australia - SBR4-V93108 Phage Sequencing
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of Queensland
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size17316013
Sequencing Scaffolds1
Novel Protein Genes1
Associated Families1

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameEnhanced Biological Phosphorus Removal Bioreactor Microbial Communities From The University Of Queensland, Australia
TypeEngineered
TaxonomyEngineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Lab-Scale Ebpr Bioreactor → Enhanced Biological Phosphorus Removal Bioreactor Microbial Communities From The University Of Queensland, Australia

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationSt. Lucia, Queensland Australia
CoordinatesLat. (o)-27.49999Long. (o)153.012098Alt. (m)N/ADepth (m)N/A
Location on Map
Zoom:    Powered by OpenStreetMap ©


Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F100051Metagenome / Metatranscriptome103Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0074439_103107All Organisms → cellular organisms → Bacteria1232Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0074439_103107Ga0074439_1031071F100051MLERLICAVFGHRYVVERVLNHGARKVGCTRCGKHWGMHDVTRSFVPWDGELEALYAPGGILAQASGDVPPNAKVS

 ⦗Top⦘



© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.