NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300006078

3300006078: Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid C



Overview

Basic Information
IMG/M Taxon OID3300006078 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0116794 | Gp0121522 | Ga0081595
Sample NameMicrobial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid C
Sequencing StatusPermanent Draft
Sequencing CenterMax Planck Institute for Plant Breeding Research
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size352320966
Sequencing Scaffolds32
Novel Protein Genes57
Associated Families29

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota1
All Organisms → cellular organisms → Bacteria5
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1
Not Available7
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota4
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis1
All Organisms → Viruses → Predicted Viral3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium2
All Organisms → cellular organisms → Archaea1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Tamkungvirus → Tamkungvirus ST41
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMicrobial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids → Microbial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine hydrothermal vent biomemarine hydrothermal venthydrothermal fluid
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationManus Basin, Bismarck Sea
CoordinatesLat. (o)-3.728333Long. (o)151.672394Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F005684Metagenome / Metatranscriptome393Y
F006552Metagenome370Y
F008525Metagenome / Metatranscriptome332Y
F009293Metagenome / Metatranscriptome320Y
F021319Metagenome219N
F026397Metagenome198N
F026538Metagenome197Y
F029561Metagenome / Metatranscriptome188Y
F031644Metagenome / Metatranscriptome182N
F032810Metagenome179N
F033867Metagenome176Y
F037941Metagenome / Metatranscriptome167Y
F047906Metagenome / Metatranscriptome149N
F054946Metagenome / Metatranscriptome139Y
F059475Metagenome134Y
F063768Metagenome / Metatranscriptome129N
F064193Metagenome129Y
F066848Metagenome / Metatranscriptome126N
F069480Metagenome124N
F071317Metagenome / Metatranscriptome122N
F076171Metagenome118N
F077773Metagenome / Metatranscriptome117Y
F078841Metagenome / Metatranscriptome116N
F092215Metagenome / Metatranscriptome107N
F094002Metagenome106Y
F095628Metagenome105Y
F101330Metagenome / Metatranscriptome102N
F105335Metagenome / Metatranscriptome100N
F105866Metagenome / Metatranscriptome100Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0081595_1000233All Organisms → cellular organisms → Archaea → Euryarchaeota18271Open in IMG/M
Ga0081595_1000558All Organisms → cellular organisms → Bacteria11882Open in IMG/M
Ga0081595_1000801All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus10126Open in IMG/M
Ga0081595_1001860All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae6834Open in IMG/M
Ga0081595_1002026Not Available6555Open in IMG/M
Ga0081595_1003964All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4831Open in IMG/M
Ga0081595_1005625All Organisms → cellular organisms → Bacteria4103Open in IMG/M
Ga0081595_1005938All Organisms → cellular organisms → Bacteria4006Open in IMG/M
Ga0081595_1011759All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus2900Open in IMG/M
Ga0081595_1016919All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota2441Open in IMG/M
Ga0081595_1018161All Organisms → cellular organisms → Bacteria2359Open in IMG/M
Ga0081595_1019952All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis2252Open in IMG/M
Ga0081595_1021478Not Available2177Open in IMG/M
Ga0081595_1022965All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota2107Open in IMG/M
Ga0081595_1024483All Organisms → Viruses → Predicted Viral2043Open in IMG/M
Ga0081595_1026000All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1987Open in IMG/M
Ga0081595_1030528Not Available1843Open in IMG/M
Ga0081595_1035177All Organisms → cellular organisms → Bacteria1725Open in IMG/M
Ga0081595_1038324All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota1660Open in IMG/M
Ga0081595_1042150All Organisms → Viruses → Predicted Viral1588Open in IMG/M
Ga0081595_1042621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium1580Open in IMG/M
Ga0081595_1072311Not Available1231Open in IMG/M
Ga0081595_1080533All Organisms → Viruses → Predicted Viral1168Open in IMG/M
Ga0081595_1150842All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium849Open in IMG/M
Ga0081595_1170231Not Available792Open in IMG/M
Ga0081595_1231738Not Available647Open in IMG/M
Ga0081595_1243791All Organisms → cellular organisms → Archaea622Open in IMG/M
Ga0081595_1247913All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Tamkungvirus → Tamkungvirus ST4614Open in IMG/M
Ga0081595_1259024All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium592Open in IMG/M
Ga0081595_1260750Not Available589Open in IMG/M
Ga0081595_1289456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia538Open in IMG/M
Ga0081595_1297585All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote525Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0081595_1000233Ga0081595_10002332F005684VYDTEESPLSLMQVVRRKSEVREGRLCNRNEPRQAHCEPERGRFPDRGWNEHPHRSKSKQVCMASTGPGRMHS*
Ga0081595_1000558Ga0081595_100055816F009293FSYSESLGDSDELYAAFESGLPVVIKNAKIPNLDYDYYDNLSEWVTPENKWVMPWYNSHIKNRDRLVNERGWNDNEIDTFHQHHKQSQAGWNTFFDTLFPKYNTSERMLSHRYNTLVQNKLHLDELDSEHTGNEQQMRMFVQLDKKRPRVLAFGPTVADLYNTYFDEFNLYELDIYDAHSFITDIRDRCIWNSKQMDQFHLPLNYVTLDPGDIWFFNAQWISHQIVFGTKLQCFETDIYKDSLIDPTMCLGDRIKNL*
Ga0081595_1000801Ga0081595_10008013F021319MECIINPEKDANIKINCEVGAARFIDIPSATTINGTKIRPPPIPNRLDIIPAKKLAPAEKTSKRLDTSAGFSPSFLLRNMYDAEEMRISANKILKMSGDKSEDTNAPSIVPGTAIKPSFHPSESSIRFCLAYIAVDATELLNTANKLLLTANVGENPANVNTGTMIIPPPRPIIDPNIPATNPSGINQSSSSMIKSRLILV*
Ga0081595_1001860Ga0081595_10018606F008525METFKESFNLLIEKKLALPKGETVAKELTKLGKKKKITAVITSKFNLYIDGDRLDKFKSVKEAEKALKEFIKAMDL*
Ga0081595_1001936Ga0081595_100193611F059475MNNPENMATQGTQDEEKQNKDTTQYVFDTTITKQKQIT*
Ga0081595_1002026Ga0081595_10020262F105866MAGTTEIPYVRKDDTFKEWRERTNIMIQQQNNFVRMQEFEMLGVSDSYVTTSMQLNYSGETENTN*
Ga0081595_1003964Ga0081595_10039647F047906VQEERRLFRLRGIAIVALAAKFTQKRTVTKERTPDAIRVPVAHRPVVGLGVLAVRWHHAVTKVRAALRLNMLVVAKRVSRVEIKFAVTAKAGLVQTQRL
Ga0081595_1005625Ga0081595_10056258F101330SNQSSLMWLQNNYTVSLCGFIGVCIGYFTGHQEICIMIGVGIGILIRFVQSKSK*
Ga0081595_1005938Ga0081595_10059382F071317LKKITAVGLITLFAGVTAAPLIHLDECNMPCCAGLATSCCDMDQEVACPTISDCGSSIFVLIVSGPFHKSELKSSDSISQRFVTDLDIFKIETNYIACFGNYDPGPMAFLNLPLLI*
Ga0081595_1007220Ga0081595_10072205F059475VKLTTNATPDEEKQNKNTTQYVLDTTMRKQTQIT*
Ga0081595_1010439Ga0081595_10104396F059475MDNPETLAKQVTQDEEKQNKNTTQYMLITTVCKQTQIT*
Ga0081595_1011759Ga0081595_10117596F006552NQYPTVWEATPKVEIPLLISPVLKIKSSRINPVANIPKPIPIARKAIDILNNVGLPVFLNPIYEIVPITRPTKSPTKFRIISRKNSNYADSATVLNKVSEQVF*
Ga0081595_1014894Ga0081595_10148945F059475MDNPEKLATSGTQAEDKQNKNTTQYMLDSTIRKQTQIT*
Ga0081595_1016919Ga0081595_10169192F021319VGAARFIEIPSATTINGTKIKPPPTPKRLDIIPAKKLAPAEKTSNIRDVSKGFRSIFLFRKMYDADAKRTSANKILKISGDRSEDMNAPSTVPGTAINPSFQPRESSMRFCLAYTAVDATELLNTANKLLLTASVGENPTNVNTGTIIIPPPRPIIEPNRPATNPSGMSQILSINVLG*
Ga0081595_1018161Ga0081595_10181613F105335VLSDHSAGVESLAFAPNSGQLASGSRDGRVRLHTIGGRLLRTFQGVGEPPDATGFGQAPRVLCLDWSEAGLIGGTSTGYVFRLPNGQGDWQPLHREKASPVYALGQASGQIVAGKTGQLLKLPKP*
Ga0081595_1019952Ga0081595_10199521F054946LAFLYNSDYERWVPHPPQNFAVGFSLAPQLLQDKAVGIVSAGFRVGL*
Ga0081595_1021478Ga0081595_10214783F092215MSQTPNDIALAETFHHSEDISGVRQGPGLIQLTEAHYAPFVDDDYCPLAGPALLVPKAIRLADLALGMEVGQLGIGKATQRCAPSTVGRNCVAAYAQDLSIIILEPLVFLPERGRLRGSTRGEVEYVERKNNYLLALVVGQGNVPIGGGKFEIGG*
Ga0081595_1022965Ga0081595_10229653F095628MVYMYSIHLTFCIRNARAALVMKYGIEPFYDLQASSYAYK
Ga0081595_1023644Ga0081595_10236444F059475MDNPEKLATLYAQDKDNQHTKNTTRYVLDTILRKHTQIT*
Ga0081595_1024483Ga0081595_10244839F037941MRCRACNKQLNDNESVYKNKETGEYLDMCNGCRRASFLTTDLLDVDEDKTYVENYFKNNKHSS*
Ga0081595_1026000Ga0081595_10260001F069480MRLVPNHIELIDRIYILESRNNIKRVEGNAGQILDEAPKNKPYNTVKTVFFSVFKPEFFSENIQVF
Ga0081595_1030528Ga0081595_10305283F064193MSQTRPADLARLSIESSIATEINFDSVIRNFAGTKAN*
Ga0081595_1035177Ga0081595_10351772F076171NAFPDLNLSWLLIGEGEMILGRVNDAEKTILENYRKLPDEGKIGFEVRTNLYEREYLEHKELMGNIVDVAMNNENKLPFMSWELYNCLQVLQNSRVNKIISIQKKPSKMAVFDTSELKSQLKSQLENNEGDIQKLISLDAEYIKEFFTNTNE*
Ga0081595_1037216Ga0081595_10372162F059475MDNPEKLATYGTKDEEKQNNNTTQYLLDTTIWKQT*
Ga0081595_1038324Ga0081595_10383242F094002MLEVRIFYASGALECPLPRSPNTTTAIAINTPIAAPNADAAASAIADLLKVNNI*
Ga0081595_1041643Ga0081595_10416434F059475LQFLNPEKLATYGTQDEDKKNKYTTQYVLDTIIRKQTQIT*
Ga0081595_1042150Ga0081595_10421503F029561FAHTSILSRGQLQMIEDDPAKMETLARLMGAVNLDNLFRHMQNPSVNPATRLEFQKMLNKMGKLEPDGKDVVGAGGPQVIINITRAKDREEEAITIEGATV*
Ga0081595_1042621Ga0081595_10426211F063768MDTDAVPDPLTTAEGVAEFVVLTELSTALSERLGGWSTDGADPDSSAAMASLAARLGEHSAWWTERIPESVLLEGERAAASGSGRLAEVLGLLDVAASDRRAAVVSVLDRLVAYLGALAERLSPLGDAPARRTI
Ga0081595_1046534Ga0081595_10465342F059475MNNQEKLATSGTQDEEKQSKNTTQYVLDTTIRKQT*
Ga0081595_1047632Ga0081595_10476322F059475MANSEKLLTQGTQDEEKQNKNTTQYVLDITMRKQTQIT*
Ga0081595_1051923Ga0081595_10519231F059475MDNPEELATEGTQDEEKQSKNTTQYVLDASIRKQTQMT*
Ga0081595_1054680Ga0081595_10546804F059475MDNPEILATYGTQNKDEEKQSKNTTRYVLDTIIRKQTQIT*
Ga0081595_1072311Ga0081595_10723111F026397AFLRFFSSFRCKKCETFKLLFLTSLFFIIGCDDITFHRKPIISVTVSSDCHDLYKDDNLYIYISRFGTDWDSDMYVDVGSTEDLAVFVEGKYNITATAARKNLTGSNYESIKSIFVYHGEERNVEFHCD*
Ga0081595_1078363Ga0081595_10783631F033867RVIADYIAGEDKMIAEGKMPTVNHLYAFLDRMAETFHDAHKDVMKRIGIKELIKDEFLYLEKKDDDS*
Ga0081595_1080533Ga0081595_10805332F026538MYKLTKHEDVYGIKRLSDNAGIPQADGNRDYQQFLQDVKEQGISIVE
Ga0081595_1081242Ga0081595_10812424F059475MDNPAKLTTYGTQDEEKQNKNTTQYVLDTTIRKQTQIT*
Ga0081595_1084330Ga0081595_10843301F059475MDN*EKLATEGTQDEEKQNKNTTQYVLDTTKRKQAQIV*
Ga0081595_1087322Ga0081595_10873221F059475GNPEKLATQGTQDEEKQNKNTTQYVLDTIIRKQTQITQIRHEPS*
Ga0081595_1117175Ga0081595_11171752F059475MDNQEKLAAQGTQDEEKQIKNLTQYVLDTTTRKQTQINN
Ga0081595_1150842Ga0081595_11508422F101330MWLQNNYTVSFCGFIGVCIGYFTGHQEICIMIGVGIGIL
Ga0081595_1168988Ga0081595_11689881F059475MDNPETLATQGTQDEEKQNKNTTQYVLDTTGSKQTQIT*
Ga0081595_1170231Ga0081595_11702312F095628MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKMWI*
Ga0081595_1178210Ga0081595_11782102F059475EKLSTKGTKDEDKQYKNTTQYVLDTIMYKPTQIT*
Ga0081595_1178576Ga0081595_11785761F059475MDNPEKLETYGTQDEEKQNKNTAQYVVDTTRRKQT
Ga0081595_1193979Ga0081595_11939791F059475MPKGQSQMDNPEKLTTQVTQDKEKQNKNKTQYVLDTTIHKQTQIT*
Ga0081595_1200380Ga0081595_12003802F059475LDNPEKLTTYGTQDKEKQNKNITQYILDTTICKQTQ
Ga0081595_1231738Ga0081595_12317381F026538MYKLLKYKDSYGITRLSDNASIPQAEGNRDYQQFLQDVKKEGIS
Ga0081595_1241788Ga0081595_12417881F059475MDNPEKLATLGTQDREEDKQNKNRNQYVLDTTMSKQTLIT*
Ga0081595_1243791Ga0081595_12437911F078841ESRSDKAKRAISEYLDEYGQVRATELKKEVCDERGICSEKIFYRCLSELVKSKRIIKNEQNRGNVSYYKPDWGVYENMINIDVIKQGTSTVRILAEVGRHENEVMQLTLLKMAFDNIMGMYASMTLITQQPGKAKTSAIITSTLKNTIPELLEMFSIALEKCGKNRSRILSSLMDYRDGNMGGGWVLENHPDFKK*
Ga0081595_1247913Ga0081595_12479131F026538MYKLTQHEGSYGVTRLSDNASIPQAEGNRDYQQFLQDVKEQGISIVEGSD
Ga0081595_1250771Ga0081595_12507711F059475MDNPEKLETQGTQDEEKQNKNTTQYVLDTTIRKQIQI
Ga0081595_1259024Ga0081595_12590241F077773MFASFFLQKSPENYETETNITKFKSKRKMFIKQQLGLELYSPVTPKL
Ga0081595_1260750Ga0081595_12607501F032810MTDDKRKKIELCFDSVEKLVTLKAALSRAVANINNNLETAIERLEDRQFILEGDPFADGDLNDGLMRLDSIDIEYVQRLYTDSLWETMQILLPHYRTTKE*
Ga0081595_1268523Ga0081595_12685232F031644MKEDKKVSWEDIAWSNMYSIEALMNILEDKGLITKQEVLGELQKLKVEHQKEMN*
Ga0081595_1289456Ga0081595_12894562F066848MRFSTRSIHSLRHPQDEVYRAVSREVGPGFAMGSSDPVLRTVLKGARQIAADQRLPVDPVAQSADPELDLVA*
Ga0081595_1297585Ga0081595_12975851F006552NQYPTVWEATPNVEIPLLISPVLKIKSSRINPAANIPKPIPIAKKAIDNLNNVGLAVFLNPIYEIVPITRPTKSPIRLRIISRKNSNYADSVTVLNKV*
Ga0081595_1303805Ga0081595_13038052F059475MYNPEKLATYGTQDENAQNKNTTQYVLDANICKQNTNNVNK

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