Basic Information | |
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IMG/M Taxon OID | 3300006078 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0116794 | Gp0121522 | Ga0081595 |
Sample Name | Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid C |
Sequencing Status | Permanent Draft |
Sequencing Center | Max Planck Institute for Plant Breeding Research |
Published? | N |
Use Policy | Open |
Dataset Contents | |
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Total Genome Size | 352320966 |
Sequencing Scaffolds | 32 |
Novel Protein Genes | 57 |
Associated Families | 29 |
Dataset Phylogeny | |
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Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Archaea → Euryarchaeota | 1 |
All Organisms → cellular organisms → Bacteria | 5 |
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus | 2 |
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 1 |
Not Available | 7 |
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1 |
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota | 4 |
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis | 1 |
All Organisms → Viruses → Predicted Viral | 3 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium | 1 |
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium | 2 |
All Organisms → cellular organisms → Archaea | 1 |
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Tamkungvirus → Tamkungvirus ST4 | 1 |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia | 1 |
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote | 1 |
Ecosystem Assignment (GOLD) | |
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Name | Microbial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea |
Type | Environmental |
Taxonomy | Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids → Microbial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea |
Alternative Ecosystem Assignments | |
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Environment Ontology (ENVO) | marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) |
Location Information | ||||||||
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Location | Manus Basin, Bismarck Sea | |||||||
Coordinates | Lat. (o) | -3.728333 | Long. (o) | 151.672394 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F005684 | Metagenome / Metatranscriptome | 393 | Y |
F006552 | Metagenome | 370 | Y |
F008525 | Metagenome / Metatranscriptome | 332 | Y |
F009293 | Metagenome / Metatranscriptome | 320 | Y |
F021319 | Metagenome | 219 | N |
F026397 | Metagenome | 198 | N |
F026538 | Metagenome | 197 | Y |
F029561 | Metagenome / Metatranscriptome | 188 | Y |
F031644 | Metagenome / Metatranscriptome | 182 | N |
F032810 | Metagenome | 179 | N |
F033867 | Metagenome | 176 | Y |
F037941 | Metagenome / Metatranscriptome | 167 | Y |
F047906 | Metagenome / Metatranscriptome | 149 | N |
F054946 | Metagenome / Metatranscriptome | 139 | Y |
F059475 | Metagenome | 134 | Y |
F063768 | Metagenome / Metatranscriptome | 129 | N |
F064193 | Metagenome | 129 | Y |
F066848 | Metagenome / Metatranscriptome | 126 | N |
F069480 | Metagenome | 124 | N |
F071317 | Metagenome / Metatranscriptome | 122 | N |
F076171 | Metagenome | 118 | N |
F077773 | Metagenome / Metatranscriptome | 117 | Y |
F078841 | Metagenome / Metatranscriptome | 116 | N |
F092215 | Metagenome / Metatranscriptome | 107 | N |
F094002 | Metagenome | 106 | Y |
F095628 | Metagenome | 105 | Y |
F101330 | Metagenome / Metatranscriptome | 102 | N |
F105335 | Metagenome / Metatranscriptome | 100 | N |
F105866 | Metagenome / Metatranscriptome | 100 | Y |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
Ga0081595_1000233 | All Organisms → cellular organisms → Archaea → Euryarchaeota | 18271 | Open in IMG/M |
Ga0081595_1000558 | All Organisms → cellular organisms → Bacteria | 11882 | Open in IMG/M |
Ga0081595_1000801 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus | 10126 | Open in IMG/M |
Ga0081595_1001860 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | 6834 | Open in IMG/M |
Ga0081595_1002026 | Not Available | 6555 | Open in IMG/M |
Ga0081595_1003964 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 4831 | Open in IMG/M |
Ga0081595_1005625 | All Organisms → cellular organisms → Bacteria | 4103 | Open in IMG/M |
Ga0081595_1005938 | All Organisms → cellular organisms → Bacteria | 4006 | Open in IMG/M |
Ga0081595_1011759 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus | 2900 | Open in IMG/M |
Ga0081595_1016919 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota | 2441 | Open in IMG/M |
Ga0081595_1018161 | All Organisms → cellular organisms → Bacteria | 2359 | Open in IMG/M |
Ga0081595_1019952 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosotenuis | 2252 | Open in IMG/M |
Ga0081595_1021478 | Not Available | 2177 | Open in IMG/M |
Ga0081595_1022965 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota | 2107 | Open in IMG/M |
Ga0081595_1024483 | All Organisms → Viruses → Predicted Viral | 2043 | Open in IMG/M |
Ga0081595_1026000 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota | 1987 | Open in IMG/M |
Ga0081595_1030528 | Not Available | 1843 | Open in IMG/M |
Ga0081595_1035177 | All Organisms → cellular organisms → Bacteria | 1725 | Open in IMG/M |
Ga0081595_1038324 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota | 1660 | Open in IMG/M |
Ga0081595_1042150 | All Organisms → Viruses → Predicted Viral | 1588 | Open in IMG/M |
Ga0081595_1042621 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium | 1580 | Open in IMG/M |
Ga0081595_1072311 | Not Available | 1231 | Open in IMG/M |
Ga0081595_1080533 | All Organisms → Viruses → Predicted Viral | 1168 | Open in IMG/M |
Ga0081595_1150842 | All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium | 849 | Open in IMG/M |
Ga0081595_1170231 | Not Available | 792 | Open in IMG/M |
Ga0081595_1231738 | Not Available | 647 | Open in IMG/M |
Ga0081595_1243791 | All Organisms → cellular organisms → Archaea | 622 | Open in IMG/M |
Ga0081595_1247913 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Tamkungvirus → Tamkungvirus ST4 | 614 | Open in IMG/M |
Ga0081595_1259024 | All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium | 592 | Open in IMG/M |
Ga0081595_1260750 | Not Available | 589 | Open in IMG/M |
Ga0081595_1289456 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia | 538 | Open in IMG/M |
Ga0081595_1297585 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote | 525 | Open in IMG/M |
Scaffold ID | Protein ID | Family | Sequence |
---|---|---|---|
Ga0081595_1000233 | Ga0081595_10002332 | F005684 | VYDTEESPLSLMQVVRRKSEVREGRLCNRNEPRQAHCEPERGRFPDRGWNEHPHRSKSKQVCMASTGPGRMHS* |
Ga0081595_1000558 | Ga0081595_100055816 | F009293 | FSYSESLGDSDELYAAFESGLPVVIKNAKIPNLDYDYYDNLSEWVTPENKWVMPWYNSHIKNRDRLVNERGWNDNEIDTFHQHHKQSQAGWNTFFDTLFPKYNTSERMLSHRYNTLVQNKLHLDELDSEHTGNEQQMRMFVQLDKKRPRVLAFGPTVADLYNTYFDEFNLYELDIYDAHSFITDIRDRCIWNSKQMDQFHLPLNYVTLDPGDIWFFNAQWISHQIVFGTKLQCFETDIYKDSLIDPTMCLGDRIKNL* |
Ga0081595_1000801 | Ga0081595_10008013 | F021319 | MECIINPEKDANIKINCEVGAARFIDIPSATTINGTKIRPPPIPNRLDIIPAKKLAPAEKTSKRLDTSAGFSPSFLLRNMYDAEEMRISANKILKMSGDKSEDTNAPSIVPGTAIKPSFHPSESSIRFCLAYIAVDATELLNTANKLLLTANVGENPANVNTGTMIIPPPRPIIDPNIPATNPSGINQSSSSMIKSRLILV* |
Ga0081595_1001860 | Ga0081595_10018606 | F008525 | METFKESFNLLIEKKLALPKGETVAKELTKLGKKKKITAVITSKFNLYIDGDRLDKFKSVKEAEKALKEFIKAMDL* |
Ga0081595_1001936 | Ga0081595_100193611 | F059475 | MNNPENMATQGTQDEEKQNKDTTQYVFDTTITKQKQIT* |
Ga0081595_1002026 | Ga0081595_10020262 | F105866 | MAGTTEIPYVRKDDTFKEWRERTNIMIQQQNNFVRMQEFEMLGVSDSYVTTSMQLNYSGETENTN* |
Ga0081595_1003964 | Ga0081595_10039647 | F047906 | VQEERRLFRLRGIAIVALAAKFTQKRTVTKERTPDAIRVPVAHRPVVGLGVLAVRWHHAVTKVRAALRLNMLVVAKRVSRVEIKFAVTAKAGLVQTQRL |
Ga0081595_1005625 | Ga0081595_10056258 | F101330 | SNQSSLMWLQNNYTVSLCGFIGVCIGYFTGHQEICIMIGVGIGILIRFVQSKSK* |
Ga0081595_1005938 | Ga0081595_10059382 | F071317 | LKKITAVGLITLFAGVTAAPLIHLDECNMPCCAGLATSCCDMDQEVACPTISDCGSSIFVLIVSGPFHKSELKSSDSISQRFVTDLDIFKIETNYIACFGNYDPGPMAFLNLPLLI* |
Ga0081595_1007220 | Ga0081595_10072205 | F059475 | VKLTTNATPDEEKQNKNTTQYVLDTTMRKQTQIT* |
Ga0081595_1010439 | Ga0081595_10104396 | F059475 | MDNPETLAKQVTQDEEKQNKNTTQYMLITTVCKQTQIT* |
Ga0081595_1011759 | Ga0081595_10117596 | F006552 | NQYPTVWEATPKVEIPLLISPVLKIKSSRINPVANIPKPIPIARKAIDILNNVGLPVFLNPIYEIVPITRPTKSPTKFRIISRKNSNYADSATVLNKVSEQVF* |
Ga0081595_1014894 | Ga0081595_10148945 | F059475 | MDNPEKLATSGTQAEDKQNKNTTQYMLDSTIRKQTQIT* |
Ga0081595_1016919 | Ga0081595_10169192 | F021319 | VGAARFIEIPSATTINGTKIKPPPTPKRLDIIPAKKLAPAEKTSNIRDVSKGFRSIFLFRKMYDADAKRTSANKILKISGDRSEDMNAPSTVPGTAINPSFQPRESSMRFCLAYTAVDATELLNTANKLLLTASVGENPTNVNTGTIIIPPPRPIIEPNRPATNPSGMSQILSINVLG* |
Ga0081595_1018161 | Ga0081595_10181613 | F105335 | VLSDHSAGVESLAFAPNSGQLASGSRDGRVRLHTIGGRLLRTFQGVGEPPDATGFGQAPRVLCLDWSEAGLIGGTSTGYVFRLPNGQGDWQPLHREKASPVYALGQASGQIVAGKTGQLLKLPKP* |
Ga0081595_1019952 | Ga0081595_10199521 | F054946 | LAFLYNSDYERWVPHPPQNFAVGFSLAPQLLQDKAVGIVSAGFRVGL* |
Ga0081595_1021478 | Ga0081595_10214783 | F092215 | MSQTPNDIALAETFHHSEDISGVRQGPGLIQLTEAHYAPFVDDDYCPLAGPALLVPKAIRLADLALGMEVGQLGIGKATQRCAPSTVGRNCVAAYAQDLSIIILEPLVFLPERGRLRGSTRGEVEYVERKNNYLLALVVGQGNVPIGGGKFEIGG* |
Ga0081595_1022965 | Ga0081595_10229653 | F095628 | MVYMYSIHLTFCIRNARAALVMKYGIEPFYDLQASSYAYK |
Ga0081595_1023644 | Ga0081595_10236444 | F059475 | MDNPEKLATLYAQDKDNQHTKNTTRYVLDTILRKHTQIT* |
Ga0081595_1024483 | Ga0081595_10244839 | F037941 | MRCRACNKQLNDNESVYKNKETGEYLDMCNGCRRASFLTTDLLDVDEDKTYVENYFKNNKHSS* |
Ga0081595_1026000 | Ga0081595_10260001 | F069480 | MRLVPNHIELIDRIYILESRNNIKRVEGNAGQILDEAPKNKPYNTVKTVFFSVFKPEFFSENIQVF |
Ga0081595_1030528 | Ga0081595_10305283 | F064193 | MSQTRPADLARLSIESSIATEINFDSVIRNFAGTKAN* |
Ga0081595_1035177 | Ga0081595_10351772 | F076171 | NAFPDLNLSWLLIGEGEMILGRVNDAEKTILENYRKLPDEGKIGFEVRTNLYEREYLEHKELMGNIVDVAMNNENKLPFMSWELYNCLQVLQNSRVNKIISIQKKPSKMAVFDTSELKSQLKSQLENNEGDIQKLISLDAEYIKEFFTNTNE* |
Ga0081595_1037216 | Ga0081595_10372162 | F059475 | MDNPEKLATYGTKDEEKQNNNTTQYLLDTTIWKQT* |
Ga0081595_1038324 | Ga0081595_10383242 | F094002 | MLEVRIFYASGALECPLPRSPNTTTAIAINTPIAAPNADAAASAIADLLKVNNI* |
Ga0081595_1041643 | Ga0081595_10416434 | F059475 | LQFLNPEKLATYGTQDEDKKNKYTTQYVLDTIIRKQTQIT* |
Ga0081595_1042150 | Ga0081595_10421503 | F029561 | FAHTSILSRGQLQMIEDDPAKMETLARLMGAVNLDNLFRHMQNPSVNPATRLEFQKMLNKMGKLEPDGKDVVGAGGPQVIINITRAKDREEEAITIEGATV* |
Ga0081595_1042621 | Ga0081595_10426211 | F063768 | MDTDAVPDPLTTAEGVAEFVVLTELSTALSERLGGWSTDGADPDSSAAMASLAARLGEHSAWWTERIPESVLLEGERAAASGSGRLAEVLGLLDVAASDRRAAVVSVLDRLVAYLGALAERLSPLGDAPARRTI |
Ga0081595_1046534 | Ga0081595_10465342 | F059475 | MNNQEKLATSGTQDEEKQSKNTTQYVLDTTIRKQT* |
Ga0081595_1047632 | Ga0081595_10476322 | F059475 | MANSEKLLTQGTQDEEKQNKNTTQYVLDITMRKQTQIT* |
Ga0081595_1051923 | Ga0081595_10519231 | F059475 | MDNPEELATEGTQDEEKQSKNTTQYVLDASIRKQTQMT* |
Ga0081595_1054680 | Ga0081595_10546804 | F059475 | MDNPEILATYGTQNKDEEKQSKNTTRYVLDTIIRKQTQIT* |
Ga0081595_1072311 | Ga0081595_10723111 | F026397 | AFLRFFSSFRCKKCETFKLLFLTSLFFIIGCDDITFHRKPIISVTVSSDCHDLYKDDNLYIYISRFGTDWDSDMYVDVGSTEDLAVFVEGKYNITATAARKNLTGSNYESIKSIFVYHGEERNVEFHCD* |
Ga0081595_1078363 | Ga0081595_10783631 | F033867 | RVIADYIAGEDKMIAEGKMPTVNHLYAFLDRMAETFHDAHKDVMKRIGIKELIKDEFLYLEKKDDDS* |
Ga0081595_1080533 | Ga0081595_10805332 | F026538 | MYKLTKHEDVYGIKRLSDNAGIPQADGNRDYQQFLQDVKEQGISIVE |
Ga0081595_1081242 | Ga0081595_10812424 | F059475 | MDNPAKLTTYGTQDEEKQNKNTTQYVLDTTIRKQTQIT* |
Ga0081595_1084330 | Ga0081595_10843301 | F059475 | MDN*EKLATEGTQDEEKQNKNTTQYVLDTTKRKQAQIV* |
Ga0081595_1087322 | Ga0081595_10873221 | F059475 | GNPEKLATQGTQDEEKQNKNTTQYVLDTIIRKQTQITQIRHEPS* |
Ga0081595_1117175 | Ga0081595_11171752 | F059475 | MDNQEKLAAQGTQDEEKQIKNLTQYVLDTTTRKQTQINN |
Ga0081595_1150842 | Ga0081595_11508422 | F101330 | MWLQNNYTVSFCGFIGVCIGYFTGHQEICIMIGVGIGIL |
Ga0081595_1168988 | Ga0081595_11689881 | F059475 | MDNPETLATQGTQDEEKQNKNTTQYVLDTTGSKQTQIT* |
Ga0081595_1170231 | Ga0081595_11702312 | F095628 | MVYMYSINLNFCIRNARAALVMKYGIGPFYDLQASSYAYKMWI* |
Ga0081595_1178210 | Ga0081595_11782102 | F059475 | EKLSTKGTKDEDKQYKNTTQYVLDTIMYKPTQIT* |
Ga0081595_1178576 | Ga0081595_11785761 | F059475 | MDNPEKLETYGTQDEEKQNKNTAQYVVDTTRRKQT |
Ga0081595_1193979 | Ga0081595_11939791 | F059475 | MPKGQSQMDNPEKLTTQVTQDKEKQNKNKTQYVLDTTIHKQTQIT* |
Ga0081595_1200380 | Ga0081595_12003802 | F059475 | LDNPEKLTTYGTQDKEKQNKNITQYILDTTICKQTQ |
Ga0081595_1231738 | Ga0081595_12317381 | F026538 | MYKLLKYKDSYGITRLSDNASIPQAEGNRDYQQFLQDVKKEGIS |
Ga0081595_1241788 | Ga0081595_12417881 | F059475 | MDNPEKLATLGTQDREEDKQNKNRNQYVLDTTMSKQTLIT* |
Ga0081595_1243791 | Ga0081595_12437911 | F078841 | ESRSDKAKRAISEYLDEYGQVRATELKKEVCDERGICSEKIFYRCLSELVKSKRIIKNEQNRGNVSYYKPDWGVYENMINIDVIKQGTSTVRILAEVGRHENEVMQLTLLKMAFDNIMGMYASMTLITQQPGKAKTSAIITSTLKNTIPELLEMFSIALEKCGKNRSRILSSLMDYRDGNMGGGWVLENHPDFKK* |
Ga0081595_1247913 | Ga0081595_12479131 | F026538 | MYKLTQHEGSYGVTRLSDNASIPQAEGNRDYQQFLQDVKEQGISIVEGSD |
Ga0081595_1250771 | Ga0081595_12507711 | F059475 | MDNPEKLETQGTQDEEKQNKNTTQYVLDTTIRKQIQI |
Ga0081595_1259024 | Ga0081595_12590241 | F077773 | MFASFFLQKSPENYETETNITKFKSKRKMFIKQQLGLELYSPVTPKL |
Ga0081595_1260750 | Ga0081595_12607501 | F032810 | MTDDKRKKIELCFDSVEKLVTLKAALSRAVANINNNLETAIERLEDRQFILEGDPFADGDLNDGLMRLDSIDIEYVQRLYTDSLWETMQILLPHYRTTKE* |
Ga0081595_1268523 | Ga0081595_12685232 | F031644 | MKEDKKVSWEDIAWSNMYSIEALMNILEDKGLITKQEVLGELQKLKVEHQKEMN* |
Ga0081595_1289456 | Ga0081595_12894562 | F066848 | MRFSTRSIHSLRHPQDEVYRAVSREVGPGFAMGSSDPVLRTVLKGARQIAADQRLPVDPVAQSADPELDLVA* |
Ga0081595_1297585 | Ga0081595_12975851 | F006552 | NQYPTVWEATPNVEIPLLISPVLKIKSSRINPAANIPKPIPIAKKAIDNLNNVGLAVFLNPIYEIVPITRPTKSPIRLRIISRKNSNYADSVTVLNKV* |
Ga0081595_1303805 | Ga0081595_13038052 | F059475 | MYNPEKLATYGTQDENAQNKNTTQYVLDANICKQNTNNVNK |
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