Sample 3300007164

3300007164: Iron oxide microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_top_diel_T=3 metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007164 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0067861 \| Gp0123754 \| Ga0099836
Sample Name	Iron oxide microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_top_diel_T=3 metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	34692653
Sequencing Scaffolds	49
Novel Protein Genes	50
Associated Families	28

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon ECH_B_SAG-G16	1
Not Available	32
All Organisms → Viruses → Predicted Viral	8
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	2
All Organisms → Viruses	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 1 → Candidatus Marsarchaeota G1 archaeon OSP_D	1
All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	3
All Organisms → cellular organisms → Archaea → TACK group	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → microbial mat material
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Yellowstone National Park, Wyoming, USA
Coordinates	Lat. (^o)	44.7315	Long. (^o)	-110.7113	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F006070	Metagenome / Metatranscriptome	382	N
F008949	Metagenome / Metatranscriptome	325	Y
F011233	Metagenome / Metatranscriptome	293	N
F018963	Metagenome / Metatranscriptome	232	N
F021133	Metagenome / Metatranscriptome	220	N
F021808	Metagenome / Metatranscriptome	217	Y
F022017	Metagenome / Metatranscriptome	216	N
F023140	Metagenome / Metatranscriptome	211	Y
F026924	Metagenome / Metatranscriptome	196	Y
F027904	Metagenome / Metatranscriptome	193	N
F033507	Metagenome / Metatranscriptome	177	Y
F033508	Metagenome / Metatranscriptome	177	Y
F040183	Metagenome / Metatranscriptome	162	N
F041867	Metagenome / Metatranscriptome	159	Y
F042427	Metagenome / Metatranscriptome	158	Y
F066922	Metagenome / Metatranscriptome	126	Y
F071411	Metagenome / Metatranscriptome	122	Y
F072527	Metagenome / Metatranscriptome	121	N
F075083	Metagenome / Metatranscriptome	119	N
F083455	Metagenome / Metatranscriptome	113	Y
F084460	Metagenome / Metatranscriptome	112	N
F085906	Metagenome / Metatranscriptome	111	N
F090626	Metagenome / Metatranscriptome	108	Y
F090627	Metagenome / Metatranscriptome	108	N
F092367	Metagenome / Metatranscriptome	107	Y
F094113	Metagenome / Metatranscriptome	106	N
F097669	Metagenome / Metatranscriptome	104	Y
F099550	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0099836_100129	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon ECH_B_SAG-G16	902	Open in IMG/M
Ga0099836_100243	Not Available	695	Open in IMG/M
Ga0099836_100600	Not Available	731	Open in IMG/M
Ga0099836_100850	Not Available	712	Open in IMG/M
Ga0099836_101214	Not Available	612	Open in IMG/M
Ga0099836_102906	Not Available	1051	Open in IMG/M
Ga0099836_104186	All Organisms → Viruses → Predicted Viral	3078	Open in IMG/M
Ga0099836_106556	Not Available	572	Open in IMG/M
Ga0099836_106891	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	2006	Open in IMG/M
Ga0099836_109908	Not Available	500	Open in IMG/M
Ga0099836_110515	Not Available	655	Open in IMG/M
Ga0099836_112108	All Organisms → Viruses	1206	Open in IMG/M
Ga0099836_112121	Not Available	595	Open in IMG/M
Ga0099836_112743	All Organisms → Viruses → Predicted Viral	2727	Open in IMG/M
Ga0099836_113993	All Organisms → Viruses → Predicted Viral	1380	Open in IMG/M
Ga0099836_114311	Not Available	716	Open in IMG/M
Ga0099836_116721	All Organisms → Viruses → Predicted Viral	2069	Open in IMG/M
Ga0099836_122300	Not Available	502	Open in IMG/M
Ga0099836_123346	Not Available	527	Open in IMG/M
Ga0099836_123900	Not Available	758	Open in IMG/M
Ga0099836_126362	Not Available	804	Open in IMG/M
Ga0099836_126482	Not Available	981	Open in IMG/M
Ga0099836_126876	Not Available	619	Open in IMG/M
Ga0099836_127462	Not Available	559	Open in IMG/M
Ga0099836_127631	Not Available	1041	Open in IMG/M
Ga0099836_131021	Not Available	635	Open in IMG/M
Ga0099836_131060	All Organisms → Viruses → Predicted Viral	3039	Open in IMG/M
Ga0099836_132153	Not Available	573	Open in IMG/M
Ga0099836_134223	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	645	Open in IMG/M
Ga0099836_134340	Not Available	800	Open in IMG/M
Ga0099836_134632	Not Available	826	Open in IMG/M
Ga0099836_134918	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 1 → Candidatus Marsarchaeota G1 archaeon OSP_D	775	Open in IMG/M
Ga0099836_135633	All Organisms → Viruses → Predicted Viral	2368	Open in IMG/M
Ga0099836_136408	All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	693	Open in IMG/M
Ga0099836_149502	Not Available	685	Open in IMG/M
Ga0099836_149565	Not Available	586	Open in IMG/M
Ga0099836_153090	Not Available	616	Open in IMG/M
Ga0099836_156583	All Organisms → cellular organisms → Archaea → TACK group	1938	Open in IMG/M
Ga0099836_157840	Not Available	522	Open in IMG/M
Ga0099836_157917	Not Available	578	Open in IMG/M
Ga0099836_158152	All Organisms → Viruses → Predicted Viral	2234	Open in IMG/M
Ga0099836_158715	All Organisms → Viruses → Predicted Viral	1286	Open in IMG/M
Ga0099836_159386	Not Available	584	Open in IMG/M
Ga0099836_159389	All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	832	Open in IMG/M
Ga0099836_160198	All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	846	Open in IMG/M
Ga0099836_161835	Not Available	4062	Open in IMG/M
Ga0099836_162203	Not Available	2493	Open in IMG/M
Ga0099836_162787	Not Available	731	Open in IMG/M
Ga0099836_163820	Not Available	1810	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099836_100129	Ga0099836_1001293	F026924	MSVSKVCWRQHYKFEASKIVHLGRHGFHIPVIVYGHDPDPEKAQEDLCINMVGIYEPIGSFRENQLILPPKKGVRVEQEG*
Ga0099836_100243	Ga0099836_1002431	F042427	TTKIETQNLSDSGGATKAVPLPLAFPECECICHVGGEPYSCGAMCWHPQSDSSEYIVQLATSTNNVDHSVSLFAVYSAGKLKRIIFESSNGLLKQFEVN*
Ga0099836_100600	Ga0099836_1006001	F006070	MTLYRYLVVDLPIRDTNTHTYRTDPFDPLIPTQPGISLVRLGESVPPVRAFNIYVYNYANADLNVQVIANENAKNYQYGAFLDGLDYQSESSYPDFNVGSPVTVASGSLQQPGVQTVQADFYSTSAERYISLALTYSTAPTTGFVRAHINLFYEGF*
Ga0099836_100850	Ga0099836_1008501	F094113	QVFASRIKHEITDKNVLAILESLYQLYTRCHISRNYSDVVEKSIDEMNENKISMQNLLLCFVRKTFTFPIMREWKKKSEFLLIRDEFLPANYDYNNWQKHIEFEEYIEYKLLSTPASKIIVPPETKTVMLTQREKEFIIKLKKEFNYETIDDAILHILQKSAGWKLISFITRLLNENVTLKEIDDNLGGLGDFIFIIAEQKNDEDEIKIVAQFYPLVHTIDFGKIIEVSKK*
Ga0099836_101214	Ga0099836_1012141	F094113	ESLYQLYTRCHISRNYSDVVEKSIDEMKNENEISIQNLLLCFVRKANTFTFPAMQEWKKESEFLLIRDEFLPANYDYNNWQKHIEFEEYIEYKLLSTPASKIISPPETKTVMLKQEDKEFIMKLKKEFNYETIDDAILHVLKNSTGWKLISLITRLLNEDITLKEIDENFGVFGDFIFIFAEQKNDEDEIKIVAQFYPLVHVID
Ga0099836_102906	Ga0099836_1029063	F042427	KIETQNLSDSGGATKAVPLPLAPRECECPCHVGGESHSCGGMCWHPWLDTDNYTVELAISTNNVDHYARLYAIYSFGKLKFLVFESSNGLLKRFEVN*
Ga0099836_104186	Ga0099836_1041861	F022017	NVQVIANENAKNYEYGNLLDGLNYFTEESYPDFNIGSAVAVPAGSLSTPSVEAIQSDFYKDAAERYISVALTYSTAPTSGFVRAHIDLFYEGF*
Ga0099836_106556	Ga0099836_1065562	F097669	APNYTYRCTACTYTNEYKETTIRHYYANHVSDNIKNQVFTVQKVALKDYGITVTLVVCSICKWSTDGRNSASVASHFYHSHVNPAVRNVTNPLVKQILERLKTLSEEELKQVLDYVNAFQ
Ga0099836_106891	Ga0099836_1068913	F026924	LSVSKVCWRQHYKFEASKIVHLGRHGFHIPVTVYGHDPDPEKAQEDLCINMVGFYEPIGSFRENQLILPPKKGERV*
Ga0099836_109908	Ga0099836_1099081	F006070	MTLYRYLVVDLPIRDTNTHTYRTDPFDPLIPTQPGISLVRLGESVPPVRAFNIYVYNFANAALNVQMIANENAKNYEYGNLLDGLNYFTEESYPDFDVGSAVAVPAGSLSTPSVEAIQSDFYKDAAERYISVALTYSATPTSGF
Ga0099836_110515	Ga0099836_1105151	F027904	MEKYEPPEYDLFNLNNGGTAIGTTPASLLYEGQANAAVIVPPDLTLRVKQVIIQNATTSLITVQLLAVTTVSGAPTPVAKTPPIPVPASSAVTLDEDEWSISVKSGYSLAAVSSAANSANVFVKAYFVKGTGSPI*
Ga0099836_112108	Ga0099836_1121081	F075083	QKLIDSLRELDIDFEKGEDTIRIKGLAGYVCCGNVVIYQIPDKKIVFEELGDANRIILNSTDETKPGIKQILLDKSVYARYDFPYLIVQF*
Ga0099836_112121	Ga0099836_1121211	F006070	RTDPFDPLIPTQPGISLVRLGESVPPVRAFNIYVYNYANAALNVQLIANENAKNYQYGYLLDGLDYQSESSYPDFNIGSAVAVPAGSLSTPSVEPIQSDFYKDAAERYISVALTYSTAPTSGFVRAHIDLFYEGF*
Ga0099836_112743	Ga0099836_1127432	F006070	MTLYPYLVVDLPITDTNTHTYRTNPFNPLAPTQPGISLVRLGESVPPVRAFNIYVYNYANADLNVQVIANENAKNYQYGAFLDGLDYQSESSYPDFNVGSPVTVASGSLQPGVQTIQADFYSTSAERYISLALTYSTAPTTGFVRAHIVLFYEGF*
Ga0099836_113993	Ga0099836_1139931	F040183	VKLKYPFPQRFHYLTVLGKYLTPNTTIVASGANTGPLTANTVCDFVQTPNHKELAVNLTIQAVSGTFSTGQGLTAYFDVLDPVEPQNINVNSSERPPVLELKLNSTAITTAPTTIRFVIANGVATVWINGASTVLGNVNVPYIWQVRFAISGTTPSFSIVGTYEARE*
Ga0099836_114311	Ga0099836_1143112	F011233	KGWRYHVPELQRQLLSGIPVSFSGNFTVLNGEFPGYFVSAAVGTTDPNFITRASADGLTVIEVTVGDLRDARVYRNQMGEPNILSYGAYIRDFPLPVYALSLNGDGLPFYQSIKIEIIPRNQPAFITGFAANIIEIYDVNLFKESVKEFFESITPSTVPPVVPTPPRFVANEVVSTKLPIKVT*
Ga0099836_116721	Ga0099836_1167213	F085906	MSESLILDNLTSFLENFRGEFQSQVRQIGDGIYEEIGTLTVYLPGENGGRVMGEYNVHAVIYDVVQVIRLDGRYYDMSDDRWHTVSLLLLFKYNELLDETFLQVGNGTMIYGQRVRRPYW
Ga0099836_122300	Ga0099836_1223001	F090626	MSRIVKFENIYFGKNSLVKLFANKTHLETSTDYDGTALAFLLDISDFTNTDTLLSHFAIINGNEIRPILVEWNLRTIHGRLLILLNQLSGPHDTKMLLKRFESTIENQRPETIKNISGQYAKALADAKGLKQIYNFLVQRIQQLKSIGIKKSEEE
Ga0099836_123346	Ga0099836_1233461	F090626	MSRIVKFENIYFGKNSLVKLFANKTHLENSTDYDGTALAFLLDISDFTNTDTLLSHFAIINGNEIRPILVEWNLRTIHGRLLLLLNLLPGPHDTKMLLKRFESTIENQRPETIKYIAGQYAKALADAKGLKQIYNFLVQRIQQLKSIGIKKSEEE
Ga0099836_123900	Ga0099836_1239002	F027904	MEKYEPPEYDLFNLNNGSTAIGTTPASLLYEGQANAAVIVPPDLTLRVKQVVIQNATTSLITVQLLAVSTVSGAPTPVAKTPPIPVPASSAVTLDEDEWSISVKTGYSLAAVSSAANSANVFVKAYFVKGTGSP
Ga0099836_126362	Ga0099836_1263621	F094113	DKNVLAILESLYELYTRCLISRNYSDVVEKSIEEMKNENKISIQNLLLCFVRKVNTFTFPAMREWKKESEFLLIRDEFLPANYDYNNWQKHIEFEEYIEYKLLSTPASKIISPPETKTVMLIQEDKEFIMKLKKEFNYNTIDDAILHVLKNSTGWKMISLITRLLNEDITLKEIDENLGVFGDFIFIFAEQKNDEDEIKIVAQFYPLVHVIDFGKIIEVSKK*
Ga0099836_126482	Ga0099836_1264821	F071411	LYRMKNMADIRTELEKHIDNIAEQLIAQQLEDNLQDVIDDAIDAQLYIDLSTKEPVGFDIGIAIGGPNIRLIYSRGACQLRGWWGSLNDIKDIDNEICETILDYLTEIYRQ*
Ga0099836_126876	Ga0099836_1268762	F006070	MTLYRYLVVDLPIRDTNTHTYRTDPFDPLIPTQPGISLVRLGESVPPVRAFNIYVYNFANAALNVQMIANENAKNYEYGNLLDGLNYFTEESYPDFNVGSAVTVPAGSLSAPSVEAIQSDFYMNASERYISVALTYSA
Ga0099836_127462	Ga0099836_1274621	F011233	LSGIPVSFSSEYTILNGQFPGYFVSAAIGTTDPNFITRASADGLTVIEVTVGDLRDARVYRNQMGEPNILSYGAYIRDFPLPVYALSLNGDGLPFYQSIKIEIIPRNQPAFITGFAANIIEIYDVNLFKESVKEFFESITPSTVPPVVPTPPRFVANEVVSTKLLI*
Ga0099836_127631	Ga0099836_1276313	F066922	KIQKFASDRTIRRYVARLEKLELSKVSAEQAIRVVAIFLSTPLGQWLLTVVLLELLAKAKFFSEIEVDILIGAVTSMELITALAKSGIITQIAGLAGLF*
Ga0099836_131021	Ga0099836_1310212	F090626	MSRIVKFENIYFGKNSLVKLFANKIHLETSTDYDGTALAFLLDISDFTNTDTLLSHFAIIDGNEIRPILVEWNLQTVHDRLFILLGRLPGPHDTKMLLKRFEVIVKENNNPSLVKNIAGQYAKALADAKGLGQIYNFLVQRIQQLKAIGIRKSLEEVRRLATVYG*
Ga0099836_131060	Ga0099836_1310601	F011233	WLDYNWRVLAVAVPWFLPFVKGWRYHVPKLQRELLSGLPVPFTSEYTIINGQFPGYFVSAAVGTTDPNFITRASADGLTVIEVTVGELRDARVYRNQMGEPNILSYGSYIRGFPLPVYALSLSGDGLPFYQSIKIEVVPRNQPALITGFAANIIEIYDVNLFKESVKEFFESITPSPSTVPTSPGFVAEEVVSAKLPVRVT*
Ga0099836_132153	Ga0099836_1321532	F027904	GQSPVTLLYEGQPNAAVYAPPDLTLRAKQIIIQNATTSPITVQLLAVAAPNTSLPGPIPKTPPIPVNAGSAVTLSEEEWGIAVRSGYGLAAVSSAANSANVFVKCYFTKGTGMPV*
Ga0099836_134223	Ga0099836_1342232	F040183	MKLKYPFPQRFHYLTVLGKYLTPNTTIVASGANTGPLTANTVCDFVQTPNHKELAVNLTIQAVSGTFSTGQGLTAYFDVLDPVEPQNVNVNSSERPPVLELKLNSTAITTSPTTIRLVIANGVATVWINGASTVLGNVNVPYIWQVRFAITGTSPSFSIVGTYEARE*
Ga0099836_134340	Ga0099836_1343402	F071411	NLSTTLRTELQKHIDNIAQELKDNLQDVIENAIDATLYISVQSREPIGFDIGIVIGGPNIRLIYNRGACQLQGWWGSLNEIKDVDNEICEEILQYLSE*
Ga0099836_134632	Ga0099836_1346323	F092367	MSENKVSINITQRFEKIDATVAKILRMLNHDLELGLEDDVVVALKLLLYLLHILEQKAVTKEEKETVRQVKAQIV
Ga0099836_134918	Ga0099836_1349183	F092367	MSENNVSINITQRFEKIDATVAKILRMLNHDLELGLEDDVVVALKLLLYLLHILEQKAVTKEEKETVRQVKAQIV
Ga0099836_135633	Ga0099836_1356332	F040183	MKLKYPFPQRFHYLTVLGKYLTPNTTIVASGANTGPLTANTVCDYVQTPNHKELAVNLTIQAVSGTFSTGQGLTAYFDVLDPVEPQNVNVNSSERPPVLELKLNSTAITTAPTTIRLIIANGVATVWINNASTALGNVNVPYIWQVRFAITGTSPSFSIVGTYEARE*
Ga0099836_136408	Ga0099836_1364081	F090626	MSRIVKFENIYFGKNSLVKLFANKTHLENSNDYDAIALAFLLDVSDFTNNNALLSHFAIINGNEIRPILVEWNLRTIHGRLLILLNQLSGPHDTKMLLKEFESTIENQKPETIKNISGQYAKALADAKGLNQIYNFLVQRIQQLKSIGIKRNEEEVRRLAEVYR*
Ga0099836_149502	Ga0099836_1495021	F041867	VVDMNAFDRDDRNGALKASIMIERDLKKLLNEASEGEKEGIKVAIARVREMKESIETLHGNSVMKALREIELESS*
Ga0099836_149565	Ga0099836_1495652	F072527	ELLQQAVLAFGAERVQVLQKIRQYIAQTDCTVLNVQLQQITNINMLRMLQAAGVPQCMQTTFYLQVNKALKGVKP*
Ga0099836_153090	Ga0099836_1530901	F021133	LIRQIYENGNHAIKKICEMEPDDKMANFSATDCIIGTANTHLALKIAKEKGYPQDVIEYLENQSRQEQWHCQLQIGKPPKPYDFVVAQKHREILLKHGIYVWMGVMPLLGEKIALAKAICWRRNDDPHFVNKFATVDEYYHTTYPLLLLSKYASEEELEKIIELQKEYITNIFKLK*
Ga0099836_156583	Ga0099836_1565833	F099550	MYRLTEEIKRLLATKHKTMQIVWVPLSLLEKVAQIAEKLHLPINQTIIVLVFYALREERTQQSNNGTLRFTCPICLQEFNDANDLLMHLKGDEDIAVKPHI*
Ga0099836_157840	Ga0099836_1578401	F083455	MDLFSYQLGISSLWAKDFIVALLGIALAVSLTLANKKGESLLIQSTMMMPVAFAIHALPHINYISLNTIFDYGIIATGISLVLDYITTKAERPGLKYRFINMYILLTLYAIIKYPSDVLEFALNSVLITIVFALITYIPPVDDIL*
Ga0099836_157917	Ga0099836_1579173	F084460	IDEIVNKAIAKYLVKQAGPEEINVKFTKNWILVFLPNGYLKISRKFNEGSYKLKILQYKEKK*
Ga0099836_158152	Ga0099836_1581521	F033508	LYALNCVTVNPPGYKFQGKGFLWGLSDLFGAEHLPNAAEDEDINITLNAAATRIDAYYAEIQPQDVSSHTVPGGSDAKVKPFIEVLDTLVTTTGNGINVLNENMPTGLGLLDNNGRVKATTQFTLLTMFADYISTGTNFTEYSRLHIFDEDEELFTPLNHEGLFIDYTVTLGDLYMNWPQQLYFKPDQPYVFKPNHQVSVTADVPAVTGTGSKLRVGLIGVRERLG*
Ga0099836_158715	Ga0099836_1587151	F033507	VGVATSTTSTEGTLTVSLSVTCPSSATGCNVNQIDGVYYLYGVLDGYYYCGLQMGNQSVQYDWTLNVSATPTSLASGATVFVEVTYFDTLPNKPYYTETYPFTLNSNGQDSGEFSVCMVPSTIFPESSVGVKVVGVKSATDQSIPYTSSGITIIPQ*
Ga0099836_158715	Ga0099836_1587153	F018963	MFPYVRGEDGSVTDTLIMSFRTKRVVYSKLSVNKFGHGYRTYVLLPANYVMYEAYRTGRGRASIKVSVIDVSPNPLSHFRVKDIWVMYEGVSPVTLVEDLPWNIRGIIEGNSG
Ga0099836_159386	Ga0099836_1593862	F023140	LHRRILLSNVFIGLATVPVYILLKPFPFLAVFGVGVLTTLTVLILFFYFLGAKFVGIWAVLQKFAVTLPTSLVLTRLVEDVPRNPYLDYVVLFLVGYTVSTPLIFLTYHVTRWLYVKKGRLNTPNLRER*
Ga0099836_159389	Ga0099836_1593892	F021808	MILKKKIMMNEEPPYGTMAWFFYEIDERQRQIYELVFDIDQKLAKVKDLLNEIDLLKAQLETNVNVGKI*
Ga0099836_160198	Ga0099836_1601982	F021808	LVIYIKIMMNEEPPYGTMAWYFYEIDERQRQIYELVFDIDQKLAKVKDLLNEIDILKAQLETNVNVGKI*
Ga0099836_161835	Ga0099836_1618356	F033508	VTVSNPGQKHAGKGFLWGLSDLFGAENLPNAAEDEDINITLNAAATRIDAYYAEIQPQDVSSHSVNGGSDAKVKPFIEILDTLVNSAGTSINVLNENMPTGLGLLDISGRVKATTQFTLLTMFADYVSSGTNFTEYSRLHIFDEDEELFTPLNHEGLFIDYTVTQGDLYMNFPARLYFKPDQPYIFKPNHQISVKADVAAVTGTGSTLRVALIGIRERLG*
Ga0099836_162203	Ga0099836_1622031	F066922	NVPLETELERLKQTMTEKVQKFASDRTIRRYIARLEKLELGKVSAEQALRILAVFLSTPLGQWLAVVVVLELLAKAKFFSQISVDVLIAVITSAELVSALAKAGIIPEIAGLAGLF*
Ga0099836_162787	Ga0099836_1627871	F008949	MGGWNMSSQTVTLGTQTITSKVEDLGDSYYIEFQVKVSRYLNNPVNQTIDVKFMCSKYKQVVTLQSPLTPTVQTVQKTIQECVEEWYNQHKSVYEVV*
Ga0099836_163820	Ga0099836_1638202	F090627	MNLPGKLAIGIDGYIRVMLNGKVIYDDTNAITTQFLQYLQNMLQGTVPTVNSIYVLAKPNGTQINLNNLTFQNNYQQVNMIFLNQYVPQPIEALELWISTSVGNYPVAVLQFQNAITQSGELAVQWSILIQVPLIVQGAEAFGISDSIPQILMQLFIPQQYFSTPIQLTSTQPTLQIVSTPQVTPTFIAPSEAGVGAVAYITTSSTISTLSALLYILGQYIMTVSQNNLNEQAVNSLIIASAFITLTSSNITSVVP*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007164: Iron oxide microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_top_diel_T=3 metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences