Sample 3300007166

3300007166: Iron oxide microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_top_diel_T=1 metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007166 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0067861 \| Gp0123753 \| Ga0099835
Sample Name	Iron oxide microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_top_diel_T=1 metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	38597480
Sequencing Scaffolds	48
Novel Protein Genes	55
Associated Families	38

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	5
Not Available	31
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	6
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon	1
All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	2
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon OSP_D	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → microbial mat material
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: Yellowstone National Park, Wyoming
Coordinates	Lat. (^o)	44.7315	Long. (^o)	-110.7113	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F006070	Metagenome / Metatranscriptome	382	N
F008949	Metagenome / Metatranscriptome	325	Y
F011097	Metagenome / Metatranscriptome	295	Y
F011233	Metagenome / Metatranscriptome	293	N
F018963	Metagenome / Metatranscriptome	232	N
F020733	Metagenome / Metatranscriptome	222	Y
F021808	Metagenome / Metatranscriptome	217	Y
F022017	Metagenome / Metatranscriptome	216	N
F023140	Metagenome / Metatranscriptome	211	Y
F026606	Metagenome / Metatranscriptome	197	Y
F027904	Metagenome / Metatranscriptome	193	N
F030159	Metagenome / Metatranscriptome	186	Y
F033508	Metagenome / Metatranscriptome	177	Y
F040183	Metagenome / Metatranscriptome	162	N
F042426	Metagenome / Metatranscriptome	158	N
F045199	Metagenome / Metatranscriptome	153	Y
F045200	Metagenome / Metatranscriptome	153	Y
F047176	Metagenome / Metatranscriptome	150	N
F048414	Metagenome / Metatranscriptome	148	Y
F050482	Metagenome / Metatranscriptome	145	Y
F053392	Metagenome / Metatranscriptome	141	N
F061049	Metagenome / Metatranscriptome	132	Y
F067921	Metagenome / Metatranscriptome	125	N
F069055	Metagenome / Metatranscriptome	124	Y
F071411	Metagenome / Metatranscriptome	122	Y
F072527	Metagenome / Metatranscriptome	121	N
F073767	Metagenome / Metatranscriptome	120	N
F075083	Metagenome / Metatranscriptome	119	N
F077500	Metagenome / Metatranscriptome	117	Y
F080244	Metagenome / Metatranscriptome	115	N
F084460	Metagenome / Metatranscriptome	112	N
F090626	Metagenome / Metatranscriptome	108	Y
F092367	Metagenome / Metatranscriptome	107	Y
F094113	Metagenome / Metatranscriptome	106	N
F097669	Metagenome / Metatranscriptome	104	Y
F097670	Metagenome / Metatranscriptome	104	Y
F099550	Metagenome / Metatranscriptome	103	Y
F101506	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0099835_100144	All Organisms → Viruses → Predicted Viral	1721	Open in IMG/M
Ga0099835_100320	Not Available	564	Open in IMG/M
Ga0099835_100361	Not Available	639	Open in IMG/M
Ga0099835_100456	All Organisms → Viruses → Predicted Viral	2146	Open in IMG/M
Ga0099835_102519	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	850	Open in IMG/M
Ga0099835_103839	Not Available	1568	Open in IMG/M
Ga0099835_103987	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	969	Open in IMG/M
Ga0099835_104210	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	1135	Open in IMG/M
Ga0099835_105985	Not Available	703	Open in IMG/M
Ga0099835_106692	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae → unclassified Desulfurococcaceae → Desulfurococcaceae archaeon	3398	Open in IMG/M
Ga0099835_108370	Not Available	755	Open in IMG/M
Ga0099835_111730	All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	823	Open in IMG/M
Ga0099835_113870	Not Available	520	Open in IMG/M
Ga0099835_113909	Not Available	753	Open in IMG/M
Ga0099835_117267	Not Available	617	Open in IMG/M
Ga0099835_126153	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
Ga0099835_126797	Not Available	1103	Open in IMG/M
Ga0099835_129988	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	545	Open in IMG/M
Ga0099835_130909	All Organisms → Viruses → Predicted Viral	1260	Open in IMG/M
Ga0099835_131980	Not Available	858	Open in IMG/M
Ga0099835_132343	All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	1167	Open in IMG/M
Ga0099835_134336	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	569	Open in IMG/M
Ga0099835_134813	Not Available	717	Open in IMG/M
Ga0099835_137025	Not Available	1035	Open in IMG/M
Ga0099835_137394	All Organisms → Viruses → Predicted Viral	1969	Open in IMG/M
Ga0099835_150761	Not Available	618	Open in IMG/M
Ga0099835_158704	Not Available	661	Open in IMG/M
Ga0099835_159375	Not Available	593	Open in IMG/M
Ga0099835_164001	Not Available	522	Open in IMG/M
Ga0099835_164631	Not Available	1551	Open in IMG/M
Ga0099835_165754	Not Available	678	Open in IMG/M
Ga0099835_165798	Not Available	713	Open in IMG/M
Ga0099835_167179	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon OSP_D	532	Open in IMG/M
Ga0099835_167777	Not Available	654	Open in IMG/M
Ga0099835_168154	Not Available	1109	Open in IMG/M
Ga0099835_168683	Not Available	812	Open in IMG/M
Ga0099835_170171	Not Available	689	Open in IMG/M
Ga0099835_171897	Not Available	632	Open in IMG/M
Ga0099835_171941	Not Available	719	Open in IMG/M
Ga0099835_172074	Not Available	863	Open in IMG/M
Ga0099835_172152	Not Available	615	Open in IMG/M
Ga0099835_172367	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	600	Open in IMG/M
Ga0099835_172787	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	790	Open in IMG/M
Ga0099835_173698	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Marsarchaeota → Candidatus Marsarchaeota group 2 → Candidatus Marsarchaeota G2 archaeon BE_D	697	Open in IMG/M
Ga0099835_173958	Not Available	551	Open in IMG/M
Ga0099835_174275	Not Available	517	Open in IMG/M
Ga0099835_174458	Not Available	530	Open in IMG/M
Ga0099835_174545	Not Available	529	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0099835_100144	Ga0099835_1001441	F045200	QGYITEEIGKVTPNQPEVVTLLSPIRDAQYLKLLQNPTTTAPDAGLGVIDNPFFFVAGHYPGGLSPTGAPEDRTYLVWFGSPAGTTNEKPLFSVFYARVHPERYVPNAPAETWLDPPVLLVSYDQISSDVVNWADNVFTSAGYTPSSPGVISVPGNTGYIPNYGYVGYPNSPSPITFNFTGTPELKQLHMIYDMLDDTVLMYFSITVPNWNPATKAQYVYKFPVSLLKSQQSINQYAVSGLTPTTTSAPPPNDKPYFLGGLKFDSTVEQTIGNALSDAWLNTLQMQSAPQFAISFDWYKLGGFMGYTPSHGFLPAIYIGNSLYMSFYNYPHGDSLMAIAFADIHKNPAQPQTYYQPIITNYGYNFIAFGEERLPENLESCPSSYGSYSYYCIPILGFAGQLDGFDPGLNIDKFGSIVPGESFGIHGTYIIPITLPPRPDYGGISSIRMKMLYLAPIFHQFQGYGGLSFAWTRDSVEIPYYPEMGTCRPYLTTLPDGKLKVTMGGYHADNYIDGIAIYMDKSDISPKGKTLVTVPPLIFGQTSAGGNYYVIAGANGANYIYQGVVAHTFGKKYA
Ga0099835_100320	Ga0099835_1003201	F061049	MSIFIIKFEKDNLILKEWVSEGKEDLEKALIEMLDIDF
Ga0099835_100320	Ga0099835_1003202	F042426	MEGNVKRLMDLPLKSIYTVGQGETKSGFEVYYLFEYKSGNFSEKADNVYMIYATTILGEWITENFDKLKKAIFELEIEFRDSQYNKKVPVPVKVRKIADKPKIPVSVEEEGF*
Ga0099835_100361	Ga0099835_1003612	F048414	MYSGKLKENASTSLFYSFLLFVISFAIVIAGLNYIWGRPALIWLPLSVWNLLITLGIFLSIMIILIIVVRRFI*
Ga0099835_100456	Ga0099835_1004562	F008949	MSSQTVKLGTQTITPKVQDSGNSYYIEFQVNITKYLNNPVNQTIDITFTCNKYKQVVVPSNPLSPPTVQTVQKTIQECIDEWFDQHKSVYEVA*
Ga0099835_102519	Ga0099835_1025191	F040183	VLGKYLTPNTTIVASGANTGPLTANTVCDFVQTPNHKELAVNLTIQAVSGTFSTGQGLTAYFDVLDPVEPQNVNVNSSERPPVLELKLNSTAITIAPTTIRLIIVNGVATVWINNASTVLGNVNVPYIWQVRFAITGTSPSFSIVGTYEARE*
Ga0099835_103839	Ga0099835_1038391	F094113	STRIKHEIKDKTTLAILESLYQLYTRCHISRNYSDVVEKSIEEMKNENKISIQNLLLCFVRKVNTFTFPAMREWKKESEFLLIRDEFLPANYDYNNWQKHIEFEEYIEYKLLSTPASKIISPPETKTVMLIQEDKEFIMKLKKEFNYETIDDAILHVLKNSTGWKLISLITRLLNEDITLKEIDENFGVFGDFIFIFAEQKNDEDEIKIVAQFYPLVHVIDFGKIIEVSKK*
Ga0099835_103987	Ga0099835_1039872	F040183	MKLKYPFPQRFHYLTVLGKYLTPNTTIVASGANTGPLTANTVCDFVQTPNHKELAVNLTIQAVSGTFSTGQGLTAYFDVLDPVEPQNVNVNSSERPPVLELKLNSTAITTAPTTIRLVIVNGVVTVWINGASANLGYMNVPYIWQVRFAISGTSPSFSIVGTYEARE*
Ga0099835_104210	Ga0099835_1042101	F040183	VKLKYPFPQRFHYLTVLGKYLTPNTTIVASGANTGPLTANTVCDFVQTPNHKELAVNLTIQAVSGTFSTGQGLTAYFDVLDPVEPQNINVNSSERPPVLELKLNSTAITTAPTTIRLVIANGVATVWINGASTVLGNVNVPYIWQVRFAISGTTPSFSIVGTYEARE*
Ga0099835_104210	Ga0099835_1042102	F069055	CYFHPAANVVAFGSDPISFASGVGTIGHCRPQFTTYPDGVPKIIYNDFAFDQSLKTVMEYIDPQVLRPENHKKIYIVEDNFPNPLFFSTFGRKKLFARLYLAFEPTWSPQNDPQYAVVVQISEIDGNYDADAMTAGLGSFLDANDVGTLVLGTQQPTVTLTGGNVGRMFSYKQVEFSAEDLPAYVGILIRAQSTSNVGPFGVIVLE*
Ga0099835_105985	Ga0099835_1059852	F048414	MNFEKLKENASVSPFYSFLLFVLSFIIVIAGLNYIWGKPALVWLPLGLWNLLINLGIFLTIIIVLIVVVRRLI*
Ga0099835_106692	Ga0099835_1066922	F020733	MSEIIWDEEKKEYVRAEDLRERKLIQKIITELINALQNNYTLQIQINLQNGTGTITIVPKQK*
Ga0099835_108370	Ga0099835_1083701	F006070	MTLYRYLVVDLPIRDTNTHTYRTDPFDPLIPTQPGISLIRLGESVPPVRAFNIYVYNFANADLNVQVIANENAKNYAYGNLLDGLNYFTEESYPDFNVGSPKTVASGSLQQPGVQTVQADFYSTSAERYISVALTYSTAPTTGFVRAHINLFYEGF*
Ga0099835_111730	Ga0099835_1117302	F021808	MNEEPPYGTIAWYFFEIDERQRQIYELVFDIDQKLAKVKNLLNEIDILKAQLETNVNVGKI*
Ga0099835_113870	Ga0099835_1138701	F006070	MTLYPYLVVDLPITDTNTHTYRTNPFNPLTPTQPGISLVRLGESVPPVRAFNIYVYNFANADLNVQVIANENAKNYQYGALLDGLDYQSESSYPDFNVGSPVTVASGSLQPGVQTIQADFYSTSAERYISLALTYSTAP
Ga0099835_113909	Ga0099835_1139091	F075083	MDLAEIDLPETECPKQIQKQKLIDSLRELDIDFEKGEDTIRIKGLAGSVCCGHIIVYQIPDRNIVFEELGDANRIILNSTDETKPGIKQILLDKTVYARYDFPYLIVQF*
Ga0099835_114259	Ga0099835_1142592	F069055	WIQAGVLSDIHTNPVNWQGNITLTAAANGGGVDVAGQYNHDKLGSIFVVPQGNTNSACYACLYNATTDRDIRSGSNNLVINAMQVRICYFHPAANVLAFGSDPISFASGVGTIGHCRPQFTTYPDGVPKIIYNDFAFDQSLKTVMEYIDPQVLRPENHKKIYISEDAFPNPIFFSTFGRKKLFARLYFAASGSLVPPTNNPQNDPQYAPVFQIAEYDGNYDYSTGAHYLDNWDVGTLVLGTQEPTTSLSGSIPPSQFSLKQVEFSAEDPPAYVGILMKAQSTNTIAPFGVIVLE*
Ga0099835_117267	Ga0099835_1172671	F027904	WLKMEKYNPPEYDLFNLNNGSTLVGTSPVTLLYEGQPNAAVVVPPDLTLRVKQVIIQNTTSSVITVQLQAVTIQTGLPSPVNKTPPIPVPANSAVTLDEDEWSINVKTGYSLAAVSSTANSANVFVKAYFVKGTGSPI*
Ga0099835_126153	Ga0099835_1261531	F067921	YTGVLALQETFSRIEDRILRNGQYLLVSYSSSQHPDESSYTGFRVTKHNFTTLYYNFATEVSNFLPMAPFGGQASSTTSPPYITNFKFSLQLVQNVTDMFDLSRNYDAYQVFYGIAPSYLRTMLQIQQQFIAVLEQNINPSQSFVEMGIDGFQSPLFAPDPRTEFIVFSNLTYNMTLMNTATIPIMPAFNFVINRMTLEPLSKQEIKKAILAGFPVRTLGAVDSAIPVSRDNYPGLQTVTYKEVYGGGS*
Ga0099835_126153	Ga0099835_1261532	F027904	VECKYDPPTYDLFNLNNGSTLVGQSPVTLLYEGQPNAAVYAPPDLTLRAKQIIIQNATTSPITVQLLAVAAPNTSLPGPIPKTPPIPVNAGSAVTLSEEEWGI
Ga0099835_126797	Ga0099835_1267972	F071411	MTEDDKMLYRMKNMADIRTELEKHIDNIAEQLIAQQLEDNLQDVIDDAIDAQLYIDLSTKEPVGFDIGIAIGGPNIRLIYSRGACQLRGWWGSLNDIKDVDNEICETILDYLTEIYRQ*
Ga0099835_129988	Ga0099835_1299882	F026606	MMTENEYEKIEQKLEEFLGVDARELREKIIEKAVWLDKDYSKMVVLRIYPDGSYDIGIGQEGSYDGLSNDERLWIEFSLIEPWDLSEFETVIANEDGDGYIDQENGDEFKDDNELLDAVFSSVASGFYDEFEY
Ga0099835_130909	Ga0099835_1309092	F073767	MVSKRTEDILTVVGVLGALGIGGYAVYKLVTSITSPITNPASAGCTTPGTPCYSAIQPELNALQGCTNEYMSLLNTYLEEDNKAGTSLTQAQQVNLNYIMNSCIIPLQRQLSKNLQPYNWQANMVTVAKYVVITAGVLIFV
Ga0099835_131980	Ga0099835_1319802	F090626	MSRIVKFENIYFGKNSLVKLFANKTHLETSTDYDGTALAFLLDISDFTNTDTLLSHFAIIDGNEIRPILVEWNLQTVHDRLFILLGRLPGPHDTKMLLKRFEVIVKENNNPSLVKNIAGQYAKALADAKGLGQIYNFLVQRIQQLKAIGIRKSLEEVRRLATVYG*
Ga0099835_132343	Ga0099835_1323432	F090626	MSRIVKFENIYFGKNSLVKLFANKTHLENSNDYDAIALAFLLDVSDFTNNNALLSHFAIINGNEIRPILVEWNLRTIHGRLLILLNQLSGPHNTKMLLKEFESAIENQRPETVKNIAGQYAKALADAKGLQQVYNFLVQRIQQLKSIGIKRKEEEVRRLAEVYR*
Ga0099835_134336	Ga0099835_1343361	F022017	IANENAKNYEYGNLLDGLNYFTEESYPDFNIGSAVTVPAGSLSTPSVDAIQSDFYMNAAERYISVALTYSATPTSGFVRAHIDLFYEGF*
Ga0099835_134813	Ga0099835_1348132	F011233	LAIPWFLPFVKGWRYHVPELQRQLLSGIPVSFSSEYTILNGQFPGYFVSAAIGTTDPNFITRASADGLTVIEVTVGDLRDARVYRNQMGEPNILSYGAYIRDFPLPVYALSLNGDGLPFYQSIKIEIIPRNQPAFITGFAANIIEIYDVNLFKESVKEFFESI
Ga0099835_137025	Ga0099835_1370252	F011233	MAIPWFLPFVKGWRYHVPELQRQLLSGIPVSFNSEYTILNGQFPGYFVSAAIGTTDPNFITRASADGLTVIEVTVGDLRDARVYRNQMGEPNILSYGAYIRDFPLPVYALSLNGDGLPFYQSIKIEIIPRNQPAFITGFAANIIEIYDVNLFKESVKEFFESITPSTVPPVVPTPPRFVANEVVSAKLPVKVT*
Ga0099835_137394	Ga0099835_1373943	F023140	MEGYTVRKTNIRRILLSNVFIGLVTVPVYIVLKSFPFLAVFGVGVLTTLTVLILFFYFLGAKFVGTWAVLQKFAVTLPTSLVLTRLVEDVPRNPYLDYVVLFLVGYTVSTPLIFLTYHVTRWLYVKKGRLNTPNLRER*
Ga0099835_150761	Ga0099835_1507612	F099550	MYLTEEIKKLLATKHKSMQIVWVPLGVLDEIAQIAEKLHLAINQTIIVLAIHALREAQPQQNNGTGHFLCPICLQEFVNGEYFLTHLKGDEDVKIKPHV*
Ga0099835_158704	Ga0099835_1587041	F072527	LQQAVLAFGAERVQVLQKIRQYIAQTDCTVLNVQLQQITNINMLRMLQAAGVPQCMQTTFYLQVNKALKGVKP*
Ga0099835_158704	Ga0099835_1587043	F101506	MSEDVVARTRISAVEQRIQNLEAQINDIRATQLRQLERQNYVLALLAISLI
Ga0099835_159375	Ga0099835_1593753	F045199	MGSLLIKYDISDFIQKWESYMDDLLSQIERDRKKNKNVNELIEIYKKMNFIDSKMLELLDFFGVDENDDL*
Ga0099835_164001	Ga0099835_1640011	F073767	MVSKRTEDILTAVGVVGALGIGGYAVYRLVSSLTTPGCTTPGTACYEATQPERNALQACMNEWTSTLNAYLEEDNQAGTSLTQAQQANLNYIMNSCVIPQEQQLSKNLQPY
Ga0099835_164631	Ga0099835_1646312	F033508	VLYDVFIAGQPQYGYADVSVGTRIFMRIPLYALNCVTVNPPGYKFQGKGFLWGLSDLFGAEHLPNAAEDEDINITLNAAATRIDAYYAEIQPQDVSSHTVPGGSDAKVKPFIEVLDTLVTTTGNGINVLNENMPTGLGLLDNNGRVKATTQFTLLTMFADYISTGTNFTEYSRLHIFDEDEELFTPLNHEGLFIDYTVTLGDLYMNWPQQLYFKPDQPYVFKPNHQVSVTADVPAVTGTGSKLRVGLIGVRERLG*
Ga0099835_165754	Ga0099835_1657541	F097670	MMNYKVFDKDIYTETDEIITMNLKTGETNHETKMYFYDGKELKEIKDLQEYNLKLYEIGQKVQEEFTKFSSKYAKPPIGYIPISNIIYEFMLNRNNIILIAYANISKVENEVSKEISNDSIKIIVKSKTIFNKEWNFES
Ga0099835_165798	Ga0099835_1657982	F077500	MSETQVCHRKHHRWLARRLAYLGLGNYKEVSFEVWTHSTSREEAENDTICRRTRQGFIPVGTFEECLLDPVRRVRRRRERMMSDMWYPSLKKVSENE*
Ga0099835_166824	Ga0099835_1668241	F069055	VAGQQSAVFFYGYGVFDYYTPDHVRWIQAGVLSDIHTNPTNWQGNLTLYAASNGGGVDAGGQYNADKLGSIFVVPQGNTTSACYACLYNATTDRDIRSGSNNVVINAMQIRIAYFHPAANVLAFGSDPISFATGVGTIGHCRPQFTTYPDGIPKIIYNDFAFDQSLKTVMEYIDPQVLRPENHKKIYIVEDNFPFSFFFSTFGRKKLFARIYNTPASNSVPPTDNPQNDPQYAFVLQISEYDGNYDADAFAAGDGTMLTANDVGTLVLGTQQPTVTLSGQGVYSQFLIFKQVEFSAEDL
Ga0099835_167179	Ga0099835_1671792	F092367	MSENNAINVKQHFEKIDATVAKILRMLYRDLELGLEDDLMVALKLLLYLLNIIQRKATTKEEKEVVRQVKEKIVEYVMASE*
Ga0099835_167777	Ga0099835_1677771	F084460	MNNKNMSQINPDDLLQRIDDIVNKAIAKYLLKQAGPEEINVKFTKNWILVFLPNGYLKISRKFNEGSYKLKILQYKENK*
Ga0099835_168154	Ga0099835_1681543	F053392	MPASFNIAASAAAGSVIQGSILAFGPQSPAVAAPQVPITEVWSIVDLYIIGSVTPDALLSIYINGYPQDINPDLNSLNLNNLTRWKLMQALKLPPASTWFTAITLLGANGSSAQTYTVYFSVIRAPYLPSASSK*
Ga0099835_168683	Ga0099835_1686832	F030159	LPPRPDWGGISSIRMKVLYVAPIFHQFQGYGGLSFAWTRDSVEIPYYPEMGTCRPYLTTLPDGKLKATMGGYHADNYIDGIAIYIDKSAISPKGKTLVTVPPIIFGQTSPGGSYYVIAGPNGINLIYHGVVAYTFGKKYARVYANINAYNAAFINIYTRYRSQSAPDLQQMYGNSPNPNNTATYYPVIERNFGTLVHVTDYSYNMPYSLGYPRTSKFRVDGQVLWVIIKQSSSPAFIELEGD*
Ga0099835_170171	Ga0099835_1701712	F018963	MFPYVRGEDGSVTDTLIMSFRTKRVVYSKLSVNKFGHGYRTYVLLPANYVMYEAYRTGRGRASIKVSVIDVSPNPLSHFRVKDIWVMYEGVSPVTLVEDLPWNIRGIIEGNSGELPLYEYLETEVPK*
Ga0099835_171897	Ga0099835_1718972	F092367	MSENNAISVKQHFEKIDATVAKILNMLNHDLELGLEDDLMVALKLLLYLLHVVEQKAVTKEEKETVRQVKAQIV
Ga0099835_171941	Ga0099835_1719411	F011097	PFTNSLFSTGLSTGGSPITGNGSNYQVLSFHPNYARLHIYITGVSGTSPSIQFTVGSPVGANYYTLPPITSPQYVYVVGNENKTIITYLNTSNAVLQQVELPYNIFFNGAYVSWTVSGTSPSISAYIHFEFEDEEEGE*
Ga0099835_171941	Ga0099835_1719412	F008949	MSSQTVTLGTQTITPKVEDLGNTYYIEFQVKITKYLNNSTNQTIDVKFICNKYKQVAVPRTDPLSPPTVQTVQKTIQECVEEWYNQHKSVYEVA*
Ga0099835_172074	Ga0099835_1720741	F080244	LMAELFLGSFLVLMSVFIVTNTSLLQSQNIVQLFVTLNLSMLSIISAIYSKSYPRENKTDEFVKDVTALLFIGFVTTILLIGSLLNTQIIENQYMWGQLFSDVTALIYVVTGVSSTDYSSEKQNKV*
Ga0099835_172152	Ga0099835_1721521	F047176	NPSPFTITAPSGINRRIVEIRPWGTQPFEYQGNYDTELYHDIDSNDINTYHRPHYVALDINGTHQYSIVITNNGTATGTFGVDVVVEESALTGGGAAAPAPAGA*
Ga0099835_172367	Ga0099835_1723671	F050482	MMEQELEKMGFKIIDVKNRFSTHTYHIYAILKNGYALSICQGIGVHGSFVRAPYSNQQTFEVALGRYVGGVFYLIYEGKWKDDVLGWQTPE
Ga0099835_172787	Ga0099835_1727871	F069055	PQGNTNSACYACLYNTTTDRDIRAGSPNLVINAMQIRICYFHPATNVLAFGSDPISFASGVGTIGHCRPQFTTYPDGVPKIIYNDFAFDYSLKIVMEYIDPQVLRPEHHKKIYITEDWFPNPFYFSTFGRKKLFARLYFDVNTANTQNDPQYAPVFQIAEYDGSYDYSNGAGLLDGLDVGTLVLGSQPPSISLTGVAVSFLSFKEVEFSAEDLPAFVGILARAESTNPIGPEGVIVLE*
Ga0099835_173698	Ga0099835_1736981	F069055	QVRICYFHPAANVVAFGSDPISFASGVGTIGHCRPQFTTYPDGVPKLIYSDFAFDQSLKTVMEYIDPQVLRPENHRKIYIVEDDFPNPLFFSTFGRKRLFARFYLSIYPTSYQQNDPQCAVVLQITEIDGNYDADAMTAGLGSFLDANDVGTLVLGMQQPIVTLTGGNVGRAGLYKQVEFSVEDLPAYVGLLLREQITNTIYPFGVIVLE*
Ga0099835_173958	Ga0099835_1739582	F050482	MNHKMMEQELEKMGFKIIDVKNRFPSHTYHIYAVLKNGYALSICQGIGVHSSIGKDPYTQSETFEVALGRYVGGVFYLIYEGKWKDDVLGWQTPENVLELAKSVKRFRSESW*
Ga0099835_174275	Ga0099835_1742751	F020733	MSEIVWDDEEKNYVRAEEIRERKLIQKIISELINALNNNYTLQIQINLQNGTGTITIIPKQQT*
Ga0099835_174458	Ga0099835_1744581	F006070	HTYRTDPFNPLTPTQPGISLVRLGESVPPVRAFNIYVYNYANAALSVQVIANENARNYQYGAFLDGLDYQSESGYPDFNVGSPITVPAGSTSAPSVQAIQSDFYTSAAERYLSLALTYSTAPSAGFVRAHIDLFYGGV*
Ga0099835_174545	Ga0099835_1745452	F097669	MSTVEEELRSLPKIWVEAQGEAPNEKYKCLQCSYVSDYKEQSIRHYYGTHIPDELKDKTFTVEKVNLKDYGITVSLVICNICKWRTDSRNGPSVASHFYHGHVNPAVRNITNPLVRQILERLKILSEDELKQVLDYVNSLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007166: Iron oxide microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_top_diel_T=1 metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences