NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007186

3300007186: Human tongue dorsum microbial communities from NIH, USA - visit 2, subject 246515023



Overview

Basic Information
IMG/M Taxon OID3300007186 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)
Gs0063646 | Gp0052640 | Ga0103259
Sample NameHuman tongue dorsum microbial communities from NIH, USA - visit 2, subject 246515023
Sequencing StatusPermanent Draft
Sequencing CenterBaylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size131731885
Sequencing Scaffolds21
Novel Protein Genes22
Associated Families22

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available4
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA4162
All Organisms → cellular organisms → Bacteria2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → Candidatus Nanosynbacter lyticus2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2
All Organisms → Viruses → Predicted Viral2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Alloprevotella → unclassified Alloprevotella → Alloprevotella sp. OH1205_COT-2841
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae → Haemophilus → Haemophilus haemolyticus1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Alloprevotella1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHuman Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
TypeHost-Associated
TaxonomyHost-Associated → Human → Digestive System → Oral Cavity → Tongue Dorsum → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal surface

Location Information
LocationUSA: Maryland: Natonal Institute of Health
CoordinatesLat. (o)39.0042816Long. (o)-77.1012173Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F032313Metagenome180N
F033081Metagenome178Y
F046432Metagenome151Y
F046433Metagenome151N
F051210Metagenome / Metatranscriptome144Y
F068942Metagenome124N
F072446Metagenome121N
F073671Metagenome120N
F078842Metagenome116N
F080166Metagenome115N
F081455Metagenome114N
F081456Metagenome114N
F085820Metagenome111N
F094007Metagenome106N
F095629Metagenome105N
F095631Metagenome105N
F095633Metagenome105N
F099453Metagenome103N
F103432Metagenome101N
F103433Metagenome101N
F105378Metagenome100N
F105379Metagenome100N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0103259_100001Not Available326144Open in IMG/M
Ga0103259_101111All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA41617279Open in IMG/M
Ga0103259_101226All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctYA41616088Open in IMG/M
Ga0103259_101408All Organisms → cellular organisms → Bacteria14761Open in IMG/M
Ga0103259_101608Not Available13326Open in IMG/M
Ga0103259_102103All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → Candidatus Nanosynbacter lyticus10821Open in IMG/M
Ga0103259_102308All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes9975Open in IMG/M
Ga0103259_105566All Organisms → Viruses → Predicted Viral4402Open in IMG/M
Ga0103259_106037All Organisms → cellular organisms → Bacteria4015Open in IMG/M
Ga0103259_106518All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales3693Open in IMG/M
Ga0103259_106672All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonia → Candidatus Nanosynbacterales → Candidatus Nanosynbacteraceae → Candidatus Nanosynbacter → Candidatus Nanosynbacter lyticus3604Open in IMG/M
Ga0103259_107577All Organisms → Viruses → Predicted Viral3113Open in IMG/M
Ga0103259_108848All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Alloprevotella → unclassified Alloprevotella → Alloprevotella sp. OH1205_COT-2842643Open in IMG/M
Ga0103259_109135All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pasteurellales → Pasteurellaceae → Haemophilus → Haemophilus haemolyticus2551Open in IMG/M
Ga0103259_109961All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Alloprevotella2314Open in IMG/M
Ga0103259_111111All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium2059Open in IMG/M
Ga0103259_118297Not Available1169Open in IMG/M
Ga0103259_121489All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria972Open in IMG/M
Ga0103259_121919All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria951Open in IMG/M
Ga0103259_123021Not Available902Open in IMG/M
Ga0103259_137552All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes507Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0103259_100001Ga0103259_100001316F051210MNNYSQIMGNSAMMDALRASSVSAEDARLRGNEYAKMFSRNEEMMNVFGLGGNNANLLQKTFSGYSETPLLSTQYFNASVASYVSSFAGYMSIERDFDQPNGLFYWFDVLGVTDLRQVLPNLGPDQYQDVQVMGAFELPVTINTGTAAYSPLVGRKLIPGTVRVKVEDGTGKKFELIDNGQGSFMAVAGVLKTGTVNYLNGKIDFELTTAISNPAGKITIVGKEDTTGTPSCTNGASNAHANDKRFIAKMQQVALNTVPDMLVAEYNIAALGAMKKATGSDMATFLFTKLRELYTKTINYRLISTLEKGYTGDVMNDLDLSNASTSLASKFQDYRSRVDLFDAYLINVETSLATRAVKGVTTTAYVAGNQAANQFQKGGVIGKFERNTKMTYISDLLGWYDGVPVLRSTDIHEEQGEGTFYAIHKTQDGQMAPLARGIYMPLTDTPTIGNYNNPTQMASGIYYQEGVRYLAPELVQKVSFKFGF*
Ga0103259_101111Ga0103259_10111115F081455METIAKTKNIGFINNLINTCDGYIKINHKEKLRERFPRNTIIEEKDIPPVEEIGAEKVDIIDVAEEAIQQPLQNKDSSIAVNFSQMVNKPKEEVKTEVNSVPPEGETKVNVLFPKTEHILGNYVDYDSFIKIKESNTDKVVRAIRLLNYKMSDQNAAAAFAQFVSEFNPECDPNKRLRYELIRHQGREKYLVIRLSTVVNGTTKYYADIYPDLNKIDLDHHLISSAKK*
Ga0103259_101111Ga0103259_10111116F080166VNILANFENYNKVVEQIFELNYYLTFKLEVTFNTIHKKINTEIKENFHSEYVVGANKLTTNLRYKYQMRLSPRGEKIGIVIDWDNYDDLCTIIEESINICDPENKMSPFKRLYSTTGDLLDIKCDSLKVRYLHLEDRWNNKVDLIPFVLVDDNRGTLTEAMRFRFNNDLTFDVPVSRLKGFRRFLMTYNPVLHAGAMARYMAITPLLGTNRQNMLR*
Ga0103259_101226Ga0103259_10122610F095631MASDAVSVNKTLRSYQETVLNTVQNDTLLNANIYDIHQYIENIKKRYVDEDEITLSMGIFGYMGDVNSNALQNAVTMAAEYSNEAIPIKAKFEKNVISHALMLGINKIFAEPATMQAMFVFYEDELILNTVSDTFKFDRNIKIMVGDYEFHLPYDLIIKRIELPTGEYIYTGMYDTTQSNPIITRNSNDVDPYLKPTVRSKIDGRNVVMLLVDLRQYEYTTYHKTIITTNPLESKMLQFEFDNQLAGFDVDIKEYDQPTRKLKPVYNGLNTDGINNFCNYTYIDSSTIRVMFDNSSYLPTANTEVTVNLYTCQGSNGNISYKDSIYFRVKSEKINYDRLNLLVIPTSDAQYGIDKRSIADLKKLIPKEALSRGSVTNSTDINNYFNTIDDDDNKLFFFKKMDNPLARLYYAFVLMDSPTNIIPTNTIPIEAIRRDFDNISDSNYILTAGNIIKYDGTTNASVAYQSSEEELNNARKNQFLYMNPFMCIVNKKPLYVSYYMNIMDVNKLLEFTYVNQDSKVQFVANKMNWYRHYLSERDTYVGDISIMQNIQSDIGLVHRDDPYDPEKITGVDVKVLAVFYTDEKYQVPYRWTEAEFVNYDQNTFIMDYKFKLNTDNKIDKNIKLKINNVYEVGNATRLSPGYMANNMNMKIFVFAKDVFGYNAGLHKADQIFTADFLEGYSLTNEYTVKYGIDFLYNYSDLIESHIKIRKQDNGQISYIIDRVPVISYDYVNTEERIQDFINNLEKKRIHILECLDVLEDSFGIDIKFFNTYGPSKLFYVNDGVPLNRVNLSMTFKVKFLTTTDKYLTEYIKNDIRKYIEDKSRISDIHIPNIITFITQKYAENVTYFEFLDFNGYGPGYQHIYRKDESIVGRIPEFLNINTIGTENNALDINIIIA*
Ga0103259_101408Ga0103259_10140813F103433MIFVMKEWSKNKPGVVFFFVVWFILSISFIGNFFGTGLWSGWFDGFQKDSSAIVEKTAYCKNKYDYKGPLIAVDSKEMMSQDCNPSQVEPYVSQYGLQARVIAGLSPNDTSKIPAYIKRVSIFLAVLTAFLLALVVQKIRALFGGITASVFVVMLSFSPWTAGYARNIYWIEPLLIAPFVISFVGYQYFKKSKKLWLFYIIESIAIFLKLLNGYEYVSTIAISVLVPIVFFELVHKNVKIINLWKQAVPVFTATVVAFFGAYWVNFVSLTDYYGSSDKAASAINAKASYRGISGIRSMRAYAVGNFKILRPETYNFINQIVNLDNMANNSGKTYKYIIVNVVNYLLLPAITLPVHINGMFGEFVQSILFWTILGYLIILSSRKIIGKKYSRPFLWSMNFSVIGAFCWLALMPGYALPHAHINGIIFYIPLLLFVYVLIGLWADCVVKRPVKYE*
Ga0103259_101608Ga0103259_1016085F105378MNVKVYVDKIKKWVQISSDEVLDVNKNLSDLKDKEAAITNLGLYEKFISKEALESGFLPDVFTPDNIVTDSIHQFVTDEEKNKWNNKLNVPVPMQDHLANNQIGYDSVNSKFYIGLNNQNVLLGGSSCFDNIIVVNGFFSGNSQPTVIRNNKFNEAGQLITPVFVDVQCVEYTAGDLGEVSVSYTTDAISIYNTGSFTGSFQCLIVYPLGSVNE*
Ga0103259_102103Ga0103259_10210311F095633MRNYENSTEVGCREGLTEGELRTMGTLAMEATEELKKTTISKEAVLLGGVPFNSWDEFAKAVQEMAAHSYEPIPVKINTKRLIATAFLDDRGEMSVEENSVPEEVFIDLSRTRCVVDMDRSHKSYKFTCPVLKKYPSGELYPIREAYVISAIDVNGSQEVDFKVI*
Ga0103259_102308Ga0103259_1023084F105379MVIHFPLSQSDIESLLSISKLLKCDKILYDRNYINPIIGVGPEKSYFQTTSYMVDLSLHINNLLVNISDLKNLGKITQLEPSIENPEIAIHKPVVSVFNWDAEYVKACMNSLREYQIDDNIIARTDEFHNTDCYNELMAGSASTGAFRINIGGYMIDIPKSAIPTLKSDHVVATVYNAPNKNFNILRFKITKRNGIIVNQSMLFLPY*
Ga0103259_105566Ga0103259_1055663F099453MNRFDVIELAQQTLTFVYDTFNGKVNTLDPYTRLNFVSGYLDTKTNIARTTPYGCIYVSLEAFADTVERQGFIDTDQIRNLALEIIIHELTHVDQLIDYKYIKFNNGYREEVELKCVKQSCQWILDNIQYIRSLGLVVIPEVYQARLANLTDIIYTPKYPMAIAMAKLEYMLGKKFREFSNNNIEIQYIDRLKTHYSFMVCENRSYINSRNLNDLGERLLNDKQYTVEYLEYGNSKLVIKITQGA*
Ga0103259_106037Ga0103259_1060375F033081MLPPYFMVVHRPQKGAMAWLLRRAMPRDTRPIFVWPKLVVAIEGYFHRRWLVAIAVLLIAVTIVIAKALLLVPGLDNSVVGLLTSIFETFLPARWATGAAWVAGMTGVFLIGDFTDYTPSQKSLHSLRATKWGVYNALLLFALWEEQAFRSGSEKWSWRERVRASVCFGAIHVVNIWYSFAAGIALSVTGFGFLLVYLWYYRKYRNQIVATAAAATVHTLYNVIALSLIVVAAAIILVIDIAKMM*
Ga0103259_106518Ga0103259_1065182F032313MYRFLILLYALTLMACDNDTPQEKPREQEKHEVPVPKSKPQFDEVGERIWYEQTPTMRLDSTDYGAGLTPVFGMRTSSISKQRFDSLFKQTVWEIKDIRVVETDLSLAKKNPGILGWVTTTEFTCRNGVILLHKQGIRVNHVDTVNYVYDEVGNEIVLEGTGIRWSVLRLNKNAVEFLQRGHTMWGPFDWYYGRNSGRSEVMLEAK*
Ga0103259_106672Ga0103259_1066725F046433MIELPTSPDALSELSPVALPKLLSQAQDASRDNLMVYVKADNYLGTETSDPSFMKSRCEMTEYEAINDFVQFIEMTKHYLPDYMEYCAKELIDELVFLGMSELHFAATALAKRLRHHLEVDNNPVYIDVVNSLSQCRVKNEMKSSQYILSLVLSKFPDDEFEEYEGRLKVYGGRGEIDKSSKVLFLDDWIISGDQVKKRIAGFGVDNDPESHEASVLVMAASSNYIDNGIGADSLWGEATYPVEAYYRLKNDHNDWGVSRVTGIHSSTDSAFGCEVDDIAYRAIDGGILKGERIDRLTLPALVNIVRPYRNGEDFDGLSRFRQLLEKG*
Ga0103259_107577Ga0103259_1075773F095629MTFKERMMRELIICLCLLGCFSVANANNVEQPKEVKIVHNDDSVALHKKIYQLEKRIERLEELLKKEDK*
Ga0103259_108848Ga0103259_1088485F068942MIRKILSLPTLALCFTLGSAFFAGCNENYIENTETKVRWSNVKNPKYGDYINITLKAEGETFTTVGDHSRISFSGSVSTLDTFTRHDIPKVDKDTAYYKDIVIYLTRNESKGTATLKLVAPPNRTQQPKQFDFSIEVTPPSLYIFKVRQPALPAKAQ*
Ga0103259_109135Ga0103259_1091355F073671MESLLRLRMTNNKQAEHELAELHEKERSLEKALELVREKIRELVNYTDKNKEQK*
Ga0103259_109961Ga0103259_1099612F072446MKKLLFLLSGLCLYCLAACDNDHEPTKPVRPFHGDTLAQIAWNFRFIVENHYHSIPGIVPEGTTYRVPVIPRSVEDRTEKEYNDMELGKEAHLVFRATVHGDTINRHKKELKALSLQLNRLTETSIGTSPVLCGVKSIEAVGVAERGNTYDLRGEMKLRIRDYSYRLKYPSGIITLDCENTESLTAKYVVPLGRIREYELAEHIQPELKFYLPVKRCMDFSSIRFAITLFNGKVLSFQHKLPSKSVLQELPSKSVQQYYTPNGYEREATYFTALWPVHDKYNEKEW*
Ga0103259_111111Ga0103259_1111113F046432MQMSESRLSDVISKYQMPEGRYSVEGEGSFGESEFFWVIKNQSTNQKYLLVNTYSHHGVEAELECYREGGFENLEAIPRRIETLEIASYADDEISKYLFGMFSLFEIKS*
Ga0103259_118297Ga0103259_1182972F085820MYEKTTFLLLLSENDYLCMVLIRNCSNFIRALMRSTFYLFAMLFLATTFFSCETGEPAPRPTWGEIVNPIEAFMYPRDLKVFADGEEGRRWLILVVPDSTKSSFAPTSKSTPAEVARYKELSQLVGNPTEPVVNECHFHRTWLTQGVKAIRVVRTRADGRDEDVTAQCGNLYFYTDKQIFDCQFKCGNRSIFAKPLGETVEADYLWLPGRDVFGLVAPLNPDGLKQRIVLRLADGTEIEKELSDKGK
Ga0103259_121489Ga0103259_1214892F094007MKSKTVEVLELARPNRAGVIDVVDSDGNVVPLDYLGEDFVPDANSYSDEDFTKRNRIIVEMCDLFGRIRRRAGFAERHRGRGDYDRARRIERNRGSDISEVGRLAMNACEACPLKLDCELYGKLGGAVLSDVLDYKKVRTATSLTKAGKKRPGWNKGCIDNNA*
Ga0103259_121919Ga0103259_1219192F078842YGDTCFMDAELYSPEAKKTYDEALREFDKLVIPEDDILRAAGECGIEMNRNIVEVDRSELSKKLREVQISPWRKQIDMAYRKAHDESSVNTLFRTSYIKYSKESDDLFRECVLEYSIDESHIQTPVDQALAAIVMQIVALNFLTVVREKYTVYDRGDQWSEASISVGYRMFLGLLKKDDKIINQLSCDFLEYIKILSSSVFCDNLQRAFVRCSDNHKQVILNRSTLNAVLGGCIIGGKGWLEMADSAQIRRMINSIELDIYEVNS*
Ga0103259_123021Ga0103259_1230212F103432IHSLFSLSLLLVLGGLLCIPACQDDAEPTQRTGLISTDSLIHAAEVYDGKAFEHVVSTTATGLRVSEPRRVVPMLPRQLHVEMEGKTLFRRHSLPSVSAYSLQVVAVGDTIYRQKESDAQFNADLDALFHQSIGIAPRLFGVKELSVAGIDRKGKPRDLGNYSCPLLQGKRRNVNFRTKEGVFHEYFEAASVDTFSVKSNWLLKTKAEPSLYAPSFRLLVWEQPAEGCTKLRFTLTLVDGRSLVAEVPLR*
Ga0103259_137552Ga0103259_1375522F081456SLIFLIVFGAISFATWLVWLTNAAFFVKLVITAIGILFAAFTVILYTISAE*

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