Sample 3300007325

3300007325: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S9 Surf_B metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007325 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0119822 \| Ga0079257
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S9 Surf_B metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	142853414
Sequencing Scaffolds	50
Novel Protein Genes	66
Associated Families	41

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	1
Not Available	24
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Eukaryota → Sar	5
All Organisms → cellular organisms → Eukaryota	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1
All Organisms → Viruses → unclassified viruses → Virus sp.	3
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Syndiniales → Amoebophryaceae → Amoebophrya	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Ochromonas → unclassified Ochromonas → Ochromonas sp. CCMP1393	1
All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000020	Metagenome / Metatranscriptome	6197	Y
F000070	Metagenome / Metatranscriptome	2710	N
F000254	Metagenome / Metatranscriptome	1450	Y
F000613	Metagenome / Metatranscriptome	985	Y
F001145	Metagenome / Metatranscriptome	765	Y
F001219	Metagenome / Metatranscriptome	744	Y
F005882	Metagenome / Metatranscriptome	387	Y
F005911	Metagenome / Metatranscriptome	386	Y
F007527	Metagenome / Metatranscriptome	349	Y
F009522	Metagenome / Metatranscriptome	316	Y
F012124	Metagenome / Metatranscriptome	283	Y
F020014	Metagenome / Metatranscriptome	226	Y
F021115	Metagenome / Metatranscriptome	220	N
F023135	Metagenome / Metatranscriptome	211	Y
F028188	Metagenome / Metatranscriptome	192	N
F029784	Metagenome / Metatranscriptome	187	N
F034581	Metagenome / Metatranscriptome	174	Y
F034959	Metagenome / Metatranscriptome	173	Y
F035327	Metagenome / Metatranscriptome	172	N
F036277	Metagenome / Metatranscriptome	170	Y
F036730	Metagenome / Metatranscriptome	169	Y
F041143	Metagenome / Metatranscriptome	160	N
F042354	Metagenome / Metatranscriptome	158	Y
F043982	Metagenome / Metatranscriptome	155	Y
F046429	Metagenome / Metatranscriptome	151	N
F049657	Metagenome / Metatranscriptome	146	Y
F051986	Metagenome / Metatranscriptome	143	Y
F052632	Metagenome / Metatranscriptome	142	Y
F053817	Metagenome / Metatranscriptome	140	Y
F054104	Metagenome / Metatranscriptome	140	Y
F058963	Metagenome / Metatranscriptome	134	Y
F064786	Metagenome / Metatranscriptome	128	Y
F071278	Metagenome / Metatranscriptome	122	N
F088945	Metagenome / Metatranscriptome	109	N
F089917	Metatranscriptome	108	N
F090440	Metagenome / Metatranscriptome	108	N
F090441	Metatranscriptome	108	N
F090442	Metagenome / Metatranscriptome	108	Y
F092118	Metagenome / Metatranscriptome	107	Y
F095055	Metagenome / Metatranscriptome	105	N
F097482	Metagenome / Metatranscriptome	104	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0079257_1007708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	747	Open in IMG/M
Ga0079257_1007746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	607	Open in IMG/M
Ga0079257_1012621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	615	Open in IMG/M
Ga0079257_1035438	Not Available	803	Open in IMG/M
Ga0079257_1036308	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
Ga0079257_1042258	Not Available	919	Open in IMG/M
Ga0079257_1050387	All Organisms → cellular organisms → Eukaryota → Sar	2613	Open in IMG/M
Ga0079257_1056366	All Organisms → cellular organisms → Eukaryota → Sar	857	Open in IMG/M
Ga0079257_1079706	All Organisms → cellular organisms → Eukaryota	1063	Open in IMG/M
Ga0079257_1198191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
Ga0079257_1204309	All Organisms → Viruses → unclassified viruses → Virus sp.	656	Open in IMG/M
Ga0079257_1218855	Not Available	949	Open in IMG/M
Ga0079257_1225650	Not Available	538	Open in IMG/M
Ga0079257_1238380	All Organisms → Viruses → unclassified viruses → Virus sp.	501	Open in IMG/M
Ga0079257_1239288	Not Available	511	Open in IMG/M
Ga0079257_1241957	Not Available	822	Open in IMG/M
Ga0079257_1257031	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	526	Open in IMG/M
Ga0079257_1260746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
Ga0079257_1263236	Not Available	884	Open in IMG/M
Ga0079257_1264503	Not Available	768	Open in IMG/M
Ga0079257_1269192	All Organisms → cellular organisms → Eukaryota → Sar	540	Open in IMG/M
Ga0079257_1269807	Not Available	591	Open in IMG/M
Ga0079257_1272300	All Organisms → Viruses → unclassified viruses → Virus sp.	2126	Open in IMG/M
Ga0079257_1273609	Not Available	538	Open in IMG/M
Ga0079257_1278570	Not Available	697	Open in IMG/M
Ga0079257_1283804	Not Available	639	Open in IMG/M
Ga0079257_1284140	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Syndiniales → Amoebophryaceae → Amoebophrya	791	Open in IMG/M
Ga0079257_1286068	All Organisms → cellular organisms → Eukaryota → Sar	1860	Open in IMG/M
Ga0079257_1292373	Not Available	711	Open in IMG/M
Ga0079257_1292388	Not Available	1054	Open in IMG/M
Ga0079257_1302930	Not Available	508	Open in IMG/M
Ga0079257_1303407	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Ochromonas → unclassified Ochromonas → Ochromonas sp. CCMP1393	769	Open in IMG/M
Ga0079257_1303784	Not Available	556	Open in IMG/M
Ga0079257_1315997	Not Available	778	Open in IMG/M
Ga0079257_1316640	All Organisms → cellular organisms → Eukaryota → Eukaryota incertae sedis → Picozoa → unclassified Picozoa → Picobiliphyte sp. MS584-11	938	Open in IMG/M
Ga0079257_1318756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1505	Open in IMG/M
Ga0079257_1337896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1729	Open in IMG/M
Ga0079257_1341549	Not Available	617	Open in IMG/M
Ga0079257_1342021	Not Available	697	Open in IMG/M
Ga0079257_1345677	Not Available	582	Open in IMG/M
Ga0079257_1352156	Not Available	738	Open in IMG/M
Ga0079257_1369365	Not Available	519	Open in IMG/M
Ga0079257_1373883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	648	Open in IMG/M
Ga0079257_1374029	All Organisms → cellular organisms → Eukaryota → Sar	600	Open in IMG/M
Ga0079257_1378547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	717	Open in IMG/M
Ga0079257_1379285	Not Available	773	Open in IMG/M
Ga0079257_1382180	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	672	Open in IMG/M
Ga0079257_1382312	Not Available	510	Open in IMG/M
Ga0079257_1383829	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
Ga0079257_1388383	All Organisms → cellular organisms → Eukaryota	597	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0079257_1003062	Ga0079257_10030621	F034581	LVWETTKSYAQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDTPRFPAEMNITCRPGFNGSSWGPNFYRTSTTDGEWSGSMPLCLGVPLAALYEKEVFVKDGTLEVVPVKELTPVFVSGRGGAMPILEARDECGDDQLWCDLVAPSAGHMLVWETTKSYAQEVELHWTGSTSEYIVEIYNTNTVPSQNI
Ga0079257_1007708	Ga0079257_10077081	F042354	LIMKKSNPFVILVALLLSATSAFSQASVSAGLSYGSFNYDISGTKYTGDGGVLNLDGQLSPSITYSLSMSDGKFDDQVLSNSEGSITYNVYPNIGVHFMGSQIKLSTVQETDTSLGFSYNINASSLGIKVFAGSDINNYGKFYTYGTDINLGVARGSSLILSYKTEDRKQKATTMDARFVYDLNSRLGLNFGYKSTETKNAAGTAVVLKGNTTYAGIVYRF*
Ga0079257_1007746	Ga0079257_10077461	F042354	GDGGVLNLDGQLSPSITYSLSMSDGKFEDNVLSNSQGSITYNVYPNIGIHFMGSQIKLATVQETDTSLGFSYNINTPTLGINVFAGSDINNYGKFYTYGTKINLGVTRGSSLILSYKTEDRKQKATTMDARFVYDLSSNLGLNLGYKSTETKNANGSAVVLKGNTTYAGMVYRF*
Ga0079257_1009546	Ga0079257_10095461	F034581	GSTSEYIVEIYNTNTVPSQSIPLDTPRFPAEMNVTCRPGFNTSSWGPNYYRTSTTDGEWSGSMPICAGLPLPSLYEAVVFVLGSSLKVTSVAELTPDFVAGRGAAMPILEDRDECGEDQLWCNLVAPSAGHMLVWETTKSYTQEVELHWTGSTSEYIVEIYNTNSNPSQSIPLDTPR
Ga0079257_1009843	Ga0079257_10098431	F034581	MNITCRPGYNTSSWGPNYYRTSTTDGEWSGSMPECVGVLLPALYETVVFVQDGTLEVSSVTELSAEFVTGRGSGMPILEDRDECGDDQLWCDLVAPSAGHMLGWETTKAYTQEVELHWTGSTSEYIVEVYNTNSNPSLSIPLDMPRFPAEMNITCRPGYNTSSW
Ga0079257_1012621	Ga0079257_10126211	F064786	LKTLCQLIIRRILIITKRRAIVLSNKKYEIIEHKEMQKLVFINLFFITDIDKHVRPKDRKE*
Ga0079257_1035438	Ga0079257_10354382	F090441	LATLSFPDSLALGALITRRVIVGCQLPDAVSYRKNDCDTFRSHSGT*
Ga0079257_1036308	Ga0079257_10363081	F021115	VPLLISKNTKEEKKMRNHESNAELDNPLSSSKIGAYSGSIRASFYLKGKLHKSIPSVEINDELRSVICNSKIKIKPYHVSNKNGLFEIKLPENIRGGLANLIIVKTLTTVGLRYKCNSCRLEVDGNEKTICFHY*
Ga0079257_1041831	Ga0079257_10418311	F034581	CGADPLWCDLVAVSAGHMLVWESTQGYSQEADLHWTGSTSEYIVEVYNTNSEPSQAILFDVPRFPAEMNITCRPGFNTSSWGPNFYRTSTTDGEWSGSMPVCMGVEMASMESMPSFVKAGSLSVSPVAEFTPSAASSGAAVAILEDRGDCGADPLWCDLVAVSAGHMLVWESTQGYSQEADLHWTGST
Ga0079257_1042258	Ga0079257_10422581	F090441	VWELATLSFPDSLALGALITRRVIVGCQFPDAASHRKNDSDTFRSRNGT*
Ga0079257_1050387	Ga0079257_10503871	F001145	NEEPLIQLNPNILESNVQNIVILLGILIYANNVSFSVTLENRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKMLYEKDKADLVTNKYTMIKKGLEETFETTENLIKNVENKAFISIQRYMIFITASRILRKFLSLSEAEQSKIVEITVSKLGGRK*
Ga0079257_1056366	Ga0079257_10563661	F001219	MIFPTTIFINKLFDFDLTFVIELGLFITLAIIVTFKFINPISKEIDDRAEFINYNLRKSTILLTFGYEKLSDCISLLTQEINELNRQTKLTRNYCNSNFENEISSIQKENLKILSELKGDLSIKSAFLFSNISGDLNSLTDKFFEKKFQSAP*
Ga0079257_1079706	Ga0079257_10797063	F090442	KKAVEAIVIKLPNEATVFQAVYESGKSGTRRGIPAKPKKCIGKKHKLTPINVVQKWILPNTSG*
Ga0079257_1088360	Ga0079257_10883601	F036277	LCSNPFVDKSTQYELHSPNKTKIDLIYLGSASLNNLRITLSAH*
Ga0079257_1198191	Ga0079257_11981911	F041143	MPNPRIDGIDWRSLQKGDVIPEEHILDYWNTCYPDKEWDKFSMVTVKANIEKLREGINRPIILKEVKGTLVVLTDKEAVDYSAAQANAGIKKHRRHTRRLFTHIDSSKLDQAKKRDLETKQIHHAFIASAADGARKESLQLQRKGERLPKSLIEKSDFKKSS*
Ga0079257_1204309	Ga0079257_12043091	F005882	LYACGRVAKVFSSTKDLDWDAIANITGDLATTKRTIQTLNNRINGMHSPKIAEQELLMQLMQNKQQKPNGKVIGG*
Ga0079257_1218855	Ga0079257_12188551	F051986	MTAITQTTYNVTCKVCASIANFFKAIVKRISYGMQMSANQRVARELVHLGFHQQKEMNQILQRMNDKTNEEYYSRY*
Ga0079257_1225650	Ga0079257_12256501	F095055	LIRIVENQLLNAEIAERFSYAQTSLREESEPLWYFGIHFIGEEITVIALRDQSAAGGKEVLDFIMAAGEAEKKCVDLSPFLLSRKEEADLIREIQQVKGRIRSGDVAEAQLVN*
Ga0079257_1236305	Ga0079257_12363051	F000070	ETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNVADTEARLKNELRQKQAEAFEKIASVEQQAELRSAEASRRLGALDLRMSGVQGGLGEHKRDILKLREEVNGLTVKSASHEVELQKSADMLRKMEKQRNQDEQNWKAQMD
Ga0079257_1238380	Ga0079257_12383801	F043982	LFIALTSFFLCLYACSRVGNFIKSTEGLDWSAIANITGDLATLKKTIQTLNNRMNGMHSPKVQEQELVMQLLKNAPNQVTNGELKNVGG*
Ga0079257_1239288	Ga0079257_12392881	F034959	KIEINKEQLEILKYAVLWYECNDKEEERIVNELEEKLYNAQEQDLLRSFTNMGGLH*
Ga0079257_1241957	Ga0079257_12419571	F005911	KGGRKTMSLKTRLLTMLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGSGTEADIESPVSELFHNGNFITLKEMVKKAVIIVSDDPTATARSGVDTAYDADNSGVLIKFADADGTVIADGTGGDTIVADVHLFVNLAGTADANTNAPYTAGEPFYYILMDDVTAGFNDATARTIDLTQFPTGILATNDGGPQAEVSVVLPQDTEE*
Ga0079257_1257031	Ga0079257_12570312	F000254	MGKGKGQVPQFDLATALTRKETRVIRKAEGMIQYNLARCPNYGVFESPEWARAEELKEQIKNIEAKAKKRWEAGF*
Ga0079257_1260746	Ga0079257_12607462	F035327	LIKTDIQTSKVLAEGLKKIVKLEGVDEKKEPYEKTKKVTKGVIVALSSEAKQKVIKSI*
Ga0079257_1263236	Ga0079257_12632361	F005911	MSIKSKILNMLNSKKGNALLLATAGTIAATFGVYFFVTLTTLSEDSKQRVAHLYNAYQMGQAIKAKIDGADINQARLGSGTESNIEAPIDDLFHNGNFVTLAQMVKKAIVIIADDPTATARSGSDLGYDLINSGALIKYADAAGNVIEPDSDDGSDSVPIVTDVQVFVNLAGTADATTNSPYTAGEPFYYILMDADTAGLTASDITVDATQFPTGILATNDGGPQAEVSVILPQDSE*
Ga0079257_1264503	Ga0079257_12645032	F007527	VTVAPEHNKISVFNKGISIGSKTSIPFGGQIAPISITGARAAAKKAQKNAKKNITSEAINKIIP*
Ga0079257_1269192	Ga0079257_12691922	F092118	MDLNTLSFFLNEEPLVQLNPNILESNVQNIVILLGILIYANNVSFSVTLENRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKMLYEK
Ga0079257_1269807	Ga0079257_12698072	F007527	VLTNGTSKGLKASIPLGGQMLPISIVGEILAAKNAQKKAKKNIISETINRIIP*
Ga0079257_1272300	Ga0079257_12723004	F043982	LLYSSLFCSILAFIMCLYACSRVGNFIKSTEGLDWSAIANITGDLATLKKTIQTLNNRMNGMHSPKVAENEIMLQLLKNAPKQQVNGEIKNIGG*
Ga0079257_1273609	Ga0079257_12736091	F007527	VFSKGTSIGSKTSIPFGGQMEPISITGANAAAKKAQKKAKKNIISETIN
Ga0079257_1278570	Ga0079257_12785701	F005911	LLTLLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGGSTEAELEAPIDDLFHNAQFVTLKEMVKKAVIIVSDDPTATTRVGTDTGYDLDNSGVLIKFADVDGTVIDDGTGGDTLVADVHLFVNLAGTADATTNAPYTAGEPFYYILMDDVTAGFNDASKRTIDLTQFPTGILATNDGGPQAEVSVVLPQDSEE*
Ga0079257_1283804	Ga0079257_12838041	F071278	KRGKITMSLKKRLQFLLKSKKGNALLLATAGAIAATFSVYFFVSISTLSDDSKQRVTHLYNAYQMALSVKGKINGDSMQANKLDGTNVEDSIEDSLDPLFHNGSFITLKEMVIASIIIVQMDPTTTSERGEKIPYDVNNSGVLIKFANSTDDVITPSAENRPIADRANLAKVHDLHLFVNLAGTTDIDSRPNGPYAVGAPFYYVVMASDADT
Ga0079257_1284140	Ga0079257_12841401	F049657	CFYMCAYAVMFQTILSVAIPIVMGGTVKKGSTEGDMVYEVSNKPIGMCLTACRYIIMLSIYIGFTAVVVSIFTLEHPDGAQYTPPISPTVQCVLNLTFQFFFIYLMVWACISLREWTNMEWPLLTNTMESCMGTVAFCSMLAILFVGTRMRALQMTNNKGAPQGWAQDGMYLATWSIFVQFFMVIIAGVATGEKVKTDADGNATWNPGNIYLWYAVQVVRWFAVLALWGGAITVIVSVFTITPETANGRGAIPLVTDGTVPVV
Ga0079257_1286068	Ga0079257_12860681	F001145	QLNPNILETNVQNLVILIGILVYANNVSFSVSLENRQKEIIQTIENAQKDVLNASNYYYLAEKGFTQSLFWLQSWKVLYEKDKIDLVTNKYNLVKNGLLETFTTTENLITNFEKKAFISLQRYIIFVTASRILRKFLFLSEEEQSKLIEVTISKLGGV*
Ga0079257_1292373	Ga0079257_12923731	F005911	EKGGRKTMSLKSKLQQFLNSKKGNALLLATAGAIAATFSVYFFVSLTNLSEDSKQRVAHLYNAYQMGQSLKAKIDGADINQARLGGGDEDEIEAPIDDVFHNGVFITLKEMVKKAVIIVSDDPTATARKGYDIGYDLDNSGVLIKFAAADGNVIQPDQGDADDTIVSDVHLFVNLAGTADTDSNAPYVDGTPFYYILMDSTTAGLAASLETIDLSIYATGILATNGGGPQAEVSVV
Ga0079257_1292388	Ga0079257_12923881	F071278	MGLKKRLQFILKSTKGNALLLATAGAIAATFSVYFFVSITTLSDDSKQRVTHLYNAYQMAISVKAKINGDSVQMNYLNGEDVEDDIEDVLDPLFHNGSFITLGEMIIANIIIIQDDPTTTAERGEKIPYDTANSGVLIKFANVNDEVIPPTAENRTNDERAALAKVHDLHLFVNLAGATDIDSRSNGPYTEGDPFFYIVMASDTDTGRTDGLTDDLKTVDLTQFPTGMLATNQGGLQAETSVILPQDYE*
Ga0079257_1302930	Ga0079257_13029301	F042354	AFSQANISAGLSYGSFNYDISGTKYTGDGGVLNLDGQLSTAITYSLSMSDGKFDNIVLNNSEGSITYNVYPNIGIHFMGSQIKLATVQETDTSLGFSYNINASSLGIKLFAGSDINNYGKFYSYGTKINLGVAKGSNLMLSYKTEDRKQKFTTMDARFVYDLSSNLGL
Ga0079257_1303407	Ga0079257_13034071	F012124	MLFLLATPEYNNIQSNTTKVRVHLRNGVAEIFDQHQDLMGKIDNNILEVETNFENKIEKLLFVLQDAVFIVSNQGLDVNSDNKGTGIYVYAKKVKEITSSVSVDEVSKEYEDKKTSLEMENQKLGSDEEENKAINSKIFVL
Ga0079257_1303784	Ga0079257_13037841	F042354	FLLSATTAFSQASVSAGLSYGSFNYDISGTKYTGDGGVLNLDGQLSPALTYSLSMSDGKFDDVVLNNSEGSVTYSVFPNIGIDFMGSQIKLATVQETDTSLGISYNLYTPSFGIKVFAGSDINNYGKFYTYGTKVNLGVSQGSNLTLSYKTEDRKQKATTMDARFVYDLTSNFGLNLGYKSTETK
Ga0079257_1315997	Ga0079257_13159971	F005911	MSLKAKILKMLNSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSLKAKIDGADINQARLGSGTENDIEAPIDDLFHNGNFITLAQMVKKAVIIVADDPTATARSGSDQAYDLTNSGALIKYADAAGNVIEADSDDGSESVPIVTDVQVFVNLAGTADASTNSPYTAGEPFYYILMDADTAGLTASDITVDATQFPTGILATNDGGPQAEVSVILPQDAE*
Ga0079257_1316165	Ga0079257_13161651	F000020	VVGMLEVIQSDFARLETDTKAAEAEAQKAYDEFSTESAVNRAANTKDVEHKTTKKTNEESALTSKKADLEGTQKELDAALAYYEKLKPSCVDAGVSYEDRVARRKEEIESLQEALRILNGEDLAFLQK*
Ga0079257_1316640	Ga0079257_13166402	F028188	LHSVLLNDSFALDFICATPLEQFQVLPLSAQVYPASASISSLEQCNLFPQVSTDPEFVYISGATLASKLTS*
Ga0079257_1316783	Ga0079257_13167831	F034581	ARGAAMPILEDRDECGDDQLWCDLIAPSAGHMLVWETVKSYTQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDMPRFPAEMNITCRPGFNTSSWGPNYYRTSTTDGEWSGSMPLCLGVHMPILFETATFVNAASLQIAKVLEQTPESVIGRGAAMSILENRDECGDDQLWCDLIAPSVGHMLVWETEKSYAQELELHWTGSTTEYIVEIYNTNS
Ga0079257_1318756	Ga0079257_13187562	F046429	QITDQEIAIQEGDLIIAKNVVTEARRIIGSANDVLTESTQRRVLKG*
Ga0079257_1320111	Ga0079257_13201111	F034581	GSTSEYIVEIYNTNTVPSQSIPLDLPRHPSEMNITCRPGFNTSSWGPNFYRTSTTDGEWSGSMPVCLGMPMAALYETAVLIKDGSLQVTSVLELVPEFVTGRGAAMPILEDRDECGDDQLWCDLIAPSAGHMLVWETTKSYNQEVELHWTGSTTEYVVEIYNTNSNPSQSIPLDLPRHPAEMNITCRPGFNTSSWGPNFYRTST
Ga0079257_1326839	Ga0079257_13268391	F054104	DKVEIVETKYKLVKTGLTNTFSTTENLIKNFENKAFVALQRYMVLITASRILRKFLFLSEAEQSKLIDATISKLGGFKK*
Ga0079257_1337896	Ga0079257_13378961	F001219	MTFSTTFLINAGSLFDFDLTFVLELLLFVLLALVVTNNFVGPISKEIDERAEFINYTLRKSTILLSFGYERLTKCVELLTNEINEMNRQVKLTRNFVNDNFEEEVASAQSQNLKLLSKLKGDLAIQSAFLFSNINDELTSITDKFFVKKFQSAS*
Ga0079257_1341549	Ga0079257_13415491	F029784	MCSQIYAHPVEGYKCFANANKSQGTYYTCCDLDTREIRYVTYIYDGYFMGYYLVQSATKVTENFANCQEKIFLSSASNKWPYYKGNDDEYTIDRQYPMQYDIPSLDEVEYSYLDSLLTAGTSK*
Ga0079257_1342021	Ga0079257_13420212	F000613	MPLVKKRLSVAAGATSDQVLAGTTYEYVDPGTRIVVAAAVDTAGTATADTTMDFTVNNAEFSKNTSVSALVTGEPFGWNGNYVMNDMVTTGQVRNRPVITFTNGTGATRTIDVAVFIGG*
Ga0079257_1342021	Ga0079257_13420213	F036730	LGQEFIIKSQKLEDKVNQLLPSQGGFQAGVDLSASTTVIPIVDLTETAEGSDVRVDLQT
Ga0079257_1345142	Ga0079257_13451421	F053817	KQLSELLQSRDLTCDELGLLYCYKHGVSTNQALKTIGIDMKLADFVKEQKAFVVEGKKVSLVRSDTALKPMSVAQQLEGILREQGPTMDITTLCSKFIQKFHVSVASIVQMRPVEFIQQEKEKFAMIGDGLVTLKEFEARESAKVSTSTARTATRSRSPGFVRSEPQAAVRSRSGERPRPKVALSQQKAENEEMYQELHTKISSRSFNSRVAQALS
Ga0079257_1345677	Ga0079257_13456771	F058963	KTRSTIRKMKSMCDMYDDLRPTARRRSPMRKARSTTTLIKN*
Ga0079257_1350469	Ga0079257_13504691	F020014	DCYNDDPKPEYAPKKNRINNPPAANPPIVATIQSGTRPASLIRTISLKYYFNN*
Ga0079257_1352097	Ga0079257_13520971	F009522	KTSLRAMAKAMKAMKAMKRVSKFAKGRYAKSVVFRGTKTSTVGGLTKASLMRNKNGKIVSKKASANGKKAYARIKGWTVAVTKARKALGVKGFLAVKKGTPLYKKAKEFYGQ*
Ga0079257_1352156	Ga0079257_13521562	F042354	ENIMKKLYPLAILASLIISVTTAFSQASVNTGLSYGSFNYDISGTKYTGDGGVLSLDGQLSPSLSYSLSMSDGKFDDVVFSDSQGSVTYNIYPNIGIYFMGSQIRLSTVQETDTSLGVSYNINTSSLGLKVFVGSDINNYGKFYTYGTKINLGVAQGSSVILGYKTEDTKQKVTTMDVSFVYDLTSSLGLKLGYKSTETKNAAGTAVVLKGNTTYAGITYRF*
Ga0079257_1369365	Ga0079257_13693651	F023135	AAIKPIMIALSAAKIISIKMICKSMSDSSNKVILF*
Ga0079257_1373883	Ga0079257_13738831	F042354	YGSFNYDISGTKYTGDGGVLNLDGQLSPSITYSLSMSDGKLDGQVLGNSEGSLTYNVYPNIGVYFMGSQIKLVTVQETDTSLGLSYNINTPTLGMNVFVGSDINSYGKFYTYGTKINLGVTRGSSLILSYKTEDRKQKATTMDARFVYDLSSNLGLNLGYKSTETKNGAGTAVILKGNTTYAGIVYRF*
Ga0079257_1374029	Ga0079257_13740291	F001145	MNFNFFSFLLNNEEAEALFQLNTNFLETNVINIGLLIGILIYANKTSFSVGLENRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKNLYEKDKVEIVETKYKLVKNGLTNTFSTTEELIKTFENKAFVSLQRYMVLVIASRILRKFLFLSETEQSNLIDATISKL
Ga0079257_1378547	Ga0079257_13785471	F052632	MLINGVNLMHHLNKCMLRLQKHKLEEKQLRSPNPLVQPKNSVE
Ga0079257_1379285	Ga0079257_13792851	F005911	MLKNKILNFLNSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKAKIDGADINQARLGSGDEDQIEAPINELFHNGNFIKLSEMVKKAVIIVSDDPTATARKGYDIGYDTENSGVLIKFAAADGNVIQPDQGDADDTIVADVHLFVNLAGTADTDANAPYVDGTPFYYILMDATTAGLADSLETINSTIYPTGILATNGGGPQAEVSVVLPQDSED*
Ga0079257_1381218	Ga0079257_13812182	F088945	DYAKVTLNTFQVLDDADDLAAGSILLMNGRRYKVAAAQTAGSGEGGIALTETFAGSTYLQLCSGCADSLLDDTVGNGGVGTNTATSSVLETDPNFGGGFDLKRGEQLLLGSATKFDALMSVVKDQVGIFDDAYTGTPANKIELCTGAGALGAKAAEIAAGSDVAIYKVHNTAGYKPVVVTESASNTNYQYVSQCSNRGACDGSTGLCSCFKGYTNDNCDTQNMLAA*
Ga0079257_1382180	Ga0079257_13821801	F020014	KSYKDEPRPEYAPKKNSVNKPRAASPPTVATIQRGTLPISLILIIVIKK*
Ga0079257_1382312	Ga0079257_13823121	F090440	EISGLKLATDLRLKRIYHCRITDVGEDYVLRIIILKSIGG*
Ga0079257_1383829	Ga0079257_13838291	F021115	LISKNTKEEKKMRNHETTAELDNPLSSSKIGAYSGSIKATFFKDSKRYTGIPSVEINDELRAIICNSKIKIQPYTVKNNNSHFEIVLPKNIKGGLANLIIVKTLTTVGLKHKCISCKLEVDGNEKTICFHY*
Ga0079257_1387294	Ga0079257_13872941	F097482	LFSSQNYISYNEVNLANYAHACFDKAMAEIVSKAITTNLLLQLIMNELILLKETLL
Ga0079257_1388383	Ga0079257_13883831	F089917	MDRQRAEFLQDMDTEPAAPEQGKPFAQSYSFSSFTSNTNGEVVTHRSENFQSSAGEKLSRSRRAIGQGESAKAIEETMKGEERTRTLHNMEEQDLQAFNQQHAARLHWQPFHALEPRAEQPKHALHAALEQDIDRVAGSQ*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007325: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S9 Surf_B metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences