Sample 3300008636

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300008636

3300008636: Human tongue dorsum microbial communities from NIH, USA - visit 2, subject 765094712 reassembly

Overview

Basic Information
IMG/M Taxon OID	3300008636 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0063646 \| Gp0052992 \| Ga0111420
Sample Name	Human tongue dorsum microbial communities from NIH, USA - visit 2, subject 765094712 reassembly
Sequencing Status	Permanent Draft
Sequencing Center	Baylor College of Medicine, J. Craig Venter Institute (JCVI), Washington University in St. Louis
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	127022988
Sequencing Scaffolds	6
Novel Protein Genes	15
Associated Families	15

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonas → Candidatus Saccharimonas aalborgensis	1
All Organisms → cellular organisms → Bacteria	1
Not Available	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Oral Cavity → Tongue Dorsum → Human → Human Microbial Communities From The National Institute Of Health, Usa, Hmp Production Phase

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal surface

Location Information
Location	USA: Maryland: Natonal Institute of Health
Coordinates	Lat. (^o)	39.0042816	Long. (^o)	-77.1012173	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F078842	Metagenome	116	N
F080164	Metagenome	115	N
F080166	Metagenome	115	N
F081455	Metagenome	114	N
F081510	Metagenome	114	N
F085820	Metagenome	111	N
F089055	Metagenome	109	Y
F089057	Metagenome	109	N
F092229	Metagenome	107	N
F092232	Metagenome	107	N
F095629	Metagenome	105	N
F095631	Metagenome	105	N
F099452	Metagenome	103	N
F099453	Metagenome	103	N
F105379	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0111420_100019	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	234740	Open in IMG/M
Ga0111420_100262	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	56876	Open in IMG/M
Ga0111420_101645	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → Candidatus Saccharimonas → Candidatus Saccharimonas aalborgensis	10784	Open in IMG/M
Ga0111420_103435	All Organisms → cellular organisms → Bacteria	5619	Open in IMG/M
Ga0111420_110908	Not Available	1812	Open in IMG/M
Ga0111420_113969	Not Available	1399	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0111420_100019	Ga0111420_100019110	F092229	MNKEYRFNHIPEVVLRNIRFIRDNNIDIGTGDDVLECMMDINPVVRTKIYDDYEFAKDVAERRFGSTIEKLDLRTVLQKCITRPYNSILNNIFFRYFNSELIDGLFKLGQSTKVLDLAIEYECEYYTVNAAKTNIRRYNTDAYYNKFAADSNIISSHRSLHDPQVNAVKSAEFTYDLLMASRAEEFNPEIVREIFVKYGLKPNSSRNLYNRINDNLNLFYYIEDYLDEYREEGRFIYGTKEYKILKELRSLPLMVVLTQLTRKNDSGYILNSNLELVKG*
Ga0111420_100019	Ga0111420_100019128	F099453	MLRRKDMNRFDVIELAQQTLTFVYDTFNGKVNTLDPYTRLNFVSGYLDTKTNIARTTPYGCIYVSLEAFADTVERQGFIDTDQIRNLALEIIIHELTHVDQLIDYKYIKFNNGYREEVELKCIKQSCQWILDNIQYIRSLGLVVIPEVYQARLANLGNIIYTPKYPIAIAMAKLEYMLGKKFREFSNNNIEIQYIDRLKTHYSFMVCENRSYINSRNLNDLGERLLNDKQYAVEYLEYGNSKLVIKITQGA*
Ga0111420_100019	Ga0111420_100019130	F080166	VNILANFENYNKVVEQIFELNYYLTFKLEVTFNTTHKKINTEIKENFHSEYVVGANKLTTNLRYKYQMRLSPRGEKIGIVIDWDNYDDLCTVIEEAINICDPENKMSPFKRLYSTTGDLLDIKCNSLKVRYLHLEDRWNNKVDLIPFVLVDDNRGTLTEAMRFRFNNDLTFDVPVSRLKGFRRFLMTYNPVLHAGAMARYMAMTPLLGSNRQNMLK*
Ga0111420_100019	Ga0111420_100019131	F081455	MENFLTKEISALISKHFEFTNNSDLIKDPIISDDNIIDFPPVEEIGAEKVNMSDIIDCVQEALQQPLENKDTSIAVNFSQMINKPKEEVKTEVNSVPPEGETKVNVLFPKTEHILGNYVDYDSFIKIKESNTDKVVRAIRLLNYKMSDQNAAAAFAQFVSEFNPECDPNKRLRYELIRHQGREKDLVIRLSTVINGTTKYYADIYPDLNKIDLDHHLISSAKK*
Ga0111420_100019	Ga0111420_10001915	F099452	MDKTYAELLQETLSKIYELKDLNNRDRGKALTIFIGERLNRELLLSSMNVFNLYKEIVNLDDVSLLNDLRKTSWYKDWFISDKRNSDLIDLSKFNFRSLERFEKESYLKDVEHYDFKKVIEVDSYSLYDTLSEENGVDLFKLAAENILINHGFFNNTDYNLYDIPDKYMEDIEVSLYMCLLNSGNMDFMDKKTFKSTELFYIVKNNICGTIFFTLFDRMNEDTRTRAR*
Ga0111420_100019	Ga0111420_100019161	F095631	MASDAVSVNKTLRSYQETVLNTVQNDTLLNANIYDIHQYIENIKKRYVDEDEITLSMGIFGYMGDVNSNALQNAVTMAAEYSNEAIPIKAKFEKNVISHALMLGINKIFAEPATMQAMFVFYEDELILNTVSDTFKFDRNIKIMVGDYEFHLPYDLIIKRIELPTGEYIYTGMYDTTQSNPIITRNSNDVDPYLKPTVRSKIDGRNVVMLLVDLRQYEYTTYHKTIITTNPLESKMLQFEFDNQLAGFDVDVKEYDQPTRKLKPVYNGLNTDGINNFCNYTYIDSSTIRVMFDNSSYLPTANTEVTVNLYTCQGSNGNISYKDSIYFRVKSEKINYDRLNLLVIPTSDAQYGIDKRSIADLKKLIPKEALSRGSVTNSTDINNYFNTIDDDDNKLFFFKKMDNPLARLYYAFVLMDSPTNIIPTNTIPIEAIRRDFDNISDSNYILTAGNIIKYDGTTNASVAYQSSEEELNNARRNQFLYMNPFMCIVNKKPLYVSYYMNIMDVNKLLEFTYVNQDSKVQFVANKMNWYRHYLSERDTYVGDISIMQNIQSDIGLVHRDDPYDPEKITGVDVKVLAVFYTDEKYQVPYRWAEAEFVNYDQNTFIMDYKFKLNTDNKIDKNIKLKINNVYEVGNATRLSPGYMTNNMNMKIFVFAKDVFGYNAGLHKADQIFTADFLEGYSLTNEYTVKYGIDFLYNYSDLIESHIKIRKQDNGQISYIIDRVPVISYDYVNTEERIQDFINNLEKKRIHILECLDVLEDSFGIDIKFFNTYGPSKLFYVNDGVPLNRVNLSMTFKVKFLTTTDKYLTEYIKNDIRKYIEDKSRISDIHIPNIITFITQKYAENVTYFEFLDFNGYGPGYQHIYRKDESIVGRIPEFLNINTIGTENNALDINIIIA*
Ga0111420_100019	Ga0111420_100019198	F089057	MINVIPLIAKKYNRKGDTSGSLKSLIDDLNCIGDTDDVLLFLTSIPRETKYSLAEAFSVIVSNDEYRNIFRTSIVFLNIDLDYHELLLTAIKSESYDIICMINKAIPTPDLFLAKNNYECLTIALDKLYAIFDKVLGMVVGQIKHTASSKEGRALGIFMTLCILNKDIDKLASLCTGYLATCRSEYMVKDLMNKSAMDAFQYMSEEDIHTVVDDINSRTVLSRYLNNM*
Ga0111420_100019	Ga0111420_10001962	F092232	MNTQAKFIAEYNDKNRPKFNDKFFNKSDDDIIEDLKDVILSCERNKFYTIKVLNFEVIDDYNEVQKLLIGDETPSISIKDSDLKILKVTYHVACTKDEDTFDVLIAIPRVIDGAYIHLNGNDYFPLFQLVDGSTYNNTTASSAKTQSITLKTNSNAVKMLRNFIDLNTTNEETVRAAMFSVYLFDHKVTLFEYYLARFGWYETLDKFNFEDVIKISDHDLNDPEYYTFAIANAHMKTPFYISAVKSFMDNDRILQSFVASFARAISLYATKKTTLDQIYTTEFWICKLGYNFVSSETSVFTKGNAIIESLENSYDIPTKKRLRLPDHVKEDIYSVLKWMACEFSSIRLKNNLDASSKRIRWSEYIAAMYIMLINVKLRRLPEKHDPNMEAYRIKQQLNTQPMALIAELQKSNLKGFRNMVNDRDSFLQLKYTIKGPSGPGESNSKNVARNVRAIDPSHLGIIDLNTSSASDPGVGGMLCPLNYGVYEWNSFTNEEEPNVWDENFSKMLNIYREEKGYTSAIMLADDAGLELTDTRDPTAVAFDADLLGQTIAKVARTRAFEKQLRPALINMEDSCSIYFEEV*
Ga0111420_100019	Ga0111420_10001981	F095629	MTFKERMMRELIICICLIGCFSIANANNIEQPKDVKIVHNDDSVILHKKIYQLEKRIERLEELLKKEDK*
Ga0111420_100019	Ga0111420_10001986	F105379	MVIHFPLSQSDIESLLSISKLLKCDKILYDRNYINPIIGVGPEKSYFQTTSFMVDLSPHINNLLVNISDLKNLDKITQLQPSKENPEIAIHRPVVSVFNWDAEYVKACMNSLREYQIDDNIIARTDEFHNTDCYNELMAGSASTGAFRINVGRYMIDIPKSAIPTLKSDHVVATVYNAPNKNFNILRFKITKRNGIIVNQSMLFLPY*
Ga0111420_100262	Ga0111420_10026239	F081510	MKFDLNAVKATAKTTWVTTKILGKKYAPVILLGAGLVGYGYSVYEGIKSGKKLEATKAKYEQMEADGEEFSRVDVVKDIAKDVAIPVAVATASTASIILGFAIQTNRLKAVSAALAMVTEEHARYRLRAKTVLDEETFKKIDAPLETKTVNVDGEDIEVESIVPNEGDFYGMWFKKSHKYASDSPEYNEGVIKEADNVLTEKMMRKGMLTFAEVLDILGFEVPKAALPFGWTDTDGFYIEWDAHEVWNDDKQEYEVQFYVRWKTPRNLYATTNFHDFVPKKTRKELN*
Ga0111420_101645	Ga0111420_1016456	F089055	LKVEKMNSTPECVTKTPEIEAREKLAAIFSDAERCDNSKVNPELGKTAIDIENTSRMNSADDGAVYLCNQALGSYGKSLDYINNSPLEAVQAIGNSLQLFREDKTKESCR*
Ga0111420_103435	Ga0111420_1034352	F078842	MIISSIYKTADNDGLIAHIYEHLLAQYVLKYLQDNEFFVLSDIILSAKTYGDTCFMDAELYSSEAKKTYDEALREFDKLVIPEDDILRAAGECGIEMNRNIVEVDRSELSKKLREVQISPWRKQIDMAYRKAHDESSVNMLFRTSYIKYSKESDDLFRECVLEYSIDESHIQTPVDQALAAIVMQIVALNFLTVVREKYTVYDRGDQWSEASISVGYRMFLGLLKKDDKIINQLSYDFLEYIKSLSSSVFCDNLQKALVRCSDNHKQVILNRSVLNAILGGCVIGGKGWLEMADDTRIRKMIDLIEIDIYEIDY*
Ga0111420_110908	Ga0111420_1109082	F080164	MVGLTLCAAPQVTLRERANAFPLITEKDATEVDAPYAWRLPVVPLSLDNREIRNFAKFPLLPSLSGGILTVRVLVVGDTVAVHRDLMDDFAKRCRATLGLGVRTAPKLFGIKGMHVYGVQKDKSRQAVDEYVTLHLPGFEKAEKPLHYKEQTGQLVLCEYYGSHRGDLLLNAANARPEIFGELCPVVDFHFPVELRRAYAWLLLEIELEDGTKLSTSLQHYDEQTSILDHPDRL*
Ga0111420_113969	Ga0111420_1139692	F085820	MRSTFYLFAVLFLATTFFSCETVEPSPRPTWGEIVNPIEAFMYPRDLKVFADGEEGRRWLILVVPDSTKSSFAPTSKSTPAEVARYKELSQLVGNPTEPVANECHFHRTWLTQGVKAIRVVRTHADGRDEDVTAQCGNLYFYTDKQIFDCQFKCGNRSIFAKPLGETVEADYLWLPGRDVFGLVAPLNPDHLKQRIVLRLADGTEIEKELSEKGKK*

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