Sample 3300008921

3300008921: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NB1

Overview

Basic Information
IMG/M Taxon OID	3300008921 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117944 \| Gp0126075 \| Ga0103486
Sample Name	Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NB1
Sequencing Status	Permanent Draft
Sequencing Center	Sodertorn University
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	48300647
Sequencing Scaffolds	30
Novel Protein Genes	38
Associated Families	31

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	9
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	3
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	4
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium TMED67	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Altibacter/Constantimarinum group → Altibacter → unclassified Altibacter → Altibacter sp.	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1
All Organisms → cellular organisms → Eukaryota → Haptista → Centroplasthelida → Panacanthocystida → Acanthocystida → Marophrys → unclassified Marophrys → Marophrys sp. SRT127	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	1
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water → Microbial Communities Of Nutrient Treated Water From Blanes Bay, Barcelona, Spain

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → bay → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Barcelona, Spain
Coordinates	Lat. (^o)	41.666	Long. (^o)	2.8	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000055	Metagenome / Metatranscriptome	3096	Y
F000088	Metagenome / Metatranscriptome	2436	Y
F000237	Metagenome / Metatranscriptome	1498	Y
F001583	Metagenome / Metatranscriptome	668	Y
F001926	Metagenome / Metatranscriptome	616	Y
F003081	Metagenome / Metatranscriptome	508	Y
F004023	Metagenome / Metatranscriptome	456	Y
F011139	Metagenome / Metatranscriptome	294	Y
F013645	Metagenome / Metatranscriptome	269	Y
F015096	Metagenome / Metatranscriptome	257	Y
F021302	Metagenome / Metatranscriptome	219	Y
F022892	Metagenome / Metatranscriptome	212	Y
F023607	Metagenome / Metatranscriptome	209	Y
F030104	Metagenome / Metatranscriptome	186	Y
F034583	Metagenome / Metatranscriptome	174	N
F039653	Metagenome / Metatranscriptome	163	Y
F040120	Metagenome / Metatranscriptome	162	Y
F045106	Metagenome / Metatranscriptome	153	N
F047079	Metagenome / Metatranscriptome	150	Y
F048330	Metagenome / Metatranscriptome	148	Y
F056640	Metagenome / Metatranscriptome	137	Y
F057413	Metagenome / Metatranscriptome	136	Y
F060358	Metagenome / Metatranscriptome	133	N
F060807	Metagenome / Metatranscriptome	132	N
F063711	Metagenome / Metatranscriptome	129	Y
F065801	Metagenome / Metatranscriptome	127	N
F074917	Metagenome / Metatranscriptome	119	N
F076148	Metagenome / Metatranscriptome	118	Y
F090440	Metagenome / Metatranscriptome	108	N
F099286	Metagenome / Metatranscriptome	103	N
F103885	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0103486_1000046	Not Available	10850	Open in IMG/M
Ga0103486_1000104	Not Available	7962	Open in IMG/M
Ga0103486_1000176	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter	6464	Open in IMG/M
Ga0103486_1000233	All Organisms → cellular organisms → Bacteria	5737	Open in IMG/M
Ga0103486_1000291	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter	5264	Open in IMG/M
Ga0103486_1002999	Not Available	1292	Open in IMG/M
Ga0103486_1003054	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1275	Open in IMG/M
Ga0103486_1003118	Not Available	1260	Open in IMG/M
Ga0103486_1003388	All Organisms → Viruses → Predicted Viral	1188	Open in IMG/M
Ga0103486_1003703	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1121	Open in IMG/M
Ga0103486_1003880	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	1090	Open in IMG/M
Ga0103486_1004816	Not Available	952	Open in IMG/M
Ga0103486_1005090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium TMED67	918	Open in IMG/M
Ga0103486_1005120	Not Available	916	Open in IMG/M
Ga0103486_1005510	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	876	Open in IMG/M
Ga0103486_1006047	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Altibacter/Constantimarinum group → Altibacter → unclassified Altibacter → Altibacter sp.	827	Open in IMG/M
Ga0103486_1006081	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	824	Open in IMG/M
Ga0103486_1006226	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	812	Open in IMG/M
Ga0103486_1006458	Not Available	796	Open in IMG/M
Ga0103486_1006548	Not Available	789	Open in IMG/M
Ga0103486_1008115	All Organisms → cellular organisms → Eukaryota → Haptista → Centroplasthelida → Panacanthocystida → Acanthocystida → Marophrys → unclassified Marophrys → Marophrys sp. SRT127	693	Open in IMG/M
Ga0103486_1008223	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	687	Open in IMG/M
Ga0103486_1008414	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium	677	Open in IMG/M
Ga0103486_1009127	All Organisms → cellular organisms → Eukaryota	645	Open in IMG/M
Ga0103486_1009281	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	638	Open in IMG/M
Ga0103486_1009575	Not Available	627	Open in IMG/M
Ga0103486_1009796	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	619	Open in IMG/M
Ga0103486_1011455	All Organisms → cellular organisms → Eukaryota → Sar	563	Open in IMG/M
Ga0103486_1012597	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	531	Open in IMG/M
Ga0103486_1013726	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103486_1000046	Ga0103486_100004618	F103885	MNNLLQSIKPKYIKLINESDYKFTSTKILAKLESSKFYGDLTISEIRDIYDMCNINALRVSAWDYRFGDNLLIDEND*
Ga0103486_1000046	Ga0103486_100004628	F045106	MKPKNVLFIEEFIEILGGDNFFLCDSIHQEQLFTMQDKLAKLIADHANNGTSVARHLVPLLPNTFNVE*
Ga0103486_1000046	Ga0103486_10000469	F021302	MRTLIQKFKKNRRKAKHVKFLHLKIAELHGEIIAESFKGEFQLNKGITIIHSNVENKAKLLKKYNRRLKLIVY*
Ga0103486_1000104	Ga0103486_10001044	F040120	MARSRINSPSKDIMKDNGSVLVSIIEGEQVHLDITLGWLTNLTGYTITPKIVEGDMSELDSDGYPTLVKSGGQVTTLPIIDSDVTDNTFKIVIPEDLIALWTTQPTPEKPSYGWIGLEVADMASGNSQQIWKPMRGLVEVLFSPSEEV*
Ga0103486_1000176	Ga0103486_10001761	F099286	MFQNLKINSHIVLVLCLFFFNCNKNNSCEFLDDHNQLLKPVVLKKFEDDVLKVFKNAGLEVTINAFLINEELDSVSKNYYTANLISNYSNQSMSQYSSAFLEIYCDSIARIRSKPVSRFEFEELYNQSVD*
Ga0103486_1000233	Ga0103486_10002336	F060358	MDEDLKTVVASVRLFIDNVLYDMKNVSKTTTKPVILAHIDAWKNELETIKQFTNT*
Ga0103486_1000291	Ga0103486_10002916	F065801	MSNQEKKERKRKSIELMESIKVKVWKKNQVFNEISSFEWVELITFY*
Ga0103486_1000729	Ga0103486_10007294	F056640	MNGFSKTFFLICYDYFELFFANSITDLNLLREIYFYNNSFEFFLINLMLFYGIVSTVLTCFMIKRIFSFLNVSQYLNYKMLYHINATYFIRNQNFIKQQAVSTGTGVVKKKYNKI
Ga0103486_1002999	Ga0103486_10029991	F001926	VRHEDIPDNNNPKIRKAVLEGDKLMKEVLNGGYNVHPVPPPNSETKERTTKTTERKRSKMEKLFTLGYTTSGDP*
Ga0103486_1003054	Ga0103486_10030542	F057413	VLVGYTVHFFSGNTDLRQMGGAYLYSFDIAALLFGCCFNLAGLPYSAGFLGKEFLLLQVLRDDFLSLFIRGC*
Ga0103486_1003118	Ga0103486_10031181	F001926	VRHEDIPDNNNPKIRKAVLEGDKLMKEVLNGGYNVHPVPPPNSETKERSARKYERKRTKIEKLFTLGYTTSGDP*
Ga0103486_1003308	Ga0103486_10033081	F000237	VLIGKNNIISFISKIKNRLKKIYLKNYVTAESDGLLGGYAFFFHYIVALGISLSATHLSDLTLTIIANIFSVFNFAYKTYYVIFTNKHLNTDQLTRLMMFHYFTPWYYLYLVKLHALFCHESDSDSGENVYEDKSGTYVSFYDAFLKEIQDAYTLYVFVYFFIHHFDASTVNYHFFERNISELDEIRFYGVAPHYFRPLMGLLVVSPSHYEGLMMGLFVLLASLPIIYNLYNSNNNYLSIIPMQSSMLQTLFFILFMLSMYCTASMLPCGRYYYAPEGGYVGNPVKFSYQYAYLYMAWFLHHLDLIEHYGFQYVNHMLLKHSNIKKAIKARSLKLGYRVPIKHIKKKKHQTISESYFFIRSLSQKKFF
Ga0103486_1003388	Ga0103486_10033881	F011139	MGILVISPTHYEGLMWMGLWFVLLAALPVIYNCYNVFHKYVSAIPMQNSLLQTSFFVFFMMSLYCTASMLPCGRYYYDPEGGYVGNP*
Ga0103486_1003388	Ga0103486_10033883	F003081	EPGLVVELREEMFNDTRFGAEVFYMHVRGVDTLMVLSYMHIMKKIYLKNYVTSESDG*
Ga0103486_1003703	Ga0103486_10037032	F011139	GLFLALLATLPVIYNCYNSNNTYLPVIPMQSSLFQTLSFMFFMMSLYCVASMLPCGRYYYEPEGGYVGNP*
Ga0103486_1003880	Ga0103486_10038802	F030104	MAFDDSQEEVIEFMDTAFFYFFTTMILYLGYKYSIHYFAFLDASIAEGRSVGFMVKQLFKDFLNSLSILLRFYILLFRINVYDTLDDFFDSYYIFLGDFDEDEYLNELFLSIHGTLLFLPENGFDTSFLQEDETDFSKDLFYIYFIV*
Ga0103486_1004352	Ga0103486_10043521	F000237	LLGGYAFFFHIIVFFGISLSATHLSDLTLTIGANIFSLFNFTHKTYYIIFTNKHLNTDQLTRLMLFHYFTPWYYLYLVKLHSLFCHESWDTDSGEGVIEDKSATYISFYDAMLKEFQDAYWTLFVFIYFIEHHACPATVNYHFFERNIAELDEIRFYGVAPHWYFRPLMGLLVVSPSHYEGLMMALWFLLLAALPIIYNFYNPSTSYLSQTPMQYSLIQTSAFLTFMLSMYCASSMLPCGRYYYDPEGGYVGNPVKFSYQYAYLYMMFLHHLDSIEHFTFRLLQAFTLKSGFNKLWYEKVTFENKAADDWGTDFNVRPHPRTVARDFI*
Ga0103486_1004719	Ga0103486_10047191	F001583	MFTNKHLNVDQLTRFMVLHYFTPYYLYLVKLHVLFCHESDTDSGETTYEDKSGSYVSWFYDAFLKEIQDAWYWVIFVFTYFFMHHFDGGTVNYFFFERNISELDEVRFYGVAPHWYFRPFMGVLTISPTHYEGLMWFALLILLAFLPVINTFYNPYNRYLSVIPMQNSLLQSIFFLYYLWLRYIVLLVCYPVVVTIMNLKVGMSVTPELNSLTSTVTYT*
Ga0103486_1004816	Ga0103486_10048161	F047079	PLEQFSINKFIPIFIGTLDFSIKNSSVLVIVSCTVCYLFFNFACANATLIPSV*
Ga0103486_1005090	Ga0103486_10050902	F023607	MHIYKLVFDTEQQGKQVLIDNNVWEEVTEEGVTTLRYINGTKGVVYIGKVIKTQGTYDPDGHEITPPIYYDGVAYDVISTDELDLEQYRVYPNGSAAHMFYGYKRDDDT*
Ga0103486_1005120	Ga0103486_10051201	F074917	MRFAETKRQKPTSFLTTKAKNKLDTIRQNPINQQKKQCGDRCHYKHSQCSSAGFTPRRPGNPVDFLTDLSNKLCGRHFSHRYLPIQVLINHDMTINTLRFSWVFDQANGQHLLRSILAIFTVKGW*
Ga0103486_1005510	Ga0103486_10055101	F011139	MGLFFGLLAFMPVIYNCYNVFHKYVATIPMQNSLLQTSTFIFFMMSLYCTASMLPCGRYYYDPEGGYVGNP*
Ga0103486_1006047	Ga0103486_10060472	F063711	RNSNILNMDAIIKDSQEYWLNCLAEYELALQEEFLMQEGKGFNDNMIQMLKFEIEECIKQLA*
Ga0103486_1006081	Ga0103486_10060812	F011139	MGLYFVLLITLPIVYNFYNTFHKYIATIPMQNSILQTTVFIIFMLSLYCTASMLPAGRYYYEPEGGYVGNP*
Ga0103486_1006226	Ga0103486_10062263	F048330	YNRFIVLVDNSIEISNINLTPRDLIDTHHIITLIMKSKKIR*
Ga0103486_1006458	Ga0103486_10064581	F015096	MNYGTQWLARRKELEDKYVELMLAKYPLLTDVTTDIQRKNGTRMFELNHKKYGPTRFATYKSGMVRKIIRTRFGELSCYQLNPQRINTRYYMTLSDNSELNVKSYEGKQRVGITNGLARLVYLEKYLIKNYDLDSVQDVIEVDGVLYK
Ga0103486_1006548	Ga0103486_10065482	F060807	MFGLGSQYRGVLGQVQETLAKQEQEQYRANASVGDPFFKPGVERIKPEQKTDSASYGNKSIFSPRQNSYGDYIFGNQEERQRSMPVRGNVEGPLAMKDQNGDGKITQGDVIKARVEGYKK
Ga0103486_1008115	Ga0103486_10081151	F034583	RPFVVCESSVSLLLFFWTLIFLFVYILVPLIKLRFVIVSEKNSSHELEKTCTPFYGNTFKFNDTIV*
Ga0103486_1008223	Ga0103486_10082231	F039653	VKFAFFGLLKCLLTISLEPTFYIIYPFLTVGIFDAVFKLLYQIDLKKLVAYSTVVEMH*
Ga0103486_1008414	Ga0103486_10084141	F076148	FIMKYTLAVAALLGLASIETTNAITIFSNRGDKLYVEVSSSSDSSSSDDDAENIQLGDDEEVDHSNEFFLPGQHEMLGGGGYERVTPARFAADTDDIFMRSMIEQYALEQKNKDGTPSGKFWMDEAATRAAAREVLETNCGVKAAARDSWLNTYFGKAWNHFDVNRTGKVEVIKMPQLMRFLCSDQQMYLW*
Ga0103486_1009127	Ga0103486_10091271	F022892	KINPLANNIGVFITIEPPNIVAIQLKILIPVGTAIIIVALVK*
Ga0103486_1009189	Ga0103486_10091891	F000055	MKFAQIFAVAALLAVADVNAVSLDRKKKKDEPVPTAADTPSSGYFGADEDDVFNNIFNHYAVPIMNAAGVPTGQKVLYRDNAEKACAEILLVSKQVSEAKMESYISEFFPRTWAKFDVNNSGEIDITESHTFMRSLLGRLNQFVLAPGSLTDIKVE*
Ga0103486_1009281	Ga0103486_10092812	F011139	MGLYFGLLLLLPIIYNLYNTFHKYVATIPMQNSILQTSVFIIFMLSLYCVASMLPCGRYYYEPEGGYVGNP*
Ga0103486_1009575	Ga0103486_10095751	F090440	GGICTCEISGLKLATDLRLKRIYHCRITDVGEGHDLRIIIHKSIGG*
Ga0103486_1009796	Ga0103486_10097961	F000088	GIIAVACLLGYTEAATVAQKSSFAPPALGPYASDTDHLSAECYGGDEDDIMYDVFERYRVEERNPVGAGTGIWKLPKASGPQWAADIVRRFHVMDDDKVNSYVAANFDNFWKKYDNNGTGEIYESEGEVFMRALLGPNNRFRLAPGALSDMDSASLHVQNEFSATPDLLPYRHRYELALQNYPDGRPAVECAA*
Ga0103486_1011455	Ga0103486_10114552	F013645	MKTEVNKIMNPAFLLGTAFNIAYWHRKYHSGTICKGVSNAQASNALSGCEREEIPK*
Ga0103486_1012597	Ga0103486_10125971	F004023	HLFRKLYLNVFEYEHEAAKSGVFSFLVFQVVVFCGLVLCCTHLSEITLTIAANILHTFFFFYGKFYVFTDKSLNSDTIIRLAYAHYLSAFYLFYIALLHGIDIHYDKNETSYDGLEAEMIFDEALSNELANTIDVLTIIAIACFLYAEPEALTYEIFM*GDVGLSPDVRF
Ga0103486_1013726	Ga0103486_10137261	F039653	GVLVKFAFFGLLKCLLTLQLEPTFIYVYPFLVVGISDAVFKLFYQIDLKKLVAYSTVVEMH*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300008921: Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NB1

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences