Sample 3300009577

Basic Information
IMG/M Taxon OID	3300009577 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0127568 \| Ga0105230
Sample Name	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3750_2500
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3750_2500

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	28921175
Sequencing Scaffolds	35
Novel Protein Genes	41
Associated Families	41

Dataset Contents

Total Genome Size

28921175

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Mammalia → Theria → Eutheria → Boreoeutheria → Euarchontoglires → Primates → Haplorrhini → Simiiformes	1
Not Available	28
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Mammalia → Theria → Eutheria → Boreoeutheria → Euarchontoglires → Primates → Haplorrhini → Simiiformes

Not Available

All Organisms → Viruses → Predicted Viral

All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium

All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Ecosystem Assignment (GOLD)

Name

Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Type

Environmental

Taxonomy

Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

marine biome → marine water body → sea water

Earth Microbiome Project Ontology (EMPO)

Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	8.2514	Long. (^o)	-49.9993	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Southern Atlantic ocean

Coordinates

Lat. (^o)

8.2514

Long. (^o)

-49.9993

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000060	Metagenome / Metatranscriptome	2944	Y
F000161	Metagenome / Metatranscriptome	1845	Y
F000904	Metagenome / Metatranscriptome	843	Y
F001135	Metagenome / Metatranscriptome	767	Y
F001383	Metagenome / Metatranscriptome	709	Y
F001487	Metagenome	686	Y
F002030	Metagenome	601	Y
F002150	Metagenome	589	Y
F002274	Metagenome / Metatranscriptome	576	Y
F003270	Metagenome	496	Y
F003761	Metagenome / Metatranscriptome	470	Y
F004794	Metagenome / Metatranscriptome	423	Y
F007755	Metagenome / Metatranscriptome	345	Y
F008691	Metagenome / Metatranscriptome	329	Y
F009367	Metagenome / Metatranscriptome	319	Y
F010690	Metagenome / Metatranscriptome	300	Y
F011673	Metagenome	288	Y
F013312	Metagenome	272	Y
F016014	Metagenome / Metatranscriptome	250	Y
F017046	Metagenome / Metatranscriptome	243	Y
F025299	Metagenome / Metatranscriptome	202	N
F026289	Metagenome	198	Y
F027204	Metagenome	195	N
F027540	Metagenome / Metatranscriptome	194	Y
F029903	Metagenome	187	N
F030781	Metagenome / Metatranscriptome	184	N
F034594	Metagenome	174	Y
F040137	Metagenome	162	Y
F040146	Metagenome	162	N
F045147	Metagenome	153	N
F045157	Metagenome / Metatranscriptome	153	Y
F050480	Metagenome	145	Y
F054156	Metagenome / Metatranscriptome	140	N
F054779	Metagenome	139	N
F057437	Metagenome / Metatranscriptome	136	Y
F064624	Metagenome	128	Y
F068931	Metagenome / Metatranscriptome	124	Y
F074138	Metagenome	120	N
F077781	Metagenome / Metatranscriptome	117	N
F097130	Metagenome	104	N
F101842	Metagenome / Metatranscriptome	102	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0105230_103911	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Mammalia → Theria → Eutheria → Boreoeutheria → Euarchontoglires → Primates → Haplorrhini → Simiiformes	1405	Open in IMG/M
Ga0105230_104708	Not Available	1215	Open in IMG/M
Ga0105230_105482	All Organisms → Viruses → Predicted Viral	1086	Open in IMG/M
Ga0105230_106727	Not Available	931	Open in IMG/M
Ga0105230_107975	Not Available	812	Open in IMG/M
Ga0105230_108930	Not Available	742	Open in IMG/M
Ga0105230_109015	Not Available	736	Open in IMG/M
Ga0105230_109050	Not Available	734	Open in IMG/M
Ga0105230_109072	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	734	Open in IMG/M
Ga0105230_110268	Not Available	663	Open in IMG/M
Ga0105230_110284	Not Available	662	Open in IMG/M
Ga0105230_110475	Not Available	653	Open in IMG/M
Ga0105230_110873	Not Available	633	Open in IMG/M
Ga0105230_110894	Not Available	632	Open in IMG/M
Ga0105230_111480	Not Available	606	Open in IMG/M
Ga0105230_111670	Not Available	599	Open in IMG/M
Ga0105230_111815	Not Available	594	Open in IMG/M
Ga0105230_112062	Not Available	584	Open in IMG/M
Ga0105230_112343	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	574	Open in IMG/M
Ga0105230_112719	Not Available	560	Open in IMG/M
Ga0105230_112838	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.	556	Open in IMG/M
Ga0105230_112846	Not Available	556	Open in IMG/M
Ga0105230_112898	Not Available	554	Open in IMG/M
Ga0105230_113248	Not Available	542	Open in IMG/M
Ga0105230_113433	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
Ga0105230_113783	Not Available	525	Open in IMG/M
Ga0105230_113830	Not Available	524	Open in IMG/M
Ga0105230_114006	Not Available	518	Open in IMG/M
Ga0105230_114091	Not Available	516	Open in IMG/M
Ga0105230_114303	Not Available	511	Open in IMG/M
Ga0105230_114491	Not Available	506	Open in IMG/M
Ga0105230_114504	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	505	Open in IMG/M
Ga0105230_114560	Not Available	504	Open in IMG/M
Ga0105230_114666	Not Available	501	Open in IMG/M
Ga0105230_114691	Not Available	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0105230_103911	Ga0105230_1039111	F077781	AHLKAPAAVTGGWGSPRQNDFFILLTLESPAPCDPLQTESHLVFRTRIHSQVQWGDVRGVAGRTKDSLPSDSVCTVGPRAGALSVRTADSLYLGFPRPHPGTPGLGRFWPFLALQSLSETPSHARMPRVTVARTSPETLEISPLRAAT*
Ga0105230_104708	Ga0105230_1047081	F045147	VNTDSGTGIYQTGIIPLFCYFGAAVPKTWTTSSVLLHIHADLAHAFPIFRDEDNMNMIDTGIGL*
Ga0105230_104708	Ga0105230_1047082	F025299	MIIEEIPFFVEFIITGIVLGFGYGFTKLFLNHAKDKNKIRRSERKAKESNGLEDELDSYINNAPQIAQKIQAELTYLKENNATPEQMKSLESKLELLNKVQQYEPLIKMIGKPALKKIMSIIDRV*
Ga0105230_104708	Ga0105230_1047083	F002150	LVSLTAAKIGVGVARKGKKEVGDLYQRKLGYDFVNLVTKLVLFYSIAFLIAKYMEAVIYFQGGLSTIAGFFGIKMAQADQLPRQWVELFVDTNQQTYSSTPTGAGQFNPPGWDKPYDYGTPEHQQAEPYLFPQKEVKYKFWDLINAIVVFYIGWEAYKYYDNANKDPDKKVDFLTLAIFSLLMLAVGVLSFSKFLGRFSFNRFQEENK*
Ga0105230_105482	Ga0105230_1054821	F045157	SGIAKSSASSGREGIRNKISRLKKTGHIREAQSALMDMINLKSQTTRK*
Ga0105230_106727	Ga0105230_1067272	F068931	MSFRPALIKPVYDVSNFGTGVTLPLNCLSGSTTTLTPSTATFVQVLEDSKVPIDEVDMFITDSDKMAGIYPSNDTDFDYMALGC*
Ga0105230_106727	Ga0105230_1067273	F010690	LEAYECNTGLQEGATSQFILSGQSQIAPTVATNLACALHYSTTPPNRPEHFYHKPDDESNFTTATTTTGNSFTINDGMWVEDLYVSVFTAVYTESQSLTGYGTFSSNDFGNSLPLKVPMQPGAAALGATGTQGIMKLAAYHNTHMPMKTSCKITTAFTNDINQTGTTSFILGVGYTKQ*
Ga0105230_107975	Ga0105230_1079752	F003761	LAAIVELNTTEIWSHEPCWYIGEFNQSAPDSQSVRRSQTITVIRNDKRVKLTRDLGDARLFGEEFQLICGAPDEKGGGEAMYTVGEALQMAQDMNNMPPPKTEVRPKDWNKIFWENIEERNLWKRGASTFGPMHRKQRNT*
Ga0105230_108048	Ga0105230_1080481	F000060	MAQKLNTEFNYRYQVIGDTPWERIKTLKGFLEGRIRALALEEVSKLKHQAKLSKLNYLKNGGEGLEHEILELKAEILEADSQQGSLEEAFELTHDEIKILKKLIKELYVLAEPTRIKGYTDEQMFEANAANEFTVNMGREIQSEMIANGRPSAARIRNAMSNPHTWNALKQIGLIPKQTKILEGNVSPQLKIELKGVEDETV*
Ga0105230_108930	Ga0105230_1089302	F002030	MIEVLVFGLVALSVICLWLLIEGRKSPKFLIWFIPLLLILVSSTYETYTSILGFPRVSTPQKGLYLKHFIDEPNWIYLWVLGDGNVPMSYQIIYSRETHNSLEGVSGKSEEGKFMVLGVDESEMDGNEEGEEGEDSGGGFTIGGDMSFYEWDFETNLPSKNVRQ
Ga0105230_109015	Ga0105230_1090151	F030781	AFTSTYTVSQSLTGYGSFSSNDFGNSLPLKVPIQPGCASLGATGTQATLALASYHNTHMPMKTSCKINTAFTNDIISTGNTSFIMGVGYTKQ*
Ga0105230_109015	Ga0105230_1090152	F027540	MSFRSEPGFKPALIKPTYDVANFGHDSTLPLNCLSGSNTVTLTPSSATFVQVLEDSRVPIDEVDLFITDSDKMEMVHAGNDTDADFSWEWTPDMSAQAYQISLNFAVGMKVSAYTSGNFKISDVQVIIKQVGGGEGDFVYLNKIID
Ga0105230_109050	Ga0105230_1090502	F011673	MNNQQSKVLPIYLQPRILAAVSFIHRSPNKEIGLERINKVSRKLSDREMMYVLSLLVFDNILDMVRDSDEFKNYVSTKRTIN*
Ga0105230_109072	Ga0105230_1090722	F040146	MTLDKMTINKKGQPLAKRVKMKNGGGVGIQTHGNKLAKALNTKRPDQSLFQNEDGYLTGGIPIRS*
Ga0105230_110268	Ga0105230_1102682	F034594	VELFVDTNQQTYSATPTSTTQEGREFNPPGWDKPYDYGSVQHQEAEPYMFPQKEVKYKFWDLINAIVIFYIGWEAYKYYDNASKDPNKKVDLLTLAIFSLLMLAVGVLSFSKFLGRFSFNRFQEENK*
Ga0105230_110284	Ga0105230_1102841	F097130	AYKYYRNGGRDFLTMAIFSLMGLMVGVLSFSKFLGKFSLNRFQEENK*
Ga0105230_110475	Ga0105230_1104751	F064624	DTGSGQQSGPGRGFLDAQDVHGGVMTQQQPPVPVPVQLTVDDMTTLIQTDETSRLKVQGIALQRRVNELEAENAELKAQIAEPDTTTTNNKNDSKLTAVGAD*
Ga0105230_110873	Ga0105230_1108731	F003270	AANKLAAPVAFWSQLSQKDYEVLNASPQYHALDYIGKLKVAANILTGSLTGKVAFSDQYNPSPNGSPRINPAGIINKWVGIGLAGKIYSLVGKQMGLPEQAAIGRIGTKIIYGGAVGGFFDPPSAQGRVSTYAVTPNVMVQNRATTDRSYGVARRNRGFVPLDSFDYSTGSAFR*
Ga0105230_110894	Ga0105230_1108942	F001383	MKKFTIEVSHASPAQLTTIALDLKIMSNGWEKHGPRIVINGRQVQAPSLRIPGSGHKHGPRNGKPQATSHKLATFT*
Ga0105230_111133	Ga0105230_1111331	F016014	MNSILKAKEDAIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAHGKFVVDEATTSFIDGGVVNYDISNFMPNFIVSVPDKGQ
Ga0105230_111480	Ga0105230_1114803	F001487	MKKFTLEISHASAAQLLTIAAELKIMANSWEKFGPRIMINGQAVQPPKLRMAPTELS
Ga0105230_111670	Ga0105230_1116701	F004794	MSGSWDIATATSIGTGVAKTQINGGNNVTKPTQAVNLVEVVPYISSSGAMTVAQSLAVTLEIDSFSVDLLPKRIIVPPIQSGKGTIGNTVNPILEAYECNTGLQEGATSQFIISGQSQI
Ga0105230_111815	Ga0105230_1118151	F017046	MNKLKEIIKEGWDVFPPWLMALNIIAIFVGLFIIVFI*
Ga0105230_112062	Ga0105230_1120622	F027204	MRNDNKHWKKGIRVAKQFGGALAGRLGAAARPIAGALGYKKGERVYKKGGSAK*
Ga0105230_112343	Ga0105230_1123432	F002274	VLEDRIQINKEKNMAKTEVGYPEGGKKYKIEPGKVGQDPRADIVTNDFTPGQKIDKGTKVKVAGTRRMLASKNKTATWF*
Ga0105230_112719	Ga0105230_1127191	F009367	MKEVHSQLVDVVLLTQENGSTMLCRGGEDAVRRFWEIWPIVKAEFTGEKQLLQSIDANEIDQPYIPTTHM*
Ga0105230_112838	Ga0105230_1128382	F074138	MDWNQLYIHPSDDTTDDDIRDFVEWVSRKAERLGFRVELKRHQKIESTSSETVSYNPLDKSNEKH*
Ga0105230_112846	Ga0105230_1128462	F008691	MSSLAGYNVGEEATEVKKNLFENRDTFLMLVVAGVVGGAITRFIIPKSVTEGSVFSRLKSLFGYDQEEEEE*
Ga0105230_112898	Ga0105230_1128982	F101842	MMIESIIIAFSIREDMFLLVAMGALVVIGLRATKKVLDD*
Ga0105230_113248	Ga0105230_1132481	F050480	MKVEKEINGHLYITNDNLKRIADALEEILRLVKKDMEPRTKEKA*
Ga0105230_113433	Ga0105230_1134331	F000904	MDDHTKIYKEFYEHAMHLLNDHQKSPELVAGTMMAIAQRIYKTQLNDEEYREMMEVIKDAPVQPYN
Ga0105230_113783	Ga0105230_1137832	F026289	MNLMEEKKPKAKNEDEAFIDTLVKMLAESKQDLAWNEKFKAVVRKHFEI*
Ga0105230_113830	Ga0105230_1138302	F040137	MGGAARIFRRVFSPPSYTPPPAQTVAAAPAAKTTVSGATKMSKVRGQGSGVTGTIMTDATGIEEEANVSKTVLGGATTKKKKYKV*
Ga0105230_114006	Ga0105230_1140061	F001135	MTTIIYKDKKYKLPFVVKSHSTAMVKRTNGQSGQSIELPGFAACVYDYTMYMSATTEEKDRQTNQAPGFSDNQDDWQIVRNGLNFFRRYFAKEYMVQLD*
Ga0105230_114091	Ga0105230_1140911	F007755	LLKKIWNHELRKLVKHKFTITYETDGLPICPDAIHEQLDLAMVNIRKNFAAEYAKLPGLHRLRLEPCGDWFPEQQKPMRFKA*
Ga0105230_114303	Ga0105230_1143032	F054779	PRAIGEAIKMPSYNFSPIPDSLFVQDVSATAGGIGAGNIPGSARYAEGHVRLASLSETREGTDPTATLGTEWDVEDMIILRSRYEIVNFKAVEKTSTNASIDWTFYNRAPN*
Ga0105230_114491	Ga0105230_1144911	F029903	MAKGNFSPIPNSLEVHAVTSSATSLGSVPSAANYGEGYVRSYAVVETRDGTDPTTTKGKEWAAGDLIILRSKDELDGFKVIREN
Ga0105230_114504	Ga0105230_1145041	F054156	MLEALLFTGQIPEIDWEHGDDLCDCTFQRIGYWTNPYLARTLKIRLCCAWKVLAEQNPEIAALMQEIPAFDDYNRDCWVSEPAAWDSKEGDMPRALWHRQLSIQQEKPLE
Ga0105230_114560	Ga0105230_1145601	F013312	MLFVKGRNFTWVYNITCFPQVNQAYVVTILGLISSADNTTCNLFAVAAVTFIISLSATTSGAESSSDVPLADIALTLKRLKTALSVSVIVTVIVSAFPESSDTSIDLITAVVAVGTEYKVVADVLVKSTFLFTNVLAI
Ga0105230_114666	Ga0105230_1146662	F057437	LVAIPATILAKEIGKRGTKASGEFLEQKLGYNFIDLVTKLALFYVIAFMIAKYMEAIIYFQGGLSTIAGFFGIKMAQADQLPKQWVELFVDVNQQTYTSAPTG
Ga0105230_114691	Ga0105230_1146911	F000161	MKKFTIEVSQASPAQLSTIGLELKIMANGWEKHGPQIKINGQQVQAPRLRIEGSSDKLQAASDKPKKDHNQMI*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009577: Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3750_2500

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences