Sample 3300009724

3300009724: Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_245_18m (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300009724 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110190 \| Gp0141786 \| Ga0123380
Sample Name	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_245_18m (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	16488885
Sequencing Scaffolds	41
Novel Protein Genes	44
Associated Families	36

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota	10
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1
Not Available	16
All Organisms → Viruses → environmental samples → uncultured marine virus	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Goniodomataceae → Pyrodinium → Pyrodinium bahamense	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	2
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Microbial And Viral Regulation Of Community Carbon Cycling Across Diverse Low-Oxygen Zones
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Microbial And Viral Regulation Of Community Carbon Cycling Across Diverse Low-Oxygen Zones

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Louisana Shelf, Hypoxic Zone, Gulf of Mexico
Coordinates	Lat. (^o)	28.8679	Long. (^o)	-90.4764	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000048	Metagenome / Metatranscriptome	3365	Y
F000183	Metagenome / Metatranscriptome	1709	Y
F000491	Metatranscriptome	1079	Y
F000981	Metatranscriptome	814	Y
F001108	Metagenome / Metatranscriptome	775	Y
F001583	Metagenome / Metatranscriptome	668	Y
F001707	Metatranscriptome	648	N
F001926	Metagenome / Metatranscriptome	616	Y
F002029	Metatranscriptome	602	Y
F002556	Metagenome / Metatranscriptome	548	Y
F003081	Metagenome / Metatranscriptome	508	Y
F004023	Metagenome / Metatranscriptome	456	Y
F006551	Metagenome / Metatranscriptome	370	Y
F007004	Metagenome / Metatranscriptome	360	Y
F009987	Metagenome / Metatranscriptome	310	Y
F011190	Metagenome / Metatranscriptome	294	Y
F015413	Metagenome / Metatranscriptome	255	Y
F017832	Metagenome / Metatranscriptome	238	Y
F019659	Metatranscriptome	228	Y
F028521	Metagenome / Metatranscriptome	191	N
F030135	Metagenome / Metatranscriptome	186	Y
F036714	Metatranscriptome	169	Y
F042166	Metagenome / Metatranscriptome	158	Y
F044287	Metatranscriptome	154	N
F045528	Metagenome / Metatranscriptome	152	N
F052646	Metagenome / Metatranscriptome	142	Y
F060086	Metagenome / Metatranscriptome	133	Y
F065809	Metatranscriptome	127	N
F067819	Metagenome / Metatranscriptome	125	N
F068117	Metagenome / Metatranscriptome	125	N
F090416	Metagenome / Metatranscriptome	108	N
F091427	Metagenome / Metatranscriptome	107	Y
F097448	Metatranscriptome	104	Y
F097458	Metagenome / Metatranscriptome	104	Y
F101069	Metagenome / Metatranscriptome	102	N
F101917	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0123380_100667	All Organisms → cellular organisms → Eukaryota	895	Open in IMG/M
Ga0123380_102427	All Organisms → cellular organisms → Eukaryota	859	Open in IMG/M
Ga0123380_103332	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	512	Open in IMG/M
Ga0123380_104346	All Organisms → cellular organisms → Eukaryota	638	Open in IMG/M
Ga0123380_106215	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	812	Open in IMG/M
Ga0123380_107290	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	605	Open in IMG/M
Ga0123380_107489	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	533	Open in IMG/M
Ga0123380_108032	All Organisms → cellular organisms → Eukaryota	608	Open in IMG/M
Ga0123380_108383	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	736	Open in IMG/M
Ga0123380_108910	Not Available	599	Open in IMG/M
Ga0123380_108991	All Organisms → Viruses → environmental samples → uncultured marine virus	562	Open in IMG/M
Ga0123380_109099	Not Available	1404	Open in IMG/M
Ga0123380_109561	Not Available	680	Open in IMG/M
Ga0123380_110211	Not Available	634	Open in IMG/M
Ga0123380_112176	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Goniodomataceae → Pyrodinium → Pyrodinium bahamense	808	Open in IMG/M
Ga0123380_113757	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	686	Open in IMG/M
Ga0123380_113799	All Organisms → Viruses → Predicted Viral	1565	Open in IMG/M
Ga0123380_113819	Not Available	920	Open in IMG/M
Ga0123380_114208	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1964	Open in IMG/M
Ga0123380_115080	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	504	Open in IMG/M
Ga0123380_116419	Not Available	531	Open in IMG/M
Ga0123380_116549	Not Available	757	Open in IMG/M
Ga0123380_116932	Not Available	521	Open in IMG/M
Ga0123380_116945	All Organisms → cellular organisms → Eukaryota	569	Open in IMG/M
Ga0123380_117446	Not Available	741	Open in IMG/M
Ga0123380_118582	All Organisms → cellular organisms → Eukaryota	1001	Open in IMG/M
Ga0123380_118753	Not Available	554	Open in IMG/M
Ga0123380_119407	Not Available	613	Open in IMG/M
Ga0123380_119625	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	667	Open in IMG/M
Ga0123380_120168	Not Available	656	Open in IMG/M
Ga0123380_121026	All Organisms → cellular organisms → Eukaryota	888	Open in IMG/M
Ga0123380_122685	Not Available	545	Open in IMG/M
Ga0123380_123250	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	570	Open in IMG/M
Ga0123380_123267	All Organisms → cellular organisms → Eukaryota → Opisthokonta	570	Open in IMG/M
Ga0123380_123476	All Organisms → cellular organisms → Eukaryota	539	Open in IMG/M
Ga0123380_126933	All Organisms → cellular organisms → Eukaryota	852	Open in IMG/M
Ga0123380_127203	Not Available	1206	Open in IMG/M
Ga0123380_128804	All Organisms → cellular organisms → Eukaryota	507	Open in IMG/M
Ga0123380_129602	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	832	Open in IMG/M
Ga0123380_130423	Not Available	797	Open in IMG/M
Ga0123380_131323	Not Available	622	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0123380_100667	Ga0123380_1006671	F000491	VQPASSRAFAAASPWGTDHWRHSKAAFKDWTKAAVAPGVSREKREFFGFCALAFGDVDVDKDGFINLEEFDRLLESVAAVPRRYGLAPVSTVSTLERQMAHKKLFDQLDTKAGPARGVLGLDQFVEWAFDHVISKIGKVPAKDVGLYQVQDYTEEEYIGFVERAVNNPGSYEHASFYNFILNCFVEADEQCEGRITYDQFDKLLTRAAVVPRHFGLAPPESSTEARKKMFDQLELVRGDKKTGYVTARTFWEWTVVHVKGMIELQKAGKGWRENH*
Ga0123380_101099	Ga0123380_1010991	F097448	SFEEKQQLRADEIAAIAKAIEILSDGRVDAGHQHIGLAQTASSFVQTDRADKFLGQSEGIHRRLREFLAGEAQRLHSKNLGLLSEKVGADPFAKVKKLIDDMITRLLEEANADAEKEGWCDTEMGKSKVTRNKLSEEIDGLDAAIEDGKGTIMALTQELADLADEIEDLDAQMGE
Ga0123380_102427	Ga0123380_1024271	F000491	LVKVVLSHFCWCIMLAPVRSAARPAARTFSASPWGTDHWRHDKQAFKAWAKEASEPGSSKAKRELYGFLALSFGDVDTDKDGLINAEQFDQLLAEVAALPRRYGLAPLDVGDAVSRAVNHKILFDSLDTKNGPARGVLGLDQFIEWAYDHVVTHVPKVPAKDVGLYHVEDYSEEEYIGFVEKAVNNPGSYEHASFYNFILNCFVEADEQCQGRITYDQFDKLLSRAATVPRHFGLAPPESSTEARKKMFDELELKRGGKGTGYVTARTFWEWTVVHVKGMIELQK
Ga0123380_103332	Ga0123380_1033321	F017832	TNADDDAASFKNTAVPTTYLDMFGWNAAVMGFGSSLWMNEVLASFDIIVTNVSNSYRLQEECDVLSLRLAKYKGVINLPEYKAVMLAALRSLVAKEWSTAHEVAWTWLWENVERMLKNLMGKPAVQEKLAPVGQDYFKQSTTRLHWIADKIVSWTLEMYQEPKRMVEDIS
Ga0123380_104346	Ga0123380_1043461	F000981	KVAAVPRRYGLAPVSTMTTLERQMAHKKLFDQLDTKAGPARGVLGLDQFVEWAFDHVISKIGKVPAKDVGLYQVQDYSEEEYIGFVERAVNNPGSYEHASFYNFILNCFVEADEQCEGRITYDQFDKLLTRAAVVPRHFGLAPPESSTEARKKMFDQLELVRGDKKTGYVTARTFWEWTVVHVKGMIELQKAGKGWRENH*
Ga0123380_106215	Ga0123380_1062152	F001926	VRHEDTPETNNPKIRFAVLEGDKLMKEVLNGGYNVHPVPPPNSEIEERIRRKYERKRSKIERLLILGYTTSGDP*
Ga0123380_107290	Ga0123380_1072901	F001108	LKGVKLALKILNEYYAKAGKAHGSSDGAGGGIVGMLEVIESDFTKGITEMVAAEQMAADTYEKETKENAVEKTTKEQDVKYKTKEFTGLDKTIGELTSERSGVEDELTAVNDYLASLDKKCTYKVESYAERKARRQAEIDGLKEALEVLESETALVQTSARHTLRGVRKH*
Ga0123380_107348	Ga0123380_1073481	F000048	LKGRYKKVKDVSDEWMKKADTLVKEWKLLDNTVNELNSWVAKDRGAETEQQFSLEKMESTLGELKNIFKEKERLVDNL*
Ga0123380_107489	Ga0123380_1074891	F001926	TNNPKIRFAVLEGDKLMKEVLNGGYNVHPVPPPNSEIKESITRKNERKRSKIEKLFTLGYTTSGDP*
Ga0123380_108032	Ga0123380_1080321	F045528	MKSLSLIVLFALALPAMGTDPLTLTLGSTAYTLTGAQVSIAAASVAALAITKELLILADLGAFRKGKRDVNAVLNTPLDFSAYFDRIAKSDSDNCAKPLVCHSMAKSEQTLNAEEKAITKLFDNLEVINPYSGYAEYQLAAYAGTFKHPELCVARYNTCRTPIQKL
Ga0123380_108383	Ga0123380_1083831	F004023	LFRKLYLNVFEYENESAKSGVFTFLIFQVVVFFGLVLCATHLSEITLTIAANIFHTFFMFKGKFYIFTDKQLNTDTFIRLAYGHYLIAFYMAYLGLIHGVDMHYDKNETTFDGLDAEMV*DEALSSELGHMTDVIIIIAFVCYMYADPEALSYEIFMGDIGIVTDVRFYGVAPHYFRPFMA*LIACPYHRTGIFGLLFFFFALFFQPVLHGTSEQNNYNKRVLLFTKQKLNRYNMFS
Ga0123380_108910	Ga0123380_1089101	F028521	PGDDGSGNWQTVATASSSWRDIGYSEDGWTLEMDRTFEDILVAEEVDPIKTIKTAQEARLMGELSQASLANLSVAMGQVDSYVSEDDSDFAAGYDVVKAPITDSFSEMAALLIAEGPAGADRHVQMPRVVSVGAFSMQHAKAPQKVVIATEFKLLVPDSTFNVGATGGKYHLFKIVDNTNDGQTFDVN*
Ga0123380_108991	Ga0123380_1089911	F011190	KIWRIQMFRGFIEGLKKSFSGKDYLRKLNTCDTCGKPSYMYRCLKCEVDGAYRGWNKKNVQ*
Ga0123380_109099	Ga0123380_1090993	F067819	MESLFIAWGESQAWWGTFASIVVVANAITLAVKDQYAEKLPIIGKIWPIMNWLALNVHHNKNKDK*
Ga0123380_109561	Ga0123380_1095611	F007004	MKNIMLGFCLIVLIGCGTSNAYKRPDVRIVGEAQMKKLENGNYEVTPRWIKDRFDTENSMLKQLEDCREGGR*
Ga0123380_110211	Ga0123380_1102111	F068117	MTETINPANAPALEKTKSLGIKNIEGKEIFIVGCNHNRGAPTKYTRADQVGEDGKTDYYTVKIETPIDLEYKEEGIIPIDNFFVTQAIYQQLERIPNAIEGINNGARLGPAKAVKRESQKTGNPYWCLAFESDADY
Ga0123380_112176	Ga0123380_1121761	F000491	HWRHSKAAFKDWTKAAVAPGVSREKREFFGFCALAFGDVDTNKDGFINLEEFDRLLETVAAVPRRYGLAPVSTVSPLERQMAHKKLFDQLDTKAGPARGVLGLDQFVEWAFDHVISKIGKVPAKDVGLYQVQDYTEEEYIGFVERAVNNPGSYEHASFYNFILNCFVEADEQCEGRITYDQFDKLLTRAAVVPRHFGLAPPESSAEARKKMFDQLELVRGDKKTGYVTARTFWEWTVVHVKGMIELQKAGKGWRENH*
Ga0123380_113757	Ga0123380_1137571	F003081	AEVFYMHVRGVDTIMVLSYLHIMKKIYLKNYVTAESDG*
Ga0123380_113799	Ga0123380_1137992	F101069	MKTITIDLTDKQHCMLSRIAKGDKRKVSDLIYLALSRGFEYMYCETALHIDKVDSDYTDKEKKQIAKNKKLEASKGWSDLDYDEKQKRGWEHVCSVMCNYPHDNDFMPGFSESLERNATEGLKENE*
Ga0123380_113819	Ga0123380_1138191	F002029	LKRCLLFPNTPSKMRSVAFAIVTVAAARRANIKEHQPGWGDDPLDEFAIGQTEWPDCLTIPTFPGKCPIADHPGACYRTDGRMWSCWADWEESSDAECQQMTLNDEIVGFEGACKYHDYGRVMSIAEVPDCFDVNECLAECHPITDKWGACYVDDKEGVERAQRCLCAPMPGASGDAFIQTLLRGACLTSQIGYLDRAYNGLCKFPDERVQPVYQCESIPTFNARNSAVACNPGVGFNVACFSVRRRTPWQCASEAEMNPSCRTTQLVPQDGSPFYDGACVFEGAEAWSTAMIYEEP*
Ga0123380_114208	Ga0123380_1142082	F091427	MLILGVYYAGISTTISLTNLLVTRRTLAMSGLRNRRILLPFISIAILLMLRALAVITPVLGSAMLMLALDRH*
Ga0123380_115080	Ga0123380_1150801	F042166	DKPKFLDSHVSRIKEGWDETKEKASARLTLLNNTKAAWEGYGAGLENIAIEFEKAEEEIKKIKKRFNLAAAQDDLAKRKQIFNDTKNTIENMFAEIQHNYDVMTMTLPEDKKDFVKKEVKAVSEKLEVVGRFKEKVDKIDEFVTNLDNFDKTLKMVDSWMTEADKQLN
Ga0123380_116419	Ga0123380_1164191	F006551	GTDFDCTVESASGTIGTDGVLTDDVLRTFLRKIRIAAGKDPNVFLGSHEVYSEIQGLYMPSVRIANPYGEALVQVDVNGIQTFKGTGTGIHVDSIYGVPFIPTKDAPSGGGNEIGRLFALDTSDAEGYGYPRIGIQVAIPTEYYEATRRSAGYPFVNNAFVEKGVFRTMGETVCRH
Ga0123380_116549	Ga0123380_1165492	F015413	MESHDLEKQVEELLAAPKFEQSAEFEQLLPKGILGKDMLIGSAGTALSVQMGNIVGKFLPIGGLPSGTSSILAGILLQKFMGSNANIKKLSEGIIQGGIATAMTPFTSGLIPQQFSQEKKVEHTEELNPIVEGVMW*
Ga0123380_116932	Ga0123380_1169321	F001583	YKTYYIMFTNKHLNVDQLTRFMVLHYFTPYYLYLVKLHIMFCHESDTDSGENTYEDKTGSYISFYDGFLKEIQDAYTIFAFMYFFMHHFQGATVNYFFFERNISELDEIRFYGVAPHYFRPLMGLLVVTPSHYEGLMMGLWFVLLGGLPIIYN*YNSNNNYLPII
Ga0123380_116945	Ga0123380_1169452	F060086	LDSNLLLLSSRQGADRKRQYLYDHETPLLVDLADLLY*
Ga0123380_117446	Ga0123380_1174462	F030135	LATLSSFTDIWHSTFAGCQFPDAILPGREAFDLVAGPLN*
Ga0123380_118582	Ga0123380_1185821	F001707	SLEFFLNTPQHFGTMLASRAQSLTFGARYARTVASPWGAEGWRHNKTDFAKWVKEASTQPNSKAKREFYGYLQMAFGDVDVDKDGKINAQEFDYLCEKVAAMPRRFGYAPSWEAEYGGSVEKRTAARKAMFDAVDAKQGAARGWIGAAQFTDWATTHIAGKIAGLDTASEVDFYHVSNYSEAEFLKAIEVAVTNKNSREYASLYEFLLTAFVETDATCRGEITFSEFNKLIERAAAVPRTFGLAPPDGTAEARKAIFESMDDTKTGLITFRKFLEWTVTHTNGKVEAHKAGKGYKK*
Ga0123380_118753	Ga0123380_1187532	F009987	MLNLIGNALGLGLKIMDKIDKNSDKPSFEEFKERKKEMDKSLADGDVNGIDSMFEYLAERARAGKTGRRG*
Ga0123380_119407	Ga0123380_1194071	F101917	QLLIGHNMATQNTFVIEYGLTVGSTEIITSAGKLVASAISELDTDDLSEGSTNQYFTTSRFNTSFDTRLASATIDGGTI*
Ga0123380_119625	Ga0123380_1196251	F065809	HLHSISFTAAAMAFRGGVLAMGVQLAQSETYCPTLGDFDIAWGSVSSQGNGWRVDGEGGVHGRTSWNLLGGYIEFDMDVCGAQTGVNNNFYTISPQGGPSSGYCDIQTNDSPICMELDIIENNGKCLGQTTWHVWGNKNGGCDQNGCYGQYHLDDGCQFHMRTEFGEDGSITQYRNGQVIAVNGGPSGTEKAQIKQNMQNTGASMASTQWTGWVPDDGSCG
Ga0123380_120168	Ga0123380_1201681	F090416	LLVNNDLTVDYNQIVKRDLTVYSNLLVNNNLTVDYNQIVKRDLTVYSNLLVNGYEVIDGDLVVKKDVIIDKNLYLEGTLRASNLEVIGEKTIIDTQTYETENLHIMNDSADGASVKIEHRDNINNILEASNLSDNFVIIDKEVRLGINKVPIAQLDVNGDAYIETDLIVNKDVFINRNQIVEGSSIIKADQLVKGNQIINGDLEIDSNQLVKKDLTVY
Ga0123380_120211	Ga0123380_1202111	F000183	QQSCARAPADQQQACQTTATGLLFCQLIQRSKPEMAAEANCVQHQNDYVHDAAPAAPSFTQTFMERAPEDDLAQEMTHDLEMNFNKIAPFGKEDTAKELQDHAAKTQDTLVDAVENAEVAEIKRAVFRALTRLRAATIKEFDTIARLETQAIDAYNDAHHYRAENPLTHLHEDEAPVETDKLKPFH*
Ga0123380_121026	Ga0123380_1210261	F002556	MLAMRFGDTDVDKDGKINAAEFDGLCEDVASLPRRFGLAPSWEKEYGTVERRTASRKAMFDMLDLRQGPPRGWIGLEQFVNWATDHLITKVATIDIGADVDYYHIEQYGEHQYLSHLEEAVTDKNSRAHASLYEFLLAIFTECDSRSTGVLTFAEFDLLLSRAAEVPRTFGLAPPEASKEVRKQFFDSMEDKQMGGVTFRLLLAWTIEHSKGKIALQKSGKGYKK*
Ga0123380_122685	Ga0123380_1226851	F044287	MLAPVRSVAQPASARAFSAASPWGTDHWRHSKAAFKDWTKAAVAPGVSREKREFFGFCALAFGDVDTNKDGFINLEEFDRLLETVAAVPRRYGLAPVSTVSTLERQMAHKKLFDQLDTKAGPARGVLGLDQFVEWAFDHVISKIGKVPAKDVGLYQVQDYTEEEYIGFV
Ga0123380_123250	Ga0123380_1232501	F003081	VELREEMFNDTRFGAEVFYTHLRGVDTIMILSYLHILKKIYLKNYVNTEADG*
Ga0123380_123267	Ga0123380_1232672	F019659	VLLLQFKILLPEGIDTINHGLDKLDLRVTKTMFVGNVIGVSSLATRFTTGTTGLQVKSLTPGLQAINAVLGPAGQVNVDGGTHASAQVGGARVNVTELGGEQEVLARFSLDGVTDSLDASGETLEDSLDITSLLHGDDTELI
Ga0123380_123476	Ga0123380_1234761	F000981	LDTKNGPARGVLGLDQFIEWAYDHVVTHVPKVPAKDVGLYHVEDYSEEEYIGFVEKAVNNPGSYEHASFYNFILNCFVEADEQCQGRITYDQFDKLLSRAATVPRHFGLAPPESSTESRKKMFDELELQRGGKGTGYVTARTFWEWTVVHVRGMIELQKAGKGWRENH*
Ga0123380_126933	Ga0123380_1269331	F000491	IMLAPVRSAARPAVRTFSASPWGTDHWRHDKQAFKAWAKEASEPGSSKAKRELYGFLALSFGDVDTDKDGLINAEQFDQLLAEVAALPRRYGLAPLDVGDAVSRAVNHKILFDSLDTKNGPARGVLGLDQFIEWAYDHVVTHVPKVPAKDVGLYHVEDYSEEEYIGFVEKAVNNPGSYEHASFYNFILNCFVEADEQCQGRITYDQFDKLLSRAATVPRHFGLAPPESSTEARKKMFDELELQRGGKGTGYVTARTFWEWTVVHVKGMIELQKAGKGWRENH*
Ga0123380_127203	Ga0123380_1272032	F097458	PISLSLTFAALLPRRGISALADTPRLFPRHRIPIDSRYELLGSPILFDTRTLEVRRQIKNK*
Ga0123380_128804	Ga0123380_1288041	F000981	HKILFDSLDTKNGPARGVLGLDQFIEWAYDHVVTHVPKVPAKDVGLYHVEDYSEEEYIGFVEKAVNNPGSYEHASFYNFILNCFVEADEQCQGRITYDQFDKLLSRAATVPRHFGLAPPESSTEARKKMFDELELQRGGKGTGYVTARTFWEWTVVHVKGMIELQKAGK
Ga0123380_129602	Ga0123380_1296022	F052646	MKKIILIGLCLLFFLGNKPTTANQHETTVPLSDILLYCNTPEFIRNMAENDYMLGLAASGVVNDDRHRTLISMDLLMNPSNKQWAIIFNYAKGNLSCIIGGNHLKLFSPKK*
Ga0123380_130423	Ga0123380_1304232	F009987	MINLIGNALGLGLKIMDKIDKNSDKPSFEEFKARKKEMDETLADEDVNGIDSMFEYLSERARAGKTGRKG*
Ga0123380_131323	Ga0123380_1313231	F036714	MESATNMLKNGATPQVVDFAEETLSEVSGVVIPAIINESLNDQRFIYALHSRFQDILDTLSSENQEVFQLNAEEQAASATHKGCRDMEAGECNGKRTCEMELYRRWTVWVTEEEELREIHAQIDGHFCPPGSNGTLHAFRVAAVGPMQAYMAQKIVVDEAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009724: Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_245_18m (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences