Sample 3300010168

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Sample 3300010168

3300010168: Soil microbial communities from Bangor area, North Wales, UK ? before enrichment

Overview

Basic Information
IMG/M Taxon OID	3300010168 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121424 \| Gp0154102 \| Ga0136211
Sample Name	Soil microbial communities from Bangor area, North Wales, UK ? before enrichment
Sequencing Status	Permanent Draft
Sequencing Center	Fidelity Systems Inc
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	14574824
Sequencing Scaffolds	1
Novel Protein Genes	1
Associated Families	1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → university campus → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Bangor area, North Wales, UK
Coordinates	Lat. (^o)	53.24	Long. (^o)	-4.01	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F007655	Metagenome / Metatranscriptome	347	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0136211_104409	Not Available	750	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0136211_104409	Ga0136211_1044091	F007655	VVFTIALLVGVAGITVARAHGDREGGAPLVVLALLLVGVVTLDAVGRGVVSVTRLVLDGGLRRHS*

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