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Sample 3300011239
3300011239: Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 1 - S13.2.10.a - transect 2, age 0 years, surface depth)
Overview
Basic Information |
IMG/M Taxon OID | 3300011239 Open in IMG/M |
GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0121480 | Gp0155447 | Ga0137006 |
Sample Name | Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 1 - S13.2.10.a - transect 2, age 0 years, surface depth) |
Sequencing Status | Permanent Draft |
Sequencing Center | University of Bristol |
Published? | Y |
Use Policy | Open |
Dataset Contents |
Total Genome Size | 33376241 |
Sequencing Scaffolds | 1 |
Novel Protein Genes | 1 |
Associated Families | 1 |
Dataset Phylogeny |
Taxonomy Groups | Number of Scaffolds |
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium | 1 |
Ecosystem and Geography
Ecosystem Assignment (GOLD) |
Name | Metagenomes Of Arctic Soils |
Type | Environmental |
Taxonomy | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils |
Alternative Ecosystem Assignments |
Environment Ontology (ENVO) | terrestrial biome → glacial feature → soil |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
Location Information |
Location | Norway: Midre Lovenbreen, Svalbard |
Coordinates | Lat. (o) | 79.1005 | Long. (o) | 12.15611 | Alt. (m) | N/A | Depth (m) | 0 |
Location on Map |
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Associated Families
Family | Category | Number of Sequences | 3D Structure? |
F045483 | Metagenome | 152 | N |
Associated Scaffolds
Scaffold | Taxonomy | Length | IMG/M Link |
---|
Ga0137006_108360 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium | 676 | Open in IMG/M |
Sequences
Scaffold ID | Protein ID | Family | Sequence |
Ga0137006_108360 | Ga0137006_1083601 | F045483 | VTETRRQSTRLANPRRLFSGLSVLGLSLFVLTGCVVPGGYDVNSLHLLPESGLVYPGSTGVHTNDYGGSPGNYIGKGAVAATGKSATTVHTQLEVLAYFSQTLAADGWTQTAADDTATTPEGFRAKDISWVKNSLHLSYLVVVWTVGETTHYDTQLSANE* |