Sample 3300011309

3300011309: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 Surf_A metaT (Metagenome Metatranscriptome) (version 2)

Overview

Basic Information
IMG/M Taxon OID	3300011309 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0127476 \| Ga0138368
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 Surf_A metaT (Metagenome Metatranscriptome) (version 2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	67273135
Sequencing Scaffolds	41
Novel Protein Genes	47
Associated Families	37

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	16
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	1
All Organisms → cellular organisms → Eukaryota	4
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	2
All Organisms → cellular organisms → Eukaryota → Sar	2
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Ochromonas → unclassified Ochromonas → Ochromonas sp. CCMP1393	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Libanvirus sp.	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000007	Metagenome / Metatranscriptome	8691	Y
F001145	Metagenome / Metatranscriptome	765	Y
F001219	Metagenome / Metatranscriptome	744	Y
F001293	Metagenome / Metatranscriptome	729	Y
F001682	Metagenome / Metatranscriptome	652	Y
F002407	Metagenome / Metatranscriptome	562	Y
F003068	Metagenome / Metatranscriptome	509	Y
F004869	Metagenome / Metatranscriptome	420	Y
F005533	Metagenome / Metatranscriptome	397	Y
F005911	Metagenome / Metatranscriptome	386	Y
F007173	Metagenome / Metatranscriptome	356	Y
F007922	Metagenome / Metatranscriptome	342	Y
F010164	Metagenome / Metatranscriptome	307	Y
F010476	Metagenome / Metatranscriptome	303	Y
F011083	Metagenome / Metatranscriptome	295	N
F012124	Metagenome / Metatranscriptome	283	Y
F013897	Metagenome / Metatranscriptome	267	Y
F020014	Metagenome / Metatranscriptome	226	Y
F020701	Metagenome / Metatranscriptome	222	Y
F023529	Metatranscriptome	209	Y
F028715	Metagenome / Metatranscriptome	190	N
F030342	Metagenome / Metatranscriptome	185	Y
F032308	Metagenome / Metatranscriptome	180	N
F034581	Metagenome / Metatranscriptome	174	Y
F041824	Metagenome / Metatranscriptome	159	N
F046205	Metagenome / Metatranscriptome	151	Y
F055765	Metagenome / Metatranscriptome	138	N
F060046	Metagenome / Metatranscriptome	133	Y
F060049	Metagenome / Metatranscriptome	133	Y
F070006	Metagenome / Metatranscriptome	123	N
F071278	Metagenome / Metatranscriptome	122	N
F081236	Metatranscriptome	114	Y
F088945	Metagenome / Metatranscriptome	109	N
F090441	Metatranscriptome	108	N
F098503	Metagenome / Metatranscriptome	103	Y
F099360	Metagenome / Metatranscriptome	103	N
F100444	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0138368_1004896	Not Available	641	Open in IMG/M
Ga0138368_1018802	Not Available	543	Open in IMG/M
Ga0138368_1021483	Not Available	545	Open in IMG/M
Ga0138368_1023610	Not Available	897	Open in IMG/M
Ga0138368_1024082	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	600	Open in IMG/M
Ga0138368_1033039	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	523	Open in IMG/M
Ga0138368_1037006	All Organisms → cellular organisms → Eukaryota	1090	Open in IMG/M
Ga0138368_1038176	Not Available	759	Open in IMG/M
Ga0138368_1041310	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	641	Open in IMG/M
Ga0138368_1042592	All Organisms → cellular organisms → Eukaryota → Sar	4419	Open in IMG/M
Ga0138368_1042945	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	695	Open in IMG/M
Ga0138368_1051404	Not Available	570	Open in IMG/M
Ga0138368_1056072	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	671	Open in IMG/M
Ga0138368_1059051	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	518	Open in IMG/M
Ga0138368_1059663	Not Available	672	Open in IMG/M
Ga0138368_1059954	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	651	Open in IMG/M
Ga0138368_1067404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	545	Open in IMG/M
Ga0138368_1073418	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Ochromonas → unclassified Ochromonas → Ochromonas sp. CCMP1393	565	Open in IMG/M
Ga0138368_1073972	Not Available	1697	Open in IMG/M
Ga0138368_1083212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	683	Open in IMG/M
Ga0138368_1085483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Libanvirus sp.	843	Open in IMG/M
Ga0138368_1089643	Not Available	646	Open in IMG/M
Ga0138368_1094386	Not Available	888	Open in IMG/M
Ga0138368_1095970	All Organisms → cellular organisms → Eukaryota	1310	Open in IMG/M
Ga0138368_1096061	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales	2007	Open in IMG/M
Ga0138368_1098383	Not Available	616	Open in IMG/M
Ga0138368_1098623	Not Available	537	Open in IMG/M
Ga0138368_1107052	Not Available	866	Open in IMG/M
Ga0138368_1108132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	538	Open in IMG/M
Ga0138368_1111342	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium TMED45	645	Open in IMG/M
Ga0138368_1112260	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Ochromonas → unclassified Ochromonas → Ochromonas sp. CCMP1393	911	Open in IMG/M
Ga0138368_1120434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	656	Open in IMG/M
Ga0138368_1120458	Not Available	615	Open in IMG/M
Ga0138368_1123454	All Organisms → cellular organisms → Eukaryota → Sar	1205	Open in IMG/M
Ga0138368_1128928	All Organisms → cellular organisms → Eukaryota	639	Open in IMG/M
Ga0138368_1129251	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
Ga0138368_1129669	Not Available	764	Open in IMG/M
Ga0138368_1130982	Not Available	702	Open in IMG/M
Ga0138368_1131365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	505	Open in IMG/M
Ga0138368_1134763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	699	Open in IMG/M
Ga0138368_1135779	All Organisms → cellular organisms → Eukaryota	705	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0138368_1004023	Ga0138368_10040231	F034581	MNITCRPGFNSSSWGPNYYRTATTDGEWSGHLPTCVGVVMAPLYESTLFVQDGSLTVSSVPEVTPELVTGRGGAMPILEDRDECGDDQLWCDLIAPSAGHLMQYTVTKEYSKEVELHWTGSTTEYIVDIYNTNTKPSVAIPFDEPRFPAEMNITCRPGFNSSSWGPNYYRTATTDGEWSGHLPTCVGVVM
Ga0138368_1004896	Ga0138368_10048961	F002407	TINKIDGYELSSFVRKLLPIDKFIFMKIAKEGTVSSVYFPERDAVKLVNTPTEDIFEADIEAPVKVSFYNGTKVIDALSHFNGDVKGRIKYTEYDGELMASDFILENDDLQINLACTDPSLSFMEMSKEETDRAFGTDSKMFEFDLLTTHVDKMKSLFNLDKEEDIFTLYIGEKGINIKGTSYDATLCHSYDSTVEKGAKVVIYKKYINLLDK
Ga0138368_1018802	Ga0138368_10188021	F100444	FKYSFIKSLAFGTLGFLSLALFSISSLVFAKEEMILVADNSFNTSHLFSKFEKLSTSLNSVKVVRNYKSQVDFGSDPITNEIWYPHKSATINYYVDCKISKLSIKSWKLFEGSNASGEIVWADQIFGNLSFYSPGTDEELNAVLNTCNNSFNFAAKEF*
Ga0138368_1021483	Ga0138368_10214831	F011083	LVLTTVKSSMMKQVVQVGHYDNTAFATDARMREEFVMVYHDPYGGVWRTDGIVASTSDIIAASRVEDALRALPNEVLEGVTVKARTSDTVSLCTRFHDGVQHLGGYSETTDGNFKNSKMSTNYCETTYTMATGSNKMDFTIEFADKPGQTGVQYLFEVDINKRGAGSFPVSGGITGTGAY
Ga0138368_1023610	Ga0138368_10236101	F001219	MNFPITFLLNAGGLFDFDLTFLIEAVLFITLAFVVTNVFLSPISKQLNERSEFINYTLRKATILLTFGYEKLIGCVGLLTEEIGEMNRQIKLTKDYTNASFESEVSSVQQANSQLLSKLKGDLSIKSAFVFSNITVDLVSLT
Ga0138368_1024082	Ga0138368_10240821	F070006	NKYQVYLANGQNYQFLAKGEFKKNVGDDIDFEVTNEQYKTAKLVYTQPNKVSGSKDQQIIRQSMVKAAADFHASRPQSDIHTVIADAQLLINFVNNE*
Ga0138368_1033039	Ga0138368_10330391	F001145	FIQLNTNFLETNVVNILLLLGILIYANKTSFSVGLENRQKEIIQTIENAQKDVTNASNYYYLAEKGFTQSLFWLQSWKSLYEKDKIDIVNSKYNLVKKGLTETFNTTENLIKNFENKSFVSLQRYMILVTASRILRKFLFLSEGEQSKLIEVTISKLGGFKK*
Ga0138368_1037006	Ga0138368_10370061	F001682	MVAAVAVAALATLSNTAEITSNNIRDGAAFDNLKASWNQALKLGDFSSSLRCNYDRNANKDFLKDVQLSGDLVEAASADDVKVSYEVTHNFADKKTNVKLSANTQGTTLGAEIDDRQLQEVSAERDVEFSGNSVNVQPSWLVKAKTARVKLMSSLGKDNDRVSAQVDYDTNAGELGGVELGYERNLEEGRDVSATFRPSSKDLDIEYVDNKFESGATWTAKASVPLESGGNSNLLDAAKVTLKRAWAW*
Ga0138368_1038176	Ga0138368_10381761	F005911	MSLKAKILKMLNSKKGNALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSLKAKIDGADINQARLGGGTENDIEAPIDDLFHNGNFITLAQMVKKAVIIVADDPTATARSGSDQAYDLTNSGALIKYADAAGNVIEADSDDGSDSVPIVTDVQVFVNLAGTADATTNSPYTAGEPFYYILMDADTAGLTASDITVDATQFPTGILATNDGGPQAEVSVIL
Ga0138368_1041310	Ga0138368_10413101	F030342	NWKLSKPLPGQSLAAHRKWLDCWQNIEIADLHYFPLWEKGVFDCLQECFQDLTNIFAHYAKSIGGSTTAEDAVEMTMSEFKDLVKDVGLETKDLKFDVMSNMFKKANALNTNAVMEQRKQAAGTADAKREGVGSTSTKMSQVNKRSKSGSKGREDEMDMELVLYEFVEVLIRIGFWRANPYHGINKLAAKLVPLPDCLHQMLHEVVLPNAKRD
Ga0138368_1042592	Ga0138368_10425923	F001145	MDLNTLSFFLNEEPLVQLNPNILESNVQNIVILLGILIYANNVSFSVTLENRQKEIIQTIENAQKDVVNASNYYYLAEKGFTQSLFWLQSWKMLYEKEKADLVTNKYKIIKSGLEETFDTTENLIKNFENKAFISIQRYMIFITASRILRKFLLLSEAEQSKIVEITIAKLGGNK*
Ga0138368_1042945	Ga0138368_10429451	F007922	YIRAVRFDLGESQPIKDETPEEHAAFLADFKQLNLEGLYGFPLWEGEVHDILHANYKELSSIFKAYCKSLGESSADESSKTMDVEEFHDFVIDVGLETKLQTMKGAEAATYTFEQMKEQFTKADKSGKGLAGPAANQELVLYEFLNVITRVSFYRLNPEYGELTMEHQESVLPVPQALDTTIKESILPKAHRDDAGEFRGKVMQMPEVQAALAEGRPRLQAWYATIPLDDN
Ga0138368_1051404	Ga0138368_10514042	F010476	AYNKLGKIQETENLFCAPDEINDVMYTMSEQYGYAEAYDTMDTHMGEYGERPLSLGERRYF*
Ga0138368_1056072	Ga0138368_10560721	F098503	RRSANDGKKEDVKQPELPKHLTCDRFSDDYPEPGSMKVQKPDNRLTLTEFLGCLVRISFLRANPKHGQYDNKAKLVELPGCLKKMLEEVLIPNAKQDMSSLFREEIAQDAEVQAVFEEYREKLTFYYTEVNTLMAVKGKPDNKLSMETWMDIARGFLTFTKRKGSKMMEKAKTTSKAGESAGLGESAICGDCTVKRESDITGDERCKETFTCRLTILESKYAF
Ga0138368_1059051	Ga0138368_10590511	F001293	MMRNSLICKLINVQASMKENNEKKIIKEDEICKLIKAPPKDTAALDKRSVLAKVNSQGSGT*
Ga0138368_1059663	Ga0138368_10596632	F013897	MNFTKDQLLALMNTIDFATDNDASYEEYTILQSGTSDLEPIRDILYNEYIHQT*
Ga0138368_1059954	Ga0138368_10599541	F046205	VLKVLDDYRGKLKAWYTAVTADDTGKGGAGAANPSEVSDKLQLEQWKEICVNPGPHCEQDLVGIWECYRESDITGDPACRTKYMWRLSMPQIKMAFLDSQPPDSLQAAQSNANDESNVVDFDEFLEVVARCGIDKYRAVKEVSPARAVKGFIQNLLNEMSPDEVVIEATYIHAERYDAEKETKPLKSESQKDLEKWLACWERMEIMDVHLWPLWEKE
Ga0138368_1067404	Ga0138368_10674041	F099360	VVFATSPCSKQNDMRTSRSQHVLVECLVIAFGAVLALFWGLEQAMAWVLGGLILLGALTAQRAWSKRRPDRVGQSVIAKWLVIALGLSAVFSGWNAVPLAFLILGALAVNLAGPISAVVVATNRRRH*
Ga0138368_1072727	Ga0138368_10727271	F034581	ELHWTGSTSEYIVEIYNTNTVPSQSIPLDTPRFPAEMNVTCRPGFNTSSWGPNFYRTSTTDGEWSGSMPVCMGVEMASMESMPSFVKAGSLSVSPVAEFTPSAASSGAAVAILEDRGDCGADPLWCDLVAVSAGHMLVWESTQGYSQEADLHWTGSTSEYIVEVYNTNSEPSQAILFDVPRFPAEMNITCRPG
Ga0138368_1073418	Ga0138368_10734181	F060049	MLFLLATPEYNNVQSNTTKVRVHLRSGIAEIFEQHQDLMGKVDNNIVEIETNFENKIEKTAFVLQDAVFIVSNQQDGKEEDGTGVYVYAKRVREITPSLSLEEISKQYEEKLQAFETEKQKLESDNIDPLDQNLNAKLFVLKDEVDFLKKVVSVVKESK*
Ga0138368_1073972	Ga0138368_10739721	F005911	REGRNKYKTRTKGGRKTMSLKTRLLTMLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGSGTEADIESPVSELFHNGNFITLKEMVKKAVIIVSDDPTATARSGVDTAYDIDNSGVLIKFADADGTVIADGTGGDTIVADVHLFVNLAGTADANTNAPYTAGEPFYYILMDDATAGFNDPTTRTIDLTQFPTGILATNDGGPQAEVSVVLPQDTEE*
Ga0138368_1073972	Ga0138368_10739722	F005911	VAYKKKIKFNKEGGKLTMSLKIKLLTLLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGGSTEAELEAPIDDLFHNAQFVTLKDMVKKAVIIVSDDPTATTRVGTDTGYDLDNSGVLIKFADVDGTVIDDGTGGDTLVADVHLFVNLAGTADATTNAPYTAGEPFYYILMDDVTAGFNDASKRTIDLTQFPTGILATNDGGPQAEVSVVLPQDSEE*
Ga0138368_1081877	Ga0138368_10818771	F000007	SGHRLPPAGVLQDRQKTMQVLLLLVPVLARLGQDPAPEDALAKEMTHDLEMNFNKIAPFGKEDTAKELQDHAAKTQDTLVDAVENAEVAEIKRAVFRALTRLRAATIKEFDTIARLETQAIDAYNDAHHYRAENPLSHLHEDEAPVETDKLKSFH*
Ga0138368_1083212	Ga0138368_10832121	F032308	VIVIPSCFYSGDVSIKEGATLTVWVPIGAINNSDDLNLEINLV
Ga0138368_1085483	Ga0138368_10854831	F005533	MSYTKNEVALETLISNINNQFYYIGEEDDKVAPIDVKKFTEHCVAFIDSLEIEND*
Ga0138368_1085483	Ga0138368_10854833	F004869	MSYDTEHYYTLHTFLEDDELHEIWNIVEKAMNREGYDVSNSELSMRLYDSELEENIEHDMENLLSSLSEGKDQPVEKAAHGHVRKDLDTL*
Ga0138368_1089643	Ga0138368_10896431	F090441	IKGEVWELATLSFLDLLALGALITRRVIVGCQFPDAVSRCKNDCNVFGSHSGT*
Ga0138368_1094386	Ga0138368_10943861	F090441	FIKGEVWELATLSFLDSLALGAPITRRVIIGCQFPDAASYRKNDSDMFRSHSGT*
Ga0138368_1095970	Ga0138368_10959701	F020701	MSEIESQNNVEVPEQSAFNKSVKPIVGTCLAISALAAMALTSSPAAVTNPGKPVASATQLEVVKQGKQPIKDGCANIYGSDPDQVFIDPDTGLRVLTAVFTICDDRSLNGVALDSLGFDHQNDIDIGLTYVETGPGCWLTLYDGPNFNGKTAVISPETSMHLKHVGARNWNDLTRSITTRSSTGDGVALYLSHRVALGSVNDHCVAMYNANPEIYPKADGLYLCGDKNAAKTWHFDLADIIEQGFNIDGSHFGIKYIMSGRKVTLKVYDGPTRNTINHGPLEMGGHETLDLETVKYGDEHWESKAKSFTLVEV*
Ga0138368_1096061	Ga0138368_10960613	F010164	FSVSLENRQKEIIQTIENAQKDVLNASNYYYLAEKGFTQSLFWLQSWKVLYEKDKIDLVTNKYNLVKNGLLETFLTTENLIANFEKKAFITLQRYIIFVTASRILRKFLFLSDEEQSKLIEVTISKLGGV*
Ga0138368_1098383	Ga0138368_10983831	F005911	VSLTTLSEDSKQRVAHLYNAYQMGQSIKAKIDGADINQARLGSGDEDQIEAPINELFHNGNFIKLSEMVKKAVIIVSDDPTATARKGYDIGYDTENSGVLIKFAAADGNVIQPDQGDADDTIVADVHLFVNLAGTADTDANAPYVDGTPFYYILMDATTAGLADSLETINSTIYPTGILATNGGGPQAEVSVVLPQDSED*
Ga0138368_1098623	Ga0138368_10986232	F007173	MQTITKAKISRNELMDYIHEDRDLLIGIQDDLSEMLWATGQFSITLDEIVQNFMPFIPLYLIENEDEIKQAFPDRITDDEYIFIYDKDMTPNEITLNVEWRD*
Ga0138368_1107052	Ga0138368_11070521	F023529	MKQAAYVTRDEPDRVWFVDTKQGSAQPSYYAVAHADMTHPSAVTAGDTIYVGEQRCDVVSSDADSTAGLKGEGSAVETYHSSSVVCAQALSENAHSTSDAIVTHDPIEVLFEGATQSCTSTDRPALRFIHDLATTDSSNLCADATACATVLEYNGQNRLVRWANGDTIADVSTHELMDNNDIAVNDRVSIRTMNSHTYETRTVDYINLQGLGASTDNFFTVSQPFTAAHAEKRIFLNFKGTTSSAACSGRGLCDGSSAECQCFKGYTG
Ga0138368_1108132	Ga0138368_11081321	F041824	IDRSTTQAIGRGLEKVQELHHGKHVFQWKVIRIL*
Ga0138368_1111342	Ga0138368_11113421	F055765	ANMYNKQHIEMAKKFLANENVGFDYDAEEMRISFGIDVNDKIWTSGDSIWSETKAKKAVAVESLSLAATHSKMHYSEEDWKDLTAEDLYWSGGLDGYCYYDGSGKDGTWNDGEEYTLEEKGGLINGMKKEGTGDGYIYTDDGFVRNLEKYLTDKCDFDKALFDYLGFEYSEQGMQAAGAVNFDVEMDGDFWLAVHKEMEAESKLAA*
Ga0138368_1112260	Ga0138368_11122602	F012124	MLFLLATPEYNNVQSNTTKVRVHLRNGVAEVFDQHQDLMGKVDNNIVEIETKFENKVENLLFVLQDAVFIVSNKGLDLNSENNETGVYVYAKKVKEITSNLSVDSVSKEYEQKKADLETENLKLGANEITDKAINSKIFMLKDEVEFLEKVVTVVKDLKS*
Ga0138368_1116879	Ga0138368_11168791	F088945	SYLELCSGCADSMADGASNTDTGSEIQTDGNFGGGFDLKRGEQLMLGSATKFDAQLSVVVDQVDLFNDGSSPATVGVSSTAGALGTKAATIAANSDVAIYKVHNTAGYKPVIITESASNTNYQYVSQCSNRGACDGSTGLCSCFKGYTNDNCDTQNMLAA*
Ga0138368_1120434	Ga0138368_11204342	F013897	MNFTKDQLLALMNTIDFATDNDASYEEYTIIKSGTSDLEPIKDILYNEYIHQTQ*
Ga0138368_1120458	Ga0138368_11204581	F003068	QRITIMRKILTLISVLSLVSFNAYAVDVSQLSVTAGVAHNSAVYGASAKETNRNESNVVKTVDKESGVFTESHQSYFMELNAGEFISLGFEHTPDSITTPENQRITNTNATTKVKVDFNDLNIAYVKLNVPGGLYVKAGVVETDLDIKESMASGSTYNNVSTEGTLLGVGYSRDLGDSPFSIRVEGSYMELDDVTTSNGVSATGG
Ga0138368_1123454	Ga0138368_11234541	F001219	MTFSTTFLINAGSLFDFDLTFILELLLFVLLALVVTNNFVGPISKEIDDRAEFINYTLRKSTILLSFGYERLTECVELLTNEINEMNRQVKLTRNFVNENFEKEVVLAQSQNSKLLSKLKGDLAIQSACLFSNINDELTFITDKFFIKKFQSVS*
Ga0138368_1128928	Ga0138368_11289281	F020014	ANQKGYSDDPKPEYDPKKNRVNMPRAAKPPTVATIQRGTRPISLIVF*
Ga0138368_1129251	Ga0138368_11292511	F100444	KHSYIKSFTFGILGFLSIALISISSFVFAQDDMILVADNSFNTSHLVKKFVEVSPSLNSVKVVRNYKNQVDFGSDPITEEIWYPHKSATINYYVDCKSGKLSIKSWKLYENNNASGEIIWADQIFGNLSFYSPGTDEELNAVVNTCDNSLNIAAKQF*
Ga0138368_1129669	Ga0138368_11296691	F071278	MSLKKRLQFLLKSTKGNALLLATAGAIAATFSVYFFVSISTLSDDSKQRVTHLYNAYQMALSVKGKINGDSMQANKLDGTNVEDDIEDSLDPLFHNGSFITLREMVIASIIIVQNDPTTTSERGKKIPYDVDNSGVLIKFANSTDAVIAPSDTNRAIEDRANLAKVHDLHLFVNLAGTTDIDSRPNGPYAVGDPFFYVVMASDSDTGRTDGLTDALKTVNLTQFPTGMLATNQGGPQ
Ga0138368_1130982	Ga0138368_11309821	F028715	IGYLYQGTMTIENGGDATGYMFVRRNGAGVTFRVGHTFEVTSGSPYNYQFSFPPAIPEKSDIDVRALVRSNNSRVTAAFDILLVENDPEAPITDLL*
Ga0138368_1131365	Ga0138368_11313651	F041824	LLIDCSTTQGIGRGLEQVKELLHGKHVFQWKVIRIL*
Ga0138368_1134763	Ga0138368_11347631	F060046	LLSVLLKLANKIRINKEVTKGTKGIRVVEFMKFPTEIICI*
Ga0138368_1135779	Ga0138368_11357791	F081236	SSQKVAAATNSEYKALDAVPVNCDADTSDYNSDLPRWDPEYSQEEDFYNACYYSFRCCTTTGNGNGCYVSDNFGAMCRSCIKDNGPRFVKKACVDWLSDGDLTADQKAKWTMDDLINDNGVPPTKVPLYAVEFENYPGAPSEENGNVDTRSCWQPRGAADKQVIDYAEKCFEVLSWCNLLCPRDTPQTVDHVMCKHCTLFGFEAGFWDIDNFKAGLMAA*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300011309: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 Surf_A metaT (Metagenome Metatranscriptome) (version 2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences