Sample 3300011921

3300011921: Mine pit pond microbial communities from Vermont, USA - 2M

Overview

Basic Information
IMG/M Taxon OID	3300011921 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118613 \| Gp0137479 \| Ga0120089
Sample Name	Mine pit pond microbial communities from Vermont, USA - 2M
Sequencing Status	Permanent Draft
Sequencing Center	University of Vermont
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	62431253
Sequencing Scaffolds	65
Novel Protein Genes	81
Associated Families	73

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
Not Available	26
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Tetrabaenaceae → Tetrabaena → Tetrabaena socialis	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1
All Organisms → Viruses → Predicted Viral	4
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	2
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → Planctomyces bekefii	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Mine Pit Pond Microbial Communities From Vermont, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Geologic → Mine → Unclassified → Mine Pit Pond → Mine Pit Pond Microbial Communities From Vermont, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → mine → alkaline water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Vermont
Coordinates	Lat. (^o)	43.727094	Long. (^o)	-72.425964	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000141	Metagenome / Metatranscriptome	1941	Y
F000220	Metagenome / Metatranscriptome	1544	Y
F000340	Metagenome / Metatranscriptome	1267	Y
F002085	Metagenome / Metatranscriptome	595	Y
F002098	Metagenome / Metatranscriptome	593	Y
F002597	Metagenome / Metatranscriptome	544	Y
F002689	Metagenome / Metatranscriptome	536	Y
F002934	Metagenome / Metatranscriptome	519	Y
F003266	Metagenome / Metatranscriptome	496	Y
F003378	Metagenome / Metatranscriptome	490	Y
F004092	Metagenome / Metatranscriptome	453	Y
F004276	Metagenome / Metatranscriptome	445	Y
F004639	Metagenome / Metatranscriptome	429	Y
F004759	Metagenome / Metatranscriptome	424	Y
F004997	Metagenome / Metatranscriptome	415	Y
F006069	Metagenome / Metatranscriptome	382	Y
F006385	Metagenome / Metatranscriptome	374	Y
F008879	Metagenome / Metatranscriptome	326	Y
F010602	Metagenome / Metatranscriptome	301	Y
F011148	Metagenome / Metatranscriptome	294	Y
F013062	Metagenome / Metatranscriptome	274	Y
F013252	Metagenome	273	Y
F013634	Metagenome / Metatranscriptome	269	Y
F013758	Metagenome	268	Y
F014107	Metagenome / Metatranscriptome	265	Y
F014116	Metagenome / Metatranscriptome	265	Y
F014503	Metagenome / Metatranscriptome	262	Y
F016501	Metagenome / Metatranscriptome	246	Y
F017791	Metagenome / Metatranscriptome	238	Y
F017999	Metagenome	237	N
F021112	Metagenome	220	Y
F021733	Metagenome / Metatranscriptome	217	Y
F022814	Metagenome	212	Y
F024318	Metagenome	206	Y
F025485	Metagenome / Metatranscriptome	201	Y
F026214	Metagenome / Metatranscriptome	198	Y
F029417	Metagenome / Metatranscriptome	188	Y
F029442	Metagenome	188	Y
F031456	Metagenome / Metatranscriptome	182	Y
F031484	Metagenome / Metatranscriptome	182	Y
F034113	Metagenome / Metatranscriptome	175	Y
F035651	Metagenome	171	Y
F036704	Metagenome	169	Y
F039630	Metagenome / Metatranscriptome	163	N
F040943	Metagenome / Metatranscriptome	161	Y
F042750	Metagenome / Metatranscriptome	157	Y
F046330	Metagenome	151	Y
F048933	Metagenome / Metatranscriptome	147	Y
F049637	Metagenome / Metatranscriptome	146	N
F051758	Metagenome / Metatranscriptome	143	N
F054589	Metagenome / Metatranscriptome	139	Y
F057732	Metagenome / Metatranscriptome	136	Y
F058556	Metagenome	135	Y
F058680	Metagenome	134	Y
F058744	Metagenome / Metatranscriptome	134	Y
F060861	Metagenome / Metatranscriptome	132	N
F063624	Metagenome	129	Y
F065419	Metagenome	127	Y
F065715	Metagenome / Metatranscriptome	127	Y
F068601	Metagenome	124	Y
F069495	Metagenome / Metatranscriptome	124	Y
F071020	Metagenome / Metatranscriptome	122	Y
F071232	Metagenome	122	Y
F074505	Metagenome / Metatranscriptome	119	N
F076076	Metagenome / Metatranscriptome	118	Y
F076884	Metagenome	117	N
F083731	Metagenome	112	Y
F087106	Metagenome / Metatranscriptome	110	Y
F089589	Metagenome	109	Y
F093347	Metagenome / Metatranscriptome	106	Y
F096673	Metagenome	104	Y
F096715	Metagenome / Metatranscriptome	104	N
F103147	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0120089_100039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	130950	Open in IMG/M
Ga0120089_100070	Not Available	62653	Open in IMG/M
Ga0120089_100146	Not Available	26484	Open in IMG/M
Ga0120089_100179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22263	Open in IMG/M
Ga0120089_100212	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Tetrabaenaceae → Tetrabaena → Tetrabaena socialis	19270	Open in IMG/M
Ga0120089_100319	Not Available	13492	Open in IMG/M
Ga0120089_100329	Not Available	13255	Open in IMG/M
Ga0120089_100629	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7508	Open in IMG/M
Ga0120089_100883	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5519	Open in IMG/M
Ga0120089_100921	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5358	Open in IMG/M
Ga0120089_100932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	5306	Open in IMG/M
Ga0120089_100942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5256	Open in IMG/M
Ga0120089_100971	Not Available	5082	Open in IMG/M
Ga0120089_101170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli	4306	Open in IMG/M
Ga0120089_101252	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4037	Open in IMG/M
Ga0120089_101254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4036	Open in IMG/M
Ga0120089_101328	All Organisms → Viruses → Predicted Viral	3838	Open in IMG/M
Ga0120089_101329	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3835	Open in IMG/M
Ga0120089_101414	Not Available	3614	Open in IMG/M
Ga0120089_101427	All Organisms → cellular organisms → Bacteria → Proteobacteria	3590	Open in IMG/M
Ga0120089_101595	Not Available	3213	Open in IMG/M
Ga0120089_101846	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2833	Open in IMG/M
Ga0120089_101875	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	2789	Open in IMG/M
Ga0120089_102037	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2592	Open in IMG/M
Ga0120089_102062	All Organisms → cellular organisms → Bacteria	2571	Open in IMG/M
Ga0120089_102116	Not Available	2518	Open in IMG/M
Ga0120089_102216	Not Available	2409	Open in IMG/M
Ga0120089_102218	All Organisms → Viruses → Predicted Viral	2407	Open in IMG/M
Ga0120089_102445	Not Available	2227	Open in IMG/M
Ga0120089_102789	All Organisms → Viruses → Predicted Viral	1998	Open in IMG/M
Ga0120089_103334	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1726	Open in IMG/M
Ga0120089_103714	All Organisms → cellular organisms → Bacteria → Proteobacteria	1589	Open in IMG/M
Ga0120089_103737	Not Available	1581	Open in IMG/M
Ga0120089_103867	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1546	Open in IMG/M
Ga0120089_103987	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1507	Open in IMG/M
Ga0120089_104009	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1500	Open in IMG/M
Ga0120089_104112	All Organisms → Viruses	1474	Open in IMG/M
Ga0120089_104383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1406	Open in IMG/M
Ga0120089_104453	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1389	Open in IMG/M
Ga0120089_104602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1358	Open in IMG/M
Ga0120089_104632	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1353	Open in IMG/M
Ga0120089_105029	All Organisms → Viruses → Predicted Viral	1279	Open in IMG/M
Ga0120089_105756	Not Available	1169	Open in IMG/M
Ga0120089_105917	Not Available	1150	Open in IMG/M
Ga0120089_106476	Not Available	1084	Open in IMG/M
Ga0120089_106780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1053	Open in IMG/M
Ga0120089_106898	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1042	Open in IMG/M
Ga0120089_106934	Not Available	1038	Open in IMG/M
Ga0120089_107942	Not Available	945	Open in IMG/M
Ga0120089_108591	Not Available	895	Open in IMG/M
Ga0120089_108627	Not Available	892	Open in IMG/M
Ga0120089_108841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	878	Open in IMG/M
Ga0120089_109331	Not Available	849	Open in IMG/M
Ga0120089_109635	Not Available	830	Open in IMG/M
Ga0120089_112290	Not Available	707	Open in IMG/M
Ga0120089_112591	Not Available	697	Open in IMG/M
Ga0120089_113202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	675	Open in IMG/M
Ga0120089_113503	Not Available	666	Open in IMG/M
Ga0120089_114105	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Planctomyces → Planctomyces bekefii	648	Open in IMG/M
Ga0120089_114112	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	648	Open in IMG/M
Ga0120089_115299	Not Available	615	Open in IMG/M
Ga0120089_117044	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	573	Open in IMG/M
Ga0120089_118090	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	551	Open in IMG/M
Ga0120089_118222	Not Available	548	Open in IMG/M
Ga0120089_119748	Not Available	520	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0120089_100039	Ga0120089_10003969	F096715	MIKKYKLEDLLIQSDASALRPAEDTEWLSHSNQGRELLAQIDQTMMRVKSGKEKVYSSAAIRKKLGLDDQNDAAGFGGLIPPPK*
Ga0120089_100070	Ga0120089_10007064	F008879	MFKKGDVVKVKTVVPQGPVKALRMDEDGNVYCLIEWTDVNGETQERWIDESLLTSGD*
Ga0120089_100146	Ga0120089_10014619	F096673	MSFEIMQHNGMKIIQYFFSMDELIKSMLNNPKDRYWRIK*
Ga0120089_100179	Ga0120089_10017936	F003378	MTTDMPIKQNGTIAKGLDLGQRLFSLFLARALPAVTGGALIGVSVAKAAILAGAMAVLEVVQKLASASTDGELTTDEIKTAFSNGKK*
Ga0120089_100212	Ga0120089_1002129	F006069	MVVIETKMHGFDGKLKYDKLNYPQCSCGKCFKMYFNSLHIGARQSGKTYLVVKTIKHYETNKIMKDGVEYKLRTHLISPTIQANEIYQSLNSLDMKKDAHEDYSDKLLIDIIDDIKAKKVKYDEYLLYKKYYEKVMKTPENKLETLYEKEPELFNLLEKYEYQNPKEVEHEPPAVNIVILDDLLGSDAFSKKTKSVLTNAMIKNRHIGVVFMVLVQSIRAVPKNIRLNCSVFQLATFKNKKIILEDIYEEVSNVINIDDFEELYDHATAKPYGSLIIDTTNGKRFLSNLDFELSLK*
Ga0120089_100254	Ga0120089_1002544	F000141	MHTRFKCNGCNRDTEFLWLNKIDTPEGFRPYQCMDCGCVGVKNIAEATNIPESDISRCDKCGSWKFNTVVCHTCQLIGAK*
Ga0120089_100319	Ga0120089_10031919	F029442	MKNTRMKIIFDHLHGHVKDDRVFCEAFVIPEGETEEELLGLGFLPNIQPPIYWYQAKSCRINNEKVVLSYKRKKLLSQLEIEIIPYVDNKEDVDLFFQDYFKWKKFDIMEYYNNNSNHSDLKIMKVKLDNVVVAYTRFKEFENVLLGLETAFINTELKFSFGKDSILLLSNYGKTQDKNYLYIYESYQDYFPYKLEIIGAEFWEGEKWIDPTIYNHD*
Ga0120089_100329	Ga0120089_10032913	F006069	MVVVETKLDGFNHKLSYDKLNYPQCSCGKCPRFYWNMMNIGARGSGKTYTIVQMIKHYEKNKIMKDGVRYKLRTHLISPTIQANEIYQSLDSLDLDKDGHENYSDKLLLDIIADIKDKKEKYEDYLLYKKYYEKVMRTPESKLEKLYDENPDMFDLLERYNYQHPSELEHSEPELNIIILDDLVGSDAFTRKTKSTLVNAMIKNRHMGICFALLVQSIRAVPKNIRLNCSVFQLATFKNKRMILEDIYEEISNVIGIEDFEELYDYATAKPYGSLIIDTTNGKRFLSNLDSELSLSAK*
Ga0120089_100403	Ga0120089_1004034	F093347	MKQKKLIAELYRACFDHDAKKMAELRKEEFQKILKRKAEGKHFTHRWTVVQI*
Ga0120089_100629	Ga0120089_10062910	F014503	VRVSIQHWRFEDGSTVPNPGSRWETEPPPRGWYCWVYPIDDHEFEIWMARHCXXXXADYTHRFNSGNPMWTVYIKNDAEATLFTLKWL*
Ga0120089_100883	Ga0120089_1008833	F065715	MYKAQFKRSSPYESWTTIGHYGNEQSAMAAALQYKNKGMIMVRVTDKKGSVVYTG*
Ga0120089_100883	Ga0120089_1008838	F069495	MAKITLEELCDIAFAVEEGDPFDWGVFKQGQEEAMKMIGASVLEMFDKDSYTSEEKLIMLATITKLTTENMILHSKLLTNSQKDV*
Ga0120089_100921	Ga0120089_10092117	F068601	VRTNESLENIVELSDIREGRLRALSPYGPVKAGLTTLPTTNEVRLMELLNSLENVVHDLNYKSFTAYDTLNTAIQGVRAALSVTLIEEGGTDAELDPE*
Ga0120089_100932	Ga0120089_1009324	F029417	MVVTIEIIKEAPSADQKSSTSSALLHLAVSINIAALITKENNPRESKIAGRVSNLTIDPITPLIRPNNNATQRYVQAPPLTVNPVTKVVAAQKASAPAIRRTIKFTY*
Ga0120089_100942	Ga0120089_1009425	F013758	MTAWTPTYKVLVNSVEITDVTIANLVVTSGRTDIYEQPVAGYCQLQLINFNNSSYNFTVGTSITVEVTNSSGTYVPIFGGRISDFTISVNRAGSLGYTTACTITALGALSKLPKIIDNAVLSTDQDGDQIYTLLSQYLLGSWNDVPASETWATYNPTETWANAVNIGLGEIDQPGDYEMIARSSSPTDLYSICSEIANSAFGYLYEDANGNIGYADSTHRQDYLAANGYTTLDANHANGIGLAATTRAGDLRNYYQLTYGTSGSGSYTAQDTDSQATYGVYGESFTSRIKNAGDAASLAERYIDLRANPYPKFQSITFTLGNPEIDNADRDALLNIFMGQPVWIQNLPGNITDGSFQGYVEGWTFRASLNNLTVTFNATPINFSQVTVKWEQVSATELWNTLSPTLTWNNAIGVVA*
Ga0120089_100971	Ga0120089_1009715	F016501	MRFFEFADSDAGLDKFVIILRNFVGRAASKKSPASMNWASLQKIAQDSGFEFAADYETFKSIYDSSPAIQNLVKNFNDRGIELNVPGAPDEEPKGDGTKTPQDSQAAVDKIAASAAPQQLGQS*
Ga0120089_101170	Ga0120089_1011705	F031456	MAFIGNFPASGSAVFNLDFLPEYVLVDSANQATQSLSNFSVVTSGVQLMSITNVNRLTALAKFDSGAILDDFVGTELSRTSSYIKLATGRINKTTTITGTNGVALARAFYAASTNISNVARRAVEQSINPSANATFDNFEALFFDETNILRAQITFANGFTDEFTTVELRALYSTYHVSDESSLLSGLVCIDADSGAGLISQVVLFNGAGGSTVVLKSDYVQL*
Ga0120089_101170	Ga0120089_1011706	F013634	MSNCNKNQNMAIQLAPLVGAGLGALQQSKIEKALAGEKTYTKPKTIFGKLIGGVSGRTAAAEASAQTKTAPLNEKVMNSLQPSAKSTPVSGGISFGGEASRKTYLPFAIVAAVIAAFYFMRKKGGRRRR*
Ga0120089_101170	Ga0120089_1011708	F025485	MENVRKFLPLIIGGIVAIAFFFISRKVRQGSGNSQERSEILEKAREAKLAKSILKKSENEESTSNIES*
Ga0120089_101252	Ga0120089_1012524	F021112	VTCNICHKTTQNEGACWSCRLKLQSHLIELPELQSSAGEFIAPSRTGSGAVSAERSIGVNVSALDFSMATELLAILHGWEAMVREARKLTPPALLKKAATTEAEVKATCDFHLSHLDWIIGQDWVRDFAGEVAELHAKGMAAAKRFTEQPRRIPCPTDDCKKFVVIDVVKVKENGLADEVTCFGCRQSWSLIRLVTLAMSNPTRKFFLDVEAIALWLGIKPRQVYAIIKENGIQKQSGNLYSLGDVINARN*
Ga0120089_101254	Ga0120089_1012546	F002689	MTTIDATEARLSTHEEVCALRYQVINARLKRMEGIMITCAGAMILSMAGAVFTLITHTK*
Ga0120089_101328	Ga0120089_1013289	F002098	MGYKKGADGITKTGKTEGKNLGDSGPSIGIEKGPKKSTSMLNKNMKLMGRNLAKIANQKKSGRGR*
Ga0120089_101329	Ga0120089_10132911	F002934	AVGAFLEVWGTTSNFELNYRSILGAVVAGVFGYATPKK*
Ga0120089_101329	Ga0120089_1013293	F004639	MGHLQFLNQDGEWETFPSPEQEANLRANAEVLEELGYKLICQLCNQFPSAVQIKDRYQKQEWTCEKCHTINSAGKA*
Ga0120089_101414	Ga0120089_1014146	F076076	MADLYGVALGGGVTGNVDTNARKLLGDGTAGVGPYTRFGTPQLQALKIISATINFTTTPTAANSNLYKAVTALQDLAEVYYVGVPTASGANQFIALVHLNKTDIGDGFGSTSSADGSYENIEDEIRAALGTAENDVTVTNSTLTGLSFN*
Ga0120089_101427	Ga0120089_1014275	F011148	VGEWSATPQIPRIGEIMAVFNKNTLTQISGFDNQIIAGELVWNQNTYWNLTLNDSDGVPLNLTNASIDAQIIRRTLTNVKDSRYGLTFDIGDYTPTPTAIPLTITNKDNLTGTFTLIIEDNAWGLIANQPELDINSVNGAGFSGRIKVSFPSIGSTPANDKIIFLLF
Ga0120089_101595	Ga0120089_1015952	F076884	MYSEDDEGDETLKKDMLLRQAKVLYPELEEWLLEMAVNMHIAQEKENDKVKITDLTINDDY*
Ga0120089_101846	Ga0120089_1018467	F026214	MVHLSSTKGKANMAKNYKDYAYFENRPDVVKVFDDLEAYHNYCRIELCEFDAADLYRRDSVNYSAYLASKRPRRPYQGKNPRWENNGKRNEQRFSR*
Ga0120089_101875	Ga0120089_1018751	F014116	VAENSADIAKRIILGCVAEGMTIDAACGSAGKSMKTYEYYRRTDKIFADKVDRTRL
Ga0120089_102037	Ga0120089_1020376	F089589	MTTQRLWVSDNGDVTCEPHSGAYLRCAIEAKPIAKKHRTPLGNWSLYFTHLLGGENLVCETCVPWDSPEHPFNKIKAGA*
Ga0120089_102062	Ga0120089_1020627	F039630	MFHPFEGDLTQLKDQEIENKLIELNKKYYTAARIGSRDLLTQLSTFITIYREELSKRHSRKLKDGNDDLDQLINVD*
Ga0120089_102065	Ga0120089_1020653	F103147	MSAEELGRRAIERIGELRDRATEYTLNARFRPSSFGDKHIPAMTAEEIALQVLEGNALVRAYTAAIGAINEEYKRMMQPDDDKKPEPIKGSMY*
Ga0120089_102116	Ga0120089_1021167	F006385	MTLDTGTIIAITIALAGSVGMMIAFWKHNIKLEKEIRRLQVALRTERLKK*
Ga0120089_102216	Ga0120089_1022163	F046330	MAKGGKTNDQMLKLGRNLAKVANQKSGKKPIKDMGKVNKNG*
Ga0120089_102218	Ga0120089_1022183	F087106	MAANENTKFQINYKLSDGTLINLYATDVKDLETGLTDLSMVAALIKSTSSELSGGNATAAAVTNIQAAFNATPVNPLDDRANPAAQPGTKQCRHGVMAFKTGTSARGPWQGYMCAAPK
Ga0120089_102445	Ga0120089_1024452	F051758	LCCRGSQKYNHEWGLQQLREVWTKTFKSSAAAEDDVQEDDVEMTVEGGASSAGDPADEDPFEKQMRLSYESQARASTVRRYGKPQALDQLEEWMKENPIPYISNDKFSQEGIFDYWAGRLPGHAHVNQTYPDVVRMWRQFHGCPASGGGIERVFFSAGKQHDALKKRTMDKTLESTMKASINTKLPTCDDKGVFTDDDDTYRKRK*
Ga0120089_102789	Ga0120089_1027891	F006069	MIKHYEKHKIMKDGTEYKIRTHLISPTIQANEIYQSLDSLDMEKDAHDEYNDELLLNIIEDIKAEKKEYEKYLLYKEYYEKFMKTPESKLEKLYYENPEIFQLLEEHEYIHPKDFKHEPPKVSIVILDDLLGSDAFTKKTKSVLVNAMIKNRHMGICFAVLVQSIKAVPKNIRLNCSVFQLASFKNKKVILEDIYDEVSNVIGLDEFEELYDFATDKPYGSLIIDTTNGKRFLSNLDSELFLQNKNVV*
Ga0120089_103334	Ga0120089_1033342	F071020	MNVTNVRAGLKTRLATITGLRVWDSIPDQVTPPGAVVGQLDFTFDIDNARGLDIANVDVYVIV*
Ga0120089_103450	Ga0120089_1034502	F004759	MDKKDLAQDKKMIKAAVGKHEKNMHPGKKPTKLSKGGVTNDSLKAQGRNMARASNQRGG*
Ga0120089_103714	Ga0120089_1037141	F096673	TNAMSFEIIQADGMRCIQWFFNTDELIKSMLNNPNDRYWRIG*
Ga0120089_103737	Ga0120089_1037375	F031484	MNTTKLLAIATTYARAAVPAVAALYMSGVTDPKTLAYAFITAFIAPIWKSLDPKATEFGRGAK*
Ga0120089_103867	Ga0120089_1038671	F054589	MKAMDLDYDMLLSAALLMESEGGSFAGHIARAFYVADTTNRERLLVAFDDLFCKFYRQHRMDQLYKGEM*
Ga0120089_103987	Ga0120089_1039873	F042750	VIDQEIIHGHMSDCALHEDGPCTCGTDEILEELALEEEGLTIK*
Ga0120089_103987	Ga0120089_1039876	F003266	SPLAKLRHWRDGNADMTNAQDTVKNTLDVLSVVATIGSFLQMLTPIFGLIGAVWTVMRITEMIAGKPFAEIIRRKKPDAIDQ*
Ga0120089_104009	Ga0120089_1040093	F068601	VRTNESQENIVELSDIREEKLRALSPYGPVKAGLTTLPTTNEVRLMELLNSLENVVHDLNYKSFTAYDTLNTAIQGVRAALSDIATDDRGTNE*
Ga0120089_104112	Ga0120089_1041122	F004276	MLLNEMFSPIGAPKDDQNEVDWLDDLHFFIDNDDAMLNQYFFPAVKRHKEHQGNPNVFKVYIRPIEHCLNHYCEKYDIDDRAEKFPKEKIIELAKRFALEQTKFLEKGDYAA*
Ga0120089_104383	Ga0120089_1043832	F034113	MAITPSYKAEGTEEHYINKGAVTTPQTNPMVEAKYAAGKAQAAATDKVEWPTKVAGRTN*
Ga0120089_104453	Ga0120089_1044531	F071232	ADVLRGSGSTVTIPVHRNLITTVTSPINAVIGQYGTTVSMGGNTYTGTTFQVVLRDYPTYTLIPMTNDSFIEWSGTFKAFESVL*
Ga0120089_104453	Ga0120089_1044532	F002085	MNVITPVENTNNIRYADFVRVTTPSAVYRFATTPAPITVPAVDAQPFNAVSVLMKVGDTQRDIKSTANETTFTLVGIDTAMLGWVLGNQIKGSQIEAWKGFFDTDGALITTGGTGGLYQFFNGYINSFSIQEEWMEELRQFVGVISVAASSIQLILKNRTAGRYTNDNNWQFFAPNDTSMNRVPFITNINYNFGKDAPANS*
Ga0120089_104602	Ga0120089_1046022	F058680	MSKHDQAEVDAAVAEFLANGGKITQCEYGVSGRAEGASYSQWSKKKPSTSPLASPPEEDE
Ga0120089_104632	Ga0120089_1046321	F017999	MTFDYHKAMAEGHGYNHYVADLLRQYGVPKVDVPEFSIATTHDAIKDKTENEKDIVVDNLILEVKSRALSFRDQDDFPHSLILVDTVYGFDQKLIKPFAYVYMSQVTKGVFAIPVSTRQFWTIATIYDQARQIEVECFFVSKRHCRPFLELVDVLLERAAQEAEPTCE*
Ga0120089_104632	Ga0120089_1046322	F060861	LAIAEINLDKGIVIFKGSVYRDVNDAAPAVSNYAKGERDDYPAHMRKWYLEDTATSCIARCLTLLKGSNKTAPKESMVRATSWSVEPKIALDEALRSDTDVVPEIVMREVGTLPQQVCEDGTRMRFKEGISKTTQKPFKGYVCECGRGCPAKWASLSQNGTWYFKEVVSG*
Ga0120089_104909	Ga0120089_1049092	F000220	MSDEKPSDILSKVLFYVDSPFKLFALILMAVFAFAGYFVWQNQELLMGAYKESKKMPSIVEDRVEDAAAHLFKTTNATIVAVFKVNPMFGTRVLHRAYTKEGRDKTNDGLDVGLFTQNAANNADVVRLMASEIPCGEYRSAQSEMGLWYIAKGVTYTCRISIPPYPNRFVGQITVGWENEPTDIQVARTMMEIAATMLSRSKQ*
Ga0120089_105029	Ga0120089_1050293	F076884	MYLEDDEGDDALKRDMLLRQSRILYPELEGWVLEMAVNLHIAQENFNNKGKITEVE*
Ga0120089_105756	Ga0120089_1057564	F004092	MAEKDFSIYTGKFPCKKCNEEVSSLRLWSTSGDATWMCSSKHMSKVSLIPQKKKKKDFEDE*
Ga0120089_105917	Ga0120089_1059171	F010602	MIALHCNNKYKIYIIITMGIYDNGSIFGIRIYNFNDDDFANILFEKTYNEILSDEEKKEAYLFYTELNNKNEIRFQYYTHCSNTYGKGTYFNWYPLSVNLFLEKFGI*
Ga0120089_106476	Ga0120089_1064763	F058744	MFKLNDNISLNNIIRNHNISDVDPSIIKSACNLCTQEPPNFFMIDLKTINKKERFRKNFLEFLDLENLP*
Ga0120089_106780	Ga0120089_1067803	F000340	LKAVIPILVACIAWLLGQVGSFQERLTKIEGKMPALITSEGIPTDSPISADRRAKMREELYREIHDMHVRIKLLEEREKIGKK*
Ga0120089_106898	Ga0120089_1068981	F004997	LWFCEIRAREMLNYGQYATHHLKNPFLSRAELGKRVVVNIDELLAQQNQTFV*
Ga0120089_106898	Ga0120089_1068983	F034113	MAITPSYKAEDSEEYYINKGAVTTPQTNPMVESKYAAGKAQAAATDKVEWPTKVAGRT
Ga0120089_106934	Ga0120089_1069342	F076884	ETLKKDMLLRQARVLYPELEEWLLEMAVNMHIAQEKENEKVKITDLTINDDY*
Ga0120089_107125	Ga0120089_1071252	F004759	MKHDDAKADMKMDKVQDKKMIKSAVGKHEKNMHPGKKPTKLRAGGKTNSDMLKMGRGLAKIANQKSKG*
Ga0120089_107589	Ga0120089_1075892	F022814	MKLTPEVVKNLYASLYCCYPFTKWKMPLPEEIEFVVTADPELMGTYLLDTGGEYEHTVTISSGRCGHYYTMLTTLAHEMVHMSFYRQKGDKWMQHGK
Ga0120089_107942	Ga0120089_1079422	F017791	MYTLVGIQKLSETQKSRLRNGHPVRIKKGSGNQLHLTNEQIKKLESAARKGAAYTLTLHPEQAEKHGSGFFGDIASKAKAFARKHKDLINPIVGRVRAGAKSGIDKLASKANEKVDEYIKPIEGEGIIGDALKGLISMTGLGMKKKRGRPKKKLTEVVDNKVRVRKGKGI*
Ga0120089_108591	Ga0120089_1085915	F058556	GARPMSHFVVEHIYNGYPMFETLTGVEDVDLNLFPGFQTVWVCDSLEEVTAVENELRRKHNARRSQ*
Ga0120089_108627	Ga0120089_1086272	F035651	VSYYDADSWANHAFNFIDCAECGSEFDQQDQEGGNICPTCIDKEEGENK*
Ga0120089_108841	Ga0120089_1088411	F014107	MSLSLILANSESVGINDQRFVGQVVSRNQRISTSEILTVVPFAFEMKPMNYLLYSKSRALLNSLRIPDKALQQYINFGSTGWINYIAYQGDMTSGQIATCQWQTNSSNKNLVLGNLPSISSSLYIVKAGDFCQVGLYSYIATA
Ga0120089_109331	Ga0120089_1093313	F021733	CLPEFPSAGGAGTDAQTVAFTFKVSKGAVTETFS*
Ga0120089_109635	Ga0120089_1096351	F024318	MIPYLYLGKFIKRPGDLAPKGVKSTCQTEKLPFNETFEKIWQLVSMKA*
Ga0120089_112290	Ga0120089_1122902	F057732	MRDTMRDLLSKLDQLVSETALNPDNPKDDYQAKSNALDNLESDPVASKDSKISSAIDQRRADLDKEAKAAGVFEMGDEFGISFSEDHEIATE
Ga0120089_112591	Ga0120089_1125911	F013252	MADNNLKGFRQTYQETGNISSGGGPGDKKLDKGASGSKRASNAVKGKPARSSKVGPDKNLKDVKTGNFY*
Ga0120089_112839	Ga0120089_1128391	F013062	LPAAFTEWAPLAQDRAGWRKLVTKPPFKLGKPFVRQPRGDTRVTPEDKLRLAKERAAEIAKRRADFNATNN*
Ga0120089_113202	Ga0120089_1132021	F063624	AGCQMLSEGKAEIGKFKKQVEGGVADAKAIYAEVTGLWGWVKGLFGAPKKPVERAVVQPTKPDVALTSEGNTTKSSKKTPEPELSYEEFQARAVHDICENLKVYFEAVRQLKIHCRELEEEALTTDKVADSAIDRIEIQWQMQQLSAQLRQSMIYGTPQDLGLGAMYQEFLAKQEEIVEEQEVARELKLKKERDTAWQHEHREKILVAKLMYAVVVAIVMLELIG
Ga0120089_113503	Ga0120089_1135031	F083731	MNLKQLLKHAGVSNNIIKEIEKKTAKTSAQMEQEHQEKALAMTKMILNDALRYRKEHGGNTPPSAPKKTIIVPDDM*
Ga0120089_114105	Ga0120089_1141051	F048933	SGKATLSGAATYVGVSAVESAVLAVSVEVFQSRIAPGGQIEGVDFTNVSPYRLGRSLFNRVSGLLGAYIDTDSMVQ*
Ga0120089_114112	Ga0120089_1141123	F002597	PRFHTFDSWASLMCELYAPQQLEIPSAQTDWKVWGNGIKAIDVFTNEAIPSTDNYEDWQVWAEALVNAVNPAT*
Ga0120089_115299	Ga0120089_1152991	F049637	MNVLKSDELGVPSTFLAIFANVTAMAGLQMVNVVFTSVISILSIIYLVYKIRGEIKKSNGKG*
Ga0120089_117044	Ga0120089_1170441	F074505	MPTTARANRTDGDAEAGAAEAEKCKKARVTLPVLSVLQTVLQHAAEALADKTKELSDVLGSINNDQLVAEPDVWLQPHPQRTRRRTADGSRTAQIASHGRLTACRSRLMRYPDRADDRRASLFLRRGALCILACVVPGILCA*
Ga0120089_118090	Ga0120089_1180901	F040943	MGYKSKTCPKCAVVHNKRGEFCSRSCGNQKKHKPETKALLSQKQTEWLTSNTDEAEVAKHNFISKRINGDPDPVAPVRDNMGSGRFVQDGDLWEEV*
Ga0120089_118222	Ga0120089_1182222	F036704	MWIEIDVMLGGSTMDWAELGLEVKHEFVRRMVRVEDIAYVQELVHDIQVIYFYDKTSCLLRGSYTEIRDELLHLDQEGQLD*
Ga0120089_119748	Ga0120089_1197481	F065419	VNALNARIQQFCIEKGMYLTDGSGNNVYYVSVSPNSTAYANQIITKLIPLSLPTGYVQPTPFAGYATTTKRPPYIEILSNNFGKYLGFTAGNYGITKTADYNVLSNIIPQGSIVNSLLVKCSLVNNGCSNQSDILDAFAIGGSSGGTFGGNLNYTNNIEKWVRIAEGRYNNFI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300011921: Mine pit pond microbial communities from Vermont, USA - 2M

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences