Sample 3300012783

3300012783: Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES002 metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300012783 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0126301 \| Gp0177763 \| Ga0157524
Sample Name	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES002 metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	33791420
Sequencing Scaffolds	49
Novel Protein Genes	60
Associated Families	41

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	6
All Organisms → cellular organisms → Eukaryota	9
Not Available	20
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Aokuangvirus → Aokuangvirus SCBWM1	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	2
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities From Oligotrophic, Dystrophic, And Eutrophic Lakes In Wisonsin, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Oligotrophic, Dystrophic, And Eutrophic Lakes In Wisonsin, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → oligotrophic lake → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Wisconsin
Coordinates	Lat. (^o)	46.008	Long. (^o)	-89.701	Alt. (m)	N/A	Depth (m)	4
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000121	Metatranscriptome	2072	Y
F000191	Metagenome / Metatranscriptome	1666	Y
F000237	Metagenome / Metatranscriptome	1498	Y
F001145	Metagenome / Metatranscriptome	765	Y
F001219	Metagenome / Metatranscriptome	744	Y
F001583	Metagenome / Metatranscriptome	668	Y
F003666	Metagenome / Metatranscriptome	474	Y
F004777	Metagenome / Metatranscriptome	423	Y
F005239	Metagenome / Metatranscriptome	407	Y
F005505	Metagenome / Metatranscriptome	398	Y
F005668	Metagenome / Metatranscriptome	393	Y
F007463	Metagenome / Metatranscriptome	350	Y
F007472	Metagenome / Metatranscriptome	350	N
F007736	Metagenome / Metatranscriptome	345	Y
F015184	Metagenome / Metatranscriptome	256	Y
F015857	Metagenome / Metatranscriptome	251	Y
F016362	Metagenome / Metatranscriptome	247	Y
F016926	Metagenome / Metatranscriptome	243	Y
F017830	Metagenome / Metatranscriptome	238	Y
F018379	Metagenome / Metatranscriptome	235	Y
F024466	Metagenome / Metatranscriptome	205	Y
F030329	Metagenome / Metatranscriptome	185	Y
F036600	Metagenome / Metatranscriptome	169	Y
F037232	Metagenome / Metatranscriptome	168	Y
F039008	Metagenome / Metatranscriptome	164	N
F041199	Metagenome / Metatranscriptome	160	Y
F043769	Metagenome / Metatranscriptome	155	Y
F044151	Metagenome / Metatranscriptome	155	Y
F048237	Metagenome / Metatranscriptome	148	N
F052605	Metagenome / Metatranscriptome	142	Y
F053251	Metagenome / Metatranscriptome	141	N
F054515	Metagenome / Metatranscriptome	139	Y
F055363	Metagenome / Metatranscriptome	138	Y
F057919	Metagenome / Metatranscriptome	135	Y
F068493	Metagenome / Metatranscriptome	124	N
F074330	Metagenome / Metatranscriptome	119	N
F082135	Metagenome / Metatranscriptome	113	N
F088161	Metagenome / Metatranscriptome	109	N
F090311	Metagenome / Metatranscriptome	108	N
F091400	Metagenome / Metatranscriptome	107	N
F102393	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0157524_101328	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1540	Open in IMG/M
Ga0157524_103353	All Organisms → cellular organisms → Eukaryota	695	Open in IMG/M
Ga0157524_103593	Not Available	501	Open in IMG/M
Ga0157524_103641	Not Available	717	Open in IMG/M
Ga0157524_103933	Not Available	795	Open in IMG/M
Ga0157524_104053	Not Available	832	Open in IMG/M
Ga0157524_104328	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	703	Open in IMG/M
Ga0157524_106967	All Organisms → cellular organisms → Eukaryota	574	Open in IMG/M
Ga0157524_107374	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	694	Open in IMG/M
Ga0157524_108289	Not Available	798	Open in IMG/M
Ga0157524_110198	All Organisms → cellular organisms → Eukaryota	648	Open in IMG/M
Ga0157524_111529	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	590	Open in IMG/M
Ga0157524_113695	Not Available	611	Open in IMG/M
Ga0157524_113955	Not Available	564	Open in IMG/M
Ga0157524_113965	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	905	Open in IMG/M
Ga0157524_114902	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	978	Open in IMG/M
Ga0157524_117824	Not Available	521	Open in IMG/M
Ga0157524_118066	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	553	Open in IMG/M
Ga0157524_121432	All Organisms → cellular organisms → Eukaryota	676	Open in IMG/M
Ga0157524_122466	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Aokuangvirus → Aokuangvirus SCBWM1	633	Open in IMG/M
Ga0157524_124986	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	647	Open in IMG/M
Ga0157524_125835	Not Available	733	Open in IMG/M
Ga0157524_127007	Not Available	625	Open in IMG/M
Ga0157524_127261	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	534	Open in IMG/M
Ga0157524_127702	Not Available	907	Open in IMG/M
Ga0157524_132886	All Organisms → cellular organisms → Eukaryota → Sar	1097	Open in IMG/M
Ga0157524_132915	All Organisms → Viruses → Predicted Viral	4796	Open in IMG/M
Ga0157524_133512	Not Available	650	Open in IMG/M
Ga0157524_134316	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
Ga0157524_136406	All Organisms → cellular organisms → Eukaryota	500	Open in IMG/M
Ga0157524_138508	Not Available	743	Open in IMG/M
Ga0157524_138658	Not Available	640	Open in IMG/M
Ga0157524_139638	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata	698	Open in IMG/M
Ga0157524_139857	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2012	Open in IMG/M
Ga0157524_142200	Not Available	1372	Open in IMG/M
Ga0157524_143384	Not Available	738	Open in IMG/M
Ga0157524_143411	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	587	Open in IMG/M
Ga0157524_143811	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	627	Open in IMG/M
Ga0157524_144657	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	546	Open in IMG/M
Ga0157524_146524	Not Available	632	Open in IMG/M
Ga0157524_147639	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	638	Open in IMG/M
Ga0157524_148158	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	500	Open in IMG/M
Ga0157524_153057	All Organisms → cellular organisms → Eukaryota	1053	Open in IMG/M
Ga0157524_154473	Not Available	690	Open in IMG/M
Ga0157524_155258	Not Available	734	Open in IMG/M
Ga0157524_155307	All Organisms → cellular organisms → Eukaryota	533	Open in IMG/M
Ga0157524_157749	All Organisms → cellular organisms → Eukaryota	593	Open in IMG/M
Ga0157524_158766	Not Available	562	Open in IMG/M
Ga0157524_163933	All Organisms → cellular organisms → Eukaryota	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0157524_101328	Ga0157524_1013281	F102393	MILCCKPSKFNVICWSFLTLLSACVILACAVTALYASKGFKDATMCILTNMVDLTNSDITGGNMTDVPVKLDPRVLNVASAVIDWWMYAMIAPGAAYFVILVIAVFFSCVAALCSKCCASVTSKAFIFLGWFVAVVTLAFFCVCAVLGIFTQIPMTEAFWIENVESPCNTSVVESTHQFNLANASAQDCVRRYGQSNCAGSTQQLNNAAEQLTKFTLMCSCASAWLYKSKPLAAPGVVGALATLLAFFLSIGTCCTLVCCFSFTAAMEKNAPKKEKDKNFTGAKEMELVRH*
Ga0157524_101945	Ga0157524_1019451	F068493	MAAERSEFLRKLRKGLSRMVNRKVALGFDAWRAAVAPRDDHMSKALLHFLNRELSRGWVAWYTTWEVLRAKRESMRKSLSHMLNRGLSRGFGAWLEMAVERKAFLQQLRKGLSRMVNRKLALGFASWSEQTQGSAAMSKGLRHMMNRGLSKGWRAWQSMTEELKAKRESMRKSLGHMLNRGLSRAFGAWSEMAAERAEFLQKLRKGLSRMTNRKLTLGFD
Ga0157524_102409	Ga0157524_1024091	F000191	YTVGNLVNQHVRFIESGEKDPLMTYEKALITQSRPGEIPPID*
Ga0157524_103353	Ga0157524_1033531	F037232	SRGIMGAFKIFDVVSTVYGTGYISEVRSDCYLVLLTHWALAQGQSPKCFLQEDSIRLIPGALPGSTVKTFCGSAQIKQIRSTDAVHIARPINWKLANDSTATLYLAPEAVQLTQTAGFHEGDEVMTVYGQGFIESKREIQGDYVVKLRHWALAQGQSPTCYLQPSSLVKIPGFSVGAVAKTVWGLVRVLGIRRDGTHVCTAVHWSLANDTAPTCYLAPEAFALLSLKP*
Ga0157524_103593	Ga0157524_1035932	F018379	MKIGFIAIVGTASLVASADAGFLGFVALAKQSGANVLVDIYTGVGNASDKFLNVYNTNASTTAAGGFFQQAGLATKTWKPDAANFNSTRSSVDSFMTAGTYSGGAYGGEYYASTNTNGDPNFTGTSWNATPASAA
Ga0157524_103641	Ga0157524_1036411	F016926	PLALVVIVGTASAQVNYGNNQPPRDYLSKLLLVGNNPSQWTYEGSRSNANYWELPVGSNWQCKGDPNGPYGILAGAREFAKCVSAVSDWTGFFNALGSPTTTTDLDDWRAVCDCWGETLDDPTFSSPIKRHFADCFLDAVGGCGDGGAAAKARVDQQERAFLTVVLRTLGQAGDTDTVLRQRQTLLINLLASPQPVDVAGVHCRFTEPACVIVPPTPSPTQPPTTCTGVRRSTSSCMAQ
Ga0157524_103933	Ga0157524_1039331	F016926	PPLANISSMMLVPLALVVIVGTASAQVNYTYGNNDRRDYSAKFAQFFNVPSQWTHENGFSNYWALPLGSVWQCKGDLNGPFGIVAGAREFMKCVSGVSDWTDFFNKLASPTLYADYDDWRTVCDCWGDTLDDPTFTSPNKRHFADCFLDAVGGCGDGSFAARTKLDQQERNFLGLVLRTLGLADATNPTLYNQRQTLMINLLANPQPVDVPGMHCRFTEPACVVVVPTPSPTQPMCPCVEYRESCQTTPCSQQTATCGVSQARAG
Ga0157524_104053	Ga0157524_1040531	F016926	PPANISSMMLVPLALVVIVGTASAQVNYGNNERRDYSAKLLRDGIQTSLWTAETGNANYWALPQGSVWQCKGDNNGPYGILAGAREFAKCVSGVSDWTDFFNKLGSPTVTTDFDDWRAICDCWGDTTDDPLFNSPNKRHFADCFLDAVGGCGDGSATAKARLDAQERAFLTVVLRTIGQAGDTQAVLTQRQTLLINLLASQQQFDTVGVHCRFIEPACVVVVPTPSPTQPMCPCVEYRESCQTTPCSQQTATCGVSQARAGSRTTTCTCNKITGGN
Ga0157524_104328	Ga0157524_1043281	F001145	LNTNFLETNVVNILLLVALLVYGYKVSFSVSLDQRQKDIIQTIENAQKDVLNASNYYSLAEKGFTQSLFWLQNWKSLYEKNKIDIVNNKYKVVKNGLLETFSTTENLIKNFENKSFLALQRYMILITASRILRKFLSLSEAEKSKFVEVTISKLGGFNK*
Ga0157524_106644	Ga0157524_1066441	F000121	RVKPSKLQHVNLQSAFSSCPNMANQKHRGSILLLCLVPLIAFVCGLWSSSVASFVGLAGKVRSTRTVVHLGNGYLERMSPRDHDRPFSVSDATGATAEVTYKKRPFGIIRYSPGRNNIGAMVMEIIPKSRYPGDPQGQAFAAGVKSGWILKSINGQDVSGMEFAKIMDLLDDEVMDQRMSQHFYASQKAGRLAEPVDLPISVVYQEGG
Ga0157524_106967	Ga0157524_1069671	F004777	AGLERGGRGDLGVCFTSSWTSETALACRTNPFGDIFGSASVTVASVSGTGNPIFSFNAAVVSDVRLNAPHSGYASLTISGLEFGVGEHTATAGLERGGEGDLGVCFTSSWTSATTLACLSNPFADLFQAASVTVALVSGTGKPVFSFDAPASSFLLQPNLAMSGGYSVTVSGLNFGVGEHTVSGALASSF
Ga0157524_107374	Ga0157524_1073741	F082135	GIVASDFIYPHLIGTSPMSLGSMLRIPALLVPSAAAALLTSGASAALYQYSLSFANGFVADGQFSTKASAPASFVEKNPTITGETTGSWDFSTLTPAPYATTYLESQTLRVLQNGAVLDQSTTVLDGVCSDRFLYLNFSDLGTPAIAALDFSTVRPSATSYYFVSNGSNPSGNTVAFGSTGYNLFLFDVATSQGTYIGTATSLTVTAIPAPGALALLAAAGAGVGVGRRRR
Ga0157524_108289	Ga0157524_1082891	F052605	KRAAAGNSKVVRFRIIPGDWGKVRSGWLIWLLATERKFGEAEFTSSSGGVRTPSHANEGLGSKRR*
Ga0157524_109981	Ga0157524_1099811	F000191	TVGNLVNQHVRFIETGEKDPLMTYEKALITQSRALEIPELD*
Ga0157524_110198	Ga0157524_1101981	F007472	IQFGKMVYFTYKKLNICTVALLATVFAVLIAAMAVDWYQFKVEYSYTRISSTDSSLSSSLYNYTQTNFDMYGQTVQTQAANTKIVRTTQNTYSQLGASNVNQQFKIQQAFVLIALLVAGLLFVAHTLYFFDAFRNKILFFVGITALRTLLIIALLVVIASEVIAFLAFLGLSDKIASDNANCLSGPCQKFSDTVTTQLGQQNIAIGTEASVAVTLQ
Ga0157524_111529	Ga0157524_1115291	F007736	IVGDDRVGTEFKCRLSVPQAKAAFVNAQKETGGSVEDVSLDFDELLECIARCGVDKYRAVEQIKTGEKVAAMIANILGDLNEEQVITAATYITAERFSPGTSPPKGVAAENHKEWLTTWELLQLSTLPGFPLWEKEVYDLLALHLVELQSIFKAYASSSLQGSATDMDMEEFHDFVIEAGLITDLYGFDAMSGQFT
Ga0157524_113695	Ga0157524_1136951	F091400	ADEHADDSTWLCTPLHVCTQLAMAVLVPEPQELEQGVNGATLHEKVGQQGRAGHCSVLVVHVAPHIDKGTVEPLPGPETVVHVATLTLEPACPQVPEQEPWRLNVHEYSEQIGTVHGDVWVWQPPGQFDAAVCVEGPPHRFWAMHEEVERRTPVHVVGGCVGDGVGGTMTHAGSVNLQCTPGTSTGCGLASKFISKVCRCRKT
Ga0157524_113955	Ga0157524_1139551	F039008	PTPVYVPITQAPTMGFVPVTYGCVQAGTTACTAPSNCGAGTLTVTFRCQSSTGQDMSMSPQLCPGSCAAQQQPCQLAACPVVTAQPQFVVGINNTNYCPAGSSRILDEATCRAAAVARGAQFVEVENKAQFPAGCQTYRQNTNAAVQVYLNTHPTGAVDLNSAPLCRSGVRRSQHSTPELPQGPSTLL
Ga0157524_113965	Ga0157524_1139651	F090311	LSSLQPEGRAMRSALNTWAGVTMQRRSMVVAVASLIRGEQLWGLRTWSAHAALVRRQRERVEETARRAIKSMSLQSLRAAMNTWVAMSEARQRNQQALLSAASAFRGDGMRKAWNGWLGLLHDREVMASAVNCVSLRLQRAGFASWVSATEVSVTKQQLRACISSLSPATRSMRKAINSWIEYVYTIRALSRGAAAMRLREERVAFSTWHEHVWSEGERDAAMRRAVASMMQSSMRVSLNTWTSYAEEHAQASRVLAGALSSLQPEGRAMRSALNTLTGVMRQRRSMVVAVASLTNSEQL
Ga0157524_114902	Ga0157524_1149021	F055363	MAEEPGLAGVGIENAFDSPQTLTQCADFLRKHITENDYQSAMIVVRKGHMAFPLVWKDKGDKWPCDPKKDGVLMQLEARGARAMFFTELTKEKGKYSIGETHQIDADEFAMLPRLFG*
Ga0157524_117824	Ga0157524_1178241	F054515	LSIFFLVLVLAAFVTAVEKNELSTESKRTDVVGETFNIDGKPAMGAIAYGVASNGGYVLKDDSHYVKPEMVTKLPEKIPPPKGGPIEVVDEIPSVTDYYNGDAKLNKIQINCHIYANPTDCVHNSHCGWCGASKSCIVGNSVGPLESCVKSSYIFAAPRPSFNPHTRVINENV
Ga0157524_118066	Ga0157524_1180661	F005505	VNYFFFERNIAELDEIRFYGVAPHYFRPLMGLLVVSPTHYEGLMTGLFFFLLGFLPTFYNLYNTFNKYVCTIATQNSLIQTGAFILFMMSMYCVSSMLPCGRYYYEPEGGYVGNPVKFSYQYIYLYLGFVHHLDLLDHYIFQFSQTFVRKCSSYTTRRGELNTVVVEESKDSNDKNN
Ga0157524_119703	Ga0157524_1197032	F041199	MAFPTSAAIAKQAVQDVVDLVSVDGLPDDKYERRETLRFLAKSDSWVPTHCPETGVDLSTVDIVAHALTIYPDVIPASRMSVEARE
Ga0157524_121432	Ga0157524_1214321	F004777	MQLTVASFSGTGLSVFSFDAAVTSNVQGNAPHSGYASVTVSGLNFGVGDPTATAGLERGGGGDLGVCFTSSWTSATTLACLSNAFGDLFRSASVTVGGVSGTGRPVFSFDAAVVSDVELNAPPSGYASVTVSGLDFGVGEQTATAGLERGGRGD
Ga0157524_122466	Ga0157524_1224662	F048237	ENGILLFYSPNGPSDSVMPAGGANAATPAFAYTYQLTGTPAVRPEYYIRERRVVRAEITVERVVNLVGLGATGLIGSGAMITNILS*
Ga0157524_122617	Ga0157524_1226171	F001583	FCHESDSDSGEATYEDKSGSYISFYDAFLKEIQDAYTMFVFIYFLHHFNGSTVNYFFFERNISELDEIRFYGVAPHYFRPLMGLLVISPTHYEGLMMALFFVLLAFLPIIYNYNVYNKHVPTIPMQNSLIQTFAFITFMMSLFCSASMLPCGRYYYEPEGGYVGNP
Ga0157524_124986	Ga0157524_1249861	F005239	GTGLGFVGMSPNQPRPSRVVAHVSAGYLERQGPKDSDVPYKASDATGAEVAVEFKKRPFGILRYTPGEGGKGAMVQEVIGKSRYPGDPQGQGFAAGVQGGWVVKTINGADVLTEDFSKIMDILDDEVADPRFSKSVALALEKQGGRKAAPADVPISITYATIPGYEWKGEKLGADWEPAHR*
Ga0157524_125835	Ga0157524_1258351	F016926	ESGNARYWELPLGSVWQCKDMSPNNPYGIQAGAREFAKCVSGVSDWTDFFNKLGSPTVTTDFDDWRAVCDCWGDTTDDPTFTSPIKRHFADCFLDSVGGCGDGGDVAKQRLDTQERAFFSFVLRTLGQAGATDTVLRQRQTLLINLLASPQPVDVPGVHCRFTEPACVTASPTIFTTPAPVQPMCPCETYAISCTNTPCPTNSCGDAGVASRTCVCQKSSGGRVVGQADCCYCSGQGESCGSTP
Ga0157524_127007	Ga0157524_1270071	F039008	VNVPTPVYVPITQAPTMGFVPVTYGCVQAGTTACTAPSNCGPGFQTVTFRCLSSTGQDVPVQLCPGNCPAQQQTCQLAACPVVAAQPQFVLGVVNTNVCPFGSTRILDEATCRAAAIARGATFQQVETQAQYPVGCQIYQQPNAAATVYLNSHPTGASDANSAPLCRAGVRRSQHSAPELPQGPSTLLVALGAVVAIVAIVASAVVVF
Ga0157524_127261	Ga0157524_1272611	F017830	KDNHKNSMAGTTIIVNLKKGDEVVVYAYTGTWLADFPMNHYTHWVGLLLKPSEEEIDGFKKEANNCEENGVMVNGF*
Ga0157524_127702	Ga0157524_1277021	F007463	HDFCIEANLVTDMYGFDAMSGQFTKANAGSNDTVLELHEFLTMLVRISFFRANPQYGMRLGKDQKNADKFGEEVPLPGCLSDMLTNLVLPNARHDTYAQEFAETTLPLPEVQAALGAQLEKLSQFYELVSAGRPFLELDQWLKTLEGKLLFSDIMVDGYVVRLTEPQARAAFYASAATPSSGLLPDELPVCVARTACDKYKGVTPMGPGAKVTGFLANLLGDDDEEDVVLAATGGKALKD
Ga0157524_130905	Ga0157524_1309051	F043769	DEAGNGRNTANNSPMTTRAIELAPNANYKLFYTYDGVYGGEIARTAVPTVTERVGDMTGASGISEFIDVTSGTHAFGFEVLNAGPAGRLSVAYAPSLDANVQSSSDRISSGTLQTNATTAASGYSIGYSVTPGPVKIALGLTKIDQQHSTTAQDATSKTLGVTYTGSEFAIGAQRTK
Ga0157524_132886	Ga0157524_1328862	F001219	MNFSVSFFLNAGGLFDFDLTFAAEAVLFIILALVVTFCFISPISKQLDERADFINYTLRKSTILLTLGYEKLINSVGLLTEEIGEMNRQMKLTRSYVNSQFENEVLSAQKENSLLLSKLKGNLSIKSAYLFSNLSKDLVTITDKFFDKKFQSNS*
Ga0157524_132915	Ga0157524_1329151	F088161	LSIGDLMKLCIHCKHLMPRPGDDDYALAKCGAFFTLHPVSGAKLYTYAFNQRTFLDGKCGMPAAFFEPTEGHNDE*
Ga0157524_133512	Ga0157524_1335121	F016362	RDEVYTVTDTSLQPVPPSFQPQQPLTSAGIPITIQGQTTFEAGQPIVTPQQPLQIQLPPTTAFRQVAVQQQLPQQQVIVQQAVTTPVPVSNTGAASTNMGIDFTNMNVVVQAVAMQPVVTPAPSQLFTTEAYTVPGGVSFQPQPPITTAGAMITRVGAAQVLPGQPIITARDALTIPQQPIAVQVPRQATRQVPACQTITEPCVRPVCITYSCDCQ
Ga0157524_134316	Ga0157524_1343162	F044151	LYFLEPMLHELGLGTLTGERDHLASDEPNVSLPSPT*
Ga0157524_136406	Ga0157524_1364061	F004777	LSFDAAVVSDVELNAPPSGYASVTVSGLDFGVGEQTATAGLERGGRGDRGVCLTSSWTSATTLVCLSNAFGDLFGSASVTVALISGTGRPVFSFDAAVVSEARLNTPPSGYASLTVSGLDFGMAEQTATAGLERGGEGDFGACITSSWTSATTLRCRSNAFGDLFG
Ga0157524_138508	Ga0157524_1385081	F015857	KFYQGRPLLLTPYDYVLTFSALAANTSATQTLSITANADFIFLQLHHRATSSAYAGQTVSTKVAPLARILITDSGTNEQFTNAAVDLENYSTNGNIVNELPYPRIVSGRSTLTVQLSSYEASATINIDLSFSGVLVRAFTS*
Ga0157524_138658	Ga0157524_1386581	F039008	LQPVNVPTPVYVPITQAPTMGFVPVTYGCIQTGTTACTAPSNCGAGTQTVTYRCMSSTGQDMSMSPQLCPGSCAAQTQTCQLAACPVVAAQPQFVPGALNNNACPVGSTRILDEATCRAAAIARGAQFVKVETEAQYPVGCQTFQQPNQGLQVFLNLHPTGASDANSAPLCRTGVRRSQHSAPELPQGPSTLLVALGAVVAIVAIVASAVVVF
Ga0157524_139638	Ga0157524_1396382	F057919	MTVSFHDLNSLFGFFIFLTIASQLVSGTMLSFSLIPEPMIIPIVRDEEDLEDLYADDFF*
Ga0157524_139857	Ga0157524_1398571	F036600	MAMALTTVSELRTTLGVGTLYTDAVLQEVCDASDAVLIPMLWTPNQFSVAHSNVPDIGTLYFNEPIT
Ga0157524_141836	Ga0157524_1418361	F000191	ASGYTVGNLVNQHVRFIESGEKGPLMTYEKALITQSRGREIPGLD*
Ga0157524_142200	Ga0157524_1422001	F030329	NMLVRIAFWRANPTFGNFVDKDKDGKKDKEEPTPVAYALSNMLNEIILPRAKRENSAAFRQKEMQDSKLIAVLDSYKPKLKEWYDKKVSDDSEGPRNGIISDKLGFEEWNRVLDRQDIVGEWEIEQMSEITGDESTKGNIKVRLSIPTCKAAFMDSQNAEQLGVGQADSTSEQAVLDFDEWLECIARIACSKYSAIKQMDPAAKVKAFLQNFFGEMSEEDCMRTSTYIRAVRYDLGDSVPLKDESPEEHAAFLAEFKQLDLSGLYGFPLWEAEVHDLLHANFRELASIFRGYCKSLGEGSSDESAKTMDLEEFHDFVIDVGLETKLHTNKAAAPALYVFEQMKEQFTRADKSGKGLAGPAANSELVLYEFLNVITRVSFYRLNPEYGELTMEHQDTIYPVPFCLEKTLREAILPKAHRDDAAEFRAKTMQMPEVQAALAEGRPRLQAWYATIPLDDN
Ga0157524_143384	Ga0157524_1433841	F016362	SLQPVPPSFQPQQPLTSAGIPITIQGQTSFDAGQPIVTPQSPVQIQLPPQTLQRPVFVQPLPQQVIAQAITTPAPVQNIGVASTNMGLDLSNLGGLLNNVQAVVVAATPAPIQQYESYTVPGGFSFVPQPPITTAGALITRVGAAQVLPGQPVITPRNPLTIPQNPIPVQVPRQATRQVPACQTITEPCVRAACVTYSCDCQSVGSCSQRTCGQQTDTRARVCTCRNNLGQAVDNSQCNSCAASTS
Ga0157524_143411	Ga0157524_1434112	F017830	VIRPFLPVQNHKDNHKNSMAGTTIIVNLKRGDEVVVYAYTGTWLADFPMNHYTHWVGLLLKPSEEEVDGFRQLADECASAENGF*
Ga0157524_143811	Ga0157524_1438111	F074330	GRSIQKLHWNRQSILESAMLNSTSTGFLLVTSTVVLIASLFLTNDPVDTCAVSGGMQYCVGWNNAYAFVWSIMEIVLCAVGLVALKYKPDLLSKVLVAKVPMLYAPITVESLLSFVLFLNATIGALIMTNQPEHGFDQTNNGYFACWAGVCAALGNIGVDAIKNGEDIAKKGVSPAWGIIISSIMVLLQAFPYIVFDTTQMPSGPPRPL
Ga0157524_144270	Ga0157524_1442701	F000237	IIFTNKHLNIDQMTRLMVLHYFTPYYLYLVQLHVMFCHESDSDSGESIYEDKSGSYISFYDAFLKEIQDAYTLFVFVYFLHHFNGSTVNYFFFERNISELDEIRFYGVAPHYFRPLMGLLVISPTHYEGLMMALFFVLLTFLPIIYNYNVYNKHVPTIPMQNSLIQTFAFIIFMMSLYCSASMLPCGRYYYEPEGGYVGNPVKFSYQYIYLYMAFVHHLDLIDHYIFQFFQ
Ga0157524_144657	Ga0157524_1446571	F053251	LKLAMKEGCARATLAEEQEEAPTAKKAKHEEQIRVRARDGEEVTLSRDAARLMGTLKDLMDLATSEDGIYPMPTIMASTLQMVCKLNDPDYTWPSSEEPSLFQLIQLIEDALYLDAPIALKHIQRAIASQLNGKRAPELCALIGAGGDFGSAEEHAPPNVEPAF
Ga0157524_146524	Ga0157524_1465241	F024466	MMRRMMVIYTMMMMTIDDTGARYDDRAMYVLSDMSHVLDRITDRKVGGIDALSM
Ga0157524_146524	Ga0157524_1465243	F024466	MMRRMMVIYTMMMMTIDDTGARYDRAMYVLSAVSHVLDRITDRKVGGIDALSIRTIMMPCMSR*
Ga0157524_147639	Ga0157524_1476391	F053251	MDMRATSAEEAPAAKKAKHEEQIRVRARDGEEVALSQDAARLMGTLKDLMDLATSEDGIYPMPTIMASTLQMVCKLNDPDYTWPSSDEPSLIQLIQLIEDALFLDAPIALKHLQRAIASRLNGKRAPEVGALLGAGGDFGSAEEHAPPNVEPAFVPEDVVEAPQQPASSTLPTEPLQQPSFSADAMEAALGLV
Ga0157524_148117	Ga0157524_1481171	F000237	ENVYEDKSGTYVSFYDAFLKEIQDAYTLYVFVYFFTHHFDASTVNYFFFERNISELNEIRFYGVAPHYFRPLMGLLVVSPSHYEGLMMGLFVLLAALPIIYNLYQPHHRYLPIIPMQFSMLQTIAFILFMLSMYCTASMLPCGRYYYEPEGGYVGNPVKFSYQYAYLYMA*I
Ga0157524_148158	Ga0157524_1481581	F015184	LFCSVSLKNGNGCETLGAPIAHGQHSTLGTQLGFSHTNSHFGLGHAGLWHFQSHFGSSHTGSHSGLGA*
Ga0157524_153057	Ga0157524_1530572	F004777	LEPGGAGSTAVCFTASWTSATTLACRSNAFADVFAAATLTLSSISGTGKPIFSFDAATVSDVRLNEPYSGYASLTVSGLNFGVGEHTATAGLERGGGGDLGVCFTSSWTSATTVTCLSNAFGDVFRSATVTVATVSGTGRPIFSFDAAVVSEVEQNAPHSGYASLTVSGLDFGVADQTATAGLERGG*
Ga0157524_154473	Ga0157524_1544732	F003666	RRVRIHGGEFGESARAIHRNEPEKSGSSRVLEIPKLD*
Ga0157524_155258	Ga0157524_1552581	F005668	MFQILFDLEDYAGTYRATRDAYLKAANELKLATGPYKAARDAYVAATATYTKGLYE*
Ga0157524_155307	Ga0157524_1553071	F004777	TVASVSGTGKPVFSFDAAVASSVRLNAPHSGYASVTVSGLDFGVSDQTATAGLERGGGGDLGVCFTSSWTSATTLGCVVFPYADSFGSASVTVAAVSGTSRLVFSFDVSVVSLVDQNAPHTGYGSVTVSGLNFGVGEHTATAGLEQGGRGDLGACFTSSWTSATTVSCLSNAFGDVF
Ga0157524_157749	Ga0157524_1577491	F004777	QVGGLYELASVASWVTTWVTVGSVAGTLNAAYSFDAASVSEVRLNAPPSGYASLTVSGLNFGVGEHTATGGLERGGRGDLGVCFTSSWTSATTLACRSNAFGDIFGSGSVTVASVSGTGQPIFSFDTAVVSEIDQNAPHSGYASLTISGLDFGVGEQTATAGLENGGAGDRGVCFTSSWTSATTLACLSNPVGDVFQ
Ga0157524_158766	Ga0157524_1587661	F018379	IVGTASIVASADAGFLGFVASVRTVGANTVIDLYAGVDNASDKFLNVYNANISTTLAGGFVQKAGLATKTWKPDTAGFTSTRNTIDDSFMTAGTFGGGVYGGEFYASSNTNGDPNFTGTSWNATPASPAATTVPANAGWYTGDPTSVDNRAESLAGMIGRVNTGATAAVGNTLGSAGTANANFGIW
Ga0157524_163933	Ga0157524_1639331	F004777	RPIFSFDAAVVSDVALNAPHSGYASVTVSGLDFGMGEQTATFGLERGGRGDLGVCFTSSWTSATTLSCRVNAFGDVFGTASVTVSAVSGTGQPIFSFDAAVVSAVRLNGVLSGYASVTVSGLDFGVGEQTATAGLERGGGGDLGVCFTSAWTSATTVACLSNAIGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300012783: Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES002 metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences