Sample 3300013502

Overview

Basic Information
IMG/M Taxon OID	3300013502 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118585 \| Gp0137243 \| Ga0119901
Sample Name	Activated sludge bacterial and viral communities from EBPR bioreactors in Brisbane, Australia - M81612
Sequencing Status	Permanent Draft
Sequencing Center	California Institute of Technology
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	549390550
Sequencing Scaffolds	14
Novel Protein Genes	16
Associated Families	11

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
Not Available	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia
Type	Engineered
Taxonomy	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Activated Sludge → Activated Sludge Bacterial And Viral Communities From Ebpr Bioreactors In Australia

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Australia: Brisbane, Thorneside Wastewater Treatment Plant
Coordinates	Lat. (^o)	-27.485973	Long. (^o)	153.190699	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F004548	Metagenome / Metatranscriptome	433	Y
F006745	Metagenome	365	Y
F013721	Metagenome / Metatranscriptome	269	Y
F034766	Metagenome / Metatranscriptome	174	Y
F044511	Metagenome / Metatranscriptome	154	Y
F046478	Metagenome / Metatranscriptome	151	N
F054974	Metagenome	139	Y
F072990	Metagenome	120	Y
F088924	Metagenome	109	Y
F093447	Metagenome / Metatranscriptome	106	Y
F097376	Metagenome / Metatranscriptome	104	Y

Family

Category

Number of Sequences

3D Structure?

F004548

Metagenome / Metatranscriptome

433

F006745

Metagenome

365

F013721

Metagenome / Metatranscriptome

269

F034766

Metagenome / Metatranscriptome

174

F044511

Metagenome / Metatranscriptome

154

F046478

Metagenome / Metatranscriptome

151

F054974

Metagenome

139

F072990

Metagenome

120

F088924

Metagenome

109

F093447

Metagenome / Metatranscriptome

106

F097376

Metagenome / Metatranscriptome

104

Scaffold	Taxonomy	Length	IMG/M Link
Ga0119901_1009890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3336	Open in IMG/M
Ga0119901_1037356	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
Ga0119901_1093157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	940	Open in IMG/M
Ga0119901_1111418	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
Ga0119901_1143198	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
Ga0119901_1144344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	731	Open in IMG/M
Ga0119901_1161162	Not Available	686	Open in IMG/M
Ga0119901_1198720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	607	Open in IMG/M
Ga0119901_1226128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	563	Open in IMG/M
Ga0119901_1228685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	560	Open in IMG/M
Ga0119901_1230525	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
Ga0119901_1231777	Not Available	556	Open in IMG/M
Ga0119901_1237344	Not Available	548	Open in IMG/M
Ga0119901_1237357	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0119901_1009890

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia

3336

Open in IMG/M

Ga0119901_1037356

All Organisms → cellular organisms → Bacteria

1555

Open in IMG/M

Ga0119901_1093157

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium

940

Open in IMG/M

Ga0119901_1111418

All Organisms → cellular organisms → Bacteria

848

Open in IMG/M

Ga0119901_1143198

All Organisms → cellular organisms → Bacteria

735

Open in IMG/M

Ga0119901_1144344

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium

731

Open in IMG/M

Ga0119901_1161162

Not Available

686

Open in IMG/M

Ga0119901_1198720

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium

607

Open in IMG/M

Ga0119901_1226128

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

563

Open in IMG/M

Ga0119901_1228685

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia

560

Open in IMG/M

Ga0119901_1230525

All Organisms → cellular organisms → Bacteria

557

Open in IMG/M

Ga0119901_1231777

Not Available

556

Open in IMG/M

Ga0119901_1237344

Not Available

548

Open in IMG/M

Ga0119901_1237357

All Organisms → cellular organisms → Bacteria

548

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0119901_1001140	Ga0119901_10011403	F088924	MKLLSAFLCVLCGFTQAAEPLKLLFAGSSSMYWNDLPREIAKLVDGKIAGHIGRQVIPEAVGRSGSDIRVYLEPGFNRYEYGVKPGQSFLDKIATEKPDIVPMMVVCRFIMGDEAPTNGSPDHATSITRYSEAIRAAGGEPMFYEMGWGKTEREAEGRQRILELAKKNQITLFAPCSTAWSRVYAEKPDLALQHPQDNAHPGDAGHFLNLACFYAALTRESPVGKLPRTFHVWPHGKYEADEAKLAAFQPDAYQGKMAKWIFKHMSMHATATLDDETACYLETVAWETWQAVSQTLLSGQK*
Ga0119901_1009890	Ga0119901_10098903	F013721	MKEWDTMTISRVGQGTLPKWWRDASGLSQGGVVEVRPLRDGLNSIVLTPKPGKRHGAVGLLTHFARCPRPIDPPDRHPLPFK*
Ga0119901_1037356	Ga0119901_10373561	F004548	CFLNKFVPGHPYANCDGSTGTPTLTAGDYQCFLNKFAGGCS*
Ga0119901_1093157	Ga0119901_10931571	F044511	TKRAPDAGDSAAISSSFLRLFIFLAGRLRRPRPSAGNANRWALEN*
Ga0119901_1111418	Ga0119901_11114182	F097376	MKKAVASKKNKTATDVVPQKKQTKTGPVELDLAELKKVSGGLPKGGWERTK*
Ga0119901_1143198	Ga0119901_11431981	F004548	ANDFQCFLNKFAAGHPYANCDESTGTPMLTANDFMCFLSQSIAFCP*
Ga0119901_1144344	Ga0119901_11443442	F034766	MPDAPRKYLLITPDQVRSARRFWPQVSDKTWCLVLKRGEEPMMLNKAPHRGVGFVTVEVPTPEQTKEGMYYRRDMDVLILVAGETDLVRI*
Ga0119901_1161162	Ga0119901_11611621	F072990	MATESLAEAVRALTPVEQEAVLRFINYLKQRPTPANSESPFLSAAEEFIAQHPELLQRLTQ*
Ga0119901_1198720	Ga0119901_11987202	F054974	LAWSRLIVGLVLVLIAALMFLLPDATYSTAGAVAIGILGLISIAISRR*
Ga0119901_1207963	Ga0119901_12079631	F004548	NKFAAGDPGANCDGSTGTPLLTANDFQCFLNAYAVGCP*
Ga0119901_1226128	Ga0119901_12261282	F046478	MLHQPIFAPVPLLAADVNCFWALEQDQESYNCEVYLPDAYIEVIINVGAPLLLESEYGMLELPRAFVNPLQHKPLRIRAAGF
Ga0119901_1228685	Ga0119901_12286852	F013721	MKDWDTMAVSKVGQGTLPKWWRDASGLSGGGVVEVRPLRDGLNSIVLTPKPAKRRGAVGLLAQFARCPKPIEPPERHPLPFK*
Ga0119901_1230525	Ga0119901_12305251	F093447	MKPETRQKLAREPFAEKIRKVAQLIRLAKTFPRRPRLTPAQPH
Ga0119901_1231777	Ga0119901_12317772	F006745	VRVSERGKRTSSAVLVYVIVLMSLQVFLVTVAAEAFLDDDASLAWATAGVSVVLFAAATAFLRWLRP*
Ga0119901_1237344	Ga0119901_12373441	F004548	GRPRTPALTANDFMCFLNKYPSADPAANCDNSTMQPMLNANDFACFINKYAAGCP*
Ga0119901_1237357	Ga0119901_12373571	F004548	LNAYARGDAAANCDGSTGAPTLTANDFQCFLNTFAAGCS*

Scaffold ID

Protein ID

Family

Sequence

Ga0119901_1001140

Ga0119901_10011403

F088924

MKLLSAFLCVLCGFTQAAEPLKLLFAGSSSMYWNDLPREIAKLVDGKIAGHIGRQVIPEAVGRSGSDIRVYLEPGFNRYEYGVKPGQSFLDKIATEKPDIVPMMVVCRFIMGDEAPTNGSPDHATSITRYSEAIRAAGGEPMFYEMGWGKTEREAEGRQRILELAKKNQITLFAPCSTAWSRVYAEKPDLALQHPQDNAHPGDAGHFLNLACFYAALTRESPVGKLPRTFHVWPHGKYEADEAKLAAFQPDAYQGKMAKWIFKHMSMHATATLDDETACYLETVAWETWQAVSQTLLSGQK*

Ga0119901_1009890

Ga0119901_10098903

F013721

MKEWDTMTISRVGQGTLPKWWRDASGLSQGGVVEVRPLRDGLNSIVLTPKPGKRHGAVGLLTHFARCPRPIDPPDRHPLPFK*

Ga0119901_1037356

Ga0119901_10373561

F004548

CFLNKFVPGHPYANCDGSTGTPTLTAGDYQCFLNKFAGGCS*

Ga0119901_1093157

Ga0119901_10931571

F044511

TKRAPDAGDSAAISSSFLRLFIFLAGRLRRPRPSAGNANRWALEN*

Ga0119901_1111418

Ga0119901_11114182

F097376

MKKAVASKKNKTATDVVPQKKQTKTGPVELDLAELKKVSGGLPKGGWERTK*

Ga0119901_1143198

Ga0119901_11431981

F004548

ANDFQCFLNKFAAGHPYANCDESTGTPMLTANDFMCFLSQSIAFCP*

Ga0119901_1144344

Ga0119901_11443442

F034766

MPDAPRKYLLITPDQVRSARRFWPQVSDKTWCLVLKRGEEPMMLNKAPHRGVGFVTVEVPTPEQTKEGMYYRRDMDVLILVAGETDLVRI*

Ga0119901_1161162

Ga0119901_11611621

F072990

MATESLAEAVRALTPVEQEAVLRFINYLKQRPTPANSESPFLSAAEEFIAQHPELLQRLTQ*

Ga0119901_1198720

Ga0119901_11987202

F054974

LAWSRLIVGLVLVLIAALMFLLPDATYSTAGAVAIGILGLISIAISRR*

Ga0119901_1207963

Ga0119901_12079631

F004548

NKFAAGDPGANCDGSTGTPLLTANDFQCFLNAYAVGCP*

Ga0119901_1226128

Ga0119901_12261282

F046478

MLHQPIFAPVPLLAADVNCFWALEQDQESYNCEVYLPDAYIEVIINVGAPLLLESEYGMLELPRAFVNPLQHKPLRIRAAGF

Ga0119901_1228685

Ga0119901_12286852

F013721

MKDWDTMAVSKVGQGTLPKWWRDASGLSGGGVVEVRPLRDGLNSIVLTPKPAKRRGAVGLLAQFARCPKPIEPPERHPLPFK*

Ga0119901_1230525

Ga0119901_12305251

F093447

MKPETRQKLAREPFAEKIRKVAQLIRLAKTFPRRPRLTPAQPH

Ga0119901_1231777

Ga0119901_12317772

F006745

VRVSERGKRTSSAVLVYVIVLMSLQVFLVTVAAEAFLDDDASLAWATAGVSVVLFAAATAFLRWLRP*

Ga0119901_1237344

Ga0119901_12373441

F004548

GRPRTPALTANDFMCFLNKYPSADPAANCDNSTMQPMLNANDFACFINKYAAGCP*

Ga0119901_1237357

Ga0119901_12373571

F004548

LNAYARGDAAANCDGSTGAPTLTANDFQCFLNTFAAGCS*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300013502: Activated sludge bacterial and viral communities from EBPR bioreactors in Brisbane, Australia - M81612

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences