Sample 3300017375

3300017375: Metatranscriptome of marine eukaryotic communities from McMurdo Sound in HESNW medium w/o silica, 4 C, 30 psu salinity and 283 ?mol photons light - Polarella glacialis CCMP 1383 (MMETSP0227)

Overview

Basic Information
IMG/M Taxon OID	3300017375 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0212110 \| Ga0186398
Sample Name	Metatranscriptome of marine eukaryotic communities from McMurdo Sound in HESNW medium w/o silica, 4 C, 30 psu salinity and 283 ?mol photons light - Polarella glacialis CCMP 1383 (MMETSP0227)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	57730337
Sequencing Scaffolds	25
Novel Protein Genes	33
Associated Families	26

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	4
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	7
All Organisms → cellular organisms → Eukaryota → Sar	5
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	3
All Organisms → cellular organisms → Eukaryota	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales	1
Not Available	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	McMurdo Sound
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000023	Metagenome / Metatranscriptome	5736	Y
F000076	Metatranscriptome	2620	Y
F000085	Metagenome / Metatranscriptome	2467	Y
F002609	Metagenome / Metatranscriptome	543	Y
F003130	Metatranscriptome	505	Y
F004604	Metagenome / Metatranscriptome	431	Y
F009075	Metatranscriptome	323	Y
F010767	Metagenome / Metatranscriptome	299	Y
F014819	Metatranscriptome	259	Y
F015603	Metagenome / Metatranscriptome	253	Y
F016002	Metatranscriptome	250	Y
F019947	Metatranscriptome	226	Y
F020362	Metatranscriptome	224	Y
F021304	Metagenome / Metatranscriptome	219	Y
F026799	Metagenome / Metatranscriptome	196	Y
F039474	Metatranscriptome	163	Y
F048099	Metatranscriptome	148	N
F058160	Metatranscriptome	135	Y
F060925	Metatranscriptome	132	Y
F074386	Metatranscriptome	119	Y
F074387	Metagenome / Metatranscriptome	119	N
F080840	Metatranscriptome	114	Y
F085072	Metatranscriptome	111	Y
F088941	Metatranscriptome	109	Y
F093247	Metatranscriptome	106	Y
F096614	Metatranscriptome	104	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0186398_1008389	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1598	Open in IMG/M
Ga0186398_1012062	All Organisms → Viruses → Predicted Viral	1297	Open in IMG/M
Ga0186398_1013826	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1188	Open in IMG/M
Ga0186398_1014081	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1173	Open in IMG/M
Ga0186398_1014523	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1148	Open in IMG/M
Ga0186398_1014678	All Organisms → cellular organisms → Eukaryota → Sar	1140	Open in IMG/M
Ga0186398_1015110	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1116	Open in IMG/M
Ga0186398_1016846	All Organisms → cellular organisms → Eukaryota → Sar	1029	Open in IMG/M
Ga0186398_1017000	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1022	Open in IMG/M
Ga0186398_1017389	All Organisms → cellular organisms → Eukaryota → Sar	1002	Open in IMG/M
Ga0186398_1017461	All Organisms → cellular organisms → Eukaryota → Sar	999	Open in IMG/M
Ga0186398_1018193	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	965	Open in IMG/M
Ga0186398_1018645	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	945	Open in IMG/M
Ga0186398_1018826	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	938	Open in IMG/M
Ga0186398_1018907	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	934	Open in IMG/M
Ga0186398_1019361	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	912	Open in IMG/M
Ga0186398_1019694	All Organisms → cellular organisms → Eukaryota	899	Open in IMG/M
Ga0186398_1022484	All Organisms → cellular organisms → Eukaryota	792	Open in IMG/M
Ga0186398_1022642	All Organisms → cellular organisms → Eukaryota → Sar	786	Open in IMG/M
Ga0186398_1026239	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	672	Open in IMG/M
Ga0186398_1027205	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales	647	Open in IMG/M
Ga0186398_1028225	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	621	Open in IMG/M
Ga0186398_1028720	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	609	Open in IMG/M
Ga0186398_1030250	Not Available	575	Open in IMG/M
Ga0186398_1033487	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	512	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0186398_1003951	Ga0186398_10039513	F000076	MAEEEGQEQIFTENAAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTLGEIRAKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0186398_1008389	Ga0186398_10083891	F074386	VEDSKTQVRLVARRFCQMGQIVSRICSPGGEPAKPQVTQLNAPGYDWSPSSESQVESAPELPTITVVPPAEPEVVHVPTPAPTTPITLETLQGSWVNSMGAKIIVTGTQVALNGLPMKMHPITLNEDGTVASVGKIWQLNGWLEDERIEFKEAPSREVMEFARSVVWSKATEENMKQWTQQMSSLGYAGSSSAPLSRGVEGCCPGTCDAKAKIAVDDKDRDKAELEMLNKLINEFRVPNMTVVPPRQVIPDFSNRGHTGLSVEHVHYLASSFRDKGFQKRTKDAGHDIPVLVKELCKSELGRKSIENWRGKLAEESGFPPKDHYERLFAGQELYTSLGNGHFNQALNLFGTESISIYNSQKYVFGHDANLREAVEIGVRSLVLRGDIPLRDRETISRLLNSKREFKWNVAEDGTLLILDAQEDHTTVKQFEALSKVLDAVELNCLVRAELGVKDSHRIGK
Ga0186398_1012062	Ga0186398_10120621	F014819	QAIFYAPVAVGVEGMTGIDLTTLPPAQVKAIKELSLDAGKDEQLLWIAEHAAHVELPPEWVQFEDDDGNEAFYNAKTKQLTEQHPIMTKYKTFVNKVRKFQERMGTVGKKVKPHLAVIMNEVLNRIYRELPPITPEILERLSVLLYIDTNLEHNLTRRAKIAIESYAEDQYDIALQAQQKADMDAFLHEVRNEQIRLEVLNKPDAVIMCTEIEAQPARVKCEQCKDFFSLEGFANTHNTGKRKNHTTVRCEQTTCSVYTDQLATCEVDNTLFCNRAYEEVAGKQPHIRQKRKKVLGGLACSEYPGTVAEVLCEDCSDLYCWEAFIELHRRGNRIRHVPLRLDSEGQLYRAGEVLPPEECARLIDKARLAREGGPWLAFQDDQLNTYWYHLSDKVTTPQNPYL
Ga0186398_1013826	Ga0186398_10138261	F000023	MEALLQELQSRVAALEQDAGGAGDGLLPDRKAGGGGGSDAQILKKVSTRLQDFEAQITAQLGNLQTDFDKKLSHVNRGASSMKPLDAAGGSAGMDTMAEDLDQLKYDVGELKDLLSNNKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAVKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEV
Ga0186398_1014081	Ga0186398_10140811	F010767	WDIQALLLWHKSGPSPLPSQAMEKDFAEHGSQGSASAGEFSDAAQLQGVAPPGSPGCHCLEFDSWWNEGRTRRFVYIRYNIAEGAFQMAIDEDSNLYHVPVAYGSRTGEAVTVWDLHVGAELDILGRMTTLQRCSQTTAQWNKYWAERLLALRNKLIEELKKYDTRKHDPWLTWQGKEKTAGTADLRLLMGQVSGLGAQFAEYRPRLALQYIIPQEMLAIEDLPRQRRERAEKALAEEDE
Ga0186398_1014523	Ga0186398_10145231	F003130	MWQTQELLHGKNSSVAFPALLVSLASILVVYCHAVDTHGGDPTKTFLALIVVQMLPLVFLEMKILSCPDPVSMLSRFGTKVLLMHAGFLALRVCTWPLLEVGLGMCNLAGLLCVCAALHWGFCFRLTIASAYEHRDVGGLTLLALVAAVGTELLDFQNVHSMLESTIFAASSYVEILAFVPAVWMVHQTAKKSDVMEISAGASVESQSLCFFAFLVSFYVMEDVVSAFRVYGDEPLAAAGHVVHFLLLLDFACFLLAHIYNPEKIQGQLLRWLPVSGFV
Ga0186398_1014678	Ga0186398_10146781	F015603	NNNTIQLGRHLGICMMALSTAMVSRVVLPLLALCLTQVSSQDLSQVCSHEDYDNVGPAMEITDGETVYRDIRPNQTHRWFFRSYNVTTMNQPDEYRKVIINLEPCRGIVYLFVRKTRRCYPDPYSCIDLTPGQESRNAADCRWTHFMSEIDGSRDGTPSFFEVPLSSTKYFISVFSTTNSAYTLTVLADIGAFPRPGGNGKVVARQLRELQVQISWDEADFLPRGISSVKQYWVYSSMLLESDNRTNFAVFLRPDKIMNTVCGLQNNTDRQYSLVASSDCSFGKCNATIDGVITDKRYVFNVVAESFRGHRMAYAGLIMRTDWEVVRQAASDKTLKVVGAVSGSVLGMVVIIYFLMLKLY
Ga0186398_1015110	Ga0186398_10151101	F000023	LKLLSLARDVFTRSGKTAPPRDRNVRVSHIIMEAIIQELQARVGALERGEAGASGGEGGSMLARASAGGSDAQILKKVSTRLQDFEAQITAQLGNLQTDFDKKLSHVNRGASATKPLDAAGGSAGLDTMAEDLDQLKYDVGELKDLLSNNKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAVKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEV
Ga0186398_1016846	Ga0186398_10168461	F016002	VQLTTEPAQSARHLLTAGDSFDITFTPRPIGGFTNFSNNSRSTPMTPRQRNLKDQMELPSLHTYPVPPNCSPDDAEEVRKDKLLEMYQEFALDLHTGMYLTQLTSNRDYSDIHCQLMEDMTTLKLDQSNGRIIEFPLTNVSKVYRIVKNDDKWYSAGTPLPSASPLNTEQIVVVEFMRRKLAFVFKELQVAQRFLICMELLIRRSQQKQALRSLTPTFPPQHSQSRQQCPTPRQVHDAMARPTPSPGSAGDSNTIPNSM
Ga0186398_1017000	Ga0186398_10170001	F021304	LGLLLCSPLAVGEPCQDRVGGDAIVQFTAEESTCCYDLDEFLQDNDYVYVLFYSQKGRLNIDISAKFDQLAREWKWSRIHFGKIDADQDREMAKKWVEPGMVPTNVMYKFGRPVEVKPKDFEQIRDRHQGSPDGQKWMLTKYMGEDKEGSNLHYASTLLTAKKHAKFLKNHQVAIVGYFRKESDQHHKAFSEAVWKLHQDIDRDDIGAGVAAVINPAVSKKLDVQVPKLVVYLDGRAIEEDGHTPLPAKWTVEAVLSYVRQFNLLGEAEATSEGRGIEL
Ga0186398_1017389	Ga0186398_10173891	F002609	PEQMIYMWNVLTLIFVTQCLMVIGYAAALRFFPDHWWTCTLTFGIPFSYIAIQNIYIDHDVMHGATFPRYEWQKYITHCFSDFFSLPWEEFVLEHNRHHASTVDLLVQGEFGWDPEEFQYALQQWSDKWYHYILTIPWIPVVHFFGLNDTGALFALEWYCHFPDEGTGGKCNKEFWTKWVPRRLKHSAFVASLWACIWLLGTYPLGRPLSEGWRFMFTVSFFARVGFSAAWIFITNFTHSLPWNRFLANDPARTWPLLHSIMAVVLGGRHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGIWKPNGDEPTEMQKQQRKRS
Ga0186398_1017461	Ga0186398_10174611	F016002	VQLTTEPAQSARHLLTAGDSFDITFTPRPIGGFTNFSNNSRSTPMTPRQRNLKDQMELPSLHTYPVPPNCSPDDAEEVRKDKLLEMYQEFALDLHTGMYLTQLTSNRDYSDIHCQLMEDMTTLKLDQSNGRIIEFPLTNVSKVYRIVKNDDKWYSAGTPLPSASPLNTEQIVVVEFMRRKLAFVFKELQVAQRFLICMELLIRRSQQKQALRSLTPTFPPQHSQSRQCPTPRQVHDAMARPTPSPGSAGDSNTIPNSM
Ga0186398_1018193	Ga0186398_10181931	F020362	LRDSIRLLPSPRPLASAKVRPGIAQMAKQLGAVTAMLLAGAVQAFPDCVEQRVVLRHAGAHAIFVDLSAFGTAGCWQNDCKNTDKFNSRDKGICARACSQVQECTHWSFGEQDGVTKCFLRKSDGGREEADGFSAAPKACAPPAIPDAWLAMSVAETEAMKACDAGKSEQCPDMARAMTTWRYAIAALKRASDGVLDAGTFQYVTQVESDTNAFVAQMSEENFPVVTNNNRQVFNALRGWMDGQPKAEVDAADQSLPMPLRGSLCGATSCYE
Ga0186398_1018645	Ga0186398_10186451	F058160	SDQDALVRAAMVAGFSPSISVLYRGQRAPYWYLESNEEVSPFRGSANADYQMNGADGEEWMVFSDAMKMGRFNSIMDSSLVFSPFVLLFARALMIDEKKGEIRFDRWYAFVQNGPWIKELLDLRAKVMPSFKEAIESRDLAGFSRELTTRIADFVRQRPIKLDKIEAVARNIDEEVTGAARKHLSFYEWPEDLGVDDEEEE
Ga0186398_1018826	Ga0186398_10188261	F096614	MAPPCQLTRPACGSQAVSTCRCRQFCDKDAEERCKGPGPAAVAPLQSLEDLLYNVLCFLRARSLGRLLTSSHEAELWVRMMLPAVVDRRGWGSSDQVSANPLSTLHLSEIWDILADVSSPIGVHYMLLRHTLFGTMLELQLESGSTLAHFSFRASDEEPPMWCRGSFAVRGALQCRRYYDELRQRPCRTPITQASLAQQSSYCVEHCGDRFVLRPACKAVDARPQLQLTKRGFIAIAAEGGGIIVEDGQPVRRIEADAPDLPDSCPSERGLRC
Ga0186398_1018907	Ga0186398_10189072	F093247	YSGRAGGTVSLVLGGPASQPRLGPMGDHTNAPMQGGGILGRFENVRQKKSAKAIVTCAAATPEYLRHDFLKPQHLPVDRIDEEANFAASSNINETRFHKGFHRRHKADIQQDAARLEAEAEREYVREERAAYAAQSTVHFREKHTFNILTGEGSGRECEFRHVGKKIVNPFGCMEATFAEHDRDASNRQMNSKHRFFQYPAQEKETRTANIFREGLQDTVRESAVIGYGRSGVRRTRNASCGASDNFAHLRALPPDPEYEPPRHGNASQIMFG
Ga0186398_1019361	Ga0186398_10193611	F074387	QAICLSKLPGGLPFCAPGIAFRARTCLYKMDRFYPVGQQATDDSWKTTYEVMNAMRSFERSAYPPGTAIHQPGAREFFGYSTPGPIAGRLVNSSLCLTEEVGSPNPRAHHAISRSQVADDLECFTNHDLPDMLKGNSPMATIMSLSPKSRTSSSMSKSISLPSIHRTRAGPRLAEPNPVISGLEDEHFTYFVPVGEQHKHKDKLNTSTMTKLQKDSMISFPFSGEGTGFHFQSSGASWWPQGKNHLLPTSYQSNFKKPGFFRDTPMLKSTSPFDLH
Ga0186398_1019694	Ga0186398_10196941	F019947	WLEPFWLKHQSFPISPAHTLSHFASILAQIPWHATMPVLSMPEDKPKLMFYAAMMWMQNFGFFLMYFMMYTAIPEPEGGGGECTNLRFWVGFFALDCFVESFVCVWMAMGGYTDDGCLFPVMWILHLLVALPYVLCTFTIPHAIYSDDGKACRALAGAPLYPLVPVYWTHATLFIVYVWMMLSVTYYSFVKSTFSKTKDTATSGYVAAVNA
Ga0186398_1020472	Ga0186398_10204721	F009075	QRLAQCSAPLLPPKRNRLDVLNSAAMAEASTVAFASMQSSSQGASAAFIQHIRQTLQKAQEITQVVSEAESIADDAQKFCDAIKAQHNIQTKKLALTGRVGAPVPPLAASLTREIQTSVVWTQSMLQMCNMGDSSADIERGSRLSFVQSSAPAGA
Ga0186398_1022484	Ga0186398_10224841	F019947	WLEPFWLKHQSFPISPAHTLSHFASILAQIPWHATMPVLSMPEDKPKLMFYAAMMWMQNFGFFLMYFMMYTAIPEPEGGGGECTNLRFWVGFFALDCFVESFVCVWMAMGGYTDDGCLFPVMWILHLLVALPYVLCTFTIPHAIYSDDGKACRALAGAPLYPLVPVYWTHATLFSVYVWMMLSVTYYSFVKPTFFPYTKVPAISGNSPRDMGLEPFNP
Ga0186398_1022642	Ga0186398_10226421	F039474	SSRVDLSSLRVDNAPEAMLARSACRLSALRRAAPFRAAYSAGEPTRKQAFGYGEAAPAGAPGFGGEHQLAPPETLQHTGKYIWENMTNLPKYKELIEGIGYPGQRHSAGGLCTIGRIYYGPGRYDYGRPKMPKGWFANYFYPFWEFGHLMFVADRWVAIRCLRHFVGIAMCFIPLWYDMQCNKAMILDYKAQGHEW
Ga0186398_1023194	Ga0186398_10231941	F000076	LKISSHFGHCHSSLHELPSPRSKFPAMAEEEGQEQIFTENAAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTLGEIRAKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0186398_1024370	Ga0186398_10243701	F000085	PHCAHRHTLHPSLSCVTIRSMAMRMAAVVLAAVGGSAQAQNWPACQEQNTVIRNAGQALFANLQGYGATIGCFLDDCMSSDKFVASEIESCAKVCLSLTGCTHWVWGTEEGEQKCWFRSGDSGREGGEGWVSGARSCVPAGTQALVMGNNECWAEGFGYPDCCEAKYGPNGNAQCWDGVYNYDRCCFPKEEL
Ga0186398_1026164	Ga0186398_10261641	F000085	MKFGLLATSLLLGASAQNWPTCQEQNKVIRNAGQALFANLQAYGATIGCFLDDCMSSDKFVASEIESCAKVCLSLPECQFWVWGTEEGEQKCWFRTGDAGREDGEGWVSGAKGCVPAGTQALIMGNAECWAEGFGYPECCEAKHGPNGNAQCWDGVYNYDRCCFPKEEL
Ga0186398_1026239	Ga0186398_10262391	F080840	PNAVWLELTQVQELLFRRTDFSAKMSPSDHGIPKVAIPPEKWTKSIYSTPDSGLAKSEAGQLTGMKFDPSFFGRAYTQCIGRGLSHKECVASLPLSDAKITAPGPLADKAANAELSAAIACVSQNGGDSEKCKTHFDALAKLAGYKEEVKKSSAEKATDFCNKAGWKLLAVPVIYYGMKFIKIK
Ga0186398_1026381	Ga0186398_10263811	F000076	LKISSHFGHCHSSLHELPSPRSKFPAMAEEEGQEQIFTENAAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETSLGEIRAKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0186398_1027205	Ga0186398_10272051	F085072	HFTNWHPFHETIPMFRSGLEKVCPALKLGCVPYIGHFDNGQDYKLARTLSAVRFTKEPHEKISSEGFDLLMRRDQVMDIEVYLALYDMQDLRDWLYKTKRPYVVNLLFHAWLFQELEYRKEAAQDIEVAIFGSSGVFGLPEDPAGLTKGLRTLKQNVWVKDKIYMCMGPDVGHFRVDRHRLVCTFWSLCIPAGEERAIVTKHVLINETHTHVSRE
Ga0186398_1028225	Ga0186398_10282251	F048099	QAAGSLLGTRFTTTLSTSSRRYFTMSFAANLTKIVASKKAEVGEREKISAKWTEKEDELLDEGVALFKARCVKEAEQQKTEATISFEVLTREIEDFPKRVLTDSTYFVDSWGEGLSSGEPWFYATRGLNASWSPGAPILFAEVLQAMLPKFVDRVKDLGFTSTSHEAGTWKVTVNWGLTDESDKKKRRKD
Ga0186398_1028720	Ga0186398_10287201	F080840	GSSALVARPLFLKSGSPGPVVFVKKMSPAIPKVSIAPEKWTQAVYSTPESSQAKAEVEKLSAMKFDPSFFSSSYTQCIGRGQSHKECVASLQNDTRITAPGPLAGEAANKEITAAISCMDQHRDPTKCTRHFEALSKLAGYEEEVKKSSTEKAKDFCNKAGYNLLALPVLYYGMKFIKIK
Ga0186398_1030250	Ga0186398_10302501	F060925	SRTTTRRSSVSWVSLGPGRVDGEAPPRSVAAMLRVKEVERVLARAMTDGLTNVMLVSDEGALIAAARSEEADHTASAVLASVYSEYKVAERFVEPVSGGGSPSSLQAILFDCEAARVACVSFVQCSEDSQILLCVCSDKQTHYGVLWSKLELLKESLKCLEPILMPMAGAGSG
Ga0186398_1031260	Ga0186398_10312601	F088941	MSLISPYQAQGKWAHSSGGEIEVTVDSSGQSVVINHPTVGKQTIEVSKFCQGDGLDYFGFKGKLDGQKITWNNGVTWSKIG
Ga0186398_1032019	Ga0186398_10320191	F004604	LAAAGLCLGAHVGLAVASRSRAARKAEGEAEVETKVASKEALKYVETPQDQRLFELVYLQYTSEYMKGPMYWDVAKGQGGLPHYAGEPMTKNGQMTSNVIGNLKTFSSNELAFLSMLFFGIGLYGNIQFLFIDPQWAKVDAGGFFNVSYIAGSLFFRSL
Ga0186398_1033487	Ga0186398_10334871	F026799	MGATGSCCSCEDDALPGSEDGRRPGRETRKRSPNEFTIVIDRRTGEGLGIDASPEKNGTLEIKNITPGGLVDRWNRSQPPDSREHVMPGNRVIEVNGRYSSAVQLIAACRENEELHITVI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017375: Metatranscriptome of marine eukaryotic communities from McMurdo Sound in HESNW medium w/o silica, 4 C, 30 psu salinity and 283 ?mol photons light - Polarella glacialis CCMP 1383 (MMETSP0227)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences