Sample 3300017378

3300017378: Metatranscriptome of marine algae-associated eukaryotic communities from Gulf of Mexico in L1 medium with seawater, 25 C, 27 psu salinity and 749 ?mol photons light - Karenia brevis SP1 (MMETSP0574)

Overview

Basic Information
IMG/M Taxon OID	3300017378 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0212335 \| Ga0186623
Sample Name	Metatranscriptome of marine algae-associated eukaryotic communities from Gulf of Mexico in L1 medium with seawater, 25 C, 27 psu salinity and 749 ?mol photons light - Karenia brevis SP1 (MMETSP0574)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	117018587
Sequencing Scaffolds	31
Novel Protein Genes	39
Associated Families	30

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar	9
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	4
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	6
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	2
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Gulf of Mexico
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000023	Metagenome / Metatranscriptome	5736	Y
F000070	Metagenome / Metatranscriptome	2710	N
F000076	Metatranscriptome	2620	Y
F000115	Metagenome / Metatranscriptome	2137	Y
F001154	Metatranscriptome	763	Y
F001544	Metagenome / Metatranscriptome	673	Y
F002609	Metagenome / Metatranscriptome	543	Y
F005002	Metagenome / Metatranscriptome	415	Y
F007529	Metagenome / Metatranscriptome	349	Y
F008601	Metatranscriptome	330	Y
F008985	Metatranscriptome	324	Y
F010767	Metagenome / Metatranscriptome	299	Y
F013860	Metatranscriptome	267	Y
F014474	Metatranscriptome	262	Y
F014575	Metatranscriptome	261	Y
F016002	Metatranscriptome	250	Y
F019947	Metatranscriptome	226	Y
F023602	Metagenome / Metatranscriptome	209	Y
F026799	Metagenome / Metatranscriptome	196	Y
F036539	Metatranscriptome	169	Y
F036711	Metagenome / Metatranscriptome	169	Y
F039907	Metatranscriptome	162	Y
F057101	Metagenome / Metatranscriptome	136	Y
F058586	Metatranscriptome	134	Y
F063312	Metatranscriptome	129	Y
F064389	Metagenome / Metatranscriptome	128	Y
F076818	Metatranscriptome	117	Y
F085096	Metagenome / Metatranscriptome	111	Y
F096591	Metatranscriptome	104	Y
F098581	Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0186623_1023921	All Organisms → cellular organisms → Eukaryota → Sar	1470	Open in IMG/M
Ga0186623_1024742	All Organisms → cellular organisms → Eukaryota → Sar	1443	Open in IMG/M
Ga0186623_1026365	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1392	Open in IMG/M
Ga0186623_1028109	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1339	Open in IMG/M
Ga0186623_1032200	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1219	Open in IMG/M
Ga0186623_1035355	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1130	Open in IMG/M
Ga0186623_1038378	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
Ga0186623_1042797	All Organisms → cellular organisms → Eukaryota → Sar	945	Open in IMG/M
Ga0186623_1043141	All Organisms → cellular organisms → Eukaryota → Sar	937	Open in IMG/M
Ga0186623_1043211	All Organisms → cellular organisms → Eukaryota → Sar	935	Open in IMG/M
Ga0186623_1043392	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	931	Open in IMG/M
Ga0186623_1043835	All Organisms → cellular organisms → Eukaryota → Sar	921	Open in IMG/M
Ga0186623_1049755	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	790	Open in IMG/M
Ga0186623_1051328	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	759	Open in IMG/M
Ga0186623_1051831	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	749	Open in IMG/M
Ga0186623_1053466	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Aureococcus → Aureococcus anophagefferens	717	Open in IMG/M
Ga0186623_1054196	All Organisms → cellular organisms → Eukaryota	704	Open in IMG/M
Ga0186623_1054948	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	690	Open in IMG/M
Ga0186623_1055641	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	677	Open in IMG/M
Ga0186623_1056275	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	666	Open in IMG/M
Ga0186623_1058085	All Organisms → cellular organisms → Eukaryota → Sar	635	Open in IMG/M
Ga0186623_1060523	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	595	Open in IMG/M
Ga0186623_1060526	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	595	Open in IMG/M
Ga0186623_1061811	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	576	Open in IMG/M
Ga0186623_1062442	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium	567	Open in IMG/M
Ga0186623_1063483	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	552	Open in IMG/M
Ga0186623_1064204	All Organisms → cellular organisms → Eukaryota → Sar	542	Open in IMG/M
Ga0186623_1065158	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	528	Open in IMG/M
Ga0186623_1065279	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	526	Open in IMG/M
Ga0186623_1066199	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Noctilucales → Noctilucaceae → Noctiluca → Noctiluca scintillans	514	Open in IMG/M
Ga0186623_1066315	All Organisms → cellular organisms → Eukaryota → Sar	512	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0186623_1023921	Ga0186623_10239211	F001544	SSTWLKIASFLQPRDCERVILCSATIEMVAKAKSIKAVGASKGKAQFKLRIGVCVGKDFDPVKKNTQPHNFPKELMLTKEEWGKYSVDAVTALKMKELQADLVDIDIIPGKEISEKRLQKNHVNLTFWPEIGTAILGGNKKQVAEYFKVFQNPDCRLGLSWDYYDWVLNKSRYMTQCKKAGIPMIPTVIYTNGFDPKQCLKDVQKQGWAKFFCKVGHYSFFGGGAIHGKTEDFLAHRAKDLEAYAKEYKTSKVFLLQPFMLKEDGKVFDEVRNFFIDGEWRYSVFTHGTDESDDGYYQEPPGPRKDACKALAIRVYNEILKTSTFEGQKQTPLLNRIDIGVIPKKGADSLHKTDNTYFLNEIEMICTTWLDRYAPVSVADNVATAAFKHSLELLTKMLNAKRKVPDAAHVKKLVTQLNSRLGPYTSIKLK
Ga0186623_1024742	Ga0186623_10247421	F001544	GSRPLGLEIAPALQFGYLSGDIVLLTFKMVAKKKSVTSIKKSATDIKKAAGAVKKEVASKFKLRVGVCVGKDFDPVKKGTQQPNFPQKLCLTDEDWGKYSVDAVTALTMKELHPDVVDIDIIPGSEITEKRLRKNHVNLTFWPEIGTAMMSGKQKQIAEYFKVFKNPENRLSPGWDYYDWVLNKSRYMTQCKKAGIPMIPTVIYTDGFDPEQCLKDVKKQGWEKFFCKVGHYCFFGSGAIHGKTEDFYGKRAEDLKAYAKENKNSKIFLLQPYMLKPNGQVFDEVRNFFIDGQWRYSVFTHGTDETDAGYYQEPDGPRKVACKALAERVYQEILKTSTFAGKKQTPLLNRIDIGVIPKKGGDSLHKTDNDYFLNEVEMICTTWLDRYSPINVSVNVAHAAIKHSLELLTKMLNGKRKMPDAAQVRKVVKQLNERVGPYQSIKLK
Ga0186623_1026365	Ga0186623_10263652	F002609	QCLMVIAYAAAKYFLPEEVQSLVNVVFFVSFIYISIQHIYVDHDVMHGATFPPFKFQQYLTHPFADFISLPWEEFILEHNRHHASTVDLLIQGEFGWDPEEFQYWLQQWSDKWYCLMLTVPLIPVFHFFGLNDTGMLFAFEWWCHFPDEANGGKCNKEFWSKWFPRRVKHNFFVWCVWACVWLIGTIPNGFDLTQGWRFVLPVTIAARCGYGLAWMLITNFNHSLPWNHFLASDPDRAWPVLHNLMALALGGRKRWNEMLFHDVHHAWPNKVGTMSFRGRFHGWEKVHDACVEVLHRGLWVDKGDKETKMQQMQKKRSVCIKKNKRSSLVNLDSVKDITQVWQGA
Ga0186623_1028109	Ga0186623_10281091	F085096	STVYCSCKCWVDLAGAIMRLALLPVVSMATHMPEWFLEKLKNADHSDTYDTCNSPTCEAPPHKYENILPIQPGIQWMQHGGYCGAWSVQRAAMAKGAYISQQQVRDHAKYGGGHDEEILNTNIDGALKKLKIKGEGFEYNVLPEPQSDEYLKFMKKHLVVGNAVIWMVMFSGDSYPDAGYEYDNTTNGIYGHVEPVVGIMSNHPLSDETVHEDDAFAYFDDASKTTYYVTPKRVAGECAFGGRSHCRARCPTGLFGQCVWKERGYIWGIQGFLDERDAVPLTLSISPWASEPYTRGGAKPIEITGTLTATSLRTGSKYDIYRWNSAEEAFVYNDTNKIASFTASSDTHVFEDPSKFLSSSATYYRCVLAGDAAVLV
Ga0186623_1031259	Ga0186623_10312591	F014575	MKIHDRLPTSLLKVRQADEVLDTYMTAYIMGEDLSNMSIYDVLDLKAEMPELYLAWNETKDFVRKTRQDVTSSDGTTEQRTSEELDFALVARVAERVGERFGSFQNEECKQIKASLLNLEEPGTGRVRLSDFYKPAVGGHWQFQESMEYLRQLGALDESDPVKPRVIVANYISSPTNCIASSSFYSVCCMDECEGLLGHLEQQIAAPEATSTQVAKLVSELSSSSVVAPRKLSQSLLDRLGEIAAQHGGRVPLHGRLFAQWMHHAFPRECPFPHLSGTTNPQTPDEWLEATGKDVTATHKEMQVHVDTVEADPSPSLNDADDEEIVLKALPWSPEEELLVVRPPHTENAVGGTFLRNLVMCIVVASVAYGLLGKASTTSKLAQGWSAEKQLV
Ga0186623_1032200	Ga0186623_10322002	F064389	MTGRGSDHCWEVSFLDFPWVLDYILATRFNCSLKQIRHAVCSIVLTLRTILSAAVELGILVSQADGDIDGAVSAKPFTDNMIHVITECLQNFPLCLDSEFFHSFLEPLPSHLRFLCGNFHPLTHMQFEDSAKQKAFEAQTKAITQALSELPSQCSNLELYMSSQEPVLKQIQLIKERLRAPLWMLMHDFRCLQGEEKLLVEDVREAVRAVTDLQERQTGEVTSWPQVMGETLLLLLPLWKLSALAVAKGQDTLARLVARPPIQAGFNAQRLLQRLIEALLSKKADFIDIALWFAQEPSSAALLSSAEAVEFLLPEASNSDEFTQFRKDGLIRVQENFAALQGHIRRLPNQL
Ga0186623_1035355	Ga0186623_10353551	F008601	QVRLKRLSVYCIRQSFASTNFHNFHSIMSCSSVSILSCFTVLILSSFLSVVEANAFLKASPSLREERVSEEDVQSSLLAEVEGAFGEGAASSRVKQLETVLSPIFAALPKNEQGYLGHATVRYALHRLFVQRHGWVIKGLDTEGGHRNSTSSAGLLKEQVPGYIQDLFEKRLGGRGFGLNELAVLAATIEHLVHNEAIKRLGDAMKIHDRLPTSLMNKRQADEVLDTYMTAYIMGEDLSNMTIYDVLDLKAEMPELYLAWNETKDFVRKTRQDVTSSDGTTEQRTSEELDFALVARVAERVGERFGSFQNEECKQIKASLLNLEEPGTGRVLMSDFYKPAVGGHWQFQESVEYLRQLGALDESDPNKPRVIVANYI
Ga0186623_1038378	Ga0186623_10383781	F039907	GGLKLWLCLPLQTCQSKVTMADLPWEGSTALAEVDSGSSVVLLADASGSYYASMTPDGTPLGGTGVAQLTGAMEASVKKGEIKLPSAKDLESFAGQGPLIVDPTTGEVRVGTKAEADSILKDSAKDWPMMVAQVENTLQSSYQAALNYVPAEGGVHPQGGYVAKSGSYYPPAPALMPKDDALTKAPDLFKKSTFAWRSIYHPFVNSVFDPIGDGSIVAEVCFTPTPMRMYTDHRVMGQVVLPGVSHISLAAAVASVGMEGTGFKRNEFSINVHETFFERPYLVNDGNEIIAMVASQQQGGQVNLQQIPGTEMTYCRVARVDKEYGGPAPVKI
Ga0186623_1042797	Ga0186623_10427971	F036539	GTSTAQRLERWADGQCWALRRAPTPSAARSPAAQMAEGVEAFPCGTPAQITGIAAKPELNDQYCVSRGVNPDNPERLNMLLRTGVIMSLRPANLKPAELLPGSRVAVVGLANAQQYNGQSGEVLSWQGDRWIVDLESKERKSFRADNLVILPAAVSRKRPAEEAEVEVKKLKTSDMKDISSDDESVVARTLVRVMREFPILAQKAICVLATKQTVTVQHELAQHLTDKQNDGLLRRELKPREKVRGIEELDAIEQCGVIAERRARTLASMCRINYKDFFGFIKQGFKEPEFNRQRRA
Ga0186623_1043141	Ga0186623_10431411	F016002	RAAGHPQCWLRLASAEAMSMLTPRLDWLLQCTGCSGCDNHHGQAELQIQLSTDLADHNTKHAISRADSFDITFTPRSFGTRSNQMTPRQRDIKETLELPMLHAYPVPPNSTSEEPEEERQRKLLEMYQEFALDLHAGMYLTQLTSNRDYSDIHCQLMEDMQTLKLDQSNGRIIEFPLTGVSKVYRIVKNDDKWYSAGSSVPGFPSSNTEHIVVVEFMRRKLAFVFKELHTSQRFLMCMELLIRRAQQKQAKKALRSLTPALPRQQGARPNSGGVSNR
Ga0186623_1043211	Ga0186623_10432111	F000115	SSSSHPNNGVHCSCVALLIISLPNMMRFACILLAILAAADAGQVKTSLRHLSRAEGFVKALEFKHKLRVCNAYPYAAALDIYRNRGEKLTGETPMQYKSCKDFLSPLKPGDKLEFKVGDASTGTFSVSDLPNNDAVLLLVIHRHDTLSTAVSFESHVFANLQNAQVAVIDTYKGAAKASTRIMDAVAGKKGLKARSEELRYDSVVAVNPGKYSVVLADNAGSTKAKADLVALNKESYVVMRTGVEAQQGQSFPEELIVYPHSDVELLKSGAQMPRVLAAGLISAVLALLC
Ga0186623_1043392	Ga0186623_10433921	F076818	PNSKCLEAFFCHLPFEHQSAIMAFAYAKTIFQNQMLFQSMLGLLCLSCVLAADEPCQSALDNGKINPVSKVSGDLWMVDPFIIPPKGTCKQMPVDGEGKYLNMDFNAYPNITAQCDDRIKFVMRTVSRQQRHGVYLTEFNGDVTADSWPPCPPPVFNDEKFCDVRLNESDQKDTQCQGYTQLYPLLMFGPNDTIIKEYTTPTLRSMVAAGKDTDVLVFSCPWIKGRRGTSGIYKSHCIEGMFVQVTVQGCGTQSTSNAGSVEGSAASLLVVFVATVINHFG
Ga0186623_1043835	Ga0186623_10438351	F000115	LAQASSPSHIEVESAESRLSVMFRTLISLASVAVAAAGQVKTSLRHLSRAEGFVKALEFQHQLRVCNAYPYAASLDVYRNKGEKLTSDAAMSYKSCKDFRTPLQTGDKLEFKVGDASTGTFSVSDLPNFDAVLLLVIHRHDTLSTAVAFESHIFSNLQNAQVAVIDTYKGAARASTKIMDIVDALKSKNGSRSEDLRYDSVVAVNPGKYEVVLADQTGATKAKANLVALNKQSYVVLRTGVEAQQGHSFPEELVVYPQSDPSMLQSAASARSVLTAFLVAALGVGFML
Ga0186623_1047226	Ga0186623_10472261	F036711	SSSQVATPTPARGALLSPLSLSARASREGASGCEAERAAAGGIREYHLFGASASVMPVWQNVNLKQKAIFEIIQREDTRDLPYYLNDEELDFFIRGIACGPHAKTYLPQLVEREKSPIYIARGYAPPTYSRVVKIRFYGPDPLLKDAGPNWPAGKPGELMEYIIGWRWLYAYWDGPLVDEVDEAWDTKQWPDIARDNWTWENLRFVTPPYWVPEDGKPWRAGRSDALPLRVTKGKGKGKAPGKGSADDEASGKGTK
Ga0186623_1049755	Ga0186623_10497551	F058586	SLSTKWDRFQSLSAATKLMEQHGVKLTPEEEERFANMNEMQMIDALVNKMPQQSKEQFQHFFLQLQLIVSTATRVRQALEEGKADAVEGAMEDADRTGIAQYILKMAIVQAGSEVQKLKAMHEAFVKDAESKMSRLVRGQEDAIQAKKKLAKAQSQLVEFQTSANEHIKKVLMAFTSGSGTAMVSAIFSTWRSHVKKMKQENAIFIEYRDRIEIAEQRLIDAKAQQLSSVRKMLTKKAQGFESQLLADAFGYFKEERENAIFE
Ga0186623_1051328	Ga0186623_10513281	F010767	WLKSSRAGLIAQIRVREMSLMAGSADSEAAAQGCHCLEFDSWWNEGNNRRYVYIRYNISEGAFQIAIDEDSNLYHVPVVYGARTGEAVTVWDLFVGAEVDILGRLTTLQHCSQMTAQWNKYWADRLISLREKLLEELRKYEIRKNEPWVTFQKAHAHSGSQDLRLIMAQVSELSLALAEYRPRLAEKYCVPKEMYEIEEMHRQQPKGPKH
Ga0186623_1051831	Ga0186623_10518311	F063312	MPEYILATNANNKATELPLCRIQGSVQKNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLFPPESNPKRKAYLKFKNLKTEKFYCRYGKNDKDKPTDCKPPPAEITSRDCSLPSTSTTNCATKDELNPYDPTVLTKCVCTGGTECKSVLANAGVASVGSTIFVRVALGTLLERFGPVNVQSSLLLFGAIWVFAAAGISAPWNY
Ga0186623_1052243	Ga0186623_10522432	F000023	MADLEARVVALERAIGAGGAEGDGDSGLLPARRATGNDAQILKKVSTRLQDFEAQITAQLSNMQSDFDKKLSHVNRGASSMKPLDAAGASAGLDTMAEDLDQLKYDVGELKDLLSNNKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENL
Ga0186623_1052338	Ga0186623_10523381	F000070	HDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNIADTEARLKNDIRQKQQEAFEKIGAVEQQAELRSAEASRRLGALDLRMSGVQGGLGEHKRDILKLREEVNGLTVKSASHEVDIQKNSDAC
Ga0186623_1053466	Ga0186623_10534661	F063312	FWLKPFCFTSLLAQSPNTITGCNPFSFSRTLAMPEYKLATNANNKATELPLCRIQGSVQKNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLFPPESNPKRKAYLKFKNLKTEKFYCKYGKNDKDKPTDCKPPPPETEAKCVLTGATKDECNHPYDPKVLTKCVCTGGTECKSVLANAGVASVGSTIFVRVALGTLLERFGPVNVQSSLLLFGAIWVFAAAGISAPWNY
Ga0186623_1054196	Ga0186623_10541961	F019947	MPVLSIPADKPKLAFYATMMAIQNFGFGMMYFMMWQHIPSSDDCADLWKWVGFFALDCFVESFVCVWMAMGGYTDDSCLFCVMWFLHLIVALPYCLCTVTIPLAMFSDDGKACRELAGAPLAPLVPLYWVHAALFMVYVWMMLSVTYFSWAKATLFGVEALE
Ga0186623_1054948	Ga0186623_10549481	F013860	GSRARVPCPFHTALKALVSFRSRLASFGILDSAMSRGARSVSAVGVRSADESGVNYLRGSKVGSATGYIAVAGSILALPHGTRSRSLGGSRTRFDAVSEQAHQFREIPHCFASMDRKPLSPYNPLSYRSRLAIDDAPVPVKNSSTIEFADGIHTCHKRRFVTTNDQFFTGEPCDPRSNQGILAESTRFRKSQQAK
Ga0186623_1055641	Ga0186623_10556411	F098581	SAGLLKEQVPGYIQDLFEKRLGGRGFGLNELAVLAATIEHLVHNEAIKRLGDAMKIHDRLPTSLMNKRQADEVLDTYMTAYIMGEDLSNMTIYDVLDLKAEMPELYLAWNETKDFVRKTRQDVTSSDGTTEQRTSEELDFALVARVAERVGERFGSFQNEECKQIKASLLNLEEPGTGRVLMSDFYKPAVGGHWQFQESVEYLRQLGALDESDPNKPRVIVANYI
Ga0186623_1055643	Ga0186623_10556432	F000076	LAQAILFQPVGFLWQFYFVPAGPYLAMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPCTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0186623_1055885	Ga0186623_10558851	F096591	GIIFDDESAEARAHTRVALRALGVTASVWNALQEQRSGARAAARDGAAGAPKGPAFHLMPSDLVVLKVDLPQVRCVLHFEVPRRELSIYGLRLMCLEQQDQKKSRKAGLGGKSLSVLFVEDAEVVRELEKTFHVRMHEVPTEMMPN
Ga0186623_1055892	Ga0186623_10558921	F057101	MMPGMMPGMPGMPGMPGMAKQPKADKAPEPEPQQDDGKIDPDVQELGDYFSIEDRWIVRLNETMKKRQDTKEQDLAKLYEVLERARSPTGLLTVKIGEMESGQFVGKIKHDKDVERLAKKFKLDEHVKSRLTELSVRRKDTKDEDLDRLEQHLNYCKQPNAMAKLLEGQVDTLPDMVEAEKVMDKYRLDDGAKSKLREIVEKRAEDKEEVLNEVRRQLDGSHNP
Ga0186623_1056275	Ga0186623_10562751	F036711	AVACARRCRMPVWQNINLKQKAIFEIIQRPHARELPYYLEGDELDFFIRGIAWGPHRDTYLPQLVERHKRPIHVARGYAPPTYSRLVKLRFYGPDPVLKDHDGWDAGDEGEVMEYVIGWRWLYAYWPGPLVDEVERAWDTPMWPTLASPDWTWEGLKFCVPPYYVPEDGLPWRSGRDIEYQPIRVTKGKGKGKLRDGAAEKAVGRGVAAAAPGASSQASSR
Ga0186623_1057070	Ga0186623_10570701	F000076	AQAQTTSQLAPLHNFGDFSEAMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPCTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0186623_1058085	Ga0186623_10580851	F014474	LKSPRRAARRAARDALWRALEAHSSLSSALANMVKIPTANVPAPQTTADCNKFKYGIKQEMKLTYADAKKRSSSVPNLHAKNAYFAYFRDHEGPKISHEHQFTYDQVKDSTACHSRVPKDTFHPTHNEASRRRCNSRLHTVWQIRSSQSYGWLPPIDNPKYGFGRSSLFQADSMDKSHLQVGGGH
Ga0186623_1060523	Ga0186623_10605231	F063312	MPEFKLVVNDNNKATELPLCRIGGSVQANPHMRAFWGATISFFLAFLGWFALAPLALDVAKSMEICENQLYPPLENPKRKAYLKFKNLKTEKFYCRYGKNNKNKPTDCNPVPDDVMSKPICSATVTENCANQDDRSAYDPKVLTKCVCTGGTECKSVLANAGVASVASTIFVRVA
Ga0186623_1060526	Ga0186623_10605261	F063312	MPEFKLVVNDNNKATELPLCRIGGSVQANPHMRAFWGATISFFLAFLGWFALAPLALDVAKSMEICENQLYPPLENPKRKAYLKFKNLKTEKFYCRYGKNNKNKPTDCKPVPEEIKNKPNCSATVATNCNTQDDLSPYDPTVLTKCVCTGGTECKSVLANAGVASVASTIFVRVA
Ga0186623_1061811	Ga0186623_10618111	F023602	ALRIARVAKGNINLAEYKSCMLASLRSLLPKSWDSAHEVAWTWLWENVERLVLRIHGQPPVWEKALGKILGSLDEESKFELRKEIYARFFNLAPAGQDFFKQSNTYLHFIADKILDMTLQIYQNPVKMVDDISALGLRHVGYGIPTELFGPFVTACVEVLMGRTSDETTVESFRWSLGLISKMLVRTITEGC
Ga0186623_1062442	Ga0186623_10624421	F005002	FGSSAPALPALSQHFRNRFPALRSDRMAMKLLSTVLAMLLVSVAAYPVYSPDAGEDVDTCSGITCKTVECKPPFVWKSAKDVGTCCPVCFAESVKVPEDRSWTAGLSGGVGMNNNADSILCRGVMCPPLHCPEFEQIFDDRCCTKCKSAAATTPADLAK
Ga0186623_1063483	Ga0186623_10634831	F063312	AQAISGQAFCKFPKLRSQVERPCSFSIAAMPEYKLACNANNKATELPLCRIGGSVQSNPHMRAFWASTISFFLAFLGWFALAPLALDVAKSMEICENQLYPPEDYPKRKAYLKFKNLKTEKFYCPYGKNNKDKPTDCKPPPDEILNKPKCTAGVTTNCATEDELKQYDPSVLTKCVCTGGTECK
Ga0186623_1064204	Ga0186623_10642041	F026799	TFSQSIARGVRALWLALYLIPGLAGCSAMGAHGSCCSCEDENSSSYIDGDGKKKGGIRKRTPGEFVIVIDRRTGEGLGIDASPEKDGTLEIRSITPGGLVERWNQAHDSRQHAAVQVHPGMRIIEVNGRYNSAMQLIAACRECEVLHMTVRPD
Ga0186623_1065158	Ga0186623_10651581	F007529	DFFKQSNTYLHFIAERLMIMTIDMYRDPVRMVDDISALGLRHVGYGIPTELFGPFVSACVEVVQSVTADSDAVESFRWSLGLIAKTLVRTITEGSTIVMKAVNSNSIRQLKKAIGCAPRGERATWCLIVQVGTQDISPLSWSIESGAMEAASAMITDLLTVRADRDRYYYSMDQLF
Ga0186623_1065279	Ga0186623_10652791	F008985	MKIHDRLPTSLLKKRQADEVLDTYMTAYIMGEDLSNMTIYDVLDLKAEMPELYLAWNETKDFVRKTRQDVTSSDGTTEQKTSEELDFALVARVAERVGERFGSFQNEECKQIKASLLSLEEPGTGRVRLSDFYKPAVGGHWQFQESVEYLRQLGALDESDPNKPRVIVANYI
Ga0186623_1066199	Ga0186623_10661991	F007529	SNTYLHFIAERLMIMTIDMYRDPVRMVDDISALGLRHVGYGIPTELFGPFVSACVEVVQSVTPDGDAVESFRWSLGLIAKTLVRTITEGSTIVMKAVNSNSIRQLKKAIGCAPRGERATWCLIVQVGTQDISPLSWSIESGAMEAASAMITDLLTVRADRDRYYYSMDQLF
Ga0186623_1066315	Ga0186623_10663151	F001154	LAQECLIQWHCSQREFALLLLLTNKMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDITEEKLKEVIQLPPITIENCHEREDGDLQWDEITFEEEVSGKYWHAVIMALHRLREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017378: Metatranscriptome of marine algae-associated eukaryotic communities from Gulf of Mexico in L1 medium with seawater, 25 C, 27 psu salinity and 749 ?mol photons light - Karenia brevis SP1 (MMETSP0574)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences