Sample 3300026133

Overview

Basic Information
IMG/M Taxon OID	3300026133 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114514 \| Gp0125955 \| Ga0209940
Sample Name	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D1_MG (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	169963205
Sequencing Scaffolds	30
Novel Protein Genes	31
Associated Families	26

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1
Not Available	11
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp. BuS5	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → wetland area → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	South San Francisco, USA
Coordinates	Lat. (^o)	37.4972	Long. (^o)	-122.1293	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001488	Metagenome / Metatranscriptome	686	Y
F008719	Metagenome / Metatranscriptome	329	Y
F018371	Metagenome / Metatranscriptome	235	Y
F031503	Metagenome / Metatranscriptome	182	Y
F037736	Metagenome / Metatranscriptome	167	Y
F039700	Metagenome / Metatranscriptome	163	Y
F040630	Metagenome	161	Y
F042909	Metagenome	157	Y
F044506	Metagenome / Metatranscriptome	154	Y
F045765	Metagenome / Metatranscriptome	152	N
F047065	Metagenome / Metatranscriptome	150	Y
F053305	Metagenome / Metatranscriptome	141	Y
F053306	Metagenome / Metatranscriptome	141	Y
F056621	Metagenome	137	Y
F059980	Metagenome / Metatranscriptome	133	Y
F059981	Metagenome / Metatranscriptome	133	Y
F070131	Metagenome / Metatranscriptome	123	Y
F072360	Metagenome / Metatranscriptome	121	Y
F078733	Metagenome	116	Y
F081352	Metagenome / Metatranscriptome	114	Y
F084253	Metagenome	112	Y
F084254	Metagenome / Metatranscriptome	112	Y
F092076	Metagenome / Metatranscriptome	107	Y
F099323	Metagenome / Metatranscriptome	103	N
F099324	Metagenome / Metatranscriptome	103	Y
F100426	Metagenome	102	Y

Family

Category

Number of Sequences

3D Structure?

F001488

Metagenome / Metatranscriptome

686

F008719

Metagenome / Metatranscriptome

329

F018371

Metagenome / Metatranscriptome

235

F031503

Metagenome / Metatranscriptome

182

F037736

Metagenome / Metatranscriptome

167

F039700

Metagenome / Metatranscriptome

163

F040630

Metagenome

161

F042909

Metagenome

157

F044506

Metagenome / Metatranscriptome

154

F045765

Metagenome / Metatranscriptome

152

F047065

Metagenome / Metatranscriptome

150

F053305

Metagenome / Metatranscriptome

141

F053306

Metagenome / Metatranscriptome

141

F056621

Metagenome

137

F059980

Metagenome / Metatranscriptome

133

F059981

Metagenome / Metatranscriptome

133

F070131

Metagenome / Metatranscriptome

123

F072360

Metagenome / Metatranscriptome

121

F078733

Metagenome

116

F081352

Metagenome / Metatranscriptome

114

F084253

Metagenome

112

F084254

Metagenome / Metatranscriptome

112

F092076

Metagenome / Metatranscriptome

107

F099323

Metagenome / Metatranscriptome

103

F099324

Metagenome / Metatranscriptome

103

F100426

Metagenome

102

Scaffold	Taxonomy	Length	IMG/M Link
Ga0209940_1003373	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
Ga0209940_1006637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1868	Open in IMG/M
Ga0209940_1012198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1402	Open in IMG/M
Ga0209940_1014679	Not Available	1283	Open in IMG/M
Ga0209940_1015746	Not Available	1236	Open in IMG/M
Ga0209940_1018616	Not Available	1138	Open in IMG/M
Ga0209940_1019047	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
Ga0209940_1019260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1117	Open in IMG/M
Ga0209940_1021426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	1060	Open in IMG/M
Ga0209940_1023152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp. BuS5	1018	Open in IMG/M
Ga0209940_1025712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	965	Open in IMG/M
Ga0209940_1026934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium PC51MH44	942	Open in IMG/M
Ga0209940_1031322	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
Ga0209940_1032692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	854	Open in IMG/M
Ga0209940_1035871	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
Ga0209940_1041368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	755	Open in IMG/M
Ga0209940_1043891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	732	Open in IMG/M
Ga0209940_1047273	Not Available	705	Open in IMG/M
Ga0209940_1048232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	697	Open in IMG/M
Ga0209940_1052050	Not Available	670	Open in IMG/M
Ga0209940_1057952	Not Available	634	Open in IMG/M
Ga0209940_1063033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	608	Open in IMG/M
Ga0209940_1066177	Not Available	592	Open in IMG/M
Ga0209940_1072349	Not Available	566	Open in IMG/M
Ga0209940_1073317	Not Available	562	Open in IMG/M
Ga0209940_1076690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium	549	Open in IMG/M
Ga0209940_1077780	Not Available	545	Open in IMG/M
Ga0209940_1082479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	528	Open in IMG/M
Ga0209940_1083791	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
Ga0209940_1091068	Not Available	502	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0209940_1003373

All Organisms → cellular organisms → Bacteria

2504

Open in IMG/M

Ga0209940_1006637

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales

1868

Open in IMG/M

Ga0209940_1012198

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria

1402

Open in IMG/M

Ga0209940_1014679

Not Available

1283

Open in IMG/M

Ga0209940_1015746

Not Available

1236

Open in IMG/M

Ga0209940_1018616

Not Available

1138

Open in IMG/M

Ga0209940_1019047

All Organisms → cellular organisms → Bacteria

1124

Open in IMG/M

Ga0209940_1019260

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium

1117

Open in IMG/M

Ga0209940_1021426

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18

1060

Open in IMG/M

Ga0209940_1023152

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp. BuS5

1018

Open in IMG/M

Ga0209940_1025712

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium

965

942

All Organisms → cellular organisms → Bacteria

873

Open in IMG/M

Ga0209940_1032692

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

854

Open in IMG/M

Ga0209940_1035871

All Organisms → cellular organisms → Bacteria

813

Open in IMG/M

Ga0209940_1041368

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

755

Open in IMG/M

Ga0209940_1043891

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium

732

Open in IMG/M

Ga0209940_1047273

Not Available

705

Open in IMG/M

Ga0209940_1048232

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

697

Open in IMG/M

Ga0209940_1052050

Not Available

670

Open in IMG/M

Ga0209940_1057952

Not Available

634

608

Not Available

592

Open in IMG/M

Ga0209940_1072349

Not Available

566

Open in IMG/M

Ga0209940_1073317

Not Available

562

Open in IMG/M

Ga0209940_1076690

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → unclassified Desulfobulbaceae → Desulfobulbaceae bacterium

549

Open in IMG/M

Ga0209940_1077780

Not Available

545

Open in IMG/M

Ga0209940_1082479

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium

528

Open in IMG/M

Ga0209940_1083791

All Organisms → cellular organisms → Bacteria → Proteobacteria

524

Open in IMG/M

Ga0209940_1091068

Not Available

502

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0209940_1003373	Ga0209940_10033731	F084253	KAALVLAVRRTSVRRSRKPAENAEQDKKGHLWMETN
Ga0209940_1006637	Ga0209940_10066372	F081352	MFSANVSLMIRLIRKISAITLTCLLALNLAAGAVVVVEHCPSSMASSSPIDMSHCDGLLNFAFPIQGCCGKCGDIFCDLIKNPLQDANVVKPSPFQGSCYPFFLGTVDPIAESGAWIGLSEPKNLFFGTLAWSQIPLYIENLTLVI
Ga0209940_1012198	Ga0209940_10121981	F001488	LRQIKKQNVKEKQNMARLELTLNFPKSFQIKTFNVKSEKTLSPLAKLILQSVQFKHFYYVRDDISYLLKSNPVERDFLLQALYSTVISLQNNLSINFFDMWVYEIYINKVSTHNKFMNQKSQNLEPDEYITIKLAYGSSVSQEKK
Ga0209940_1014679	Ga0209940_10146791	F084254	ESMVIEIMAEVIRQSKRHPRADQVASALAMRGLPIAQKDVMTVFDQYDIEKKIVDTY
Ga0209940_1015746	Ga0209940_10157462	F044506	MQCWINGPATGGIDDKIKMVNILLKTNIPSFHPSIIPFPGQIQMPQKTSIFSVGSRNSETFN
Ga0209940_1018616	Ga0209940_10186161	F031503	MERQEMMELFKATADIQSPEGLAAYRAFAAALTTPILQKIELESIMRQLFAVERLGPGAQAVYPIAEDFEIPVWVLPGLGYVAQNFIEGIGEEVYVPTFTIDASADWKITYARDSRIDIPQRAAARAAKDLANYEEECGWRVIMPAATSAFSGKGLLGSRPAPIYEINPTGTGAGYLSKELINKMMVGFKRTGRTLTDLYVSPEDAADIRE
Ga0209940_1019047	Ga0209940_10190472	F042909	MVELLNFIGSLNLWTFIVIWTSTIFLVIFISLLLFCVSQMNKETIKISQKVKILIEGLSEKKINV
Ga0209940_1019260	Ga0209940_10192602	F045765	VTYHSSKGENTTRIKIDDKLYDLLRKFCDKEGRRLKDFVEDALENAIYTDESIKILNAEIKSLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLGPDDEEYEILKNDPFRISKGAQLDLFR
Ga0209940_1021426	Ga0209940_10214262	F070131	MMGKMLTKISIIGVLAFCFLMQVDLAGGDNRIYGQNKKKSNVPMEIELHFSSTPLLNEYTVLNVEIRSLKDAPNTLIDIKLPSDGFKLISGDTQLNEDLSSGSTTIYQIEVLPAALGQYKISASAISGETDYIFGKREELYVNIGEEFSELSKSSFIPEIADNRSEATKIGNISEPPAEVLSDQKPKEGQDILYFAAPGKGQIAVRGSWVYQDKTGNDRPLRDAMVEIWDADSSGDTLLDTTFTDNSGYYISDNISNSDEEGGGQDIYVKVYSTDNRSVRVTDF
Ga0209940_1023152	Ga0209940_10231521	F037736	VPYRVQLDGLQILWLLANPLRTHGIGESGSKTITGWLLMGAADANHIWWLNTNPFTGLLLHLNSYRIRHL
Ga0209940_1025712	Ga0209940_10257122	F078733	VSALTHKFGLEIDLTSPEARHPDHKHAFEAKILRKDGINHVEFSKEHPGIIVVEYDPSITTPDAIYLKVKRLNGNIKRKVFL
Ga0209940_1026934	Ga0209940_10269341	F072360	MLLSGMNRKLDILMVFSHKALCIAFTLLITLSLSAGGVLANSCQGGPDCINCATAVHPHIPGMDMEMVNQGCQSAEQNSSCGFKSSTSADDFYSMAAVVKSCTQPYFGIFTAASDESDQTHLFRKLISQFQYPDRGELTPIYLLNLSLLC
Ga0209940_1031322	Ga0209940_10313221	F056621	MNDKERFALAERVQKRVQEEHPHFQLIKRKDEIEKQLKK
Ga0209940_1032692	Ga0209940_10326922	F092076	MFTHKIDKLQGIIFARVSGTPTIVLMIDHIQNVLNDPDFDPKYNSIIVFEENTRIAGFPKDEIETIRHILDGYAQQRTGRNWAVVAPNERQEAFLKLNLELISPVKFNIRIFQSEEDALNWIKGR
Ga0209940_1035871	Ga0209940_10358713	F039700	MPLFEVAIIEKPTKKEMEEGVPEKLVFGPKAIIANDTQSAGIAAVMDEKIECNRQRMQVIVRPFA
Ga0209940_1041368	Ga0209940_10413681	F008719	PGVSNLGMTVESYAGDWLRVKQIAERIEVKMAYDMKVVGPDLGYFFEAVVA
Ga0209940_1043891	Ga0209940_10438912	F100426	MARNRIIYASQSVWCNGEVLYRVQSLGSTTTFTSEDIFELGHLDIIDVVDDVPAVAVTLNTNDFGDLRTLATLAQLAPAKKVMEATATDNNGNLVVVSGT
Ga0209940_1047273	Ga0209940_10472731	F047065	KAVSSSKTLMWECVKQAYADHLSDISRDDLPEEIQIFYDSVKLRVTSVEPPGYIGNDEAIYIANDIMYLADVINSGLRKS
Ga0209940_1048232	Ga0209940_10482322	F059980	HLMEEACSMGFSGGFEQGKPETALPELIRFIPGNVKRVNPQNRFCCG
Ga0209940_1052050	Ga0209940_10520502	F042909	MVELLTFIGSLNLGIFITLWTSTIILVIFISLLLVFVSQMNKETIKINKKVKILIDALSEKKTKLGEDDI
Ga0209940_1054417	Ga0209940_10544171	F099323	MLAVWHKFKAFLGHRLILEIAIVGSFIAFTINPGSLGDIMRACGAIFLFNVLIGNYRIGDVTEGHLVVLGIFLITLLINAFMPDEMIHPRSFRYFLALPGMILAIHCFSKRTKPDSRTLLFYCSIAVLAVTIQFVAYHTVERVVNSGGLESYGLSGNMHHFGSYAGLILPVLFYFSTQVKGWLRLLCVAGVIVAFYL
Ga0209940_1057952	Ga0209940_10579522	F018371	MAINNVIQPNRLTNMQEMEVHVNGPDGANRMFIYSGMAEVELTGGLPHPRWSLEVVCFDVGRSYDVENEEVINIVATSSLAGSRTDGVASFAGWQIFGAAGELDEESGRVRMNIAAGARDTQAFLEQISFQVTVLARVK
Ga0209940_1063033	Ga0209940_10630331	F045765	MQYHSSKGEHTTTIKIDERLYDLLRKFCDKEGRRLKDFVEDAIENAIYTEESIKILNEEIKSLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLEPGDEAFEILKNDPFRISRGAQLDLFR
Ga0209940_1066177	Ga0209940_10661772	F042909	MVDLINFIGNLNLGTFIVIWTSTIFSVIFIILLLFSVSQMNKETIKISKKVKILIEGLSEKLALGNDDIIF
Ga0209940_1072349	Ga0209940_10723491	F059981	FKSQDIGAMEQPTIKCIFCGGIANIKEQDHLKIISCPKCKRETAAKTYQDLFDLWMGDIRDEEQ
Ga0209940_1073317	Ga0209940_10733171	F053305	MLKKSLSLVLIAVFALSLIAVATLSAAETQKITGTVMSVNAETGEVIVKDAAGETKTLMADPKAEGAVDIKMLKEGDSVNVESDSDGVIKSIQAE
Ga0209940_1076690	Ga0209940_10766901	F099324	MFKQIIFVIMLGWVLVLSGCAAVDKGHNIEGEDYRGGYPPRGGYTRTTQHKALVSEACNIEANNLAGDKDFMADDRARRVYFSQCMQRNGYNAAGNYVGIPPK
Ga0209940_1077780	Ga0209940_10777801	F047065	MTNLLNKFSEAAKVVSSSKTHMWECVYGAYVDHLSDISTDSLPEEIQIFYDSVKLRITSVEALGHIDNDEAGYIANDIMYMAD
Ga0209940_1082479	Ga0209940_10824791	F053306	MQGSVIMRTKLISTLSLALVLSACGQPEPISYESLAWVNNYYVEHPVASMSASAGGWLFRGAREFDSEIRVGFLVPGSMNPDPAKRQAVLNSLCPARSESIWQALPKNNK
Ga0209940_1083791	Ga0209940_10837911	F040630	LFGILNFGHCDLPFDLAQGGESFDSAQDRKPVERLVEPFGIWV
Ga0209940_1091068	Ga0209940_10910682	F040630	PNYNIQISNKIKRQLFGILNFGHCDLPFDLAQGGGESFDFAQDREPVERLGICVLLFEILYY

Scaffold ID

Protein ID

Family

Sequence

Ga0209940_1003373

Ga0209940_10033731

F084253

KAALVLAVRRTSVRRSRKPAENAEQDKKGHLWMETN

Ga0209940_1006637

Ga0209940_10066372

F081352

MFSANVSLMIRLIRKISAITLTCLLALNLAAGAVVVVEHCPSSMASSSPIDMSHCDGLLNFAFPIQGCCGKCGDIFCDLIKNPLQDANVVKPSPFQGSCYPFFLGTVDPIAESGAWIGLSEPKNLFFGTLAWSQIPLYIENLTLVI

Ga0209940_1012198

Ga0209940_10121981

F001488

LRQIKKQNVKEKQNMARLELTLNFPKSFQIKTFNVKSEKTLSPLAKLILQSVQFKHFYYVRDDISYLLKSNPVERDFLLQALYSTVISLQNNLSINFFDMWVYEIYINKVSTHNKFMNQKSQNLEPDEYITIKLAYGSSVSQEKK

Ga0209940_1014679

Ga0209940_10146791

F084254

ESMVIEIMAEVIRQSKRHPRADQVASALAMRGLPIAQKDVMTVFDQYDIEKKIVDTY

Ga0209940_1015746

Ga0209940_10157462

F044506

MQCWINGPATGGIDDKIKMVNILLKTNIPSFHPSIIPFPGQIQMPQKTSIFSVGSRNSETFN

Ga0209940_1018616

Ga0209940_10186161

F031503

MERQEMMELFKATADIQSPEGLAAYRAFAAALTTPILQKIELESIMRQLFAVERLGPGAQAVYPIAEDFEIPVWVLPGLGYVAQNFIEGIGEEVYVPTFTIDASADWKITYARDSRIDIPQRAAARAAKDLANYEEECGWRVIMPAATSAFSGKGLLGSRPAPIYEINPTGTGAGYLSKELINKMMVGFKRTGRTLTDLYVSPEDAADIRE

Ga0209940_1019047

Ga0209940_10190472

F042909

MVELLNFIGSLNLWTFIVIWTSTIFLVIFISLLLFCVSQMNKETIKISQKVKILIEGLSEKKINV

Ga0209940_1019260

Ga0209940_10192602

F045765

VTYHSSKGENTTRIKIDDKLYDLLRKFCDKEGRRLKDFVEDALENAIYTDESIKILNAEIKSLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLGPDDEEYEILKNDPFRISKGAQLDLFR

Ga0209940_1021426

Ga0209940_10214262

F070131

MMGKMLTKISIIGVLAFCFLMQVDLAGGDNRIYGQNKKKSNVPMEIELHFSSTPLLNEYTVLNVEIRSLKDAPNTLIDIKLPSDGFKLISGDTQLNEDLSSGSTTIYQIEVLPAALGQYKISASAISGETDYIFGKREELYVNIGEEFSELSKSSFIPEIADNRSEATKIGNISEPPAEVLSDQKPKEGQDILYFAAPGKGQIAVRGSWVYQDKTGNDRPLRDAMVEIWDADSSGDTLLDTTFTDNSGYYISDNISNSDEEGGGQDIYVKVYSTDNRSVRVTDF

Ga0209940_1023152

Ga0209940_10231521

F037736

VPYRVQLDGLQILWLLANPLRTHGIGESGSKTITGWLLMGAADANHIWWLNTNPFTGLLLHLNSYRIRHL

Ga0209940_1025712

Ga0209940_10257122

F078733

VSALTHKFGLEIDLTSPEARHPDHKHAFEAKILRKDGINHVEFSKEHPGIIVVEYDPSITTPDAIYLKVKRLNGNIKRKVFL

Ga0209940_1026934

Ga0209940_10269341

F072360

MLLSGMNRKLDILMVFSHKALCIAFTLLITLSLSAGGVLANSCQGGPDCINCATAVHPHIPGMDMEMVNQGCQSAEQNSSCGFKSSTSADDFYSMAAVVKSCTQPYFGIFTAASDESDQTHLFRKLISQFQYPDRGELTPIYLLNLSLLC

Ga0209940_1031322

Ga0209940_10313221

F056621

MNDKERFALAERVQKRVQEEHPHFQLIKRKDEIEKQLKK

Ga0209940_1032692

Ga0209940_10326922

F092076

MFTHKIDKLQGIIFARVSGTPTIVLMIDHIQNVLNDPDFDPKYNSIIVFEENTRIAGFPKDEIETIRHILDGYAQQRTGRNWAVVAPNERQEAFLKLNLELISPVKFNIRIFQSEEDALNWIKGR

Ga0209940_1035871

Ga0209940_10358713

F039700

MPLFEVAIIEKPTKKEMEEGVPEKLVFGPKAIIANDTQSAGIAAVMDEKIECNRQRMQVIVRPFA

Ga0209940_1041368

Ga0209940_10413681

F008719

PGVSNLGMTVESYAGDWLRVKQIAERIEVKMAYDMKVVGPDLGYFFEAVVA

Ga0209940_1043891

Ga0209940_10438912

F100426

MARNRIIYASQSVWCNGEVLYRVQSLGSTTTFTSEDIFELGHLDIIDVVDDVPAVAVTLNTNDFGDLRTLATLAQLAPAKKVMEATATDNNGNLVVVSGT

Ga0209940_1047273

Ga0209940_10472731

F047065

KAVSSSKTLMWECVKQAYADHLSDISRDDLPEEIQIFYDSVKLRVTSVEPPGYIGNDEAIYIANDIMYLADVINSGLRKS

Ga0209940_1048232

Ga0209940_10482322

F059980

HLMEEACSMGFSGGFEQGKPETALPELIRFIPGNVKRVNPQNRFCCG

Ga0209940_1052050

Ga0209940_10520502

F042909

MVELLTFIGSLNLGIFITLWTSTIILVIFISLLLVFVSQMNKETIKINKKVKILIDALSEKKTKLGEDDI

Ga0209940_1054417

Ga0209940_10544171

F099323

MLAVWHKFKAFLGHRLILEIAIVGSFIAFTINPGSLGDIMRACGAIFLFNVLIGNYRIGDVTEGHLVVLGIFLITLLINAFMPDEMIHPRSFRYFLALPGMILAIHCFSKRTKPDSRTLLFYCSIAVLAVTIQFVAYHTVERVVNSGGLESYGLSGNMHHFGSYAGLILPVLFYFSTQVKGWLRLLCVAGVIVAFYL

Ga0209940_1057952

Ga0209940_10579522

F018371

MAINNVIQPNRLTNMQEMEVHVNGPDGANRMFIYSGMAEVELTGGLPHPRWSLEVVCFDVGRSYDVENEEVINIVATSSLAGSRTDGVASFAGWQIFGAAGELDEESGRVRMNIAAGARDTQAFLEQISFQVTVLARVK

Ga0209940_1063033

Ga0209940_10630331

F045765

MQYHSSKGEHTTTIKIDERLYDLLRKFCDKEGRRLKDFVEDAIENAIYTEESIKILNEEIKSLKKKEAKYDYAFRRGFQKGFYISFCALHGQILLEPGDEAFEILKNDPFRISRGAQLDLFR

Ga0209940_1066177

Ga0209940_10661772

F042909

MVDLINFIGNLNLGTFIVIWTSTIFSVIFIILLLFSVSQMNKETIKISKKVKILIEGLSEKLALGNDDIIF

Ga0209940_1072349

Ga0209940_10723491

F059981

FKSQDIGAMEQPTIKCIFCGGIANIKEQDHLKIISCPKCKRETAAKTYQDLFDLWMGDIRDEEQ

Ga0209940_1073317

Ga0209940_10733171

F053305

MLKKSLSLVLIAVFALSLIAVATLSAAETQKITGTVMSVNAETGEVIVKDAAGETKTLMADPKAEGAVDIKMLKEGDSVNVESDSDGVIKSIQAE

Ga0209940_1076690

Ga0209940_10766901

F099324

MFKQIIFVIMLGWVLVLSGCAAVDKGHNIEGEDYRGGYPPRGGYTRTTQHKALVSEACNIEANNLAGDKDFMADDRARRVYFSQCMQRNGYNAAGNYVGIPPK

Ga0209940_1077780

Ga0209940_10777801

F047065

MTNLLNKFSEAAKVVSSSKTHMWECVYGAYVDHLSDISTDSLPEEIQIFYDSVKLRITSVEALGHIDNDEAGYIANDIMYMAD

Ga0209940_1082479

Ga0209940_10824791

F053306

MQGSVIMRTKLISTLSLALVLSACGQPEPISYESLAWVNNYYVEHPVASMSASAGGWLFRGAREFDSEIRVGFLVPGSMNPDPAKRQAVLNSLCPARSESIWQALPKNNK

Ga0209940_1083791

Ga0209940_10837911

F040630

LFGILNFGHCDLPFDLAQGGESFDSAQDRKPVERLVEPFGIWV

Ga0209940_1091068

Ga0209940_10910682

F040630

PNYNIQISNKIKRQLFGILNFGHCDLPFDLAQGGGESFDFAQDREPVERLGICVLLFEILYY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026133: Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D1_MG (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences