Sample 3300026197

3300026197: Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_A_D1_MG (SPAdes)

Overview

Basic Information
IMG/M Taxon OID	3300026197 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114514 \| Gp0125924 \| Ga0209925
Sample Name	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_A_D1_MG (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	467270350
Sequencing Scaffolds	52
Novel Protein Genes	53
Associated Families	46

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	31
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA395	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1
All Organisms → Viruses → Predicted Viral	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Aurantimicrobium → Aurantimicrobium minutum	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → Viruses	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	1
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → wetland area → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	South San Francisco, USA
Coordinates	Lat. (^o)	37.4958	Long. (^o)	-122.1331	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002502	Metagenome / Metatranscriptome	553	Y
F003622	Metagenome / Metatranscriptome	476	Y
F005167	Metagenome / Metatranscriptome	410	Y
F005874	Metagenome	387	Y
F006304	Metagenome / Metatranscriptome	376	Y
F007072	Metagenome	358	Y
F007787	Metagenome	345	N
F012349	Metagenome / Metatranscriptome	281	Y
F013645	Metagenome / Metatranscriptome	269	Y
F014681	Metagenome / Metatranscriptome	261	Y
F015275	Metagenome / Metatranscriptome	256	Y
F022890	Metagenome / Metatranscriptome	212	Y
F027794	Metagenome / Metatranscriptome	193	Y
F029285	Metagenome / Metatranscriptome	189	Y
F031511	Metagenome / Metatranscriptome	182	Y
F032166	Metagenome	180	Y
F034100	Metagenome / Metatranscriptome	175	Y
F037938	Metagenome / Metatranscriptome	167	Y
F042291	Metagenome	158	Y
F045678	Metagenome / Metatranscriptome	152	Y
F050177	Metagenome	145	N
F050310	Metagenome	145	Y
F054750	Metagenome	139	Y
F054792	Metagenome	139	Y
F054934	Metagenome / Metatranscriptome	139	Y
F056035	Metagenome / Metatranscriptome	138	Y
F063375	Metagenome	129	N
F066493	Metagenome	126	Y
F066803	Metagenome / Metatranscriptome	126	Y
F068768	Metagenome / Metatranscriptome	124	Y
F073153	Metagenome	120	N
F073419	Metagenome / Metatranscriptome	120	Y
F078253	Metagenome	116	Y
F078533	Metagenome / Metatranscriptome	116	Y
F078535	Metagenome	116	Y
F083935	Metagenome	112	N
F084170	Metagenome	112	Y
F086685	Metagenome	110	N
F086799	Metagenome / Metatranscriptome	110	Y
F088532	Metagenome	109	Y
F089940	Metagenome	108	Y
F091493	Metagenome / Metatranscriptome	107	Y
F097996	Metagenome	104	N
F099972	Metagenome	103	Y
F100426	Metagenome	102	Y
F101210	Metagenome / Metatranscriptome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0209925_1001156	Not Available	13385	Open in IMG/M
Ga0209925_1001439	Not Available	11964	Open in IMG/M
Ga0209925_1001853	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	10521	Open in IMG/M
Ga0209925_1003165	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA395	7887	Open in IMG/M
Ga0209925_1005133	Not Available	6049	Open in IMG/M
Ga0209925_1010442	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4022	Open in IMG/M
Ga0209925_1012799	All Organisms → Viruses → Predicted Viral	3570	Open in IMG/M
Ga0209925_1022189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Aurantimicrobium → Aurantimicrobium minutum	2540	Open in IMG/M
Ga0209925_1024484	Not Available	2385	Open in IMG/M
Ga0209925_1026123	Not Available	2291	Open in IMG/M
Ga0209925_1029350	All Organisms → cellular organisms → Bacteria → Proteobacteria	2127	Open in IMG/M
Ga0209925_1029497	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2120	Open in IMG/M
Ga0209925_1033945	All Organisms → Viruses	1936	Open in IMG/M
Ga0209925_1038435	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
Ga0209925_1043998	Not Available	1637	Open in IMG/M
Ga0209925_1047359	Not Available	1559	Open in IMG/M
Ga0209925_1048686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1529	Open in IMG/M
Ga0209925_1049584	All Organisms → Viruses → Predicted Viral	1510	Open in IMG/M
Ga0209925_1057780	All Organisms → Viruses → Predicted Viral	1361	Open in IMG/M
Ga0209925_1061886	Not Available	1300	Open in IMG/M
Ga0209925_1064473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	1266	Open in IMG/M
Ga0209925_1067719	Not Available	1225	Open in IMG/M
Ga0209925_1074129	All Organisms → Viruses → Predicted Viral	1153	Open in IMG/M
Ga0209925_1078886	Not Available	1105	Open in IMG/M
Ga0209925_1082481	Not Available	1071	Open in IMG/M
Ga0209925_1100847	Not Available	934	Open in IMG/M
Ga0209925_1112098	Not Available	869	Open in IMG/M
Ga0209925_1125512	Not Available	804	Open in IMG/M
Ga0209925_1126199	Not Available	801	Open in IMG/M
Ga0209925_1128492	Not Available	791	Open in IMG/M
Ga0209925_1135694	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	762	Open in IMG/M
Ga0209925_1137091	Not Available	757	Open in IMG/M
Ga0209925_1138767	Not Available	751	Open in IMG/M
Ga0209925_1139381	Not Available	748	Open in IMG/M
Ga0209925_1142836	Not Available	736	Open in IMG/M
Ga0209925_1147887	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
Ga0209925_1154360	Not Available	698	Open in IMG/M
Ga0209925_1155417	Not Available	694	Open in IMG/M
Ga0209925_1158003	Not Available	687	Open in IMG/M
Ga0209925_1159502	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	682	Open in IMG/M
Ga0209925_1160966	Not Available	678	Open in IMG/M
Ga0209925_1171549	Not Available	649	Open in IMG/M
Ga0209925_1178181	Not Available	632	Open in IMG/M
Ga0209925_1185568	Not Available	615	Open in IMG/M
Ga0209925_1192312	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	600	Open in IMG/M
Ga0209925_1200072	Not Available	584	Open in IMG/M
Ga0209925_1200550	Not Available	583	Open in IMG/M
Ga0209925_1201028	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	582	Open in IMG/M
Ga0209925_1215437	Not Available	554	Open in IMG/M
Ga0209925_1218394	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	549	Open in IMG/M
Ga0209925_1242393	Not Available	511	Open in IMG/M
Ga0209925_1244717	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	508	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0209925_1001156	Ga0209925_100115611	F056035	MSLLYKPKEEQTTTCKIKQEGGKIVLDFYSDGGKFGTDEMLDGYKLTPERLLQILQDRDDYSEDEL
Ga0209925_1001439	Ga0209925_100143915	F012349	VPQTSKVHIEWRERFAYWPTQSSWSKKRIWLKKYWEGDIYYDAMGRPPIKYRSWKLIYTENEYLLMLLREGEK
Ga0209925_1001853	Ga0209925_100185310	F014681	MNFPTNFLRSLKRDCKGMVDLGVVLMIGIAFVGLMVVAYIVWTIDDQLDATGSAANSLSNITGGFDDAVNLLLIAVTITILAIAISALLMLRGRT
Ga0209925_1003165	Ga0209925_100316517	F086799	MKAKSIIYSRLISKGNYENAKIEIELEVEEGEKASDVYEAAKAFVEKRIAVEKMSDYTIERAKKVMDDKRNHTLAQIEEAEEILAKVKVNDDELPF
Ga0209925_1005133	Ga0209925_100513314	F091493	MYWFKRKYRQVQRVIDFLPMIWNGFDFDYRYSLDLFKKQLERQAKFLESGRAFTLSAKHNASRIRTAIRLMDKVYDEEYGMEYIEQIEKLYGKTHIDFVETDETDKPYYRLESKNELAVDEKHQE
Ga0209925_1010442	Ga0209925_10104424	F042291	MTVYQAYNGRIKAWVKYHFVKGGRAEILNVKQKEPKKPFKGIPKKGKKK
Ga0209925_1012799	Ga0209925_10127995	F007072	MTLKSDLDKSFNKKKGQLSIGDAPNVVLIIGLVFLTMATIAFISEKYGDALTENSTAANVTDDLETEIGDNTSIAGIVLTISLVGIVLTVLIGIFVGFRTRV
Ga0209925_1022189	Ga0209925_10221895	F031511	MGSKIPGGGGEVKLNSAGIRDLLRSEEIEAELRGRMQKVKAALPGSTIYTTTSRTRVAVKVLRGSDYDEANTGDLSRALDLAGGRRGTQVKTRKPTKGA
Ga0209925_1024484	Ga0209925_10244841	F083935	MALEVKGTFELETGMTLTEVYARTNASLSIEGNEVMAYPEFWVDKTAFDGRKDTLRIRIRENFSYAYDRAVDGADILAFANQKVKETLEGLGYTVTMVEV
Ga0209925_1026123	Ga0209925_10261236	F086685	MIDLTTIPLVVWVTGCIAFVILGHELTHYIAWLPVATSIEYHFEDQYIEAEYPDTPFARKWAVVAGISPVIVATGLVLALIATGWNPTATWHHITASAAVVLYGVSGGKSDFQALLNLGRTRRSPAADD
Ga0209925_1029350	Ga0209925_10293502	F088532	MPKIEMTQQELQALAGLLDAGVKAIGLRAVKDAAALLDKIEAASQPQEEADHGETDFDD
Ga0209925_1029497	Ga0209925_10294973	F068768	VTNLWANVEDLGEYANSDFAYDAVKTSSYILWALSGRKYTGTTTVTERYVSVYDPYLRVGGSSLHYWPTLIDGTVHNIASGGFDRFTDFDFLGDGTSSNSRLRLRGRKVIKIHTVREIDGTIIDPSNYYLADHSVLYGAPNSNWTPTNVEVTYTYGTPPPTAGKAAARLLAVELIKSYEGDDTC
Ga0209925_1033945	Ga0209925_10339452	F006304	MAKKPAAKKLTPSEKYRQLKKHTEDAGMSVTEKDGKIVVRRKSRKG
Ga0209925_1038435	Ga0209925_10384355	F078253	METKKVFRIENPTDRDGMWYTKEGLLRKKIHILCPDGIAKDFPMPLNLQLHRKDGHIWQSAGKNVENMNQWFTASDAINLYNNGFKLFEFETTMFQELEMEILFCRGGV
Ga0209925_1043998	Ga0209925_10439982	F050177	MARIPSDPPDDALTPRQLHDRVDDVVNLSVEELEAFRASEYNEEYLEYNSERAQQGNEPLDDVIRLLETPPDQWRDVDDGFNEIAEARELLDFQRRTQAQIESQGLGSNTIAEYDDMTFREAASIRWGIDPDDEREWL
Ga0209925_1047359	Ga0209925_10473595	F050310	MANMQSFIIGIVLVGVTLVIGIFISSEIADQMDTGSAEANAANDLVTALSGGSAWITILVVVGFAIIVISMLTTNLSQNREQSYAY
Ga0209925_1048686	Ga0209925_10486861	F078533	MTPQQFKEARRYLRLSQRDLADIWGMGKNGERSIRRWEQGDVPVNPIAAYCITLMVGSAAPHDKPA
Ga0209925_1049584	Ga0209925_10495841	F037938	NAIVKDRTSSNQEFNNKKCKQSKIEDKQRGLIRRFLNHNPWITEDFYTIRDTILGD
Ga0209925_1057780	Ga0209925_10577804	F005874	MAKIPSRPPDDMLSPEELYDRVEDTVNLSIDELFAFKRSEYNEEYNARKSDAAQAKDEPLDDVIRLLSTPPEAWKDEDDGFNEVQEAEELLDFQRRTQAQIASQGLGMNFLGDDQDMTMREAASIRWGIDPDDEREWL
Ga0209925_1061886	Ga0209925_10618862	F007787	MGKTKELAVMLKAESFEEMQFAQDFTKKEAKAKGQELAKTILDNGNANPLEVMATLSRLTEVINTFSETLKKDLNIPENETTLNGVHFKTRQGYPIYDFKQDVMINHYETLLKQRKDLIKQASKTGKPAVDPNNGEEIEGVPIKGYTKDSIVITF
Ga0209925_1064473	Ga0209925_10644731	F066803	HSTEQKQNIPIKKEPSYAWAKVWYEDDTVEPINTNQIITERKNFFKGWLCNIHESLHIHPNGRIQAASCGVGPILGNIVRGEFDTELTEGVWCPKNHCHCAADFNISKARPEYAKKIQ
Ga0209925_1067719	Ga0209925_10677192	F029285	MKNKADYSKYECPYSHLEKESGHELHGPEGYQDIYGVWCACGFRAPVFYLDPDELGLKLKNETDVATCT
Ga0209925_1074129	Ga0209925_10741292	F002502	MENTLTVGSQFTTAKSGVTGTIQEVVANKNGSSRVRLELANGDTRWTTVIKK
Ga0209925_1078886	Ga0209925_10788862	F015275	MGVVVSLIILAVGVFAFFVTLSEVSNVTDDENISSAVQNVSDTGNSVFNIIGIVLIIGAIMSIVGLVYNYVR
Ga0209925_1082481	Ga0209925_10824813	F032166	DVIRLLETPPEEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGSNTIAEYDDMTFREAASIRWGIDPDDEREWL
Ga0209925_1097510	Ga0209925_10975101	F054934	PAGHDEDWSDMLIINSITEEWYVKNLEIGKESKKYFTGYENSHGKIYYIPRGGCVCEPEETWKSQGDLAEILVIDTFDDSHYTIDISEYFIDNTTIEKYNNCIILNDIIYAFPYGESDSFQTVLIFDTIKEKVIKTIDLNEL
Ga0209925_1100847	Ga0209925_11008471	F007072	MLERRSITEYNKEKRKGQISLGDAPSVVMIVGFVFLIMATIAYVSEQYGDALTENGSAANITDDLESELSDNTSIAGIVLTISLVGIILSLLIGIFVASRRRGI
Ga0209925_1112098	Ga0209925_11120981	F050177	MARVPSDPPDDALTPQQLADRVDDVVNLTVEELEAFRDSEYNEEYLEYNSERAQAGNEPLDDVITLLETPPDEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGSNTIAEY
Ga0209925_1125512	Ga0209925_11255122	F089940	MKYIAAFLIVLGLAIVGGAEAHNWFPMFAAQIALGTVTLFSGILFAIEVDE
Ga0209925_1126199	Ga0209925_11261992	F099972	MPKATTGKRLLNLPQAAEYSAKSYERGLEEGRRQMQAEMLTALEALSAEAKEDIERKLNEKDN
Ga0209925_1128492	Ga0209925_11284922	F078535	MSNSLVKFTNQKDGNGRGKLFWGRADLDGLPFRGQTAPAFRQEEFDERVVRVADPKNGTFYTGDEKENAAYLKVMDGVANNWYHLLYIDRWREEGDKKHHIYVEWVEYYLEDGSPTQYTQTGSTGM
Ga0209925_1135694	Ga0209925_11356941	F054792	MAEQKISLKKLELGTIKLKIVGDSPYLPEPMDMAVLEKYNAIKSKKNYKKDDIGEEEKVKAKFYFTEDGKPGIPARAIYNSMIRGSSYLFDIKQGGMRNIKEGVTIKGDILPLKFKKHSEITHWGRTSGMKGSPRKIMRNQFEDWSVEVVIEYNKNNLSAEQIVNVINWAGFHIGVGGFRKEKTGNYGAFHVEFK
Ga0209925_1137091	Ga0209925_11370913	F101210	MGINVASGLEWGNRRPNEFIDQIVKTASVTTDFTLIDNVKSKVQVPIYDGQLQFGNDLCVFDPQSSADIDEKEMTVGTYKWDFL
Ga0209925_1138767	Ga0209925_11387671	F054750	QRYYKCNRQDGEELLLLLQKITSLLYYLETLRSEVHDAYEGKVFELVKDGNSVARSVNEANVTYPTMYQLRRIMDAGYRVTDAIRTNISYLKSERVNNHAT
Ga0209925_1139381	Ga0209925_11393813	F027794	MKLTVQNLQQMMQYLRNVAEADANDEIANAASSLAYRLESAGTSVFDMPMQFDEWTELDQAVARYAIDKRNVYVLQAGEKHAVDTRKETA
Ga0209925_1142836	Ga0209925_11428362	F073153	MSEQDMPIRKEIERIDGNIEGILTRLGQQGESVARLDLLVEEMKEMNQQLEHIEIRLNTLEGRID
Ga0209925_1147887	Ga0209925_11478871	F022890	MITRKLVNLMMKSSDYNPYTGKLSENDNVLAAIELAKKFKEFADEGYTDEAMDIKSSQWVEVINKLEENY
Ga0209925_1154360	Ga0209925_11543602	F097996	INRDGMHPRYLGWQVDWPIFVKVPFTADGKYWKKSEHFNWAERNLEMKDVASLYAQGFVYHNTELNKANKVGDRLSEMNAEDLRSVVTQLNAIVKDRTSSNQEFNNKKCKQSKIEDKQRGLIRRFLNHNPWITEDFYTIRDTILGD
Ga0209925_1155417	Ga0209925_11554172	F045678	SWFKDRFNNNFYHHKNLVPPELEEPTEYLIKDEYGKMKPGNRIILRSYNEYIASKYNLNALYGGINLNPDIEFEGRVKERDTGHIPPHYVHDSIDICHPFVYTKKDWIVKQYYKHNILDLFNITRSCEGEFNELNYKTYIPGQNVPVCKECFWCNEREWAIEQAIK
Ga0209925_1158003	Ga0209925_11580031	F063375	MTAVELSDRQVTTIETVGGHLQTVIAYGGVFMAGVIIGFESSDYPMMWPITQSYTGKAVTYPYTQMLEIGIGILAVCVMMIILLEWVVYLHER
Ga0209925_1159502	Ga0209925_11595022	F005167	MAVNTSRNMNQSLNEGATDGKYRKVRPNTEVAQGTGDEKTLDNRQSLHPFFGYGFLTTEYPDDIKVNPAK
Ga0209925_1160966	Ga0209925_11609663	F086685	MIDITTIPLVLWVLGCITFVILGHELTHYIAWLPVASSIEYHFEEQYIEAEYPDTPFARKWAVVAGISPVIVATGLLLALIATGWQPTATWHHITASVAVVLYGISGGKSDFDALFNLVRTLRSPAAD
Ga0209925_1171549	Ga0209925_11715491	F034100	MQLVKIEQQFEENPYLTVPIQENLLYDLPFKDFDKDGYEVPSPLEHLHYIENWVPLNREIQFHIAPVKPWYEDVEESEFGLVLDHCMLLSRWAFAGEARAKIEQAAKE
Ga0209925_1178181	Ga0209925_11781811	F007072	MKSLLNKKGQLSIGDAPNVVLIIGLVFLTMATIAFIGEKYGDALTEDSSAYNVTQDLQTEIGDNTSIAGIVLTISLVGIVLSVLIGVFVGFKNRGI
Ga0209925_1185568	Ga0209925_11855682	F100426	MARNRIIYASQSVWCNGEVLYRVQSFGSTTTFNSEDINEFGHLDIVDVVDDIPEVAVTLNTNDFGDVKTLATLAQLSPAKIAMDATADDTTGNLEVVDSSGVSTGTYLHGVSVADF
Ga0209925_1192312	Ga0209925_11923121	F012349	TITLTNVLLRLDFLEVLFQMPQKIELDIEWQEHYAWWPVRSTWSKKLIWLKKYWEGNIYYDAMGRPPIKERSWKLIYTENEYLLMLLREDANFQHPLSNS
Ga0209925_1200072	Ga0209925_12000721	F097996	MAITTAGMHPRYLGFQVDWPVFVKMPFSADGKHWKKSEHFNWAERGIETKNAATLYAQGFIYHNTELAKANKVGDRLGEMSKDDLYSLVVQLNNIVKKQTTTTKEFNNKKCKQSKIEDKQRGLIRRFLNHNPWITEEYYEIRDHILGD
Ga0209925_1200550	Ga0209925_12005501	F066493	MSESREFDDGLIDVADELVKEHSADGAIDRLQRRRESTRSDELADRCLEAIAYIRREVQDDT
Ga0209925_1201028	Ga0209925_12010281	F013645	MNPAFLFGTAFNIAYWHKKYHSGTICKGVSNPHASNALSGCEKEENPK
Ga0209925_1215437	Ga0209925_12154371	F050177	MARVPSDPPDDALTPQQLAERVDQVTNLTVEELEAFRESEYNEEYLAANSERAQRGNEPLDDVIRLLDTPRDEWRDVDDGFNEIAEARELLDFQRRTQAQIKSQGLGTNTIAEYDDMTFREAASIRWGIDPDDEREWL
Ga0209925_1218394	Ga0209925_12183942	F073419	MTQAYFEATPQQKQLAAIGREMMDYSENYGVEQGLKAVTDNGLRTLNNLSHVGSMLTHFGAGFGTTIKDFTEADLELITLFMQKKVDIERK
Ga0209925_1242393	Ga0209925_12423931	F084170	MNRWTDDMIREYFDTHWNATIHEICALSGRTKAEVKRALMQGAG
Ga0209925_1244717	Ga0209925_12447171	F003622	NELEEIANDLLTQNAEPKGNENKPNYTNRQFMNAVIIFQTALMDKMYDNQDYDKMDIKNRYKMAESCGSDLRKLIHTYTGLDTHKFEDFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026197: Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_A_D1_MG (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences