Sample 3300028905

Basic Information
IMG/M Taxon OID	3300028905 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0127429 \| Gp0193736 \| Ga0169749
Sample Name	Human fecal microbial communities from infant at 12 months in Denmark - 53_12M
Sequencing Status	Permanent Draft
Sequencing Center	Beijing Genomics Institute (BGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	86527099
Sequencing Scaffolds	2
Novel Protein Genes	22
Associated Families	22

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1

Ecosystem Assignment (GOLD)
Name	Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated → Human Host-Associated Microbial Communities From Fecal Samples Of Mother And Infant In Denmark

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Location Information
Location	Denmark
Coordinates	Lat. (^o)	55.678	Long. (^o)	12.531	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F042095	Metagenome	159	N
F050794	Metagenome	145	N
F057001	Metagenome	137	Y
F058555	Metagenome	135	N
F064725	Metagenome	128	N
F067844	Metagenome	125	N
F075481	Metagenome	119	N
F076653	Metagenome	118	N
F077313	Metagenome	117	N
F078005	Metagenome	117	N
F078006	Metagenome	117	N
F080673	Metagenome	115	N
F083451	Metagenome	113	N
F083452	Metagenome	113	N
F085718	Metagenome	111	N
F089590	Metagenome	109	N
F089591	Metagenome	109	N
F089592	Metagenome	109	N
F093883	Metagenome	106	N
F101356	Metagenome	102	N
F102167	Metagenome	102	N
F106193	Metagenome	100	N

Scaffold	Taxonomy	Length	IMG/M Link
Ga0169749_100061	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	141988	Open in IMG/M
Ga0169749_100678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	22987	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0169749_100061	Ga0169749_100061112	F058555	METKIALLQKMKSNFDKILTEAYIPKDIQARKDELGCLRLPAGSLVCPVDYKPVTNKDGKKVTAVKYSNKKDNIRGSGMVIEKKCKQVTAYLSIINVQKHVFLRNRMRDGYRDRIEINTDDFIDILSDGIAYFCYRHVIENCHEDIDYQLKTLKAYAEGEIRIALSDIMIYSYKAKKNEDTKEIFVGNKRSVYKCLDKNLSSDERRNMANKSRKLDRVRILSKIIFRARTRNVHHIYKVTKRKTIKFNVAYLLNELNKKLAGIGMHEISQSTIYRYISMFLGMCKKSISDLYDEVKKNNGIANAKDRKNVTIGHLRLSYRGTIMHIIISEDFIKDVFLGVKGSEMSKAG
Ga0169749_100061	Ga0169749_100061117	F093883	MEEDKDIKKEIRDYLKEEADTHIRHWIAIKRESKRLYSDIEDRTKKIALKSSSLIKEEDFVVLHEMTHKIQMLNIEAVKVNSRLMFIIQLATSFGMDLDLDTTYASTAKSIIEDRTSGFVFYDDKERLRYADKELEDMFHDMSVTEVSKIGVVQSYELLMKQYNEFKDMKANATGKTKAD
Ga0169749_100061	Ga0169749_100061123	F089592	MKEILKSKKVLVEVNGFNIMSDTLYEVVGKHDESAPQAFQDANIAKAPFPENATHVCCPWDDFSEVYNTGFYPRSRCYNGMDKDEVDKLVDQRVNNIMKPFENISQKDLSQTNFEFWDDAKDKIYMGKVYNTANTVELFYLYLAVFSGMLTPQEMDGDPIFMNSMFCFIEKDNAKDFVQQREINKMNISYKFIDALKKGGKERQAVIDLLLYIGIVTRPDFTEDDYYTGSLSNWMNEKKTNIDYLLDIWDRSLEGDFKEVLEFYRIVNVLQRNGRINMTPSGLQYNGQIIGPDVRTSAEFLATKKDLISVKANVLDEYEELMSISNIDDKTKTKKVKDVKKKEDVEEGDKVDKEE
Ga0169749_100061	Ga0169749_100061124	F089591	MTIQEAYLRSLQKNEQNLSNGGIKLDPGRFVLLFNEAQDRLIRYYLNRKDDETIRSIQTLLVYWKSLNEVNHIDDPESTSFSLPDDYLWFSNIKGAFSYNGCEVGDFVMWEAKNENVHELLGDDNNRPSFDYRETFYTIGDGKAVVYEDGFRTEEVRMTYYRNPVRVDLAGYINAAGERSTDIDPELPDPLVEEILDMVAKQFNLNENELSRYRMDKDNVASFK
Ga0169749_100061	Ga0169749_100061131	F042095	MAKTLYKYEASSNKFVWFTTWDRALRNYYTDDYNYVPDPVVGNPYNTFVEFKSRKPGIANVDWGDGIKEQFPMTKVQGEDNYRIIFRSLAIQHKKNPNTTWWFRKEDGSQYVPVDNHAYADGRRDVQRAVSIDFTCDIYYANIQICKMTSFPIVDMPELKFLIVSHTVYINDGIPVDRLSRSKKLIYIDLQNIGKRMTVIPEAITSKTEVYYLNMFNMLDLRDIESSGIRNIKNMKNLQTLELASCYLDRYIKEFNDLPKLNSLRIHPGPSDMWNYFDINTLPFFEVDKINPNITNFDFLNDWVSGERRTGWNDDNMSGRGLDHLAGFIVYHSNSIRVDKLPDYIYEMRAITLFNMNASTHSQKRSDDFVDSFYKLVTEWDQITMTSVANDGKRNQFYGLSVSMYIATYPTENQRPSGTEQAPEGFVKGSSNGSPATPMEKIYVLKNNYAQRWTIKPE
Ga0169749_100061	Ga0169749_100061133	F089590	MKDKDMIERVGALWNIALAYGASCWAYFQPVHHLLTVLLIVLIANFLARLAQSVRGWKLRRSRRRRFSFKRWLREVRLTDILKEFALSCFIVMTLCVIYKTLYPIEEEASMILTVTKYGVYIALVGYVMLFLNTIGDTFADAYLVKVFKAVFKRINVFKMFSFSKNIPDETFDDIKKIADDEVKDKS
Ga0169749_100061	Ga0169749_100061134	F075481	MMRLRISLRAIFCLGLSLSLSSCGSRRQVSETSIDSRLISRIETMINEVIDLRMVEIKTSDLNADIIITERKFDTDKDVDPATGERPVSSQTDTHIVIGRRDSTVTADSLGIDKTRNDIKNMDNKIDIKSKDVDDKDESKWPTAIIFISILGILVVLFVLLKRLGLIK
Ga0169749_100061	Ga0169749_100061138	F106193	MGCNTCKEKALRAERERIERSMMNHSSSTAVSDMEYASRSTAGCMVMQDPLQVMERDVVSIYRQVRTKGDGVGVSYLNMQKKIREWIKNLPYGCPPDEEVQEMRKEILDGRSKHIKP
Ga0169749_100061	Ga0169749_100061158	F064725	MTIKGLLAEIKADLHKYDDSGAIDTSSVYRWAEIALKRFGGVIAVMSEAVVKTSNKQAVLPSDFFDMLDAYRCEPLICEIPGGDKAKADLQHEIGWVERTERGFRWNSCTECCKEEFEKTITERIYIGSHEVRFHYHHPVRLSIGRGLRRDCAADKYRDKYDWDNYDITISGNTMYTGFDGFVYIIYRATPKDDDGLPYIPETALGYLEDYVETYIKMKIFENAAVNGLIQGAGDAYKLYAQQEPGKFARAMKELKMSMITLNDYRELAEDNRRRMLSYERMWPNAFDKYIKLV
Ga0169749_100061	Ga0169749_100061168	F077313	MSKYVIKRKIPKYQEAGEVGSYMLGNMDGIQGLGIEPLVNTNQGLLASVNPLGIYSLDTPDQDNVFPASFKGSLQRIAENYQDNGIMLNNITVNDVDKSKTGSGETDVFDFTTIPYYGADDIGSRFTQMGRGIGRMRSKGYGNLSTGAKTANTITTIASGISGIMGLARSVVSGIASEKGTRTNIRLAQEREARQRRQSQMQYKDGGGVYLGPNNRVDSGSLTCEYLYPLPKSMEDQANVEVEKGEYVTQPGEEPMEAMGQKHADGGTPVSLEQGTKVITDDTTIEPDFAKYIRDTYGIKATPKDTYATLMDRYKAKIGLKSAYDDQKKALEKLKKNDKIDDENTRRLNASVLSKAINDSNDTVNGLEGRFTDFANVIYKEQEDRKMKKDEDTYFAKGGEIDNIISRSMKEYGLTEEDIAEAKKELLKKVAGIRQKMEIGGTSLFGRKLTFRPIENRFNNDPNYFGYQRQGTDGSYGGINTDERLNYYKTFNPVAYDAYMGASEGARARALQDAIYGQTSSWMGLATAENPIIANAEALRDYTTLVSFGGEDSQGNYPEDKKAAYHDRMRDNKLGLFTTSRPMIGLDVVTEEQHKALNDAGITHFSQLFSDKNKDVVNKILGEDMLKMQALRSMKGMEGLDFILDPHKVAPGPMDIGDVEEPDVKLDMPELIDPNTLPKTNTNAGKSNSGNGGRNIVGGGLDFPEVFRMTTGAVTTEGLERHYAPTVDPVLRSADQYMVETNRAFQSQLDQMGNVPDSQRGALSSNLQAIMSSNIGRYINEVEQGNVVQRAWADNVNARTWADTYDKNIAQRQAYQQRILQGLAMNDENWARYFDSVNDEIQQKWNTATTMNTLRSIFGDVKIGPNGQLIADPQGDILIYRKLYPAQEVTKGKKG
Ga0169749_100061	Ga0169749_100061171	F050794	MAPVGTLYIMQLDSFLHRKIMQDLRIQRVKVLMMLYTSNYFVKVRQKQLLDHTYSLSRDQAFDYMTEFNKRLSDKVGIKCTMDILLPTDDDNANIIIEHNGIIKKLMKEAEKLELDTDAIEAMMRDLLDELKDDINLNILIFDVSQLLIKYNLFRLDAITEQEFKNSFVRMDSRNMEIKKLTLSDIKKVVEMIEDRYSYALYMTEEYG
Ga0169749_100061	Ga0169749_10006127	F076653	MTIRDKYFGWKDIFFDRFVHCCNEKSDQPQGSNIPLAKINFDNKTGYVEDGTINIAELLQYLWINNKVYGCEYAPIDISSVLQTLIRLTENAKFIFDDQPCIHDMIPYRGFFLRDDFLPGKDYSLDLDKIVSGMGGWYGEDEDPCYSMFVSQDQIWNLNPILKVLADEGSILAKELGYDMNSYVSDNGYTIYNPYLSWINHYYHYCPTFNEDKLKPWDRVEDRKNKFKMTDKVKRGANNWYYSGGTISCVDNFLGKEYRKNLRTFIYRGIVFFLDRIWHTPLFEKMGVKMKYNAYYCYAATSGIWYDKGFKERLAKRFNKSLGGDGELFGANLACMVCDCKDIDWEALRLWLDKYDDPTDKGMVNSPIQFMYLYLYYTFNK
Ga0169749_100061	Ga0169749_10006138	F083451	MEEKDVLNLLMSRKDIRKLVEKSNECYSKMDFVGAMKYRKQIKDVIDHESRIMLTRSESLIELMNGSGDEYKFKMLVWLHSMMCMADVFNGILEDFKDGVGKANGNSKFIKFDNLDRLMTECKKEIDYLMKGTSKSFQISFAVRSDEMREMIENMVGDNIREGDDMFKEEAKMTKETDRSKIEEFNKKLDHDQM
Ga0169749_100061	Ga0169749_10006158	F078005	MKKSEFVKELEKIIDMVKIEDDGFEYGGKVIFYKEDDDNYEITVKNIEMDLMVEAGAMTSMDDRAFDCLMSEVYKQKFTKDITMSEDEDDEDN
Ga0169749_100061	Ga0169749_10006173	F085718	MVIEFDFEIYKNGDYDKVYLRNGKEPRVLCDNGKGDRPIVVMVEDDNANDYIVLRYNETGRRNINGKSSLDLMLSVKEREPELWVVVISYIDNKDKRQKMVLPNFFSRNIGGNIYIQGSSKSNVSYYVGRLEEDGCFDELCEKIRVKRDRIYNMEIISLSDDKATV
Ga0169749_100061	Ga0169749_10006175	F078006	MLNQALAGRKEYHDRTCADMVRGRFPAPWHNLNINDMGDNILRKAAEELKKAGCRVFAWQDDTYNRGWSKGDYMMLYYAFPDSPNIGYLSHGEYGMSVAYSRAYIPSCGSGSGCRVKEEATFDLEAALDVLNGPLPRWCRSYGVYPKQYDNIDKWYNSDNYNKKLFKEI
Ga0169749_100061	Ga0169749_10006179	F080673	MDEIVKLQDEALLYLRDNITREEAYYILTTDKEMIEILISDKKDGSKRIKILDAEYTIEKDDMLFLFDTDGVIDECLLVASYIGVNMYFRRQDIRDILSKKLEVMEYRYIKIQVDNIPVVEKRRVILDLTGHRLDRNDRDKIDFMFIYYMARLCE
Ga0169749_100061	Ga0169749_10006185	F057001	MISKEINKVQNEVKKSNEKTLTGAVKAWCNLFKSGKEINDILKENDIKVSKEVVPALVALAKDKEVVIQLCKEILPRVNNTFCAYKEVEREYYDKNEHDKNKKLKMSEIEDIAILGSSHKRFGYNEPIEYDFGIYYETFNGADKRIIKCAVPIKRYTFNLIAKCVTYYLTHPKNER
Ga0169749_100061	Ga0169749_10006192	F083452	MSGRIKIKSKDKDKRPKIDVFKVIENRFKNMNELRDLIDMDPRKGLVRIRDGAGFREVERGGCLHRNYLNLLEEELGAKLSIDLIDKYVKRK
Ga0169749_100061	Ga0169749_10006196	F102167	MDINQIKKYLPAGWDVVDLIDHGIIDLDIMNGKMMGEYVAMLMIRSCEKATKSYTLTSFSFHDKDMDKLRMLIGNAIMAVGYRNNPLTGDGNTAIK
Ga0169749_100678	Ga0169749_10067816	F067844	MNTLAAETASAWYLILNRKLQTLPIYKAQLSSPLPRPLTMGTQQVSAGAAVITPQHRSYRVPQGSPQVFGGP
Ga0169749_101823	Ga0169749_1018231	F101356	DVGELMPVVTPEKDGLSNSKFATTKIKSEGKRSVLLYRSSSSQWAPFAIRVSCISTGEPSSDFCVYIAGNTMELQDSTKVYVKYLYGQPNSDTYLKMKYESDHRISIYLTSDNSLGDRTIVRELIVRDSMYDMATQDDEITGLADCTIVQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300028905: Human fecal microbial communities from infant at 12 months in Denmark - 53_12M

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences