Sample 3300029362

3300029362: Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 053_3_13_stool_1

Overview

Basic Information
IMG/M Taxon OID	3300029362 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0133117 \| Gp0283013 \| Ga0243852
Sample Name	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 053_3_13_stool_1
Sequencing Status	Permanent Draft
Sequencing Center	Institute for Genome Sciences, University of Maryland School of Medicine
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	281854120
Sequencing Scaffolds	30
Novel Protein Genes	45
Associated Families	45

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	16
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ct1h53	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus bromii	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillibacter → Oscillibacter valericigenes	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Feces Microbial Communities From Cholera Patients In Hospital, Baltimore, Maryland, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Feces → Human Feces Microbial Communities From Cholera Patients In Hospital, Baltimore, Maryland, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Location Information
Location	USA: Baltimore
Coordinates	Lat. (^o)	39.28846264	Long. (^o)	-76.62594594	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F029589	Metagenome / Metatranscriptome	188	Y
F032286	Metagenome / Metatranscriptome	180	Y
F039147	Metagenome	164	N
F041208	Metagenome	160	N
F042910	Metagenome	157	N
F043413	Metagenome	156	N
F043945	Metagenome	155	N
F044554	Metagenome	154	N
F045105	Metagenome	153	N
F047126	Metagenome	150	N
F050793	Metagenome	145	N
F051934	Metagenome	143	N
F051935	Metagenome	143	N
F055739	Metagenome	138	N
F056623	Metagenome	137	N
F057385	Metagenome	136	N
F058154	Metagenome	135	N
F059106	Metagenome	134	N
F059982	Metagenome	133	N
F062845	Metagenome	130	N
F067844	Metagenome	125	N
F068855	Metagenome	124	N
F068856	Metagenome	124	N
F071325	Metagenome	122	N
F073573	Metagenome	120	N
F074898	Metagenome	119	N
F074964	Metagenome	119	N
F075480	Metagenome	119	N
F076064	Metagenome	118	N
F077319	Metagenome	117	N
F077320	Metagenome	117	N
F078003	Metagenome	117	N
F078693	Metagenome	116	N
F082714	Metagenome	113	N
F087213	Metagenome	110	N
F088914	Metagenome	109	N
F089005	Metagenome	109	N
F090484	Metagenome	108	N
F091068	Metagenome	108	N
F095494	Metagenome	105	N
F096287	Metagenome	105	N
F098313	Metagenome	104	N
F099406	Metagenome	103	N
F101193	Metagenome	102	N
F102166	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0243852_1000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	289309	Open in IMG/M
Ga0243852_1000004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	199891	Open in IMG/M
Ga0243852_1000006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	182105	Open in IMG/M
Ga0243852_1000014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	149275	Open in IMG/M
Ga0243852_1000019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	135171	Open in IMG/M
Ga0243852_1000022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	131435	Open in IMG/M
Ga0243852_1000034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	115517	Open in IMG/M
Ga0243852_1000036	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ct1h53	113466	Open in IMG/M
Ga0243852_1000066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	91480	Open in IMG/M
Ga0243852_1000067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	91107	Open in IMG/M
Ga0243852_1000084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	84678	Open in IMG/M
Ga0243852_1000180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	62866	Open in IMG/M
Ga0243852_1000201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	59086	Open in IMG/M
Ga0243852_1000203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	58743	Open in IMG/M
Ga0243852_1000247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	53553	Open in IMG/M
Ga0243852_1000394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	43924	Open in IMG/M
Ga0243852_1001620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	19774	Open in IMG/M
Ga0243852_1002658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	14315	Open in IMG/M
Ga0243852_1002801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus bromii	13788	Open in IMG/M
Ga0243852_1003040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	12981	Open in IMG/M
Ga0243852_1003312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	12271	Open in IMG/M
Ga0243852_1006691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Gemmiger → Gemmiger formicilis	7366	Open in IMG/M
Ga0243852_1010869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	4875	Open in IMG/M
Ga0243852_1014524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	3704	Open in IMG/M
Ga0243852_1021185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2549	Open in IMG/M
Ga0243852_1041636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1249	Open in IMG/M
Ga0243852_1047297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Oscillibacter → Oscillibacter valericigenes	1085	Open in IMG/M
Ga0243852_1057025	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
Ga0243852_1061639	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes	810	Open in IMG/M
Ga0243852_1062148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea	803	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0243852_1000001	Ga0243852_100000118	F095494	VSDPKEKEVQAILQAIDYGHLPPRETQRRLLNIIQAEAARTDAPTDETKIHTCMDLLERLQGEQKPIAPARVDALRQHIAAAHQKNERKRQKRKKIMAAAACSAAAIAVAFAVSHPLLWYANWTTSDEQQHFVTSHEIAIEMLETAVADPMLPSGDTVEVQSIAALDALIGRKTGIPETVNGQWELQHRYVNFTRSGISISLMYVNAADAQQTIVGVINLISNPQYMMLSFEQSYEGTIQQFDGLNFYITENINKPVALWQGDDKLLLFSGRTSQEEVTSLLRTIIREIGE
Ga0243852_1000001	Ga0243852_100000176	F096287	MQRIQKRRAGQRQTQNALIGLLSAVSMTRIGLTQLLPLCGSAAWWLSAACMLPGLCVYGALRLLLRHTHTRTLTDCARKLLGNFGGILIMLTLTLPLLLDGIASLTALITFFTEGIGARGSQFTLTLLTAAVMLIALNRDGLPRGVYLLRHVLLVAAAIIAINALLDAHPDGIVPLLGEGVPPLLSGIRSAWGMSWMLLLLLEFPAEEGTRRTPVMFVALLPCPVILLLLSLAIPPELTVPGRSLASRLALPTLFLQPAVRTLAQCLLMMTLFLSIAGSAQLAARFLTSSCQKPKKWVPYALIGLLTLTQLFDISRLWRVLTAFTAWSLAPGVLLLLVLTIARLCRREKA
Ga0243852_1000004	Ga0243852_1000004169	F101193	MARKCTEYHYFKHTYWDAMARYNWTRCPHCGKLCKPSRFKAATVLVPIEFVIFVVYIFFRNSMNDAIGWFAAWLLFVLLLFLPHYIYVRFFMPYETLSEDETRKFRDLQEH
Ga0243852_1000004	Ga0243852_1000004175	F041208	MRKILAMLLSVMLLLTAAVAETSAPYAPETVLPLVANNRPYRDFARGAISSSEDAIEQAKAWLYLPLFVTNFSAKSEAVDWSAMRAEEGWYVTAYMRNTFVWLLMDEQGRVQAYDFDLLGNASLTYDGALPDNLDEVISSYIRRFADLNGFVEVADYAREEVTTFGDYAVAVTVQVTLDSTPYRFTMRLDMMAFTSVENANLHPTAAQTQRDILLLMRDNLAEKGVDITQTFFAVQTDDADGETKLTGIASFPADAASDAIREQYGELERYTLHYSGCASEAGIERVELSDWQETTATAQFPLALYALVDGKYLVPDGELAAGTAYLALDSMGLRGRNVIPLESITMLTRIRYARADGTFAESWVSSDTLTENDAAPAAPKREPIPTLESYQITLSGTAYTAFAINKVEKGYDAFADIAGTQTAVVDVLTSAAQGVIAEYGVDASDLLCRTVVEYGYRADKGCWQVDFTIPQRDMADDAYEVEVDDKDGKVTGMWGPQDGNG
Ga0243852_1000004	Ga0243852_100000452	F077320	MKRKGMHRRRKLVLLAVLLIMVGIAVWRIWQTPRPVVLHRQDAWLSSAEPEMVDVLPDNAFTAELPEEIDGRLLYIRDYSASGHYQIVWEGVSAEAAESYLTALLDKGFTRLMGTAEDIASGVLLARGDLTLSISLSGGMLNMLMTRAEEPTPTPLPEWFADW
Ga0243852_1000006	Ga0243852_100000639	F045105	MSDKLKRVLDTNLAGLHVTDAQVNAVLRRVSQDEQRPRVIRWQAIAAVLLVLVLGAGVLLQTGILSDDSPQLTADVTRHGDFLTAAQVKKLLASAADLQFSVDEEAISALMTQVEKDGGCSLSTLLEILCPAGSSLGQWDIRAQVALSQTLERIGYQGILPGMTREPLSTEITAQDALARAVAYIRTNDDPQADFTNLDFYRVGIRFLSGVYDGTCEGAYYCANFDALDAFGTTYEVAVNAEDGSICRMRRERGAGSNHTADEVTRGFRRIFGYDMRAWTPLQLRVYILALSRADRSSMQTVHELFLSVGRDGFPDVPVEALTREEAIDAALAIQGGSSSDVLAAEYLAGASGDFWKIAIRQPNAPSGQSIVYLELNGLTGTLLTTTYSGNLYGLPQEFFPSQLLSTLDRTDFSHGVPAVDAETAQSAASDAIERQYQRNMAEEGYTCFIESDFEDTAGGFSYYTGGGVVIFTKDAQNTSQGDIYWAALNWYGEVLDVGWNRNPLDAARFTLLMQGYLPPIYQRETVQQLQALLTGSLTDEAGLRQMETDGTLPLFNALLALEVVPDASTKSTADDVTAAALKSLNAHLCYENSSFLVYREDGELIWHFWLSTDMGYFLMDVRDSDLSVVGSVQIPSFSALRTSILLPVRVWNTLAENLRVTIFYRDANTQPSIVYGMYANHIVQRYVDLYGANILRWDQATLRSFQSAISISGSYVGDWSVACLCQTIYPDVPDYAISQEVAAEYAARALGDDDYSLRGGVLIDPGEGDPIWKVTLDYPDGRSFNAEVDCRTGAIRTLRQQDTRAMPFYTDYLDFPDDGEYWFRNFVLDEVIEQVRTQMTGRYGNNV
Ga0243852_1000006	Ga0243852_10000069	F056623	MKSTEEMLQAAVQQLQTAEQARLTSETDLARRQLLHLLYAREAAALQSMTLIRAEIPAAQKRDWKPLILPFAAAVLNLGALALWLTLPNCVTPENSGWMGRFALCIVAQSVSLCAAIGSIVSAMRRKPPKPVVVADETEFRRRLVEAEGRIALDAQTIEALFAQESVTIISTGAETAAELYASLYEMAQDARLDGDANQEKALSWPLSNAKRLLNAVGCEAVDYAPETAMFYDVMDADITQQRRPAIVQKADGIVQQRGLYLRKG
Ga0243852_1000014	Ga0243852_100001419	F051934	MGLMRRLAAAALAAVLVLSTALGERVTFRLSADIDPVQYPAQERKLAQGLKSLFRLLTVEGDVVASDGSFDARIDLGLTNAPEKTATRIRFFGLDSHWGIQSTTLGGETLMVNQLAWLEFAIKAYNHLDLPLQRVFLWLSPYAHTSAWAGVRQAIADLAAQETSGRLENTALITCAEEIARLSEDDRALYYYIEAFGLESGADANIFDALATLPEYVEANFPDGLSIEHTENGVSWQNGEETVFSHAEADGTQVVSLHLPDLVDFSATLRRDALLFTGALSLQSDVLNAQVSFSLPVSYPVTLPFYAQIDADGMMTGDDGIHLAFEGEAQGDTITIRRIQPDHSATMMTLTVKVIQVAEGTVKYAPEDVQGTNVLSVDGPALAELMGRIGKPMVRKVTQWLAALPAELVQGAMDAMEDSGLLGTLTDAVLNGEAGEY
Ga0243852_1000014	Ga0243852_100001458	F077319	MQENAVCAANCTVQEKRGGQKIMLIRNATLQMSATERACMDVRVMNGCVWEMGAALVKGLYEAETDLRGDVLMPGRILETPIPAADEKALRLLCRKLYREGVRYFVADCPADALLRVQNRPERRGALPVTALPNPEPLRSGTGMPLTRWTAAGEFISMMDEHSGD
Ga0243852_1000019	Ga0243852_1000019102	F051935	MKRLLGLLLAMMVMMGGISCAVAENTNPIVSDWLTELKSKRLIQIVEDEIGEGWTLYQPNGREEEENFSSAENLKEMRFLPVVAQKGNQLRLLILRKQGDLWKVSEQNDRALMRDGWTLQNFSAMPYGNSDWTYIYFDFVDENQKRWNLMLNLGDGYVSSFGTISHYVEGYGTTYINMNYDRGLEFLIDAPAYSRLSYEVYPVEDYSFGVEDFDLATCPLSMQEFLVSAIVTCGEEGAGLYIMVQQDVQPIVTLADGDAIEAIPQKWELDWTIVYYQGNYLFMKTENCKMEE
Ga0243852_1000019	Ga0243852_1000019114	F039147	MRARRLLILLMMLLLLPRAQAERLTLYTRPGQVDEATPFQLRPTELSICSVTRAMGGVVVLANDDNYDSLSLYFWQDGMTEMRKLGGGFYWVMSSDTMETAQESCEYAMSRVPNYRMPDLTHAISELTSDGETLYALNRINGLIFKISETKDGLQTEDVCTMANLSCLNVSYRDLETDKVYTYPASLTRMHVCGSVLAISVMQENGIKVVLVDLADGAIREIADESLEAMYEWADGELLLWRLEGSPNEISRSSGTYTLSRYSVATGEETLLSTGVPYKKRSECGAYDPYSGSYYDVRTRQIVRTTDFVQEEPVVTFPAANVNIAVTKDSIVGVNLSSVYVRSKENGDMTVLRIQSSNGASNTALQHFAEENPKVILAQETLTKSAMNAASLAARMSASADAPDILRLGLTPDTPEADGSWPLDVLMDKGWCMDLSVYPEVSDYVSRLNGIYRDAVTRDGKIYALPIYAWSYGYFISRNVMEKLGLQESDIPTNLIDLCAFITKWNDNLTGAYAAYTPLEETESYRERVFDLMVRDWIGYCQAENIPLRFDHPVFREMMAALDAMRTDKIEQANQQVNEEISDYRECLIWTDAQAVGNFANYADAFGSRIFLPMALTPDVTTHYGIGYMTVLVVNPRTMNADLVGKMLAQVIADQEATAKCVLLADYDEPIEDSYYLIMVNDYEKTLTELRRQQENAPVWKKQGIQERINEEEASLQRYTVRERWTIAPKTIELYQQTILPMSYLRRPGILADSDAFSALVSQVHQGEISLEEFVEKADKLIEGLEQ
Ga0243852_1000019	Ga0243852_100001929	F059982	MRRMTRLLCLMLLFSLITFSCPLAEETTAPTGTPAPTPMLTAVPESALAPFNVVLPEDAHVEMAEGRITLVRGDSRVVAMVISRVPDEDPAAALPVLMQDFDPKTSETMDFDAQPGFCILGGVVNDAFGDGEDKITLMVLADSGELLILSGYNLARDHHALYLFLTELLENVSMDGAAVYVAEDAAATASPEA
Ga0243852_1000022	Ga0243852_100002242	F058154	MKNRTFQRLFPLLRMGSILLAAVLFCAALIGVNAQLTVGTNEERNLATYLGLALTAVVTYLLQDVPKMLVGRHFGWKLVRYEAFGRVYQADGAGAFVRIQAPAQSRLRYQPYLLPPEDAPRHDVTLYTLCPLLYGGALAVVFGVLTLLTLGQPVSLVLCELAMGGVVLVMTCILPMDERFIASPMAIARMLRDPEQLAEWLYFARMKANGGVEVTDVSIENIPQPATVKTCQDAICVFQRAQIALMVQCDAQKAYGLMKQVLESEARLSYTAWKLLLSDGVVAELLAGEPGEFTALYRGKAGAAIRQVMFRMVDYALPAYAVATLVTHEAREAEVVRNTLAPVREKMPELDALMKAIEEKAARIES
Ga0243852_1000034	Ga0243852_1000034108	F082714	MVVGIRFAADAPVRTVLQAVLPIFSTADVDFLVREYWVCTFGNGLPERRFTAQEMRRALDALTPDEHAELFTIYVLPHNAPGTPPSSCEDFCARGFTMAFYAYDGDGYALLAQSGEQVEAAFEALTTAGLCEKVEEVEKETLAHWGF
Ga0243852_1000034	Ga0243852_100003457	F043945	MKHNLRMAFLSLLLVLTLGVMPVFAESTDHAMDWTHGIGSRYRTDVTSALPFEDELFFISGSQLLRVDDPEYEPEVVCNLEDIIWSEALKQSGYYGQVMLLDGGAELVLFSANEGRLYSFVPPTDDTMVRMQMVAELDYSTVPQMGWKKFPIAKDLYDVTVEQAVYDAENGLYVIAKDKTDEYQIVRFDVDTGKGEMLEFALEDDENSHLLTDMPGIFQWSGTSSKYERTLYDGKVLTTVDLSSGEATKAVHNWVNTLTLQPIQDYDVTLGDYVTHDAYYAYAPNKDNTAMYFVHDNTVWVMEYDEENSQFSEPRGIDKLPFFAEDTMCGFYWRGFYLIQTHDGLYLCHTGDETARAYLYGGVE
Ga0243852_1000034	Ga0243852_100003460	F091068	MNEKNQQVSDEQIDALIRSGLWQDEQPLTADEEKLADAAFARAMAKIDRKAKRQKRRTVLHMLDRVVRVAACLIVAVGIAFPIALANSEAFREQILQLVLSINPETGMAHVGMQPAKEEQTANVPRMDVPDGWEGLFFPTFLPDSLPLVRCETTRGDQVHSEAYYADETRSLRFEEQDNLDGWNVRAADARVLTIYLHSVPGYLIDRQTEDTHEVSIIWAEGKRMLRVTSIGLPADEAVLVAQSVKKIFAE
Ga0243852_1000036	Ga0243852_1000036122	F099406	MAEIGYNSKFEGQEVDSRLENVVQAAPGTGSESGKGGLIPAPPAGSQDGSKTLLSNMTWGDHVTKQYIDDAVSAAGWKKQIVSKLPTVEEAKDNVMYLVKDDVASTETKNVYNEYILVTEEGGTKVLESLGMVSTGVDSGYLDLSIFPGNSGSLNENSFAKVLDAYNNKITLGKLGNNYYSLDYFLDSRDFEGNFELRIILVSFADTNSAEGTSESDIEIQVGTFIVTQDKAYKVMNNMVTLSNTILSYLKFMAMPPKVVTTLANLPRGAHNIIANVSSATNLSMAVSSDDVGREWQVRVNNTTGTDITQPLPTSGLFQSMSGDSVVVPKNSFIELSIWYINDKLVIRVGEQA
Ga0243852_1000036	Ga0243852_100003685	F098313	MKEKEFDFVIYPLKLIITIGLDYKTLCDRFENAELDHEGEWGDEGDLDSEVSFMNLVRDKGDDRAFKLLWNFQSENDMTIQNICHESFHAAMSVCQHCNMSLGFKVGEDEHAAYIAGFVGNCAGEMFGFLEEEKNGKED
Ga0243852_1000066	Ga0243852_100006626	F068856	MKRLMSMMLALLMLVGMALAEEKSDPILGDWYALNTENEAICLTLREDGTFCYDSREGTWRKTTDGEYWLTYNIHDLPEVMERMVNSQAAEQDLTALLTETGLDVYYGSTAKGVVAHMVRDAEELQNVRTPKTDTPLEAFAGTWTMETVFAGAMEMTYTLDKGERLAFCTIDGLTMLPGAALGNFTEGTSYPMTLEDGKLHTTILMQMTEEETLDFDLTFFQTADGSLYATLRLNDVPDNPETMFLLVPMEKE
Ga0243852_1000066	Ga0243852_100006632	F102166	MKKLFSLLLVLALALVPTLSLADDDAACQDLYNMLLDELKSVDLEMTADEESYRIYLGYALDKNSLGDADVIFDAYSDAVTINVSYSNPLDEALVPQVISFFNRVNSTLYVGKLMVIKSDNVWYAAYEIFLSVDPENITDWDRNNVLAYTALALDTMEEMVDYITEIANGESADNVFAMWQADIGAV
Ga0243852_1000066	Ga0243852_100006665	F055739	MTEQQLREKLQFAYGNMPDATRAAFEHSLTHHRAPETHRNIGLNRTMRIVITAVLMALMLTAVGVAAARFFSVTDVHPAQDGTEGDYQAHYLALEEQYDSDLLSVSVNDAVYDGSVLAFTMEMAAKTDDVLAVEVRICGECDGKMYRFDPLDVYGGEFQSLLMLPDLGGTFDGEKYAAEGILLDENGQMPPEGKPIAWTIEIDVLKAVWQTETMPDDLYEALSEEDDVAQYIHEQAEQRIITLTDAGVEDYLLEMCGAGWNEIEQISKADLLLRCGGFERAETYTVAFATEGNTQYVHPELSGLRIPLDGYAAVVDYVRASFLGGCVVLHCEAPNGTALPNGTALPDVWRIYRNDEQNPAGEAGWARASGYAGVPGGVVDVNQPSICLYFAPCADLTSLRIVPEGEAGFTLNLSGEKGTE
Ga0243852_1000066	Ga0243852_100006667	F043413	MTERELREKLQSAYGTMPDATHAAFEHSLTHHRVETRHPVRMSRRMRTIVTLALMLMMLTAVGVAAAKLASVTDYPPPSGLTPEYMSHLVALNEAYDGDLLTLSVNDLVFDGTTVEVAMNVQPKAGKQVFMDMEVTAECAGRAYTLEIEGCGGGDFMSGMFLPDGTGSWSDSPFGFDGVLWDDDMQSPPEGAPIAWTMTFELLQPVWGVEYLPDAQYQALLSGGADALEAYVQNNWRKHIITVTYGSLVEYQYAAEAAMLADGTITEPLSGSRTEQLLSCGGFRRADTIIVQFTTDFADDYAHPELVGKRIGMGDYDLVIDNVNLSFMRANITMHYEFSAAYTEDEIRQMTNLPNAWRVYVNGETDSGYDAYANFQQVTNGAYGVDTPEQLTVGFDFYPAETDITRLTFVPIRNMGERWDACHPDAEKGFTLELQE
Ga0243852_1000067	Ga0243852_100006758	F087213	MKKFSSVLLAVLLIFSCWTVATAESTDAVSGAPLDNDIEIVYKEHFDDMVTHYADELTEAELLVSADVYDAIGMIRFDSEDSLAARQRIYGIASADDLHAILTGYFDPNDAAYTADTALDARLQAILAACGLNPEDYDISVIRNLSGMPEPITGTNWYCTLIRKGIEVAEDETNPYDMVIVLYGDEMTVGAFVLNPEV
Ga0243852_1000067	Ga0243852_100006770	F075480	MNKTKQEKWQRAYGDTPDSFRQRVASALPKGEESRHVAFPRRAMVLAAALVLVLTTAYAAVVTHTELVWNAGHPIENEADDHLGLLTGKAGTSGDSLTIGGVTFTVQDGVYSPETGQLFASAVISADESVQLVGVESDMEWEVRAVTPVSEKLDPSGISWAEWAEQNGKTLVPVRMEIRGSEQFPNIPMFCDFLTQNPDGTVSAGFQVDLTEADTSHLKSCEVQLECRVGVFGKDGKATQWQKEILIATITFK
Ga0243852_1000084	Ga0243852_10000845	F057385	MKKLLAVLLSIMMLAMPLTSMAENSVWDNAARQETTITIHDLNADLVAALGGDDTTMAAINDLLAALSLTGYQQGDEAGFDLNLSGKSVLGMASLTTAAEENQLMYVSSALLGGVIAVNSKDVEAIKEKALRATMKMSGQSDEEIDKAIEESKEQLSGNAEYTALMEASANLSSMTEEQLMEELTQADTTAFMTMMNEILSGAEMAEVTEQPGDCDAAKNYVKVTVPPEKLAEMTKALLEMIHSVPSIGAYMDAFFSAADTSWDDLLKELDEADLYADDIVYEYWTAEAGELVRMTASVKINNGGEEPLPISFTMTRNTADGVATWLVTIKSAEDTAATLTFAGDLENFTANLTAYAGEDPVEINVSGKGVGTDSSVVDVEIKETVDGVEQGFGVVVTTFATMDGEQGVRKVDVLVRFMGLDVVTITAETRTCDAKDALDVSKAQDLGAMTDSEFQTWFVKVMNNLQNLPMTLLMSLPESMLTLLMGGSN
Ga0243852_1000180	Ga0243852_100018046	F078003	VNEHLAFAQCLQRVLNETELTATEVARRLEMRSRNSIFRILKGKTSPQLNCRFLESFHKHMGEQLTEAQWAALNRALEMDAVGAVEYKSRQALMQLVGAFSEPISPAKVCYLDALGAEKEDSFLHYLQVLFCGALKVNALLFGCCDLGLFRQLQEAIHPVAQRVIVRIDHFIYAGEDEIVSNLVGIQPMVDQPCYHAYLVDAENCPQERLAHYRTGQMTFHVMHQDGSESTVALFLLGKNEFTATVMSTQDLWMSRKVLCDRERFSPIRLLWQLNDENSDFIVYTQQYCKMEHGAAIYYIRPDVPFQYIPLEVLYPVVREGFARMGMTREAYEPNVTALAEIHQARMTNMMRRRRPTYIVLNKAAMEEFVRTGRQSDHLHFLRNFTPKERKQILDVLVQQARENPFFHLYFAQEKLPYTMGEVALYDGRALITMSSGSGYDLRTDHRESCITHPFVLRAYKQFYMNTVVARLADTQTESLNQLEELVRRCEKMIREGQKGNAGNEQEKISGQ
Ga0243852_1000201	Ga0243852_100020142	F042910	LADRLYCALNGTTLRDLDARIHLLDVEELAPAVRTVTASRIGGGLHLLRRQREQLSLRVRFLIEEYDIAARHQLLHLVAAWAEAGGVLTLHEDGKRVLRVVCTQYPTMSTLNWLETLSLVFTAFSCPYWEDAAETSFLMPNTSDAPSKLLAVPGDAPETPLNLLIRNIGDTAITTLTISAAGKISFQGLTLAPGAAIRIHHNAGVFAAEMVSDDSTVSILPYRTPDSADDLLLRPGVLNEIRVEAGSAAFVSGRCKGRYC
Ga0243852_1000203	Ga0243852_100020316	F050793	MRKCEVDVPENVEMADIHAIQTRIKKHNLLTTALLIPLFAGCALRESNETLGGIVFVLSIALMVLGFISGRDDEKRLPAYWAKYQQIHRMDNLLRANLVGVWLCAEARVAVYREGSDYRVQLGVLDEKTGAWENDEQDKVFPTLADVREYAAQEGYEPMDVDFGQMTDEEFQQFLDRSRI
Ga0243852_1000247	Ga0243852_100024714	F074898	MRKILSLLLILALFLPCALAETPQGIDLALTSTYGDGLSLRMMAGLGETPFCSLTLPSGQIDLAFSPDKGLCVQSGGQWAQLLVEGRPVDAALLTTPLKLLDGRSPSEVLGLLAEDVNKMLDAIPSLYNLPMTLIRDPAFARLFSDLYIAAQTGTISITSEELNRMAASVLGKIYSMEYLDGLNFSDIYHNLLASVVQSSEVARAYRSAMRGYLLSNFRLSGQIGIDKGELLFSQPYQEPYHLTYEQTTPNSWHYLLTTANSDTIDGVLYWRNEYDFALSGYSENQHTAFSVTCSYGSANNFVFIASVDNSFSLSIVQTGSNFSLRLDNENANVFALNANVFSLESTSDYIRVKIYYNYYTLTITPATDGLDIVAQAGTFDIFTAHVRTALNGLICTGVYGDTTYRLALTETATGFSLLLSLPDGDFHLDFAALSDTSCSLTFTDAAGQQVSLTGSLCTPESPVIPEAIGTIELTQLLDVLFYSTSHKSGHPFTAGV
Ga0243852_1000394	Ga0243852_100039413	F088914	VGRILPVCSGFFVFWSRKEGANYQISVKSFSNLDSYDIIQLYIMTELTDGRVSDRLFSVPYTPKENIKNPGKFIVFSAWYAAKALEVDVK
Ga0243852_1001620	Ga0243852_100162030	F090484	PDEKKDMNRMDIPKNPSDFFLLQIMKLQLGRNINISLRLLEQWSDDSLFMELYALYCMIKISRRDSRIRFKNKKDLLHKLGIGYSKFKNMTGHPMFDELFRMTNSTFVARRYRVNGVQLTLGCGKVNIPKNRILIKIKKNEITNHEKVLDRIREAMFVNLVRNNESVLNSGETNSQADVVDGSHSYYGLIDSTISNKTIALYLNVGLTKAKEIVGMAIQDKLVKRFENIQFITYVDNPRAYIEANEHNYPIGKLIPVYRHGAVFWQIANTWTLYKKGATNRWYFGEKDIEKGEKEKVSKKDDFNFFLKDNTHILRFLNAEEVVSEDGEILGIDRKKTKEEEARSLASVMAKEAHKDFWDGYERSTQNQIIRKYYRAIIAEDKKRRMDMFLNRLKQSYDKVSGWSKEKVATVKAGMADAEACCAEVGTSVAGVCGRVSRRMKSYNNTAPDKKAGFNEVRDMYAEFAGEMAKAVGSVSEDIYMYVKAEQFKEKIENMDISVQSLPNINTTVDNDKELDGESVFKDIPLEELSFYNDTYLYPSSQYSSL
Ga0243852_1001620	Ga0243852_10016204	F074964	MITKKNVNKLQNAVIKENAANLVGAVKLYNALFSNGSDLKSICKALEIPAEYAVKVAALAKDKKRLVAVCSQMLPKVDDTFVKFALYSKVYKDTNADKEKGVEAKTADWCAENVVYGSEYKSFGFTTAESLETKKSTKWLIKENDEYKATYVAVKIKSYSIRTIAKCVSEYLAHESNQQ
Ga0243852_1002658	Ga0243852_100265812	F073573	MPTIVSFYQRFPNEAPPLNLSAFDHTGYTYAENFRRNERCYEAEQCEVTSDDGSVVLSLDVHIRPRGGEIEALPRVMLSVYSEGMLFQVRRMELRTGDTTYAILPDNVQQYTKRGETDGGFLETMAIPLGKVGMKMLLEASDAAEARWVIQGARTAQTLPLTAAQKKAIHRFCMDCEESAITYQPAFLWYKDYCTKA
Ga0243852_1002801	Ga0243852_100280116	F089005	LTKSKQRSIIALALLRLATSNEESKQALKVRRTLKIEQRENSKETRNDFEESSKNYSEMYTKKHQELRI
Ga0243852_1003040	Ga0243852_100304010	F071325	VLLALLSDSSIIISKVVLFVKHFFDIFLSFPNAFLKAFLPHAVRFPAAFLLVHRFYLVFEELLSCATAYL
Ga0243852_1003312	Ga0243852_10033125	F047126	VYLKTKKMTNISQTQAGFKSKSLGILCGFQGFLTQNPAALVETDDIFDVSDTPYGFSELNTLRAAGVPNPPPPFAQRFIACFCSQTAAASQSKSAYILSSLESPCILCSLLRCFHILSKKLQKTC
Ga0243852_1006691	Ga0243852_10066914	F044554	VLAGRFIPALCASIARLFPCRTEIARCLTLDFAISRYLFLSFSFSFRTNFAQALFSSLLFVSDTRAKSILFLLFENEIAHLQGQYRFNSHRYCFSAFLVL
Ga0243852_1010869	Ga0243852_10108694	F078693	MDLAPVRGAERFFIKANCSLLMSKENQKTTSDFDALDPRERGCSPLSDPKEEVEAQKC
Ga0243852_1014524	Ga0243852_10145241	F029589	YNACAGSSRPQAFFEEAELNDPADYVRQKHGRDFKKFRKEVLANGQIVFSYDNGSVTYRYEFAEL
Ga0243852_1021185	Ga0243852_10211853	F062845	EKGDSMKKTPFILHEKFRSDNNEQRKERFQKEFERYIIDGLLNAVPSRSCA
Ga0243852_1041636	Ga0243852_10416364	F032286	MVKWVCQIVTPVRHRALVFDARLSAGNTANYTLVMGNTRSFCRLMCLCVKWRNVKPDSKHRSLPDSALFRADNRTEQKTISPFSLALIFTFDFAALSERRSCPEDRFRRFVLLGALDAALRQRTYPVRTVMQFSRFRCDCKTILAKNIA
Ga0243852_1047297	Ga0243852_10472971	F068855	MVPTISRCPSSSVPTVEAQGPQVRKSLAPQGLQAEKERENANVQNAGWLHSFDADYHYRGSNLHYHVNVSAALSEGGATW
Ga0243852_1057025	Ga0243852_10570252	F067844	MNTLAAETASAWYLILNRKLQTLPIYKTQLSSHLPRPLTMGTQQVSAGAAVITPQHRSYRVPQ
Ga0243852_1061639	Ga0243852_10616391	F076064	TLHAVRFAVGTNGEEGFRHHISEELKKTIPGRALDNLFYLQYDLPPEASFHATTEEAKRPDELYIRKLLPELTRLKLQPCHVVANDEAYYAAMKGISLFTPEAEKLMHRADYYSARRQIRLCAPDLKRRNEAKRPPKPALKFY
Ga0243852_1062148	Ga0243852_10621481	F059106	WKIRVILLQKFVWIVDLKVREHLTEYLKKDIKYHRVIIGVFV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300029362: Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 053_3_13_stool_1

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences