Sample 3300030662

3300030662: Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 10_T1E_StrKB8 developmental time series (Eukaryote Community Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300030662 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128996 \| Gp0213227 \| Ga0187735
Sample Name	Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 10_T1E_StrKB8 developmental time series (Eukaryote Community Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	63560572
Sequencing Scaffolds	28
Novel Protein Genes	37
Associated Families	27

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	11
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2592	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Babesiidae → Babesia → Babesia microti	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	2
Not Available	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	2
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Metatranscriptome Of Upside-down Jellyfish Cassiopea Xamachana Infected With Symbiotic Dinoflagellate Symbiodinium From Hawaii, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: Pennsylvania
Coordinates	Lat. (^o)	40.7982	Long. (^o)	-77.8599	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000023	Metagenome / Metatranscriptome	5736	Y
F000076	Metatranscriptome	2620	Y
F000085	Metagenome / Metatranscriptome	2467	Y
F000241	Metagenome / Metatranscriptome	1481	Y
F001154	Metatranscriptome	763	Y
F001300	Metagenome / Metatranscriptome	727	Y
F001767	Metagenome / Metatranscriptome	638	Y
F002609	Metagenome / Metatranscriptome	543	Y
F003025	Metagenome / Metatranscriptome	512	Y
F003866	Metagenome / Metatranscriptome	464	Y
F004604	Metagenome / Metatranscriptome	431	Y
F004725	Metagenome / Metatranscriptome	426	Y
F016665	Metatranscriptome	245	Y
F018723	Metagenome / Metatranscriptome	233	Y
F023533	Metagenome / Metatranscriptome	209	Y
F026799	Metagenome / Metatranscriptome	196	Y
F034936	Metagenome / Metatranscriptome	173	Y
F043414	Metagenome / Metatranscriptome	156	Y
F047094	Metatranscriptome	150	Y
F057101	Metagenome / Metatranscriptome	136	Y
F058692	Metagenome / Metatranscriptome	134	N
F060930	Metatranscriptome	132	Y
F062433	Metatranscriptome	130	Y
F070138	Metatranscriptome	123	Y
F074387	Metagenome / Metatranscriptome	119	N
F074901	Metatranscriptome	119	N
F076116	Metatranscriptome	118	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0187735_106448	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	714	Open in IMG/M
Ga0187735_106653	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456	506	Open in IMG/M
Ga0187735_107359	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1639	Open in IMG/M
Ga0187735_109698	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2592	802	Open in IMG/M
Ga0187735_114192	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	580	Open in IMG/M
Ga0187735_114667	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2592	1109	Open in IMG/M
Ga0187735_116574	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	581	Open in IMG/M
Ga0187735_116797	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Piroplasmida → Babesiidae → Babesia → Babesia microti	509	Open in IMG/M
Ga0187735_117452	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	505	Open in IMG/M
Ga0187735_132444	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	502	Open in IMG/M
Ga0187735_132921	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	991	Open in IMG/M
Ga0187735_139686	Not Available	687	Open in IMG/M
Ga0187735_139817	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	659	Open in IMG/M
Ga0187735_142576	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	509	Open in IMG/M
Ga0187735_148352	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium natans	536	Open in IMG/M
Ga0187735_150086	Not Available	708	Open in IMG/M
Ga0187735_158836	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	541	Open in IMG/M
Ga0187735_165143	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	638	Open in IMG/M
Ga0187735_169951	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	891	Open in IMG/M
Ga0187735_170950	All Organisms → cellular organisms → Eukaryota → Sar	1465	Open in IMG/M
Ga0187735_174933	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	887	Open in IMG/M
Ga0187735_179469	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	893	Open in IMG/M
Ga0187735_179719	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	560	Open in IMG/M
Ga0187735_180576	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	889	Open in IMG/M
Ga0187735_183905	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	874	Open in IMG/M
Ga0187735_185396	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	573	Open in IMG/M
Ga0187735_186349	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	837	Open in IMG/M
Ga0187735_189813	Not Available	579	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0187735_101447	Ga0187735_1014471	F000241	AAASGPGATVEFKKRPFGILRYQPGEGMKGAMAMEIIPKSRYPGDPQGQAFAAGIQSGWVVQSINGMNVQNEDFGKIMDMLDDEVADPRFSKSTALALEKQGGRMAEPVEAPLSVVFSSIPGYVYKGAQLTEDGQDGFAR
Ga0187735_106448	Ga0187735_1064481	F004725	YLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSSDKMLSVQKNNENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFFTQVLMVIGYCAALACFPDFWWTCTLCFGIPFAYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLF
Ga0187735_106653	Ga0187735_1066531	F026799	GTEDLLAMGATGSCCSCEDDLQGSDDSRRPGRQTRKRSPTEFTIVIDRRTGDSLGIDAAPEKVGTLEIKSVTPGGLVDRWNQAQPPGSREVVKPGMRVVEVNGRFNSAVGIIAACREAEVLHMSLEP
Ga0187735_107359	Ga0187735_1073591	F001767	MATSAPLLGKPGKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSNDKMLSVQKNAENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFFSQVLMVIGYCAALACFPDYWWTCTLCFGIPFSYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWVPRRVKHNAFVLCLWALVWLLGTYPLGRPLSEGWRFMFTVSFFARVGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMKQGK
Ga0187735_109698	Ga0187735_1096981	F074901	EELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSNDKMLSVQKNDENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFCTQVLMVIGYCAALATFPDYWWTCTLCFGLPFSYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWSSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRVKH
Ga0187735_111243	Ga0187735_1112431	F000023	KKLSHVNRGAAATKPVDGAGGAAGLDTMAEDLDQLKYDVGELKDLLGNNKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCFNEVAVVRSDLERNVADTEARLKN
Ga0187735_114192	Ga0187735_1141921	F004604	GLAAGAHAGLAVAWRCRSQRQAAAKESAPTKYVETVADERLFEQVYLQYTSEYLKGPLYWHPDKLQGWLPDYPGTPMIKEGKYTSHVIGNLKAFSSNELAFLSMLFFGVGLYGNLQFNFYDPQWAKVDAGGFFNVSYIVESFLLPISFFMHIACYIQRQNGK
Ga0187735_114667	Ga0187735_1146671	F043414	GPNADGWGGQFMADVSTGLKIMRLHPDVFHVDFMTMEQVTEKRLSRNHLTFNFWGDMSIALMNEKPKLAKRLQKIQMNPNFRHHPVWDYYEWILHKSRYMKACERAGIPMIDTIHLEKGFNARDVLKKIVAKGWDKFFVKPAYMSFFGAGVINGKTQDFIDNIEPLLQYEKENKHQKEFLVQPYMLKPNGEVFDEIRNFFCDGRWAYSVYTDGVDYEGFWEQPEGQLKEACKNLAIRTMEEVEKVHKWEGKRINSLLNRIDIGIIPDKSRKHFGYRIFVNEIEPQMTTWLGRYCPFVIQDRMAEVCVKQAHEMLKRSLAARRKMPSPQKVRQLLDVLEQRLKES
Ga0187735_116574	Ga0187735_1165741	F034936	AGTRSVRLEPSFPQRPKSPRRCLMAMAKSNSEAGADFVKNSKVGSASGFMVVAGSILAIPHKTGTKMKIQTAPRFNGASEYNDSFKEIPHCYASMDKKPLIPYSANATRSRLAVEDAPVPLKNASTIAFQDRFCVHNRRFVTTHKNYYTGEMPDMRSNPGMIADSTKLKRMLQEK
Ga0187735_116797	Ga0187735_1167971	F076116	QRVDCLDKKDLEDVQQVYQAALDIFENHWILYVMDTILWEGHRQKNVMDAMEHQRRRIDFHQHYYFRPTFILAWCHEELGDCMIAQFPARKWHITQEFQRAYQMLAVLCGSTHQYTASPYNKLWQVTNGNSTNSSNTNGTADAVAESAKLA
Ga0187735_117452	Ga0187735_1174521	F001154	QAPGLRVPRSPEKATSPGMVKVTVGKAEDPWCEIELTEEDVEDWKKGVDITEEKLKEVIQLPPITLDNCHEREDGDLQWDEITFEEEVNGKYWHAVIMALHRIREDFVKKQRKMKHLDWYMTMKKTSDKRNAKYYV
Ga0187735_132444	Ga0187735_1324441	F004725	GSAGITCLRKFGFAEVGMATSAPLLGEKKQAHSKASIFYGADEYLEELKKKYAHDHEIAAMKNLLPGEGDPNAAGVAESKDKMLKVEKNNENRSLKTNRLFPTPNKPDPMPHNLAFLFTKITPEQMMYMWNVLTFIFVTQCTMIVAYCAALAMFPEMWWTCTLCFGI
Ga0187735_132921	Ga0187735_1329211	F000023	AKLQELEARLAALEGAAGGDDGVLPSRKTGGDAQIMKKVATRLQDFESQITAQLANLQTDFDKKLSHVNRGAAATKPVDGAGGAAGLDTMAEDLDQLKYDVGELKDLLGNNKGEVNHIRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDIINLKNEMNTKLDTKVDNVAWKEANDDLDAAIKTVRDMVSSLRLDVDARRRKVDEILATIRHDITAVETNLEESKAKITSDTDQAVNALNGRIDFTNKDLAATQESLHTTQNSLSDCF
Ga0187735_135263	Ga0187735_1352631	F070138	MTAAEAKFYRDGYTHRTVLYDSMQDAKAEYGGALNFSAYRQGRDRQYLGVNGKNYYAKPWGNDSSNIQAVINGPSYWKRVYYRENIAARFAREDAEAAERKAQAEIAEALSNGAGEAPPRRSQSESALQKPKTLDAKDTYAPIKENMKPFVEKQGKPRIRAMEAGERLHFFNTLHNKYHMKAGGKNLEWNVSKQTHRSTKNELNWILSNYFRTDSHAVLKGAGHD
Ga0187735_139686	Ga0187735_1396861	F060930	KNAQMATNQKSPGSITSVHPSWKPFGPGFGIHVFRNVIATAGLRMFCSPCRTAIEKATGNSNSMTTLAGDFAGNVCAACLSAPVHQLYGYTVTTPELRTLPAAEQRERMVSFLKNQYLDTSNGRTRLSGLVPRDLFMRSMYVAVAYTMYSTVERTLVANWPQ
Ga0187735_139817	Ga0187735_1398171	F003025	WWMHFPDEGAGGKCNKEFWSKWIPRRIKHNAFVLGLWACVWLLGTYPLGRPLSEGWRFMLTVSVFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNIMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187735_142576	Ga0187735_1425761	F001300	TQGINVLNLAISGLMLLTFMTIHLFQFRFGDTDQFGPYYIRPPPYLINFWGISSLNLFWTSDASVEKVGVRDIYALEFQIFKNPLWSFFYIFSVCIFMYHACIGWKKVTPVLGIPRGHIWRVELIGYGIMIVMGLVYISFPLYVMATKPFAGYETKIQIPGRIE
Ga0187735_148352	Ga0187735_1483521	F001300	TQGINVLNLAISGLMLLTFMTIHLFQFRFGDTDQFGPYYIRPPPYLINFWGISSLNLFWTSDASVEKVGVRDIYALEFQIFKNPLWSFFYIFSVFIFMYHACIGWKKVTPVLGIPRGHIWRVELIGYGIMIVMGLVYISFPLYVMATKPFGGYEMSIQIPGREE
Ga0187735_150086	Ga0187735_1500861	F016665	MKRSPTFLVGTVQQKDILGEFQKREQHYTEEYSKNKPLCFSARAFQQPHPAKVRMGYKDADATLTSPMLLGVCDGVSQLEEFQMDPSLLPNELLRTCEELAMLQLMPDTNIAPQDQYRGPISLLKEAYQETTSYGSTTVLLAALDNSTRIHGKLHPMIAVLSIGDCELLMLRRTNGRQSELEAVFHTEMQRIDYNVQTPLQLARVDERIDEEFDES
Ga0187735_158836	Ga0187735_1588361	F062433	RQAVESGTRPETLPGPDRPKLVPKPPFCWQPSQEYEKEFQVTGEYNEIVTKVGDFEDQGWVIPVGGSWRLMRGGLYHWTIRIERKCTSRPQLQLGIHGANHNQPWRLVTTSRCSWSRDDEPWQDRAGGDRLIEEGSYIHLEVDMRGVNSKHGTFAMAINDEPFEQLFDDIPLSQPYSLIP
Ga0187735_159017	Ga0187735_1590171	F057101	DPDIRELGDYFNIEERWVVRLNEAMKKRQDSKAVDIEKLYEVLEKARSPTGLLTVQIGKMECGQFVGKVKPDKDVERIARKFKLDDHVSSKITELKVWRKRNGEEERAMKDLERIEYHLRFAKRPNALCTLLVGKLLEGEVDELPDLTNAEKIMTDFKLDEDACSKMREIIEKRSADEERVLTCVRKQLKSASNASSMLCKIARTLIDGGDLPDPPERPPKGKGGGKDGGKEDGERGERRDRDGGDRHHDRDRRRDRSR
Ga0187735_159885	Ga0187735_1598851	F023533	ATGPMATYVPTSDPWDNAATDTKMIPTIPSSPQCTVRGQTVFEIRKMRADAKQIGMAIMYEIQTMEKRKAYIEQMTTYLNDRIRELNKVKHDLAAEQKWIDVSNQRIAELAQKEKLIKLQDVMECIKDEQDRLNNERGTKAFTVDSLEKQAQALKANIEGIRNSMNARLADKPLNNTAIPQIP
Ga0187735_164926	Ga0187735_1649261	F047094	FDSRTSQMTPWDSDWAGGTEGSDIRIAKEYSLDVRKINHAKEVASEVFPLERAVTPFSEYKLRLGIAIMIEPGIEPKTADAVRQWVNKGGKLKVGGDVLVGLKRWETLVPKTPEVDKLLHNMPEELEAALAQKSKLIGPGDLPADLTPAQRHTALGYQAKGLEFVKAQAKGTDLTPLLIAPTVLHSAPKSLKPGSNFQILMDKLDGELPKKEEIQFVGFGLAPGVASGPQSLARELVLSPSNCDCEANTF
Ga0187735_165143	Ga0187735_1651431	F004725	LEFSPTPFASMATSAPLLGGKGKAAHSKASIFYGADEYLEELKKKYEHDHEIAALKNALPGEGDPNAAGVAQSSDKMLSVQKNNENRSLKTNRLFPTPNKPDPMPQNLAFLFTKITPEQMIYMWNVLTAIFCTQVLMVIGYCAALATFPDYWWTCTLCFGIPFSYIAIQNIYIDHDVMHGATFPVYEWQRFLTHPFADFVSLPWEEFVLEHN
Ga0187735_169951	Ga0187735_1699511	F002609	LIQGEFGWDPEEFHYALQQWAGPWGSNWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWVPRRIKHNAFVLALWTCVWMLGTYPLGRPLSEGWRFMFTVSFFARVGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187735_170169	Ga0187735_1701691	F000076	AQAAERGSSSQPSLAPPFPCWCAMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0187735_170950	Ga0187735_1709501	F001767	DQNRSLKTGRLFPTPNKPDPMPLELAFLFTKITPEQMIYMWNVLTFIFCLQCLMIITYCAALATFPESFWTCTLCFAVPFAYICIQQIYIDHDVMHGVTFPVYEFQKFITHPFSDFISLPWEEFVLEHARHHASTVDLLIQGEFGWDPEEFHYALQQWAGPMGPNWYKYLLTVPWIPVIHFFGLNDTGFLFALEWWMSFPEADASGKCNKEFWTKWMPRRVKHNAVVLGLWACVWLLGTWPLGRPLSQGWRFVLPVTCAARVGFSLAWMFITNFTHSLPWNKFLENDPARTWPKLHNIMALAVGGKHRWNEMLFHDVHHAFPNAMGTLSQRGRFHGWKKVHDACVEVLARGLWKPNGDEETEMMKSQKKRSAVMKQGMAS
Ga0187735_173470	Ga0187735_1734701	F004604	GLAAAGLAVGAHAGLAVAFRARAARQAETKPAEKSKYVETVADERLFEQVYLQYTSEYLKGPLYWHPDKLQGWLPDYPGTPMIKEGKYTSHVIGNLKAFSSNELAFLSMLFFGVGLYGNLQFNFYDPQWAKVDAGGFFNVSYIVESFLLPISFFMHIACYIQRQNGK
Ga0187735_174933	Ga0187735_1749331	F002609	IQQIYIDHDVMHGATFPVYEFQKFLTHPFADFFSLPWEEFVLEHNRHHASTVDLLIQGEFGWDPEEFHYALQQWAGPWSSNWYKYILTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWVPRRVKHNSFVLFLWALVWLLGTYPLGRPLSEGWRFVFTVSFFARVGFSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMALVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSLMMKQGK
Ga0187735_176345	Ga0187735_1763451	F000085	AEEVAETFAMVRALALAALAALARAQNWPACQEQNTVIRNAGKALFTNLQGYGAVIGCFLDDCMSSDKFVANEIESCAKVCFSLPECTHWVWGTEEGEQKCWFRTGDDGREAGEGWISGSKSCYPPGTTVLPLGNSECWAEGFGYENCCEAKFGPNGNAQCWDGVYNYDRCCFPKEEL
Ga0187735_179469	Ga0187735_1794691	F074387	PKTARRTGSGLPEAAARDMTDRFYPVGMEADAENWKTTYEVMNEMRSFARSPYPPGTAIHQPGSRDHFGYSAPGPIASRLTNSELALTEDTDIPNPREHMAITRIQEPDDRRVFERHDVDEMLRTYNSPVAKATLSPSKPQSLAKTFSLPTIARRSEAPPKLSERNPVIKKLEDAHFSYFVPKNMQREHKDRLNTAQLSKLKKANMISFPFTGEGTGFRSQGSGANWWPSGSYAQVPTSYRVQFGRPGFFRDNSPLMQSKFPQQAVSAAQEDLQ
Ga0187735_179719	Ga0187735_1797191	F001154	FGSSRLSPRFPAAATPSLRGAMVKVTVGKAEDPWCEIDLTEEDVEDWKKGVDIAEEKLKEVIQLPPVTLDNCHEREDGDLQWDEITFEEEVNGKYWHAVIMSLHRIREDFVKKQRKMKHLDWYMTMKKTSDKRNAKYYV
Ga0187735_180576	Ga0187735_1805761	F058692	RMDPESMSSFGFGKRKRLNVVSILINVLTPWLVFCGVFASMSFSTHHESPVLAWLAVLAGLAFAGGAGVMARRTKMQDQDPTWYTFAALALGLATVSAAVLGDMNYWYNMQPYYDIENINTYPSVNPAREKGQQLMDAGRVYFEDGTGLDTSKAMAFRNLDRYCVAPIVFGQEPLASYDFWAVGVNCCSGTTADFRCGEFDNPKARSGLRLMREDQRPFFRLAVQQAEAAYNIKANHPLFFYWMQDPVAEVLKYRSDGFKYALIAISTFFAFNILCVAGSVFAFSKLSHEF
Ga0187735_183905	Ga0187735_1839051	F003025	NWYKYLLTVPFIPVIHFFGLNDTGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRVKHNAFVLSLWACVWLLGTYPLGRPLSEGWRFMFTVSVFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMQQGK
Ga0187735_185396	Ga0187735_1853961	F018723	MTAEKTGDGKGQPAAKKGGKEPFVQQFELKDVYPHFCDRKTKLLPLADVPYVLRAMGLTIYSEEEKSIREQVEKVDGMGKPVSMKTMQSWIEEHGSKYVKSYDDAYSAVGTLCHEGIIGDKSGRIQVPFLRHLVSEVGDKIKAETFDKIMKGGDSAVGTAIKGDSCPLDEFLNFLQK
Ga0187735_186349	Ga0187735_1863491	F003025	TGSLFALEWWMHFPDEGAGGKCNKEFWSKWIPRRVKHNAFVLSLWACVWLLGTYPLGRPLSEGWRFMFTVSVFARIGYSAAWMFITNFTHSLPWNEFLAQDPGRTWPVLHNVMAMVLGGKHRWNEMLFHDVHHAFPNAVGTLSQRGRFHGWEKVHDAAAEVLHRGLWKPNGDEETQMQKTQKKRSMMMKQGK
Ga0187735_189813	Ga0187735_1898131	F003866	LRAAENQPKLPKNTTYRAMGDDGDVRLTTVSKDGEKLGNLIPAGSMSSTEGKSAIPGKWKIPGVQEPVELKVSGSSVKSVQQPFGNQPFLGEIEEGEKMLGLHVTLGGFPMKAWMKKEGQQTVLTFSNGGRWSKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300030662: Metatranscriptome of Jellyfish Cassiopea xamachana and symbiotic dinoflagellate Symbiodinium from Pennsylvania, USA - 10_T1E_StrKB8 developmental time series (Eukaryote Community Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences