Sample 3300031171

3300031171: Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P3_L6_4mM_2 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300031171 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128781 \| Gp0267092 \| Ga0228571
Sample Name	Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P3_L6_4mM_2 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	30240666
Sequencing Scaffolds	19
Novel Protein Genes	29
Associated Families	27

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	2
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	13
All Organisms → cellular organisms → Eukaryota	2
Not Available	1
All Organisms → cellular organisms → Eukaryota → Haptista	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Chrysochromulina Tobin Associated Microbial Communities From Unialgal Haptophyte Culture In Seattle, Washington, Usa
Type	Engineered
Taxonomy	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified → Unclassified → Defined Medium → Chrysochromulina Tobin Associated Microbial Communities From Unialgal Haptophyte Culture In Seattle, Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: Washington
Coordinates	Lat. (^o)	47.6519	Long. (^o)	-122.3113	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F007565	Metagenome / Metatranscriptome	348	Y
F008291	Metagenome / Metatranscriptome	335	Y
F009117	Metagenome / Metatranscriptome	322	Y
F024710	Metagenome / Metatranscriptome	204	Y
F026197	Metagenome / Metatranscriptome	198	Y
F028443	Metagenome / Metatranscriptome	191	Y
F030329	Metagenome / Metatranscriptome	185	Y
F030342	Metagenome / Metatranscriptome	185	Y
F039952	Metagenome / Metatranscriptome	162	N
F039966	Metagenome / Metatranscriptome	162	N
F042134	Metagenome / Metatranscriptome	158	Y
F043736	Metagenome / Metatranscriptome	155	Y
F046205	Metagenome / Metatranscriptome	151	Y
F047450	Metagenome / Metatranscriptome	149	Y
F063286	Metagenome / Metatranscriptome	129	Y
F063743	Metagenome / Metatranscriptome	129	Y
F066385	Metagenome / Metatranscriptome	126	N
F068493	Metagenome / Metatranscriptome	124	N
F069666	Metagenome / Metatranscriptome	123	Y
F079587	Metagenome / Metatranscriptome	115	N
F080772	Metagenome / Metatranscriptome	114	N
F086468	Metagenome / Metatranscriptome	110	N
F087987	Metatranscriptome	109	N
F095000	Metagenome / Metatranscriptome	105	N
F098520	Metagenome / Metatranscriptome	103	Y
F102393	Metagenome / Metatranscriptome	101	N
F102720	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0228571_101241	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	2170	Open in IMG/M
Ga0228571_103865	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1395	Open in IMG/M
Ga0228571_104023	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1370	Open in IMG/M
Ga0228571_106040	All Organisms → cellular organisms → Eukaryota	1128	Open in IMG/M
Ga0228571_106153	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1117	Open in IMG/M
Ga0228571_107631	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1000	Open in IMG/M
Ga0228571_107696	All Organisms → cellular organisms → Eukaryota	997	Open in IMG/M
Ga0228571_107865	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	987	Open in IMG/M
Ga0228571_108682	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	934	Open in IMG/M
Ga0228571_109114	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	909	Open in IMG/M
Ga0228571_113070	Not Available	735	Open in IMG/M
Ga0228571_113525	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	720	Open in IMG/M
Ga0228571_113697	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	714	Open in IMG/M
Ga0228571_114031	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	702	Open in IMG/M
Ga0228571_115202	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	667	Open in IMG/M
Ga0228571_117426	All Organisms → cellular organisms → Eukaryota → Haptista	607	Open in IMG/M
Ga0228571_118009	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	592	Open in IMG/M
Ga0228571_119675	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	557	Open in IMG/M
Ga0228571_119869	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	553	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0228571_100433	Ga0228571_1004331	F087987	TFDVRNLDLFGYEPDYTFQGYRSNFGAYISVAVGFAVLLRFTTRILDFMYPTPLINENHLLFARDMSEGFALPTFGFIFKRSGWRPFYDPTYFTFSFQQGTSGRASNSTYVDLGDEPCSFVDAYGRIIEDEACCPAISGEVVGSFFDSRFRFVHVSMNRCHNGTDSQGRTQPGPCRRPDEIDRLIYEGTVTLAISQRDLDTGSKDEYTQLVSIKKQFTRHIHATYDMFFTVRFVTIQPRAFFDEYDVVNMKRQYVVLDRQEASFTDFQAERLGRWNQVDPTYVPKYAGFFFMLSDEKIDQQRMYLTIFDMFEALGGTLCFFYFVLRLVALRWNHVHFTQQIKGLDLRDLNRDMFDQFGRLVDRSFQVPRELQDMHNVANLK
Ga0228571_101241	Ga0228571_1012411	F095000	ELQHKHDELAAARDSLDAAAADSARASAVRVKLEAGFQHMIGANAVFEIEDFLQADALVCASHVFCAAGFEWKLWVKPYSGPNEEHVGLYLTPAEDLDQVYTADYALAIVGRQGHILQRALDGGRPKLQGRKAGHGWPTFVTRSELEASATDPASCLLQADGRLIVTCSGLSNVRPRMPQDDAAGLARTL
Ga0228571_101889	Ga0228571_1018891	F024710	RAVGPSAAEQRSAAKMPCYWAGNSTPSPIFRTNRSGNGVGSSPGINPITPYTTASLDYRASWISGQTVADTKAAMTNPNIQGKLFGEAINNESKAFANSMARPAKPTVLPPPVKVQHYNETSGLERSLPTNVPDHPTAIQVNGLRQERTEHVMCPGHVFGVNSYDARVLCGNWAEERSDKSYNPSDLKASTGNDWWMETTYGEMTKNRSHLVRPPKGSNSDTMYTQKGSAFATGVKEESKSSNAEPCVPEVDDYLKGDHRSASRRPGNYVSYQAGRQHLIAAVGGKINELPFYESTTMAGYQDPAEKVLPNCTVRCDLKYKPPFQIRDPGRDGKSKMLCTVKSNEFACDDPVYNSTQIIGRPVKGKQNTYTVESYRNTWTKSPPEIVAAGLCDTSTYKACFTVPDLSKVDATRKMAGHVGSWH
Ga0228571_103582	Ga0228571_1035821	F079587	SNAGGRRPRLIAAMEINLKKVEKSTEFWTVLEFWTVLDFSRTSEHTPSIRSSSQSTMLSTLALATMIPTAFISIDTSPFFYNDLMAVQAMMRPPPSSSWRCTDEECMMSYPVSHLEDASLRLVLGDDGKTITLSGERKIEGCQCQPRDDVIITLPFTPSAPEALSSSIDKGRLTITLSKHAKIPEAKTILIKRQEPKTADASQIRFVPQESASASVVEEKMLDAFDKFRAVAALARKDGQETPAQASNASETVNVTAQA
Ga0228571_103865	Ga0228571_1038651	F030329	IKANATNSAQVRAQRQDEKRDAQSRGNDEPQWKKKPAAKLKGTSSGEEAKKDQELVLYEFLNMLVRIAFWRANPTFGNFVDKDKDGKKDKEEPTPVAYALSNMLNEIILPRAKRENSAAFRQKEMQDSKLIAVLDSYKPKLKEWYDKKVSDDSEGPRNGIISDKLGFEEWNRVLDRQDIVGESEIEQMSEITGDESTKGNIKVRLSIPTCKAAFMDSQNAEQLGVGQADSTSEQAVLDFDEWLECIARIACSKYSAIKQMDPAAKVKAFLQNFFGEMSEEDCMRTSTYIRAVRYDLGDSVPLKDESPEEHAAFLAEFKQLDLSGLYGFPLWEAEVHDLLHANFRELASIFRGYCKSLGEGSSDESAKTMDLEEFHDFVIDVGLETKLHTNKAAAPALYVFEQMKEQFTRADKSGKGLAGPAANSELVLYEFLNVITRVSFYRLNPEYGELTMEHQDTLLPVPQC
Ga0228571_103961	Ga0228571_1039611	F009117	SGKGLAGPQANAELVLYEFLNVITRISFWRINPECGELEMDHQDTILPVPQCLEKTLRECILPKAHRDDAGQFRGTVMQMPEVQASLAEGRPRLQAWYATIPLDDNQKVGITQWVSALQALNVIGTFTCTQGSDIVGDDRVGTEFKCRLSVPQAKAAFVNAQKETGGSVEDVSLDFDELLECIARCGVDKYRAVEQIKTGEKVAAMIANILGDLNEEQVITAATYITAERFSPGTSPPKGVAAENHKEWLTTWELLQLSTLPGFPLWEKEVYDLLALHLVELQSIFKAYASSSLQGSATDMDMEEFHDFVIEAGLITDLYGFDAMSGQFTKANAGSNDTVLELHEFLTMLVRISFFRANPQYGMRKGKDQKNADKFDEVPLPGCLSDMLTKLVLPNARRETHAQEFLEKIWPMSEVSSALDAQKEAIATFYEMVSAGRPFLELSQWFDALAGKLLFSDV
Ga0228571_104023	Ga0228571_1040232	F102393	MRLSLSSLSRSAELSPLSPPSPGLVPCVQLFGSVSGSVSKACAPKSHALLAHSRPPTSSTRMMLCCKPSKFNVTCWSFLTLLSACVILACAVTALDASKGFKDATMCILTNMADLKNSNMTGGNMTNVPVKLDPTVLNVASAVIDWWMYAMIAPGAAYFVILVIAVFFSCVAALCSKCCASVTSKAFIFLGWFVAVVTLAFFCVCAVLGIFTQIPMTEAFWIENVESPCNTSVVESTHQFNLANASAQDCVRLYGQSNCADSTQQLNNAAEQLTKFTLMCSCASAWLYKSKPLAAPGVVGALATLLAFFLSLGTCCTLACCYSFTAAMEKNEPKK
Ga0228571_104768	Ga0228571_1047681	F047450	AEDAVEMTMTEFKDLVKDVGLETKDLKFDVMCNMFKKANALNSNAVMQQRKQEAGTSAAKMEGVGSASKAMAQTNKRSKSANKGREDEMDQELVLYEFVEVLIRIGFWRANPFHGINKLANKLVPLPDCLHQMLHEVVLPNAKRDDSALFKERLAGDKSMLTALSRYEKRLKEWFDVHTQSMFLRGEGRKLQYQQWQDLLKKGWGADARAQGYTPGNGVGNWEIFQDSEITGDERCRNKFKISLSLPQAKFAFINSQSLDQLTVGQAKDTDAMTTLEFDEFKECIARCALDKYKPIRQMSAAVMITSFCKNLLGEENTEECMNTATLIKAERYNWKRYSVTLPGQALKDHKKWLQVWQRLDIGDMYYFPLWEKGVHDVLQKHFKDLCLIFFAYCRSMLGSASAEDAAEMEMAEFKDFVDE
Ga0228571_106040	Ga0228571_1060401	F043736	IFKAYAAGTIGTGAQEMDMEEFHDFCIEANLVTDMYGFDAMSGQFTKANAGSNDTVLELHEFLTMLVRISFYRANPHYGMKSMAKKDNVKTDKSLVEEVPLPGCLSDMLTNLVLPNARHDTYAQEFAETTLPLPEVQAALGAQLEKLSQFYELVSAGRPFLELDQWLKTLEGKLLFSDIMVDGYVVRLTEPQARAAFYASAATPSSGLLPDELPVCVARTACDKYKGVTPMGPGAKVTGFLANLLGDDDEEDVVLAATGGKALKD
Ga0228571_106153	Ga0228571_1061532	F069666	ALAQRVLCSRLCRRDGQPVPTRLDEITDLDVEQLIEAGRPGDAAVAGRMLPGLARLHGYGHVVDVAAVRAADLQCEMVGDWRRPSLLHGAAKDALNSCITGEGEPPLRLTIAAVACAGSGVICGIPVQQLREDSVEVLNLFDRGLHAPAAMLVAYLIPATSVLKNCKLLKNRFDVESAKKLTKMGMEKSIMLSGLTCDRTAANFMNEGLQPADAILIASDLQVVTTLYLSGNNIGTRVPSRSRRR
Ga0228571_106501	Ga0228571_1065011	F063286	AVRSWIQNLFFEKSPEMCMWEATVIKADRYDWQKQTKMLPGFSPATHKLWLQVWDSMMLMDIHHFPLWEKGVHDTLQQLFPVLMRIFSNYTKGVSGIDSAADALEMELEEFHDFIKDAKLETRMINFTTMTNVFAKANAANTADAMKDRQAGKRNVQVQREMEQMARDSRNAGNDGKKENPKEVKAIDALAKHLLADRFANDYPEPGSMKVTKPDNRLTLTEFCGCLVRISFLRANPKHGQYDNKAKLIELPGCLKKMLEEVVIPNAKQDMSSLFRDEIAQDAEVQAVCEEYRDRLFFYYSSINALAAAERANAKLTKGGALEAKEQKLALETWMDISRGYLFLVKKKGMKHMEARRFTPKG
Ga0228571_107187	Ga0228571_1071872	F007565	PRLPRPLTLARALRRTMGTSAGFFGITYQGATNGLASVTLSIFNCDHPDDVAWCKHVFDYSTNNSGFLTKAKVPDFLRLFYRNRPQGNTLSGTYLYSYPENEKEFIDALFGKDGQLTFATLIEALKEAQGRFAEPAAPLEYGSAAVLRNDKTKHTRCVLNPQQRFRKPIATSQEVGWELYKEVKPELVASFNDTGGPGTPFRLRTSATTQFADAIEKITWGRSIGGEFSAYATRKLVAFGGQGMGV
Ga0228571_107631	Ga0228571_1076311	F042134	MNDPKLLAVLENYKPKLKEWYDKKVLDDSEGKGLVSDKLGFDEWLRVLDRQDIVGEWEIEQMSEITGDESTKGNIKMRLSIPTCKAAFMDSQSTEQLTVGKGDAVSSASVLDFDEWLECIARMAVAKYSAVKQMENSQKVKAFCMNFFGEASEEDCMRQATYIRAVRYDVSESQPLKDETPEEHAAFLAEFKQLDLMGLYGFPLWEAEVHDLLHANFKELASIFRSYCKSLGETATSDSSRTMDMEEFHDFVIDCGLETKLAIMKGAEPAVYTFNQMKECFTKADKSGKGLAGPAANSELVLYEFLNVITRVSFGRINPEYGELTMEHQDTIY
Ga0228571_107696	Ga0228571_1076961	F026197	LDKGPTGLMMMLPVYLTLLFGAVAMPFSSWINETTLCANGQCNKPNSMYERIADIQPGYQWNDAGGYCGSWATQRAVLSKGAWISQQQVRDHTHNCGGHDSEILSCNIDEAWKNLKIEYDAFDFNKEPVPQTAAYAKWLKAQLVQGHVVAWMIMWSGQDYPIYNLVPPAGMYGHVEPVIGIQSNHPLNDTTVYDDDVVVHFTDGGVNTVHRPISTLPCKWAGMGKPADCGEYSYGVGNPYGFGWAAKGFTQDPKPYQLAALKIQPWEREPDTRSGEKPEPLAGTLTAYELTPGATYDIYRWDSVKEAFTYTNEYKKITFAATTDTYVYTDDK
Ga0228571_107865	Ga0228571_1078651	F066385	SLRPRCLPEPAFTYIMATTAIRELQMAALPAAVGTVAILYSNLANMFAMGKFRYANKGVEVHPYKPWSDTTPNAEEHFRAYKAFENGMEWTVLAVPALWLYVLYTPAVPHVGKFLPWTGALLAAAFAYYNTKYLEGYAQSVEARLPPFKARTNALMVLFTGALASMAASFLTTIGIVKMITPKVCERM
Ga0228571_108217	Ga0228571_1082171	F063286	FAKANASDSATVFMERMAGRRNVQVQRELEEIARQAARSAHDGKKGETKFQELPKHLTCDRFSSDYPEPGSMKIKKPDNRLTLTEFLGCLVRIAFLRANPKHGQYDNKAKLVELPGCLKKMLEEVLIPNAKQDMSSLFRDEIAQDAEVQAVFEEYRSKLTFYYQEVNLLTAVKGKIDNKLSMETWMDIARGFLQFTKKKGSKHMEKAKVQTKVGEGAGLPEGAFVGDCTVQRESYITGDERCKEKYTCRLTILEAKYAFLNSQSLEQMAAGDAGDNDAMATLDYDEFIECLARCARDKYGEIKLMSLADGVRGIFMNILGE
Ga0228571_108682	Ga0228571_1086821	F028443	LTPVPESTQILLEECILPKAKRDTSGEFKKVLASDASTQAVLGEYREKLQNWLRPILRKERTTQNPNPQMTYSLWVALMDGPDSEQKESGKKPPSPKMVGEWSVQQESQITGDERTSRKNQITFKAALSIPQCRWNFLRSQTIEQVEAGDVDADSSAVATLDFTELGECIARCAVNMYEHLMKTFLPSHDRKAMTMADATRSFLRNLLSEKTPEMCMWEATVIKADRYDWQKQTKMLPGFSPAQHKLWLKCWSQVTLIDVHHFPLWEKGVHDTLQQHFSALMRIFSHYSNGVSGVDSVADALEIELEEFHD
Ga0228571_109114	Ga0228571_1091141	F030342	HAERYNWKLSKPLPGQTLAAHRKWLDCWQNIEIADLHYFPIWEKSVFGCLQECFSDLTNIFAHYSKSIGGSTTAEDAVEMTMSEFKDFVKDVSLETKDLRFDVMQNMFKKANALNNNDAHFQRKAEQGTSAAKEETAGSTFKALATTSPGRSKKAAAQRDDELDQELVLYEFVEVLIRISFWRSNPYHGIHKLATKLIPLPDCLVQMLQEVVLPNAKRDDSALFKEKLATDKALQSAIESYDSKLKEWFDVHTQSMFLRGQGRKLQFQQWQDLLKKGWGTDVRKVGFTPGGGVGSWQIYQDS
Ga0228571_112227	Ga0228571_1122271	F068493	LRKGLSRMVNRKVALGFDAWRAAVAPRDDHMSKALQHFLNRELSRGWGAWYEAWEVLKAKRESMRKSLGHLLHRGLSRGWGAWMEMLEERAAFLQLLSKGVFFMLNRKVATGFAALRSLSPPRTADPMSRALNYFMNRELAHGWAGWQTAWVEQKAKRETMRKSLGHLLNRGLSRGFGAWLEMAIERAVFLQKLRKGLSRMVNRKLAFGFDRWITAFAPRDDPMSKALLYFLNRELSRGWVAWYETWEVLKAKRE
Ga0228571_113070	Ga0228571_1130701	F039952	KECGLARKAEVADARKFIAMPSEDEEVQELKQMFSSPTKSKKHRSPARKPAWDSTPLRSRPSALVGLRPVTREPWAIDEDVYNRKFEMRDVGVPDRYLDKTARVKENNSKYVDYLCRFDQKYSEMNGGYNRFDGNPFT
Ga0228571_113525	Ga0228571_1135251	F039966	SDGTERVRLRAREGEAVEWTRRVAQRAGTLKDMMDDAPPEDGVYPVPTIAAAELAVLREMCEADSMPARLEQCSISELFRLVEGASFLDAPGALNHAQHALASRLNGKRADELTELLGATDGFGSAEERVAALAEPAFSPEGQLSEAMVGYAGGAPALQPQLTLWMAVTDDAKEVALGMVDVVTLAELKGVNRSWSALARRVLCSRLSRCEGQPAPTQLAEITDLNIKVLVDAGRPWEAA
Ga0228571_113697	Ga0228571_1136971	F008291	RRTRSATRRAAEANGLRMANIPDLRSVQIASASLANDVNNLRRAVAKVEVIPEEDAKVWSFQGASGRRVLVDRRAPAPMPYGNARYTASSWKVGARSTEVHPITGQHTYDTGNLYRTVHWKDEGFGLNGRFTDAIALAGMWRNDGLNTAATRSKAVSDPTGWGTPKDNISFM
Ga0228571_114031	Ga0228571_1140311	F046205	WYNEATSDDSKQTDITDKLSMEQWMRVCDEKDLVGIWQCYRESDITGDPACKTEYKWRLSMPQVKMAFMDSQPSDQIGAAQSSGTDALAVLDFEEFLECCARLGIDKYRAVREVSPALAVQGFLQNLLGEKTPDEVVIEATYIHAKRYDAKETKPLKGESQADLDKWLDCWSRMEIMDVHLWPIWEKEVHDIMHPLFKELQLIFLAYTRSISEDSAEDAMEMSMDEFHDFVVD
Ga0228571_115202	Ga0228571_1152021	F039966	IVGPKLPAIKMTDGQERVRLRAREGEAVEWTRRVAQRAGTLKDMMDDAPTEDGVYPVPTIAAAELAVLREMCEADSMPARLEQCSISELFRLVEGASFLDAPGALNHAQCALATRLNGKRADELRELLGATDDFGSAEERVAALAEPAFSPEGQLSVATTGSAAGPPALLPQPSLSGMAVTYDAREVALGMLDVGTLAELKGVSQSWLALARRVLCSRLSR
Ga0228571_116396	Ga0228571_1163961	F098520	GGPKLYTSEYRAATLDDTTTGLDGGVAAGKMTKSRTGYTPPKYGVGDAAGNYRKERMLVHKSRPEAQFGAPPPFGVDPVVPAATQARFSISSATIGGNKQERIIDYQVREEPPRLGAPAANAIVAAGQRPLIPVGARKI
Ga0228571_117426	Ga0228571_1174261	F080772	RTMSHDPIPKPGSKLRARIKDPGLDPVIAMTRERHKKELQIEAQKLVVSGLTGAVLHKMLELKAVEREILELTEGVQEYQDQIDLLNDRKHDVQKNQVEKAAWCATFDKLIGPFEAKYEECKGEVKVSFDYAKSKYAISLQQLIDDFGFNPTYKRWFDEF
Ga0228571_118009	Ga0228571_1180091	F102720	LPDCLVQMLQEVVLPNAKRDDSAIFKEKLKNDKSMQEALDSCEASLKVWFEVHTQSMFLQGKGRKMKFDQWQELLKKGWGQMQSNNEPQPGFTPPKQVGSWQIYQDSEITGDERCRNIFKVSLSMPQAKFAFIDSQNPDQLGVGQQTADSASTTLEFDEFKECIARCALEKYAPIKQMSPAAQIINFVKNLLGTENT
Ga0228571_119675	Ga0228571_1196751	F063743	QTLPGQSLKEHKKWLEVWQRLEISDMYYFPLWEKGVHDILQKHFAELTLIFLAYCRSLLGSGSAEDAMEMEMAEFHDFIDECGLETKQVNFDLMTNNFIKANATNSGAVRDQHAESRRTSATKQDGRTTEVVAKVKGTNDGQEAKKDQELVLYEFIGLLVRIAFQRANPTFGNYGNKKAVVHLCN
Ga0228571_119869	Ga0228571_1198691	F086468	KMEIDLLGEPRLKNGLTYYPGVLTDDGSVILGNIVRLQLMAEGSQPYIGYGFLKGLWLWRDQPYMRVQYMAPTRMDLPRDAIAYRAAPDASGIPELMVTNRVGDLHLNALLGPVYIEGSPLMGQLFQENVGASADGFILMRHLDPAVQRVQPLDEAFRLTPIVQAFPKTVLRAMLVLRILPTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031171: Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P3_L6_4mM_2 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences