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Sample 3300031483
3300031483: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_N_R2 (Metagenome Metatranscriptome)
Overview
Basic Information
IMG/M Taxon OID 3300031483 Open in IMG/M GOLD Reference Gs0132857 | Gp0330667 | Ga0314805 Sample Name Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_N_R2 (Metagenome Metatranscriptome) Sequencing Status Permanent Draft Sequencing Center DOE Joint Genome Institute (JGI) Published? N Use Policy Open
Dataset Contents
Total Genome Size 5228071 Sequencing Scaffolds 1 Novel Protein Genes 1 Associated Families 1
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Cordycipitaceae → Beauveria → Beauveria bassiana → Beauveria bassiana D1-5 1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Soil Surface Biofilm Microbial Communities From Soil Inoculated With Nitrogen-fixing Consortium Dg1, State College, Pennsylvania, United States Type Environmental Taxonomy Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil → Soil Surface Biofilm Microbial Communities From Soil Inoculated With Nitrogen-fixing Consortium Dg1, State College, Pennsylvania, United States
Location Information
Location USA: Pennsylvania Coordinates Lat. (o ) 40.7997 Long. (o ) -77.8629 Alt. (m) N/A Depth (m) N/A Location on Map
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Associated Families
Family Category Number of Sequences 3D Structure?
F057456 Metagenome / Metatranscriptome 136 N
Associated Scaffolds
Scaffold Taxonomy Length IMG/M Link Ga0314805_11239 All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Cordycipitaceae → Beauveria → Beauveria bassiana → Beauveria bassiana D1-5 1067 Open in IMG/M
Sequences
Scaffold ID Protein ID Family Sequence
Ga0314805_11239 Ga0314805_112391 F057456 IIQDLSLLYLVILCPAYATVRFVDNQTVRQDLAVELFRCKQRLF
