NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F027240

Metagenome / Metatranscriptome Family F027240

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F027240
Family Type Metagenome / Metatranscriptome
Number of Sequences 195
Average Sequence Length 48 residues
Representative Sequence GLPGQATGEVTGLNLVDVGPSILSLYGIDAPEGAVGRSFL
Number of Associated Samples 172
Number of Associated Scaffolds 195

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 61.54 %
% of genes from short scaffolds (< 2000 bps) 60.51 %
Associated GOLD sequencing projects 165
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (58.974 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.974 % of family members)
Environment Ontology (ENVO) Unclassified
(19.487 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.538 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 10.29%    β-sheet: 5.88%    Coil/Unstructured: 83.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 195 Family Scaffolds
PF01583APS_kinase 89.74
PF00478IMPDH 3.08
PF00534Glycos_transf_1 2.56
PF03972MmgE_PrpD 0.51
PF11706zf-CGNR 0.51
PF13426PAS_9 0.51
PF12867DinB_2 0.51
PF00732GMC_oxred_N 0.51
PF10335DUF294_C 0.51
PF07336ABATE 0.51

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 195 Family Scaffolds
COG0529Adenylylsulfate kinase or related kinaseInorganic ion transport and metabolism [P] 89.74
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 0.51
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.51
COG5516Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-bindingGeneral function prediction only [R] 0.51


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.97 %
UnclassifiedrootN/A41.03 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908016|OU_2_1_1_newblercontig48077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium777Open in IMG/M
2140918007|ConsensusfromContig25960All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1066Open in IMG/M
3300000550|F24TB_10225402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300000858|JGI10213J12805_10556309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium850Open in IMG/M
3300000886|AL3A1W_1776406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300001538|A10PFW1_11145005All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300003993|Ga0055468_10080548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium887Open in IMG/M
3300003998|Ga0055472_10245243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300004114|Ga0062593_102284376All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300004114|Ga0062593_102639593All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300004156|Ga0062589_101728285All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300004463|Ga0063356_100427815All Organisms → cellular organisms → Bacteria1716Open in IMG/M
3300004643|Ga0062591_101560623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium663Open in IMG/M
3300005181|Ga0066678_10440459Not Available866Open in IMG/M
3300005526|Ga0073909_10567275All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005553|Ga0066695_10820657All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005557|Ga0066704_10918628All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005559|Ga0066700_10524456All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300005564|Ga0070664_102108719All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005568|Ga0066703_10506387All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300005615|Ga0070702_101732538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300005843|Ga0068860_101924356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium613Open in IMG/M
3300005937|Ga0081455_10868227All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005985|Ga0081539_10500033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium503Open in IMG/M
3300006046|Ga0066652_102028369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300006057|Ga0075026_101087576All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300006194|Ga0075427_10029123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium902Open in IMG/M
3300006577|Ga0074050_11999492All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300006846|Ga0075430_101269546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium606Open in IMG/M
3300006865|Ga0073934_10129323All Organisms → cellular organisms → Bacteria1844Open in IMG/M
3300006903|Ga0075426_11471248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300006954|Ga0079219_10520480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium841Open in IMG/M
3300009012|Ga0066710_104790027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300009089|Ga0099828_10681960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium923Open in IMG/M
3300009101|Ga0105247_10303383All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300009131|Ga0115027_11590977Not Available540Open in IMG/M
3300009147|Ga0114129_11265636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium916Open in IMG/M
3300009816|Ga0105076_1116256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300009817|Ga0105062_1080563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300009823|Ga0105078_1032886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium641Open in IMG/M
3300009945|Ga0117932_1015985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium967Open in IMG/M
3300010029|Ga0105074_1075197Not Available617Open in IMG/M
3300010036|Ga0126305_10372139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium938Open in IMG/M
3300010038|Ga0126315_10439702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium825Open in IMG/M
3300010040|Ga0126308_10435959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium878Open in IMG/M
3300010041|Ga0126312_11287809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300010147|Ga0126319_1213573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium811Open in IMG/M
3300010147|Ga0126319_1552078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium757Open in IMG/M
3300010335|Ga0134063_10452308Not Available636Open in IMG/M
3300010375|Ga0105239_13511154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300010399|Ga0134127_10985171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium902Open in IMG/M
3300012206|Ga0137380_10537911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1026Open in IMG/M
3300012210|Ga0137378_10433954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1217Open in IMG/M
3300012210|Ga0137378_11461109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium596Open in IMG/M
3300012385|Ga0134023_1089181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300012393|Ga0134052_1326206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300012399|Ga0134061_1060699Not Available699Open in IMG/M
3300012404|Ga0134024_1354013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300012407|Ga0134050_1002048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300012409|Ga0134045_1004900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium649Open in IMG/M
3300012680|Ga0136612_10055782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1984Open in IMG/M
3300012911|Ga0157301_10433284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300012957|Ga0164303_10225872All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300012958|Ga0164299_10481880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium820Open in IMG/M
3300012988|Ga0164306_11184372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium640Open in IMG/M
3300014326|Ga0157380_11108258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium831Open in IMG/M
3300015359|Ga0134085_10043386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1784Open in IMG/M
3300015371|Ga0132258_10592609All Organisms → cellular organisms → Bacteria2782Open in IMG/M
3300015374|Ga0132255_106201119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300017959|Ga0187779_11237475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300017965|Ga0190266_10185239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium978Open in IMG/M
3300018027|Ga0184605_10000891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9296Open in IMG/M
3300018032|Ga0187788_10279098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium671Open in IMG/M
3300018054|Ga0184621_10135554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium884Open in IMG/M
3300018056|Ga0184623_10453620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300018089|Ga0187774_10075135All Organisms → cellular organisms → Bacteria1590Open in IMG/M
3300018089|Ga0187774_11429995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300018429|Ga0190272_11717961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium650Open in IMG/M
3300018431|Ga0066655_10178722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1291Open in IMG/M
3300018465|Ga0190269_10252720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium994Open in IMG/M
3300018481|Ga0190271_13400619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300018481|Ga0190271_13577348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300018482|Ga0066669_10720429Not Available879Open in IMG/M
3300020202|Ga0196964_10527880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300022694|Ga0222623_10367990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300025310|Ga0209172_10085391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1845Open in IMG/M
3300025324|Ga0209640_10683724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300025899|Ga0207642_10318122All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300025933|Ga0207706_11262431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300025933|Ga0207706_11620306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium524Open in IMG/M
3300025939|Ga0207665_10866394All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300027006|Ga0209896_1011760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium950Open in IMG/M
3300027006|Ga0209896_1012235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium932Open in IMG/M
3300027561|Ga0209887_1095810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300027775|Ga0209177_10209593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium698Open in IMG/M
3300027952|Ga0209889_1002513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5212Open in IMG/M
(restricted) 3300028043|Ga0233417_10331113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium692Open in IMG/M
3300028380|Ga0268265_10821048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium908Open in IMG/M
3300028771|Ga0307320_10286686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium653Open in IMG/M
3300028771|Ga0307320_10381401All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium565Open in IMG/M
3300028793|Ga0307299_10023723All Organisms → cellular organisms → Bacteria2207Open in IMG/M
3300028807|Ga0307305_10144586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1098Open in IMG/M
3300028828|Ga0307312_10505573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium798Open in IMG/M
3300028828|Ga0307312_10905896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium584Open in IMG/M
3300028881|Ga0307277_10112711All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300028885|Ga0307304_10624237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300030006|Ga0299907_10188781All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300030010|Ga0302299_10616898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300030511|Ga0268241_10066071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium797Open in IMG/M
3300030620|Ga0302046_11265906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300030990|Ga0308178_1034587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium880Open in IMG/M
3300031114|Ga0308187_10101796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium893Open in IMG/M
3300031229|Ga0299913_10739386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium960Open in IMG/M
3300031562|Ga0310886_10768161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium605Open in IMG/M
3300031834|Ga0315290_10641734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium919Open in IMG/M
3300031913|Ga0310891_10250145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300031949|Ga0214473_10851522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium977Open in IMG/M
3300032013|Ga0310906_10421790All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium886Open in IMG/M
3300032018|Ga0315272_10665405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300032342|Ga0315286_11881697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium560Open in IMG/M
3300033813|Ga0364928_0140270Not Available588Open in IMG/M
3300034164|Ga0364940_0055967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1069Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.97%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand6.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.62%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.59%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.59%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.05%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.05%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.54%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.54%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.54%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.54%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.54%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.03%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.03%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.03%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.03%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.03%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.03%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.51%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.51%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.51%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.51%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.51%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.51%
Hot Spring Water ColumnEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Water Column0.51%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.51%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.51%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.51%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.51%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.51%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.51%
Environmental → Unclassified → Unclassified → Unclassified → Unclassified → 0.51%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.51%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.51%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908016Sample 642EnvironmentalOpen in IMG/M
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000886Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002407Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009799Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30EnvironmentalOpen in IMG/M
3300009801Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009945Combined Assembly of Gp0139326, Gp0139349, Gp0139350, Gp0139351EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014265Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2EnvironmentalOpen in IMG/M
3300014272Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1EnvironmentalOpen in IMG/M
3300014318Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rdEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022309Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027006Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027870Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)EnvironmentalOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030010Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
OU_024809602124908016TGVFAMAGLPGQPLGRQEGLGLMDVGPSILSLYGVEPPPGTIGRSFL
Perma_A_C_014879202124908032SoilVMKGAPGQAGGRKEGMNLVDVGPTILGMYGIETPEGAVGRNFL
A_all_C_033755202140918007SoilHDRTGIFAMKGLPGQPMGRVEGMNLVDVGPTILKLYDIEAPEGAVGRSFL
F24TB_1022540213300000550SoilGPDGANHDRTGVFALSNLPAQPVGSVEGLSLVDVGPSILSIYDIEVPEGAVGRSFL*
JGI10213J12805_1055630913300000858SoilVWAMAGLPGQATGEVAGLSLVDVGPSILSLYGIEAPEGAVGRSFL*
AL3A1W_177640613300000886PermafrostAFFSMINLPGQPMGKIDGMSLVDVGPSILSLYGIEAPTGAVGRSFLK*
C688J14111_1001302013300001305SoilVDGLNLVDVGPSILSIYDIDATEALPTAVGRSFLQ*
A10PFW1_1114500523300001538PermafrostAAFFSMINLPGQPMGKVDGMSLVDVGPSILSLYGIEAPTGAVGRSFLK*
C687J29651_1018513713300002407SoilAGLPGQPTGETNGLNLVDVGPTLMELYGFEVPEGAVGRSFL*
Ga0055468_1008054813300003993Natural And Restored WetlandsGTDGANHDRTAFFSMVNLPGQQMGRVEGMSLVDVGPSILSLYDIEAPAGAVGRSFLQ*
Ga0055472_1024524323300003998Natural And Restored WetlandsNHDRTAFFSMVNLPGQAMGRVEGMSLVDVGPSILSLYDLEAPAGAAGRSFLK*
Ga0062593_10228437623300004114SoilANHDRTGIFAMRGLAGQPMGEVSGMNLVDVGPTILKLYDIEAPEGVVGRSFL*
Ga0062593_10263959313300004114SoilGANHDRDGVFIMKGLPGQRAGKVDGMQLVDVGPTILDIYGIDSTEALPTAVGRSFLQ*
Ga0062589_10172828513300004156SoilDIGPDGANHDRTGIFAMRGAPGQPMGKVEGLNLVDVGPSILSLYGIDSHGAASRSFL*
Ga0063356_10042781533300004463Arabidopsis Thaliana RhizosphereDGANHDRTAFFSMVNLPGQTMGRVEGMSLVDVGPTVLSLYDIEAPEGAVGRSFLQ*
Ga0062592_10156086923300004480SoilPGQRAGKVDGMQLVDVGPTILDIYGIDSTEALPTAVGRSFLQ*
Ga0062591_10156062313300004643SoilHDRTGVFAMAGLPGQPMGEQRELSLVDVGPTIMQLYGGTVPEGAVGRSFL*
Ga0066678_1044045923300005181SoilDGANHDRTGVFVMSGAPGQPSGRVEGLKLIDVGPSILSLYGIDPPDGAQGRSFLS*
Ga0073909_1056727523300005526Surface SoilHDRTAVLAMKGLPGQPTGQVDGMNLVDVGPTILKLYDIEAPEGVVGRSFL*
Ga0066695_1082065713300005553SoilNHDRTGVFAMAGAPGQPTGVVVGLRLVDVGPTILTVFGLEVPAGAAGRSFLQT*
Ga0066704_1091862813300005557SoilANHDRNGVFAMAGAPGQPTGRQEGLRLIDVGPTILSLYGVQLPESEGRSFL*
Ga0066700_1052445613300005559SoilDTGPDGANHDRNAIFVMTGLPGMEPGPRQGLRLIDVGPSILSLYGLEAPEGALGRSFL*
Ga0066700_1109187323300005559SoilTGRVEGLSLVDVGPTILKMYGLEAPEGAVGRSFL*
Ga0070664_10210871913300005564Corn RhizosphereGANHDRDGIFIVKNAPGQPMGEVSGWNLVDVGPTILSLYGIDATLEGAVGRSFL*
Ga0066703_1050638723300005568SoilNHDRTGVFAMVGAPGQPAGVVDGLRLVDVGPTILSLYGLETPEGATGRSFL*
Ga0070702_10173253823300005615Corn, Switchgrass And Miscanthus RhizosphereANHDRTGVFAMAGMPGQPMGEQSGLSLVDVGPTIMRLYGAEVPEGAIGRSFM*
Ga0068860_10192435613300005843Switchgrass RhizosphereDGANHDRDGIFIMAGAPGQPTGKVEGLRLVDVGPTILSLYDIEASTALPGAAGRSFLA*
Ga0081455_1048204313300005937Tabebuia Heterophylla RhizosphereLPGQATGEVSDLNLVDVGPSILSLYGIEAPEGAVGRSFL*
Ga0081455_1086822713300005937Tabebuia Heterophylla RhizosphereANHDRMGVWAMAGLPGQVRGEVTGLQLVDVGPSILSLYGLEMPEGAVGRSFL*
Ga0081539_1050003323300005985Tabebuia Heterophylla RhizosphereFMMTGAPGQPSGRVDGLRLIDVGTSVLSLYGIDAPEGAEGRSFL*
Ga0066652_10202836913300006046SoilPDGANHDRNGIFVMNGMPDQRTGEAKDLSLVDVGPSILSLYDIATPEGAVGRSFL*
Ga0075026_10108757623300006057WatershedsDGANHDRTAFFSMMHLPGQPLGRVEGMNLVDVGPSILKLYDIEAPEGVVGRSFL*
Ga0075427_1002912323300006194Populus RhizosphereDGANHDRSGVFAMAGLPGQAMGEVPDLNLVDVGPSILSLYDLEASEGAVGRSFL*
Ga0074050_1199949223300006577SoilGANHDRTGIFAMKNLPGQPMGRVDGMNLVDVGPTILKLYDIEAPEGVVGRSFL*
Ga0074049_1282219123300006580SoilMMNLPGQPMGKVDGMNLVDVGPSILSLYDIEAPAGAVGRSFLQ*
Ga0066660_1099880123300006800SoilAGLPGQRTGRVDGLSLVDVGPSILSLYGIPAPEGAVGRSFLS*
Ga0075430_10126954623300006846Populus RhizosphereRTGVFAIKGAPGQPAGKVDGLRLIDVGPTLLSLFGVGSEDERERSFL*
Ga0073934_1012932343300006865Hot Spring SedimentDGANHDRAGVWAMAGVPGQETGEVEGLNLVDVGPSILSLYGIEAPEGAVGRSFL*
Ga0068865_10186007423300006881Miscanthus RhizospherePGQPMGEVSGWNLVDVGPTILSLYGIDATLEGAVGRSFL*
Ga0075426_1147124813300006903Populus RhizosphereGANHDRDGVLVMTGVPNQPTGRVDGLRLVDVGPTILSLYDIDASSAMPGAVGRSFLE*
Ga0079219_1052048013300006954Agricultural SoilTGPDGANHDRTGVFVMAGVPGQPTGRREGMSLVDVGPSILSLYGIDPPEGAVGRSFL*
Ga0075419_1076522713300006969Populus RhizosphereRTGKVDRLNLVDVGPSILSLFGAEPPQGVSSRSFL*
Ga0066710_10479002723300009012Grasslands SoilVFAMSGAPGQPSGRVDGLRLVDVGPTILSLYGIEAPEGATGKSFLR
Ga0105107_1111219713300009087Freshwater SedimentMSGLPGQATGEVKGLNLIDVGPSILKLYGIEPPDGAVGRSFL*
Ga0099828_1068196013300009089Vadose Zone SoilNHDRAGVFVMAGAPGQRTGPQDGLSLLDVGPSILSLYGVEPSEGTQGRSFL*
Ga0075418_1091962323300009100Populus RhizosphereMAGLPGQAMGEVPDLNLVDVGPSILSLYDLEASEGAVGRSFL*
Ga0105247_1030338313300009101Switchgrass RhizosphereDRDGVFIMKGLPGQTMGKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ*
Ga0115027_1159097723300009131WetlandANHDRAGIFAMAGLPGQQTGEVAGMNLIDVGPSILKLYGIEAPEGAVGRSFL*
Ga0114129_1126563613300009147Populus RhizosphereTGPDGANHDRDGVWAMAGLPDQPTGEVGGLNLVDVGPSILSMYGIEAPEGAVGRSFL*
Ga0111538_1071919813300009156Populus RhizosphereGLPGQATGEVTGLNLVDVGPSILSLYGIDAPEGAVGRSFL*
Ga0105075_104485413300009799Groundwater SandGQPVGSVEGLNLVDVGPSILSIYDIEAPEGAVGRSFL*
Ga0105056_106756623300009801Groundwater SandTGEVTGLNLVDVGPSILSMYGIDAPEGVVGRSFL*
Ga0105088_107787113300009810Groundwater SandLSNLPGQPVGSVEGLNLVDVGPSILSIYDIEAPEGAVGRSFL*
Ga0105084_106378923300009811Groundwater SandGLPGQATGEVTGLNLVDVGPSILSMYGIDAPEGAVGRSFL*
Ga0105076_111625613300009816Groundwater SandANHDRTGVFALSNLPGQPVGSVEGLNLVDVGPSILSIYDIEAPEGAVGRSFL*
Ga0105062_108056313300009817Groundwater SandGVWAMAGLPGQSKGEVTGLNLVDVGPSILSMYGIDAPEGAVGRSFL*
Ga0105078_103288623300009823Groundwater SandWAMAGLPDQPTGEVTGLNLVDVGPSILSMYGIAAPEGAVGRSFL*
Ga0117932_101598513300009945Hot Spring Water ColumnRAGIFAMTGLPGQPTGEVQGLKLVDVGPSILRLYGLEAPEGAVGRSFL*
Ga0105074_107519713300010029Groundwater SandRTGVFALSNLPGQPVGSVDGLSLLDVGPTILSLYDIEAPEGAVGRSFL*
Ga0126305_1037213913300010036Serpentine SoilTGTDGANHDRTAFFSMVNLPGQTMGRVEGMSLVDVGPSVLSLYDIEPPPGAVGRSFLQ*
Ga0126315_1043970213300010038Serpentine SoilTGPDGANHDRTGVFGLTNLPGQRTGEVEGLRLVDVGPSILSLYGIETPEGAVGRSFL*
Ga0126308_1043595913300010040Serpentine SoilTGPDGANHDRTGVWAMAGLPGQSTGEVSGLNLIDVGPSILSLYGIEAPEGAVGRSFL*
Ga0126312_1128780923300010041Serpentine SoilDTGPDGANHDRNGVWAMAGLPGQPTGEMTGLNLIDVGPSILSLYGIEAPEGGVGRSFL*
Ga0127499_124392313300010141Grasslands SoilTGRRDGLNLIDVGPTILGLYGIDPSEGAVGKSFL*
Ga0126319_121357323300010147SoilANHDRTGVFAMAGLPGQRTGRVEGLNLIDVGPSILSLYGIPAPEGAVGRSFLS*
Ga0126319_155207813300010147SoilNHDRTGVFVMAGLPGQPTGRREGLSLVDVGPSILSLYGIDPPEGAVGRSFL*
Ga0134063_1045230813300010335Grasslands SoilHDRTGIFVMAGVPAQPTGRFDGLNLVDVGPTILSLYDLDAPEGAVG*
Ga0126377_1149327223300010362Tropical Forest SoilMKGLPGQRTGLVEGLELVDVGPSVLDIYGIDSTQAMPNAVGRSFLN*
Ga0105239_1133385133300010375Corn RhizospherePGQTMGKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ*
Ga0105239_1351115423300010375Corn RhizosphereNHDRTGVFAMAGMPGQPTGEQSELSLVDVGPTIMRLYGAEVPEGAIGRSFL*
Ga0136847_1338305113300010391Freshwater SedimentPGQRTGKVEGLNLVDVGPSILSLYGIDAPEGAVGRSFL*
Ga0134127_1098517133300010399Terrestrial SoilANQDRDGVWAMVGLPDQPTGEVSGLNLVDVGPSILSMYGIEAPEGAVGRSFL*
Ga0134122_1204574423300010400Terrestrial SoilYARKLGLTGLAGQRMGTVEGLRLVDVGPTILDLYGVEPPAGVVGRSIL*
Ga0137374_1101231413300012204Vadose Zone SoilDQPTGKVDGLRLVDVGPSILSLFGVEAEAGPTGRSFL*
Ga0137380_1053791133300012206Vadose Zone SoilFVMAGVPGQPTGRREGLSLVDVGPSILSLYDIDPPEGAVGRSFL*
Ga0137378_1043395433300012210Vadose Zone SoilANHDRTGVFVMAGLHGQPTGPREGMRLVDVGPSILSLYGIEAPEGAEGKSFL*
Ga0137378_1146110913300012210Vadose Zone SoilDGANHDRTGVFVMSGAPSQPSGPVEGLNLVDVGPTILSMYGIDAPEGAVGRNFL*
Ga0137377_1159025923300012211Vadose Zone SoilPTGRREGLGILDVGPSILKLYGIDPPEDAVGRSFL*
Ga0137387_1109189713300012349Vadose Zone SoilLPGQRTGRVEGLSLVDVGPSILSIYGIPAPEGAVGRSFL*
Ga0134023_108918113300012385Grasslands SoilTGPDGANHDRDGDFIMNGAPRQPTGKIEGLRLVDVGPTILSLYDIDASRALPRL*
Ga0134052_132620623300012393Grasslands SoilPDGANHDRTGVFVMAGLPGQRTGKVEGLSLVDVGPSILSLYGIDAPEGAVGRSFLS*
Ga0134061_106069913300012399Grasslands SoilGIFVMAGVPAQPTGRFDGLNLVDVGPTILSLYDLDAPEGAVGRSFL*
Ga0134024_135401323300012404Grasslands SoilANHDRDGILIMSGAPGQATGKTEGLRLVDVGPTILSLYDIDASTALPGAVGRSFLG*
Ga0134050_100204813300012407Grasslands SoilANHDRTGVFALSNLPGQPVGTVDGLNLVDVGPTILSIYDIEAPESAVGRSFL*
Ga0134045_100490013300012409Grasslands SoilNHDRTGVFVMAGVPGQPTGRREGLSLVDVGPSILSLYGVDPPEGAVGRSFL*
Ga0136612_1005578213300012680Polar Desert SandGANHDRTAFFSMVNLPGQAMGRVEGMNLVDVGPSVLSLYDIEAPVGAAGRSFLK*
Ga0157301_1043328413300012911SoilGPDGANNDRDGVFIMKGLPGQRAGKVDGMQLVDVGPTILDIYGIDSTEALPTAVGRSFLQ
Ga0164298_1143859023300012955SoilSGKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ*
Ga0164303_1022587233300012957SoilDGVFIMKGLPGQSVGKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ*
Ga0164299_1048188023300012958SoilGANHDRDGVFIMKGLSGQATGKVEGLKLVDVGPSILSIYNIDATEALPTAVGRSFLQ*
Ga0164299_1108514723300012958SoilEQTSGKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ*
Ga0164306_1118437223300012988SoilANHDRDGVFIMKGLPGQSVGKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ*
Ga0120158_1037754123300013772PermafrostMMNLPGQPLGRVEGMNLVDVGPTILKLYDIEAPEGVVGRSFL*
Ga0075314_106567723300014265Natural And Restored WetlandsMRGLPGQATGKVEGLRLVDSGPSILSIYGIEASEALPGAVGRSFL*
Ga0075327_120915013300014272Natural And Restored WetlandsTGEVTGLNLVDVGPSILSVYGIDPQTALPGAVGRSFLQ*
Ga0075351_105469023300014318Natural And Restored WetlandsMMNLPGQPMGRVEGMNLVDVGPTILKLYGIEAPVGAVGRSFL*
Ga0157380_1110825823300014326Switchgrass RhizosphereLPGQKDGQVDGLRLIDVGPSIMKLYGIETPEGAFGRSFL*
Ga0157380_1224558223300014326Switchgrass RhizosphereFIVKNAPGQPMGEVSGWNLVDVGPTILSLYGIDATLEGAVGRSFL*
Ga0134085_1004338613300015359Grasslands SoilHDRTGVFVMAGVPGQPTGRREGLSLVDVGPSILSLYDIDPPEGAVGRSFLA*
Ga0132258_1059260913300015371Arabidopsis RhizosphereDGADHDRDGVFIMSGAPGQPAGKVDGLRLVDVGPTILSLYDIEASTALPGAAGRSFLA*
Ga0132258_1157389813300015371Arabidopsis RhizosphereGQPMGRVDGMNLVDVGPTILKLYDIEAPEGVVGRSFL*
Ga0132255_10620111913300015374Arabidopsis RhizosphereNHDRDGVFILKGLPGQMSGKVDRLKLVDVGPSILSLYGIEAPAGAVGRSFLQ*
Ga0187779_1123747513300017959Tropical PeatlandVFVMAGVPGQATGRREGLSLVDVGPSILSLYEIDPPEGAVGRSFL
Ga0190266_1018523913300017965SoilDGANHDRDGIFIVKNAPGQPMGEVSGWNLVDVGPTILSLYGIDATLEGAVGRSFL
Ga0187776_1085292923300017966Tropical PeatlandPGQPTGEKQGMKLVDVGPTILKLYGADELEGAVGRSFL
Ga0187777_1003432143300017974Tropical PeatlandAPGQATGRREGLSLVDVGPSILSLYEIDPPEGAVGRSFL
Ga0184605_1000089113300018027Groundwater SedimentIGPDGANHDRTGVFAMKGAPGQPTGNVEGLKLVDVGPTIASLFGIDALHGDASRSFL
Ga0187788_1027909813300018032Tropical PeatlandGANHDRDGVFVMAGLPGQPTGKVEGLRLVDVGPTILQLYGAEPMENAVGASFL
Ga0184621_1013555423300018054Groundwater SedimentGPDGANHDRNGVWAMAGLPGQSTGEVTGLNLVDVGPSILSMYGIDAPEGAVGRSFL
Ga0184623_1045362023300018056Groundwater SedimentAGVWAMSGLPGQATGEVTGLNLVDVGPYILSIYGIDAPEGVVGRSFL
Ga0184625_1009225333300018081Groundwater SedimentGMPGQTTGEVTGLNLVDVGPSILSLYGLQAPEGAVGRSFL
Ga0187774_1007513513300018089Tropical PeatlandTGVFAMRGLPGQPMGRVEGLNLIDVGPTILHLYDIPAPEGAVGRSFL
Ga0187774_1142999513300018089Tropical PeatlandGPDGANHDRTGIFVMTGLPGQPTGRVEGLNLIDVGPTIMKLYDIETPERAVGRSFL
Ga0190272_1171796123300018429SoilANHDRNGVWAMSGLPGQATGEVTGLGLVDVGPSILSMYGIDAPEGVVGRSFL
Ga0190272_1208951113300018429SoilGQPTGETAGMHLVDVGPTILKLYDAEPLAGAVGRSFL
Ga0066655_1017872233300018431Grasslands SoilDRTGIFVMAGVPAQPTGRFDGLNLVDVGPTILSLYDLDAPEGAVGRSFL
Ga0190269_1025272013300018465SoilDRDGVWAMAGLPGQATGEVTGLNLVDVGPSILSLYGIDAPEGAVGRSFL
Ga0190268_1086860513300018466SoilLPGQTMGRVEGMSLVDVGPSVLSLYDIEAPQGAVGRSFLK
Ga0190271_1066621413300018481SoilQQMGRVDGMNLVDVGPSILSLYDIEAPAGAAGRSFLT
Ga0190271_1340061913300018481SoilGANHDRTGVFAMKGAPGQPNGKVEGLSLVDVGPTILSLYGVEPSEGPSRSFL
Ga0190271_1357734813300018481SoilHDRTAFFSLVNLPGQTMGRVEGMSLVDVGPSVLSLYDIEAPQGAVGRSFLQ
Ga0066669_1072042923300018482Grasslands SoilDGANHDRTGVFVMSGASGQPSGRVEGLRLIDVGPSILSLYGIDPPDGAQGRSFLS
Ga0196964_1052788013300020202SoilGPDGANHDRKGVFAMSGLPGQPTGEQKDLSLVDVGPTIMQLYGGTVPEGAAGRSFL
Ga0210380_1030957323300021082Groundwater SedimentPGQATGQVTGLNLVDVGPSILSLYDIDAPEGAVGRSFL
Ga0210380_1038602923300021082Groundwater SedimentIFIMKGLEGQRTGKVDGLNLVDVGPSILSIYGIEAPQGAVGRSFLS
Ga0222621_111124413300021510Groundwater SedimentAGLPGQATGEVAGLSLVDVGPSILSLYGIDAPEGAVGRSFL
Ga0224510_1000778663300022309SedimentSMVNLPGQPMGRVEGMNLVDVGPSVLSLYDIEAPAGAVGRSFLK
Ga0222623_1009843213300022694Groundwater SedimentPTGNVEGLNLVDVGPTILSMFGIGAPEGETSRSFL
Ga0222623_1036799013300022694Groundwater SedimentGANHDRNGVFALAGLPGQPTGEVGALDLVDVGPSILSLYGLELGEDAVGRSFL
Ga0209172_1008539113300025310Hot Spring SedimentDGANHDRAGVWAMAGVPGQETGEVEGLNLVDVGPSILSLYGIEAPEGAVGRSFL
Ga0209640_1068372413300025324SoilGPDGANHDRAGIFSMAGLPGQRTGPVAGLNLVDVGPSILSLYGIEAPEGAVGRSFL
Ga0210094_107698323300025549Natural And Restored WetlandsGQQTGPVDGLRLIDVGPSILDIYGIDSTEALPTAVGRSFLQ
Ga0207653_1000151913300025885Corn, Switchgrass And Miscanthus RhizosphereMAGLPGQATGQITGLNLVDVGPSILSLYDIDAPEGAVGRSFL
Ga0207642_1031812233300025899Miscanthus RhizospherePGQKDGQVDGLRLIDVGPSIMKLYGIETPEGASGRSFL
Ga0207710_1016946913300025900Switchgrass RhizosphereTSGKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ
Ga0207646_1038764333300025922Corn, Switchgrass And Miscanthus RhizosphereQRTGRVEGLNLVDVGPSILSLYGAAELEGAVGRSFL
Ga0207706_1126243123300025933Corn RhizosphereANHDRDGIFIMAGAPGQPTGKVEGLRLVDVGPTILSLYDIEASTALPGAAGRSFLP
Ga0207706_1162030613300025933Corn RhizosphereDGANHDRNGVWAMAGLPGQSTGEVTGLNLVDVGPSILSMYGIEAPEGAVGRSFL
Ga0207686_1122140223300025934Miscanthus RhizosphereVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ
Ga0207670_1071382313300025936Switchgrass RhizosphereKVDGLKLVDVGPSILSIYGIDATEALPTAVGRSFLQ
Ga0207665_1086639423300025939Corn, Switchgrass And Miscanthus RhizosphereVFALAGAPGQPTGRVEGLRLIDVGPSILSLYGLEAPDGAQGRSFLA
Ga0209896_101176013300027006Groundwater SandGPDGANHDRTGVFALSNLPGQPMGSVEGLNLVDVGPSILSIYDIEVPEGAVGRSFL
Ga0209896_101223513300027006Groundwater SandANHDRNGVWAMAGLTGQATGEVTGLNLVDVGPSILWMYGIDAPEGAVGRSFL
Ga0209843_105095723300027511Groundwater SandSNLPGQPVGSVEGLNLVDVGPSILSIYDIEAPEGAVGRSFL
Ga0209887_109581023300027561Groundwater SandDGANHDRNGVWAMAGLPGQATGEVTGLNLVDVGPSILSMYGIDAPEGAVGRSFL
Ga0209177_1020959313300027775Agricultural SoilRTGVFVMAGVPGQPTGRREGMSLVDVGPSILSLYGIDPPEGAVGRSFL
Ga0209023_1047732733300027870Freshwater And SedimentGLPGQKTGKIDGMNLVDVGPSILDIYGIDSTEALPTAVGRSFLQ
Ga0209889_100251363300027952Groundwater SandVWAMAGLPGQATGEVTGLSLVDVGPSILSLYGIEAPEGAVGRSFL
(restricted) Ga0233417_1002807233300028043SedimentNLPGQQTGRVEGMNLVDVGPSILSLYDVEAPAGAVGRSFLT
(restricted) Ga0233417_1033111313300028043SedimentDTGPDGANHDRTGVFAMAGLPSQATGEVKGMNLVDVGPSILSLYGIEAPEGAVGRSFL
Ga0268265_1082104813300028380Switchgrass RhizosphereTGPDGANHDRTGIFAMKNLPGQPTGRVDGMNLVDVGPTILKLYDIEAPEGVVGRSFL
Ga0307291_115025413300028707SoilQTTGEVTGLNLVDVGPSILSLYGIEAPEGAVGRSFL
Ga0307309_1017925913300028714SoilNAPGQPMGEVSGWNLVDVGPTILSLYGIDATLEGAVGRSFL
Ga0307301_1002038713300028719SoilGQKTGEVTGLDLVDVGPSILSMYGIDAPEGAVGRSFL
Ga0307317_1016458513300028720SoilPMGEVSGWNLVDVGPTILSLYGIDATLEGAVGRSFL
Ga0307320_1028668613300028771SoilANHDRDGIFIVKNAPGQPMGEVSGWNLVDVGPTILSLYGIDGSLEGAVGRSFL
Ga0307320_1038140123300028771SoilDGIFAMTGLEGQPTGRVEGLSLVDVGPTILKLYGLDAPDGAVGRSFL
Ga0307282_1018935423300028784SoilGAPHQPSGRVEGLSLVDVGPTILSIYDIAAPEGAVGRSFL
Ga0307299_1002372313300028793SoilANHDRTGVFAMKGAPGQPTGNVEGLKLVDVGPTIASLFGIDALHGDASRSFL
Ga0307299_1017106613300028793SoilTGKVDGMQLVDVGPTILDIYGIDSTEALPTAVGRSFLQ
Ga0307503_1071865823300028802SoilPGQPMGQLTGMNLVDVGPTILKLYDIEAPAGVVGRSFL
Ga0307305_1014458613300028807SoilNHDRNGVWAMAGLPGQSTGEVTGLNLVDVGPSILSMYGIDAPEGAVGRSFL
Ga0307312_1050557313300028828SoilPDGANHDRDGVFIMKGLSGQATGKVDGLRLVDVGPSILSIYGIDATEALPTAVGRSFLQ
Ga0307312_1090589623300028828SoilPDGANHDRTGVFAMVGAPGQPSGRREGLQLIDVGPSLLSLYGLEAPEGAQGRSFL
Ga0307277_1011271133300028881SoilVFALANLPGQRMGRVDGLNLVDVGPSILSLYGIPAPEGAVGRSFLS
Ga0307304_1029100023300028885SoilVMNGLPGQRTGMVEGMNLVDVGPTILSLYDIEAPAGAVGRSFL
Ga0307304_1062423723300028885SoilRTGVFAMANLPGQRTGRVEGLSLVDVGPSILSIYGIPAPEGAVGRSFLS
Ga0299907_1018878143300030006SoilIGPDGANHDRTGIFAMKGAPGQPNGKVDGLSLVDVGPTILSLYGAEPTGTEAPPRSFL
Ga0302299_1061689823300030010FenTGPDGANHDRTGVFAMAGLPGQRMGRVEGMSLVDVGPSILSLYGIPAPEGAVGRSFLS
Ga0268241_1006607113300030511SoilTGPDGANHDRTGVFALTNLPGQRTGEVDGLRLVDVGPSILSLYDIETPQGAIGRSFL
Ga0299906_1090538513300030606SoilAGLPGQRTGELRDLNLVDVGPSILSLYDIEAPEGAVGRSFL
Ga0302046_1126590623300030620SoilGPDGANHDRTGVFAMAGLPGQMTGETKGMNLVDVGPSILSLYDLEAPEDAEGKSFL
Ga0308178_103458713300030990SoilPDGANHDRDGIFIMSGAPGQPTGKVEGLRLVDVGPSILSLYDIEASTALPGAAGRSFLE
Ga0308187_1010179623300031114SoilANHDREGIFIMNGAPGQPTGKVEGLRLVDVGPTILSLYDIEASTALPGAAGRSFLA
Ga0307495_1003237633300031199SoilQPMGQVTGMNLVDVGPTILKLYDLEAPEGAVGRSFL
Ga0299913_1073938633300031229SoilVFAMAGLPGQRTGELRDLNLVDVGPSILSLYDIEAPEGAVGRSFL
Ga0308194_1014207413300031421SoilGLAGQPMGKVDGLNLIDVGPTILKIYGTAAPEGAVGRSFL
Ga0310886_1076816123300031562SoilANHDRSGVFAMAGLPGQATGEVSDLNLVDVGPSILSLYDLEAPEGAVGRSFL
Ga0315290_1064173423300031834SedimentHDRDGIFIMKGLDGQRTGKVDGLNPVDVGPSILSIYGIEAPHGAVGRSFLS
Ga0315297_1168768813300031873SedimentMKGLDGQRTGKVDGLNLVDVGPSILSIYGIEAPHGAVGRSFLS
Ga0310891_1025014523300031913SoilGANHDRNGVWAMAGLPGQATGQIAGLNLVDVGPSILSLYDIDAPEGAVGRSFL
Ga0214473_1085152213300031949SoilHDRTGVFAMAGLPGQPTGEQAGLNLVDVGPTLMKLYGFEVPEGAVGRSFL
Ga0310897_1011339533300032003SoilGQRPGRVEGLNLVDVGPSILSIYGIEAPQGAVGRSFLS
Ga0310906_1042179013300032013SoilGVFIMKGLPGQRTGKVDGMQLVDVGPTILDIYGIDSTEALPTAVGRSFLQ
Ga0315272_1066540523300032018SedimentRTAFFSMMNLPGQTMGKVDGMNLVDVGPTIIKMYGIEALEGAVGRSFL
Ga0315277_1103191023300032118SedimentGKVDGMNLVDVGPTILDIYGIDSTEALPTAVGRSFLQ
Ga0315286_1188169723300032342SedimentTGTDGANHDRTAFFSMMNLPGQPTGKVDGMSLVDVGPSILSLYGIEAPTGAVGRSFLQ
Ga0335082_1020858013300032782SoilGLPGQRTGRREGLSLVDVGPSILSLYDVDPPEGAVGRSFL
Ga0316616_10322471413300033521SoilLPGQSTGEVKGLNLIDVGPSILKLYDIEAPEGAVGRSFL
Ga0247829_1090929713300033550SoilMGEVSGWNLVDVGPTILSLYGIDATLEGAVGRSFL
Ga0364928_0140270_410_5863300033813SedimentDTGPDGANHDRTGVFALSNLPGLPLGPVEGLNLVDVGPSILSLYDIEAPEGAVGRSFL
Ga0364935_0237786_445_5733300034151SedimentMAGLPGQPTGEVTGLNLVDVGPSILSLYGLQAPEGAVGRSFL
Ga0364940_0055967_926_10693300034164SedimentTGVFALSNLPGQPLGPVDGLNLVDVGPTILSLYDIEAPEGAVGRSFL
Ga0314788_040221_2_1183300034666SoilPGQATGQITGLNLVDVGPSILSLYGIEAPEGAVGRSFL
Ga0314788_142568_25_1533300034666SoilMKNLPGQPTGRVDGMNLVDVGPTILKLYDIEAPEGVVGRSFL


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