NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F036222

Metagenome / Metatranscriptome Family F036222

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F036222
Family Type Metagenome / Metatranscriptome
Number of Sequences 170
Average Sequence Length 61 residues
Representative Sequence MSTDRYRAPTEPDEDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Number of Associated Samples 150
Number of Associated Scaffolds 170

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.76 %
% of genes near scaffold ends (potentially truncated) 28.24 %
% of genes from short scaffolds (< 2000 bps) 82.35 %
Associated GOLD sequencing projects 141
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (88.824 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.882 % of family members)
Environment Ontology (ENVO) Unclassified
(38.824 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(37.059 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.68%    β-sheet: 0.00%    Coil/Unstructured: 81.32%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 170 Family Scaffolds
PF00196GerE 41.18
PF00692dUTPase 28.82
PF00591Glycos_transf_3 8.82
PF06559DCD 5.88
PF02518HATPase_c 3.53
PF07730HisKA_3 2.35
PF02754CCG 2.35
PF02885Glycos_trans_3N 1.18
PF01025GrpE 0.59
PF00011HSP20 0.59
PF13302Acetyltransf_3 0.59
PF01556DnaJ_C 0.59
PF12680SnoaL_2 0.59
PF13183Fer4_8 0.59

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 170 Family Scaffolds
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 34.71
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 28.82
COG2048Heterodisulfide reductase, subunit BEnergy production and conversion [C] 2.35
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 2.35
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 2.35
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 2.35
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 2.35
COG0247Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcFEnergy production and conversion [C] 2.35
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.59
COG0484DnaJ-class molecular chaperone with C-terminal Zn finger domainPosttranslational modification, protein turnover, chaperones [O] 0.59
COG0576Molecular chaperone GrpE (heat shock protein HSP-70)Posttranslational modification, protein turnover, chaperones [O] 0.59


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.82 %
UnclassifiedrootN/A11.18 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725001|GPWNP_F5MPXY301EEOSSAll Organisms → cellular organisms → Bacteria520Open in IMG/M
2070309009|GPKNP_GG3DY5401BCJVOAll Organisms → cellular organisms → Bacteria500Open in IMG/M
2088090015|GPICI_8743138All Organisms → cellular organisms → Bacteria1765Open in IMG/M
2124908045|KansclcFeb2_ConsensusfromContig99485All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300000443|F12B_10243928All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300000550|F24TB_11108857All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300000559|F14TC_100578788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1172Open in IMG/M
3300000890|JGI11643J12802_10740974Not Available714Open in IMG/M
3300000953|JGI11615J12901_10082569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales963Open in IMG/M
3300004114|Ga0062593_101133499All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300004114|Ga0062593_102751612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300004156|Ga0062589_101176099Not Available732Open in IMG/M
3300004479|Ga0062595_102009687All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300004480|Ga0062592_100875974All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300004480|Ga0062592_101223665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium704Open in IMG/M
3300004643|Ga0062591_102216476Not Available572Open in IMG/M
3300005105|Ga0066812_1000830All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1285Open in IMG/M
3300005161|Ga0066807_1018241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300005294|Ga0065705_10054254All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300005329|Ga0070683_100065660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3379Open in IMG/M
3300005331|Ga0070670_100208819All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300005345|Ga0070692_10019384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3282Open in IMG/M
3300005354|Ga0070675_100559768All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300005354|Ga0070675_101100746Not Available730Open in IMG/M
3300005406|Ga0070703_10007302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3101Open in IMG/M
3300005440|Ga0070705_100634233Not Available831Open in IMG/M
3300005444|Ga0070694_100058268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2627Open in IMG/M
3300005445|Ga0070708_101348587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium666Open in IMG/M
3300005459|Ga0068867_100262268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1409Open in IMG/M
3300005471|Ga0070698_101397949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium651Open in IMG/M
3300005518|Ga0070699_101407007Not Available640Open in IMG/M
3300005545|Ga0070695_101117171Not Available646Open in IMG/M
3300005577|Ga0068857_100783532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium910Open in IMG/M
3300005617|Ga0068859_102331672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium590Open in IMG/M
3300005719|Ga0068861_100508094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1091Open in IMG/M
3300005842|Ga0068858_100531074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1138Open in IMG/M
3300005843|Ga0068860_101613353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium671Open in IMG/M
3300005937|Ga0081455_10015118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7512Open in IMG/M
3300006049|Ga0075417_10017153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2829Open in IMG/M
3300006577|Ga0074050_10010137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium829Open in IMG/M
3300006580|Ga0074049_13093211Not Available646Open in IMG/M
3300006580|Ga0074049_13178965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1079Open in IMG/M
3300006581|Ga0074048_10031096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria526Open in IMG/M
3300006581|Ga0074048_10036149All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300006581|Ga0074048_10085395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1384Open in IMG/M
3300006847|Ga0075431_102165180All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300009094|Ga0111539_13535331All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300009156|Ga0111538_10024741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7828Open in IMG/M
3300009157|Ga0105092_10043595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2398Open in IMG/M
3300009551|Ga0105238_12911381All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300009553|Ga0105249_11108021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium862Open in IMG/M
3300009553|Ga0105249_11189049Not Available833Open in IMG/M
3300009609|Ga0105347_1393547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300009789|Ga0126307_10004672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9514Open in IMG/M
3300009801|Ga0105056_1020833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium805Open in IMG/M
3300009816|Ga0105076_1047118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria778Open in IMG/M
3300009820|Ga0105085_1060114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300009823|Ga0105078_1005798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1233Open in IMG/M
3300009823|Ga0105078_1007129Not Available1142Open in IMG/M
3300009837|Ga0105058_1056235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium886Open in IMG/M
3300010038|Ga0126315_10446759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria818Open in IMG/M
3300010166|Ga0126306_10031168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3604Open in IMG/M
3300010400|Ga0134122_10073016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2669Open in IMG/M
3300010999|Ga0138505_100005209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1339Open in IMG/M
3300011000|Ga0138513_100003066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1717Open in IMG/M
3300011119|Ga0105246_10021764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4129Open in IMG/M
3300011119|Ga0105246_12602004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300011412|Ga0137424_1005520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1478Open in IMG/M
3300011440|Ga0137433_1039526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1390Open in IMG/M
3300011444|Ga0137463_1212991All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300012204|Ga0137374_10282837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1371Open in IMG/M
3300012355|Ga0137369_10239458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1378Open in IMG/M
3300012355|Ga0137369_11011111Not Available550Open in IMG/M
3300012358|Ga0137368_10135967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1837Open in IMG/M
3300012358|Ga0137368_10622393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium684Open in IMG/M
3300012360|Ga0137375_10262394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1587Open in IMG/M
3300012532|Ga0137373_10016163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7570Open in IMG/M
3300012938|Ga0162651_100000622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2674Open in IMG/M
3300012938|Ga0162651_100005204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1412Open in IMG/M
3300013306|Ga0163162_11536992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium758Open in IMG/M
3300013754|Ga0120183_1004597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium786Open in IMG/M
3300014745|Ga0157377_10441613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium896Open in IMG/M
3300015371|Ga0132258_11288615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1847Open in IMG/M
3300015372|Ga0132256_101317117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium835Open in IMG/M
3300017792|Ga0163161_11598887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium575Open in IMG/M
3300017965|Ga0190266_10080631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1272Open in IMG/M
3300017997|Ga0184610_1000984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium6390Open in IMG/M
3300018051|Ga0184620_10003519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3129Open in IMG/M
3300018052|Ga0184638_1013053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2852Open in IMG/M
3300018054|Ga0184621_10017319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2171Open in IMG/M
3300018054|Ga0184621_10134946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria886Open in IMG/M
3300018056|Ga0184623_10292395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium738Open in IMG/M
3300018067|Ga0184611_1045460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1452Open in IMG/M
3300018072|Ga0184635_10012436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3002Open in IMG/M
3300018075|Ga0184632_10079042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1435Open in IMG/M
3300018081|Ga0184625_10051538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2059Open in IMG/M
3300018081|Ga0184625_10528166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300018465|Ga0190269_10125879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1291Open in IMG/M
3300018469|Ga0190270_10091276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2299Open in IMG/M
3300018469|Ga0190270_10755130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria973Open in IMG/M
3300019767|Ga0190267_10189339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria950Open in IMG/M
3300019767|Ga0190267_10783328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium631Open in IMG/M
3300020005|Ga0193697_1077088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria814Open in IMG/M
3300020016|Ga0193696_1178673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300021080|Ga0210382_10058423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1535Open in IMG/M
3300021081|Ga0210379_10192907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium876Open in IMG/M
3300021082|Ga0210380_10587406All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300025735|Ga0207713_1140036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria791Open in IMG/M
3300025904|Ga0207647_10014728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5384Open in IMG/M
3300025917|Ga0207660_10847126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium746Open in IMG/M
3300025920|Ga0207649_10054897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2481Open in IMG/M
3300025925|Ga0207650_10312955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1285Open in IMG/M
3300025926|Ga0207659_10119492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2018Open in IMG/M
3300025926|Ga0207659_11359886Not Available609Open in IMG/M
3300025932|Ga0207690_10588831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium907Open in IMG/M
3300025935|Ga0207709_10015221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4263Open in IMG/M
3300025937|Ga0207669_11109676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria668Open in IMG/M
3300025961|Ga0207712_11267241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium658Open in IMG/M
3300025972|Ga0207668_10274474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1380Open in IMG/M
3300026067|Ga0207678_10414314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1168Open in IMG/M
3300026118|Ga0207675_100186050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1991Open in IMG/M
3300026878|Ga0208891_1000376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1191Open in IMG/M
3300027006|Ga0209896_1010193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1010Open in IMG/M
3300027018|Ga0208475_1014540Not Available769Open in IMG/M
3300027332|Ga0209861_1020390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium988Open in IMG/M
3300027490|Ga0209899_1032767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1123Open in IMG/M
3300027873|Ga0209814_10000040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria34424Open in IMG/M
3300027876|Ga0209974_10434359Not Available519Open in IMG/M
3300027952|Ga0209889_1048114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium896Open in IMG/M
3300028587|Ga0247828_10356060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium828Open in IMG/M
3300028589|Ga0247818_10807175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium655Open in IMG/M
3300028592|Ga0247822_10376287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1102Open in IMG/M
3300028596|Ga0247821_10815732Not Available616Open in IMG/M
3300028597|Ga0247820_10948157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300028608|Ga0247819_10656438All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300028719|Ga0307301_10064724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1136Open in IMG/M
3300028744|Ga0307318_10222773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium654Open in IMG/M
3300028744|Ga0307318_10240570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium629Open in IMG/M
3300028771|Ga0307320_10141664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium927Open in IMG/M
3300028784|Ga0307282_10321071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium747Open in IMG/M
3300028787|Ga0307323_10127889Not Available915Open in IMG/M
3300028791|Ga0307290_10035291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1783Open in IMG/M
3300028793|Ga0307299_10001851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7171Open in IMG/M
3300028807|Ga0307305_10033027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2368Open in IMG/M
3300028809|Ga0247824_11029769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300028812|Ga0247825_10640681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium763Open in IMG/M
3300028812|Ga0247825_10841715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria663Open in IMG/M
3300028828|Ga0307312_10306767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1034Open in IMG/M
3300028875|Ga0307289_10034586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1998Open in IMG/M
3300028875|Ga0307289_10324567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium633Open in IMG/M
3300028878|Ga0307278_10008914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4727Open in IMG/M
3300028885|Ga0307304_10245197All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300031114|Ga0308187_10245673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium648Open in IMG/M
3300031198|Ga0307500_10060159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium940Open in IMG/M
3300031199|Ga0307495_10011769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1305Open in IMG/M
3300031200|Ga0307496_10070352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300031226|Ga0307497_10650437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300031547|Ga0310887_10076130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1593Open in IMG/M
3300031720|Ga0307469_11452757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium655Open in IMG/M
3300031852|Ga0307410_10370522Not Available1150Open in IMG/M
3300031854|Ga0310904_10183852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1246Open in IMG/M
3300031913|Ga0310891_10035731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1331Open in IMG/M
3300032004|Ga0307414_10782525Not Available869Open in IMG/M
3300032174|Ga0307470_10520719All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300032179|Ga0310889_10028747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2020Open in IMG/M
3300032180|Ga0307471_101492725Not Available834Open in IMG/M
3300032205|Ga0307472_100619543All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria959Open in IMG/M
3300033550|Ga0247829_11728446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300034115|Ga0364945_0268971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300034668|Ga0314793_117690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.82%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.47%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.29%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.53%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.94%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.35%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.35%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.35%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil2.35%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.35%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.76%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.76%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.76%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.18%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.18%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.18%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.59%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.59%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.59%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.59%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.59%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.59%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.59%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.59%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.59%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725001Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
2070309009Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
2088090015Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005105Soil and rhizosphere microbial communities from Laval, Canada - mgHPCEnvironmentalOpen in IMG/M
3300005161Soil and rhizosphere microbial communities from Laval, Canada - mgLPAEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009801Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300009820Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011000Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011412Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013754Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep2EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026878Soil and rhizosphere microbial communities from Laval, Canada - mgHPC (SPAdes)EnvironmentalOpen in IMG/M
3300027006Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027018Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)EnvironmentalOpen in IMG/M
3300027332Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027490Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027952Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPWNP_026092202067725001SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAR
GPKNP_101217302070309009SoilGRRAMSTDRYRTPKEPDQDAYEDAWYRALKAKATRRSGEPKDDTTDAPPAQAFPPAPTQNEGDAGAR
GPICI_022979302088090015SoilMPTDRDRAPTEPDKDAYEDAWYRALKAKAARRFAEPKDDTTDAPPAPVLPPAPTQNEGDARAR
KansclcFeb2_072807702124908045SoilMSTDRYRTPKEPDQDAYEDAWYRALKAKATRRSGEPKDDTTDAPPAQAFPPAPTQNEGDAGAR
F12B_1024392823300000443SoilMSTDRYRAPTVPEKDAYEEAWYRALKAKASRRFADSKDDTIDVPPALVFPQAPTQNEGDAGAR*
F24TB_1110885723300000550SoilMPTERYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDDAGSR*
F14TC_10057878823300000559SoilMPTERYRPPPEPDEDAYEDAWYRALKAKASNXXXXXXXXXXXXXXXXSPSAPDRTEDDAGSR*
JGI11643J12802_1074097413300000890SoilDEDAYEDAWYRALKAKSSKRSTDPKGGRTDAPPAPELPPAPDQHEGDAGAR*
JGI11615J12901_1008256933300000953SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKKSADPKDDRTDLPPAPELPPAPDQHEGNARGR*
Ga0062593_10113349923300004114SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRHEGDAGSR*
Ga0062593_10275161223300004114SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAR*
Ga0062589_10117609913300004156SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAS*
Ga0062595_10200968723300004479SoilMPTDRDRAPTEPDKDAYEDAWYRALKAKAARRFAEPKDDTTDAPPAPVLPPAPTQNEGDARAR*
Ga0062592_10087597423300004480SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKSSRRSADPKDDTTDAPPAPVLPPAPTQNEGDTRAR*
Ga0062592_10122366523300004480SoilMPTERYRPLPGPDENAYEDAWYRALKAKASNSFADRKDDTTDAPPGTSPSAPDRTEDEAGSR*
Ga0062591_10221647613300004643SoilTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRHEGDAGSR
Ga0066812_100083013300005105SoilMSTDRYRAPTEPDQDAYEDAWYRALKAKASRRSADPKDDTTDDPQAPVSSSPPAQNEGDAGAR*
Ga0066807_101824123300005161SoilMSTDRYRAPTEPDQDAYEDAWYRALKAKASRRSADPKDDTTDDPQAPVSSSPPAQNEGDAGA
Ga0065705_1005425413300005294Switchgrass RhizosphereMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPRGTSPSAPDRTEDDAGSR*
Ga0070683_10006566043300005329Corn RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDEAGSR*
Ga0070670_10020881923300005331Switchgrass RhizosphereMSSDRDRAPTEPDKDAYEDAWYRALKAKASRRFANPKDDTTDAPPAPVLPPAPTQNDGDTRAR*
Ga0070692_1001938453300005345Corn, Switchgrass And Miscanthus RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR*
Ga0070675_10055976823300005354Miscanthus RhizosphereMPTDRDRAPTEPDKDAYEDAWYRALKAKAARRFADPKDDTTDAPPAPVLPPAPTQNEGDTRAR*
Ga0070675_10110074623300005354Miscanthus RhizosphereTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDTTDAPPAPELPPAPDQHEGDAGAR*
Ga0070703_1000730253300005406Corn, Switchgrass And Miscanthus RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDDAGSR*
Ga0070705_10063423313300005440Corn, Switchgrass And Miscanthus RhizosphereDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR*
Ga0070694_10005826823300005444Corn, Switchgrass And Miscanthus RhizosphereMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFANPKGDTTDAPPAPVLPPAPTQNEGDTRAR*
Ga0070708_10134858723300005445Corn, Switchgrass And Miscanthus RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRAEDDAGSR*
Ga0068867_10026226813300005459Miscanthus RhizosphereTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR*
Ga0070698_10139794913300005471Corn, Switchgrass And Miscanthus RhizosphereMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFANPKDDTTDAPPAPVLPPAPTQNEGDTRAR*
Ga0070699_10140700713300005518Corn, Switchgrass And Miscanthus RhizosphereMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR*
Ga0070695_10111717113300005545Corn, Switchgrass And Miscanthus RhizosphereMSTDRDRAPTEPDKDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR*
Ga0068857_10078353223300005577Corn RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDA
Ga0068859_10233167213300005617Switchgrass RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNSFADRKDDTTDAPPGTSPSAPDRTEDEA
Ga0068861_10050809423300005719Switchgrass RhizosphereMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDASPGTSHSTPERNEDDAGSGSR*
Ga0068858_10053107433300005842Switchgrass RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNSFADRKDDTTDAPPGTSPSAP
Ga0068860_10161335323300005843Switchgrass RhizosphereMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDASPGTSHSTP
Ga0081455_1001511873300005937Tabebuia Heterophylla RhizosphereMSTDRYKAPTDPDEESYEDAWYRALKAKSSKKSAPKDDRADLPPAPELPPAPDQHEGDARGR*
Ga0075417_1001715343300006049Populus RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKKSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR*
Ga0074050_1001013723300006577SoilMSTHQHRAPTESDEDAYEDAWYRALKAKAQRRSADPKDDTTDAPQAPSFPPPPVQNEGDAAAR*
Ga0074049_1309321113300006580SoilPTEPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPTPELPPAPDQHEGDARAR*
Ga0074049_1317896523300006580SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFAERKDDTTDAPPGTSPSAPDRNEDDADSR*
Ga0074048_1003109623300006581SoilMSTDRNRAPTKPDDDAYEDAWYRALKAKAQRRSADPKDDTTDAPQAPAFPPPPVQNEGDTGAR*
Ga0074048_1003614923300006581SoilMPTDRYRPPPEPEEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDDAGSH*
Ga0074048_1008539533300006581SoilMSTDRYRTPTEPDEDAYEDAWYRALKAKASLRSADPKDDTTDAPQAPVFPSPPAQNEGDAGAR*
Ga0075431_10216518023300006847Populus RhizosphereMSTDRDRAPTEPDKDAYEDAWYRALKAKSSRRFASPKDDTTDAPPAPVLPPAPTQNEGDARAR*
Ga0111539_1353533123300009094Populus RhizosphereRRGAMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKKSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR*
Ga0111538_1002474123300009156Populus RhizosphereMPTERYRPLREPDEDAYEDAWYRALKAKASNRFADRKDDTTDAQPGTSPSAPDRAEDDAGSR*
Ga0105092_1004359533300009157Freshwater SedimentMSTDRYKAPTEPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPSAPELPPAPDQHEDDARAR*
Ga0105238_1291138113300009551Corn RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDTRAR*
Ga0105249_1110802123300009553Switchgrass RhizosphereMSSDRDRAPTEPDKDAYEDAWYRALKAKASRRFANPKDDTTDAPPAPVLPPAPTQNEGDTRAR*
Ga0105249_1118904913300009553Switchgrass RhizosphereDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR
Ga0105347_139354723300009609SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADSKGDTTDAPPGTSPSAPDRNEDDAGSGAR*
Ga0126307_1000467283300009789Serpentine SoilMSTDRKRTPTKPDEDAYEDAWYRALKAKASRRSDRKHDTTNAPQAPVLPPAPTQNDGAGTR*
Ga0105056_102083323300009801Groundwater SandMPTDRYRAPKKPDQDAYEDAWYRALKAKATRRSGKPKDDTTDAPPAQAFPPAPTQNEGDAGAR*
Ga0105076_104711823300009816Groundwater SandMPTDRYRAPKKPDQDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAR*
Ga0105085_106011413300009820Groundwater SandMSTDRYRAPTEPDQDAYEDAWYRALKAKATRRSGKPKDDTTDAPPAQAFPPAPTQNEGDAGAR*
Ga0105078_100579833300009823Groundwater SandDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARTS*
Ga0105078_100712933300009823Groundwater SandMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPSAPELPPAPDQHEGDARAR*
Ga0105058_105623523300009837Groundwater SandMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDAR*
Ga0126315_1044675923300010038Serpentine SoilMSTDRKKAPTEPDEDAYEDAWYRALKAKASRRSDRKHDTTEAPPTVLPPAPTQNDGDGGAR*
Ga0126306_1003116833300010166Serpentine SoilMSTDRRKAPTEPDEDAYEDAWYRALKAKASRRSDRKHDTTNAPQAPVLPPAPTQNDGAGTR*
Ga0134122_1007301643300010400Terrestrial SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSTSDRNEDDAGPGSR*
Ga0138505_10000520923300010999SoilMPTDRDRAPEPDQDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR*
Ga0138513_10000306633300011000SoilMSTDRDRAPTEPEKDAYEDAWYRALKAKSSKRSTDPKDDRTDAPAAPELPPAPDQHEGDARAR*
Ga0105246_1002176413300011119Miscanthus RhizosphereTSGTFDGRTAMPTERYRPLPGPDENAYEDAWYRALKAKASNSFADRKDDTTDAPPGTSPSAPDRTEDEAGSR*
Ga0105246_1260200413300011119Miscanthus RhizosphereTSGTFDGRTAMPTERYRPLPGPDENAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDEAGSR*
Ga0137424_100552023300011412SoilMPTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADSKGDTTDAPPGTSPSAPDRNEDDAGSGAR*
Ga0137433_103952613300011440SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADSKGDTTDAPPGTSPSAPDRNEDDA
Ga0137463_121299123300011444SoilMSTGRYRPPPEPDEEAYEDAWYRALKAKASNRFADPKDDTSDAPPGTSPSAPDRNEDDAGSGSR*
Ga0137374_1028283733300012204Vadose Zone SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADPKDDTTDAPPASVLPPAPTQNEGDARAR*
Ga0137369_1023945813300012355Vadose Zone SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKASNRYADPKDDTTDAPQPPASPSTPAENDGDA
Ga0137369_1101111123300012355Vadose Zone SoilMSTDRTKPQTEPDQDAYEDAWYRALKAKASNRFADPKDDTTDAPQPPASPSTPAENDGDAAAR*
Ga0137368_1013596723300012358Vadose Zone SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADPKDDTTDAPAAPTFPPAPAQNEGDAGAR*
Ga0137368_1062239323300012358Vadose Zone SoilMSTDRYKAPTEPDQDAYEDAWYRALKAKATRRSGEPKDDTTDAPPAQAFPPAPTQNEGDAGAR*
Ga0137375_1026239433300012360Vadose Zone SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKATRRSGEPKDDTTDAPPASVLPPAPTQNEGDARAR*
Ga0137373_1001616333300012532Vadose Zone SoilMSTDRYRAPTEPDEDAYEDAWYRALKAKASRRFADPKDDTTDAPAAPTFPPAPAQNEGDVGAR*
Ga0162651_10000062223300012938SoilMSTDRDRAPTEPEKDAYEDAWYRALKAKASRPRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR*
Ga0162651_10000520413300012938SoilAWYRALKAKSSKRSTDPKDDRTNAPPAPELPPAPDQHEGDARAR*
Ga0163162_1153699223300013306Switchgrass RhizosphereEDAYEDAWYRALKAKASNRFADRKDDTTDASPGTSHSTPERNEDDAGSGSR*
Ga0120183_100459713300013754TerrestrialMSTDRKRSPTEPDEDAYEDAWYRALKAKASRRSDRKDDTTKAPRPPVLPPAPNQNDGDAGAR*
Ga0157377_1044161313300014745Miscanthus RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHK
Ga0132258_1128861533300015371Arabidopsis RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRADAPPAPELPPAPDQHEGDAGAR*
Ga0132256_10131711723300015372Arabidopsis RhizosphereMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRAEDDAGSR*
Ga0163161_1159888713300017792Switchgrass RhizospherePDEDAYEDAWYRALKAKASNRFADRKDDTTDASPGTSHSTPERNEDDAGSGSR
Ga0190266_1008063123300017965SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFANPKDDTTDAPPAPVLPPAPTQNEGDTRAR
Ga0184610_100098423300017997Groundwater SedimentMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADRKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0184620_1000351943300018051Groundwater SedimentMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRSANPKDDTTDAPPAPVLPPAPTQNDGDARAR
Ga0184638_101305333300018052Groundwater SedimentMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEDDARAR
Ga0184621_1001731933300018054Groundwater SedimentMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0184621_1013494623300018054Groundwater SedimentMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPGTSPSAPERNEDDAGSGSR
Ga0184623_1029239523300018056Groundwater SedimentMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEG
Ga0184611_104546023300018067Groundwater SedimentMPTERYRPAPEPDEDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0184635_1001243613300018072Groundwater SedimentMPTDRDRAPEPDKDAYEDAWYRALKAKASRRSANPKDDTTDAPPGTSPSAPDRTDDDAGS
Ga0184632_1007904233300018075Groundwater SedimentMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADQKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0184625_1005153813300018081Groundwater SedimentMPTDRYRAPKKPDQDAYEDAWYRALKAKATRRSGKPKDDTTDAPPAQAFPPAPTQNEGDAGAR
Ga0184625_1052816623300018081Groundwater SedimentMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRSADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0190269_1012587923300018465SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKSSRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0190270_1009127633300018469SoilMPTDRYRPPPEPDQDAYEDAWYRALKAKASNRFADRTDDTTDAPPGTSPSAPDRAEDDAGSH
Ga0190270_1075513033300018469SoilMPTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTDDDAGSR
Ga0190267_1018933913300019767SoilDKDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0190267_1078332813300019767SoilMSTDRDRAPEPDKDAYEDAWYRALKAKASRRFANPKDDTTDAPPAPVLPPAPTQNEGDTRAR
Ga0193697_107708823300020005SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTADGPPGTSPSAPDRNEDDAGSGSR
Ga0193696_117867323300020016SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTADASPGTSASTPDRNEDDAGSSR
Ga0210382_1005842313300021080Groundwater SedimentMSTGRYRPPPEPEEDAYEDAWYRALKAKASNRFADPKDDTSDAPPGTSPSAPERNEDDAGSGSR
Ga0210379_1019290723300021081Groundwater SedimentMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRNEDDAGSGSS
Ga0210380_1058740623300021082Groundwater SedimentMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKEDTTDAPSGTSPSAPDQSEDDAGSR
Ga0207713_114003623300025735Switchgrass RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDEAGSR
Ga0207647_1001472833300025904Corn RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDTTDAPPAPELPPAPDQHEGDAGAR
Ga0207660_1084712613300025917Corn RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNSFADRKDDTTDAPPGTSPSAPDR
Ga0207649_1005489733300025920Corn RhizosphereMPTERYRPLPGPDENAYEDAWYRALKAKASNSFADRKDDTTDAPPGTSPSAPDRTEDEAGSR
Ga0207650_1031295523300025925Switchgrass RhizosphereMSSDRDRAPTEPDKDAYEDAWYRALKAKASRRFANPKDDTTDAPPAPVLPPAPTQNDGDTRAR
Ga0207659_1011949233300025926Miscanthus RhizosphereMPTDRDRAPTEPDKDAYEDAWYRALKAKAARRFADPKDDTTDAPPAPVLPPAPTQNEGDTRAR
Ga0207659_1135988623300025926Miscanthus RhizosphereGAMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDTTDAPPAPELPPAPDQHEGDAGAR
Ga0207690_1058883123300025932Corn RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKASNRFAEPKDDTTDAPPGTSPSAPDRNEDDAGSR
Ga0207709_1001522143300025935Miscanthus RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR
Ga0207669_1110967623300025937Miscanthus RhizosphereMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRHEGDAGSR
Ga0207712_1126724113300025961Switchgrass RhizosphereSAARSDPGTSGTFDGRTAMPTERYRPLPGPDENAYEDAWYRALKAKASNSFADRKDDTTDAPPGTSPSAPDRTEDEAGSR
Ga0207668_1027447423300025972Switchgrass RhizosphereMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDASPGTSRSTPERNEGDAGSGSR
Ga0207678_1041431433300026067Corn RhizosphereTERYRPLPGPDENAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDEAGSR
Ga0207675_10018605023300026118Switchgrass RhizosphereMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDASPGTSHSTPERNEDDAGSGSR
Ga0208891_100037633300026878SoilMSTDRYRAPTEPDQDAYEDAWYRALKAKASRRSADPKDDTTDDPQAPVSSSPPAQNEGDAGAR
Ga0209896_101019323300027006Groundwater SandMSTDRDRAPEPDKDAYEDAWYRALKAKSSRRFADPKDDTTDTPPAPVLPPAPTQNEGDARAR
Ga0208475_101454013300027018SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKKSADPKDDRTDLPPAPELPPAPDQHEGNARGR
Ga0209861_102039023300027332Groundwater SandMSTDRYKAPTDPDEDAYEDAWYRALKAKATRRSGKPKDDTTDAPPAQAFPPAPTQNEGDAGAR
Ga0209899_103276713300027490Groundwater SandMPTDRYRAPKKPDQDAYEDAWYRALKAKATRRSGKPKDDTTDAPPAQAFPPAPTQNE
Ga0209814_10000040173300027873Populus RhizosphereMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKKSTDPKDDRTDAPPAPELPPAPDQHEGDAGAR
Ga0209974_1043435923300027876Arabidopsis Thaliana RhizosphereDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAR
Ga0209889_104811423300027952Groundwater SandMPTDRYRAPKKPDQDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAR
Ga0247828_1035606013300028587SoilMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTEAPPGTSPSAPDRAEDDAG
Ga0247818_1080717513300028589SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPDLPPAPDQHEGDA
Ga0247822_1037628723300028592SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEDDARAR
Ga0247821_1081573213300028596SoilFDRRTAMPTERYRPPPEPDEDAYEDAWYRALKAKASNRFADREDDTTDAPPGTSPSAPDRTEDDAGSR
Ga0247820_1094815723300028597SoilRYRPLREPDEDAYEDAWYRALKAKASNRFADGKDDTTDAPPGTSPSAPDRAEDDAGSR
Ga0247819_1065643823300028608SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDATDASPGTSHSTPERNEDDAGSGSR
Ga0307301_1006472413300028719SoilSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTADAPPGTSPSAPDRNEDDAGSGSR
Ga0307318_1022277323300028744SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADAKDGTTDAPPAPVLPPAPTQNEGDARAR
Ga0307318_1024057023300028744SoilMSTDRHKAPTQPDKDAYEDAWYRALKAKASRRIADPKDDPKDDTTDAPKAPVLPPPPTQNEDAGAR
Ga0307320_1014166413300028771SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPAAPELPPAPYQH
Ga0307282_1032107113300028784SoilMSTDRYRAPTEPDEDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0307323_1012788913300028787SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAR
Ga0307290_1003529113300028791SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADRKDDTTDAPPAPVLPPA
Ga0307299_1000185163300028793SoilMSTGRYRPPPEPEEDAYEDAWYRALKAKASNRFADPKDDTSYAPPGTSPSAPERNEDDAGSGSR
Ga0307305_1003302723300028807SoilMSTDRDRAPTEPDKDAYEDAWYRALKAKASRRFADPKDDTTDAPQAPAFPPAPAQNEGDAGAR
Ga0247824_1102976923300028809SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPDLPPAPDQHEGDAGAR
Ga0247825_1064068113300028812SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPP
Ga0247825_1084171523300028812SoilMPTERYRPPPEPDEDAYEDAWYRALKAKASNRFADREDDTTDAPPGTSPSAPDRTEDDAGSR
Ga0307312_1030676713300028828SoilDRYRAPTEPDEDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0307289_1003458643300028875SoilMSTGRYRPPPEPEEDAYEDAWYRALKAKASNRFADPKDDTSDAPPGTSPSAPERNEDD
Ga0307289_1032456723300028875SoilPEEDAYEDAWYRALKAKASNRFADPKDDTSDAPPGTSPSAPERNEDDAGSGSR
Ga0307278_1000891443300028878SoilMSTDRDRAPTEPEKDAYEDAWYRALKAKASRRFADPKDDTTDAPPAPVLPPAPTQNEGDARAR
Ga0307304_1024519723300028885SoilMSTDRYRAPTEPDEDAYEDAWYRALKAKASRRFADPKDDTTDAPQAPAFPPAPAQNEGDAGAR
Ga0308187_1024567323300031114SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPD
Ga0307500_1006015923300031198SoilMPTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRAEDDAGSH
Ga0307495_1001176933300031199SoilMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDDAGSR
Ga0307496_1007035223300031200SoilMPTERYRPLPEPDQDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRSEDDAGSH
Ga0307497_1065043723300031226SoilMPTERYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPATSPSAPDRTEDDAGSH
Ga0310887_1007613023300031547SoilMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRAEDDAGSR
Ga0307469_1145275713300031720Hardwood Forest SoilMSTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAS
Ga0307410_1037052213300031852RhizosphereMSTDRKKAPTEPDEDAYEDAWYRALKAKASRRSDRKHDTTNAPQAPVLPPAPTQNDGAGT
Ga0310904_1018385223300031854SoilMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTEAPPGTSPSAPDRAEDDAGSR
Ga0310891_1003573113300031913SoilMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPD
Ga0307414_1078252513300032004RhizosphereTEPDEDAYEDAWYRALKAKASRRSDRKHDTTNAPQAPVLPPAPTQNDGAGTR
Ga0307470_1052071923300032174Hardwood Forest SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAS
Ga0310889_1002874733300032179SoilMPTERYRPLPEPDEDAYEDAWYRALKAKASNRFADRKDDTTDAPPGTSPSAPDRTEDEAGSR
Ga0307471_10149272513300032180Hardwood Forest SoilDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPTPELPPAPDQHEGDAGAR
Ga0307472_10061954323300032205Hardwood Forest SoilMTTDRYKAPTDPDEDAYEDAWYRALKAKSSKRSTDPKDDRTDAPPAPELPPAPDQHEGDARAS
Ga0247829_1172844623300033550SoilMSTDRDRAPTEADKDAYEDAWYRALKAKASRRFADPKDDTADAPPAPVLPPAPTQNEGDARAR
Ga0364945_0268971_1_1593300034115SedimentMSTDRYKAPTDPDEDAYEDAWYRALKAKASNRFAEPKDDTTDAPPGTSPSAPD
Ga0314793_117690_66_2543300034668SoilMSTDRYRPPPEPDEDAYEDAWYRALKAKASNRFADRKDDTADAPPGTSPSAPDRHEGDAGSR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.