Sample 3300013754

3300013754: Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep2

Overview

Basic Information
IMG/M Taxon OID	3300013754 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118622 \| Gp0137598 \| Ga0120183
Sample Name	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep2
Sequencing Status	Permanent Draft
Sequencing Center	Georgia Institute of Technology
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	117845553
Sequencing Scaffolds	68
Novel Protein Genes	77
Associated Families	77

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2
All Organisms → cellular organisms → Bacteria	14
All Organisms → cellular organisms → Bacteria → Acidobacteria	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter → Hypericibacter terrae	1
Not Available	20
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Glomeromycotina → Glomeromycetes → Diversisporales → Gigasporaceae → Gigaspora → Gigaspora rosea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter violaceus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Terrestrial Microbial Communites From A Soil Warming Plot In Okalahoma, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial → Terrestrial Microbial Communites From A Soil Warming Plot In Okalahoma, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	USA: Kessler Farm Field Laboratory (KFFL), Okalahoma
Coordinates	Lat. (^o)	34.975667	Long. (^o)	-97.519	Alt. (m)	N/A	Depth (m)	200
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000135	Metagenome / Metatranscriptome	1961	Y
F000146	Metagenome / Metatranscriptome	1918	Y
F000381	Metagenome / Metatranscriptome	1210	Y
F000382	Metagenome / Metatranscriptome	1210	Y
F000493	Metagenome / Metatranscriptome	1078	Y
F001085	Metagenome / Metatranscriptome	782	Y
F001168	Metagenome / Metatranscriptome	758	Y
F001505	Metagenome	681	Y
F002032	Metagenome	601	Y
F003284	Metagenome	496	Y
F003720	Metagenome / Metatranscriptome	472	Y
F004567	Metagenome / Metatranscriptome	433	Y
F007705	Metagenome / Metatranscriptome	346	Y
F008364	Metagenome / Metatranscriptome	334	Y
F008410	Metagenome / Metatranscriptome	333	Y
F009030	Metagenome / Metatranscriptome	324	Y
F009227	Metagenome / Metatranscriptome	321	Y
F010353	Metagenome / Metatranscriptome	305	Y
F011015	Metagenome	296	Y
F011531	Metagenome / Metatranscriptome	290	N
F011607	Metagenome	289	Y
F012081	Metagenome / Metatranscriptome	284	Y
F013935	Metagenome / Metatranscriptome	267	Y
F014324	Metagenome / Metatranscriptome	264	Y
F014599	Metagenome	261	Y
F015785	Metagenome / Metatranscriptome	252	Y
F016821	Metagenome	244	Y
F018640	Metagenome / Metatranscriptome	234	Y
F018826	Metagenome / Metatranscriptome	233	Y
F019537	Metagenome / Metatranscriptome	229	Y
F021060	Metagenome	220	Y
F023886	Metagenome	208	Y
F024177	Metagenome / Metatranscriptome	207	Y
F024268	Metagenome / Metatranscriptome	206	Y
F024347	Metagenome	206	Y
F026116	Metagenome	199	Y
F027312	Metagenome	195	Y
F027892	Metagenome	193	Y
F028691	Metagenome / Metatranscriptome	190	Y
F030929	Metagenome / Metatranscriptome	184	Y
F031132	Metagenome / Metatranscriptome	183	Y
F031311	Metagenome	183	Y
F032026	Metagenome / Metatranscriptome	181	Y
F032327	Metagenome	180	Y
F033861	Metagenome	176	N
F035953	Metagenome	171	Y
F036222	Metagenome / Metatranscriptome	170	Y
F039813	Metagenome	163	Y
F041970	Metagenome / Metatranscriptome	159	Y
F042887	Metagenome / Metatranscriptome	157	Y
F045185	Metagenome	153	Y
F045189	Metagenome	153	Y
F048065	Metagenome / Metatranscriptome	148	Y
F050349	Metagenome / Metatranscriptome	145	Y
F050646	Metagenome	145	Y
F051223	Metagenome / Metatranscriptome	144	Y
F056386	Metagenome	137	N
F056397	Metagenome / Metatranscriptome	137	N
F057660	Metagenome	136	Y
F059112	Metagenome	134	Y
F060799	Metagenome / Metatranscriptome	132	Y
F061959	Metagenome	131	Y
F073208	Metagenome	120	N
F073998	Metagenome	120	Y
F075310	Metagenome	119	Y
F076212	Metagenome / Metatranscriptome	118	Y
F081003	Metagenome	114	Y
F082484	Metagenome	113	Y
F085257	Metagenome	111	Y
F087000	Metagenome	110	Y
F090218	Metagenome	108	Y
F093450	Metagenome	106	Y
F093678	Metagenome	106	N
F093679	Metagenome	106	Y
F094374	Metagenome / Metatranscriptome	106	Y
F094375	Metagenome	106	Y
F100742	Metagenome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0120183_1000017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	4194	Open in IMG/M
Ga0120183_1000213	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
Ga0120183_1000323	All Organisms → cellular organisms → Bacteria → Acidobacteria	1485	Open in IMG/M
Ga0120183_1001146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Hypericibacter → Hypericibacter terrae	1080	Open in IMG/M
Ga0120183_1001214	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
Ga0120183_1001333	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
Ga0120183_1001424	Not Available	1025	Open in IMG/M
Ga0120183_1001779	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Fungi incertae sedis → Mucoromycota → Glomeromycotina → Glomeromycetes → Diversisporales → Gigasporaceae → Gigaspora → Gigaspora rosea	977	Open in IMG/M
Ga0120183_1001997	Not Available	951	Open in IMG/M
Ga0120183_1002010	Not Available	950	Open in IMG/M
Ga0120183_1002156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	936	Open in IMG/M
Ga0120183_1002626	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
Ga0120183_1002754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
Ga0120183_1002926	Not Available	873	Open in IMG/M
Ga0120183_1003212	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
Ga0120183_1003283	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
Ga0120183_1003633	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
Ga0120183_1003986	Not Available	813	Open in IMG/M
Ga0120183_1004597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
Ga0120183_1004797	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
Ga0120183_1005046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	770	Open in IMG/M
Ga0120183_1005294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	762	Open in IMG/M
Ga0120183_1006148	Not Available	735	Open in IMG/M
Ga0120183_1006185	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
Ga0120183_1006763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	719	Open in IMG/M
Ga0120183_1006891	Not Available	716	Open in IMG/M
Ga0120183_1007621	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
Ga0120183_1007886	Not Available	694	Open in IMG/M
Ga0120183_1008084	Not Available	691	Open in IMG/M
Ga0120183_1008659	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
Ga0120183_1009157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter violaceus	672	Open in IMG/M
Ga0120183_1009876	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
Ga0120183_1009884	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
Ga0120183_1011077	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
Ga0120183_1011502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
Ga0120183_1011946	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
Ga0120183_1011977	Not Available	631	Open in IMG/M
Ga0120183_1012246	Not Available	628	Open in IMG/M
Ga0120183_1012641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
Ga0120183_1012789	Not Available	622	Open in IMG/M
Ga0120183_1012818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
Ga0120183_1012841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
Ga0120183_1012994	Not Available	620	Open in IMG/M
Ga0120183_1013708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	612	Open in IMG/M
Ga0120183_1014429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	605	Open in IMG/M
Ga0120183_1015208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	597	Open in IMG/M
Ga0120183_1016236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
Ga0120183_1016421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
Ga0120183_1018115	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
Ga0120183_1018241	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
Ga0120183_1019730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	562	Open in IMG/M
Ga0120183_1019985	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
Ga0120183_1020708	Not Available	556	Open in IMG/M
Ga0120183_1021958	Not Available	548	Open in IMG/M
Ga0120183_1021996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	547	Open in IMG/M
Ga0120183_1022085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	547	Open in IMG/M
Ga0120183_1022624	Not Available	544	Open in IMG/M
Ga0120183_1024226	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
Ga0120183_1024483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	533	Open in IMG/M
Ga0120183_1025151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
Ga0120183_1025380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	528	Open in IMG/M
Ga0120183_1026083	Not Available	524	Open in IMG/M
Ga0120183_1028939	Not Available	511	Open in IMG/M
Ga0120183_1029145	Not Available	510	Open in IMG/M
Ga0120183_1030745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
Ga0120183_1030821	Not Available	502	Open in IMG/M
Ga0120183_1031268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	500	Open in IMG/M
Ga0120183_1031286	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0120183_1000017	Ga0120183_10000173	F093450	MCVRAQTSALGIAIRSDHLKREESKARESKVEITNTLNAEKDQQPQLSLVEFQAAEGSFRQPTAAEVSILTFWKLRYARSRAQELSNEFARLLNRGSSLE*
Ga0120183_1000213	Ga0120183_10002133	F073998	MKIAIANLFKNSNRKQILFEVEDELQFHIEMLERKYVQDGMSAAAAKTAALRRFGSIERAMKQCVDIRSRNSLLRRVLKTSLILLGLAGFFIRILSSELYIDRIGGVLIMIAISGRLLLYVRGLSPSTFLSGTNETCPSIVTESPQDSSKLRGA*
Ga0120183_1000323	Ga0120183_10003234	F001505	MSDIYVMQNAKDETNSPIQAEFDPIRWALLNPWLSEGQPDDRKPMNGSVKDSGGTPSVQRSFARRSHQAMFKKWSQARRD*
Ga0120183_1001146	Ga0120183_10011462	F024268	MAITEAFAGTEAVSTTEHSLTTDTAGPDVETSDGVFQVFLDVSDMVTGDELQIRIYEKVQSADTQRIVYQSNLVGPQSPPIWVSPSLVLMHGWDVTLDAIAGTITVTWSIRKVA*
Ga0120183_1001214	Ga0120183_10012142	F076212	EINGARVFVVTARTPKDATTPAKVWNFFFTESAGRIYSLTADSPVEHADRMSKEAERFIGSLQSATPAEPKK*
Ga0120183_1001333	Ga0120183_10013332	F032327	AKATVAARELVVYAQPSKDPPSGLEIRLAWEIDITNAPIKKVYLDAISEQIIATS*
Ga0120183_1001424	Ga0120183_10014241	F008410	TLRLKLMFHVVSSHFVAAPDPLKSVSGAFNARVYASETISCFVATNMPNPLFQSKTHVLGGSMPFRSRTPVAKTGIEAHLMHEFMPLEPFLVFLQQTCPIHYFRSKTQVLDGFTPFCCRTRPAAKISIGVHLKHEFVPRKPFLVWSQRTCSIHNFRSKTHVYNSGYLNALLHSFQLM
Ga0120183_1001424	Ga0120183_10014242	F028691	SGAATKWRETTRNTSFRRKVCGAKPDGRFRAPKWCENTQNVSFGPKGVH*
Ga0120183_1001779	Ga0120183_10017791	F100742	MNEYEKALNFLEVGCGCGCSAKLPKEEFAELREDFQALTKPEQDIFLMAQLRSMDGGTISTSRRLKNKTRVNKRTVYC*
Ga0120183_1001997	Ga0120183_10019971	F056397	MKRFLLVIALALGLLAASALPAVADEHVAKPSNWSHNRTKVYTTTAVNQHNQYGDLQGILKFRQRSAPNTGTFDIQIDYVRLYRVLPDRSGLLVVGENTDQNLLVTETWTYVNSGWQACGPNLPIGLYYAVSRFQLIHKHTVGADDYSGWSWVRTGKWHYDGRCF*
Ga0120183_1002010	Ga0120183_10020102	F042887	GRALELDASSALAHAGIARERGMTIQQRRDDYPNPWRIQVRGHPARRESISWREAIRDAVTDTYPQAPFTSPPLGTKFTVEVIFRMTPEDLARPAFDLDNFAKPVLDTLFTSQNVSRLTGVLLPGVNDTWVFRLLLEKVGVKTPQEQGADITVTWHPSVTPDLSTS*
Ga0120183_1002156	Ga0120183_10021561	F032026	MFNVVVEWLDQDKSRARFSLPGRQEWRAEHIDALIQVLGEIRAEMSPAVSEQPPAVHADALHNPRYATELHTFSGGTLLEIRHPSLGWMDFILPSLERVRISRSLAEQEATWQGFRR*
Ga0120183_1002626	Ga0120183_10026262	F045189	AITAAVLGVGMVLPASVPALVLSDVWRTSAPIPIAPVPKHVLLSVFLV*
Ga0120183_1002754	Ga0120183_10027541	F039813	IPGATPSSSGEIEMVNSGWPIITGIGFSFMMGLIFAGGIVLLVEFSERVLGHGMVASIVPALLIAIAITSYLEPRWILIGLSFLSSLLTCLLAVLLYRRYGFATVWLALSVNFILAAAVRSHYLKDPGFVWQSNLLLVVVGLLLIAGIWGYTQKRLRTTLSALAVNRG*
Ga0120183_1002926	Ga0120183_10029261	F073208	MIAQNEEVPHRRATAVVTIAAGVTSLASLIVGLSGADFDFEAVSEAATFIALGTDAVAPVRWGLWLSMFGSYLLLVPVALLLLRWLRQDDPVVADLSTVAAGFYILLGAAGASVLASTLPDLIQQYADADAAMRAGLLNDFDLARRIAEDGLQGVVQNVAGAAWFLGMGSLLRRHRPTLGAAAIAVGAFLVVNAVGIMVDVEALRFIGLTGTVLLAPAWAIGMGASLLRSP*
Ga0120183_1003212	Ga0120183_10032121	F023886	MGLLNLLPKEDQYFDLFTQMTLYISAAARELKEMLADKNQAYGE
Ga0120183_1003283	Ga0120183_10032832	F011607	MSEEDLELLITTDDPGEDTLEEDTFHLQADNATAPRFGQPQGGDPTSKQK*
Ga0120183_1003633	Ga0120183_10036331	F003284	LELTAKSQVILLDKLSLPLEFPMHIRIILFSTLMLCCSGTALAQRPGPEFWRRVGCEPLEPRTKLERIDDRHSTVIVKGFTRITTVEVHGVRIDAVDLREMGNVSRAKGIVVVVTSPVEGSNRPRDHRAFVDYEEIDPLLNALDAAARVDETMTKFPGFEAKYRTLGDLEITVFRQTRSGNAALLTTGVCEQARTALTFDELAKIRAMIQEAKARLDEIR*
Ga0120183_1003986	Ga0120183_10039862	F030929	VIGESQRLSDAEQLDILALLEAASTEHSAMRAARALAELMRHLHVLGQRIAGELPHQDRNGAPAKR*
Ga0120183_1004026	Ga0120183_10040262	F075310	MMKKISFAAFAFALAMLIAAPVAQATTVSEVQSMITQLKGKVQIITISGKFAETKDRPGLLGQLDGVSLTLDQGKFCDSVKKVQDFKIKVT
Ga0120183_1004597	Ga0120183_10045971	F036222	MSTDRKRSPTEPDEDAYEDAWYRALKAKASRRSDRKDDTTKAPRPPVLPPAPNQNDGDAGAR*
Ga0120183_1004743	Ga0120183_10047431	F059112	MLKIHAKNLDSFTVLSLHGQIVTGETDTLRTAVHSLPVTSAVVLDLARVTTVDAHGLGV
Ga0120183_1004797	Ga0120183_10047972	F000381	MCPACIASTAVMVTGAGITGGILAVYIGRFRKFFSARGFGLFEKTKEKRYGNKQ*
Ga0120183_1005046	Ga0120183_10050461	F019537	AQTNSVHINHDLLMHSRAARISKRLLQASVVTNALAPALVICLTAVCAMAQGPSGGTIFGGNDQTLGNGIRELIKWGRNLLFILGVGGIGWAVFNYMTEKNWTKQALGGVFCFAFGAVASLAYSFSQGNAVNLDTDLSQ*
Ga0120183_1005294	Ga0120183_10052942	F056386	MKKLILALLTLLAIFLLSGVALGDTLYLRDGRSFRGTLIGYINGRFAFKVIDTTRTTTQRDTVARDEGEIRF
Ga0120183_1006148	Ga0120183_10061481	F027312	MLTTNRKSTALVIGISVVSALLLLSALINTIDLALFTSVGIKSWLVLLLLTIAFSRLSVRVTSNDGVLRSRESIADSFVLLAVMLYAVPPSNSAGPAVVLAALVGFFSNYRLAALHPYVTNPRSTP*
Ga0120183_1006185	Ga0120183_10061852	F001085	RERGDFPPEAADALAPIAAEDSPGYVIAIESVLESFECRDEYLEEIPVADTVLVLQALAGRRRLPADLASPLVPPG*
Ga0120183_1006624	Ga0120183_10066242	F000146	MALARVVSFEGVSKERIEEMKREWAGGRERPEGMPASEFIMLHDAESETSVAIVFFDTEDDYRRGDEILSAMPADDTPGRRTSVSKYDVAHRMTA*
Ga0120183_1006763	Ga0120183_10067631	F008364	EYEKVSEGPTKVNSMDAYEFRWTGLSRGTEKGDLQLWGRVVFLPTGNEGDTTGATLTMFSTSLASELASVDDVGDKGETPVILESFRFKKK*
Ga0120183_1006891	Ga0120183_10068911	F033861	MQITRSIICEECKLPRKSRQWFDVCDLCVGKLPKVQCAACARKVRRLQPDSPLCLECSRRLSKVKIVCEKCGLADYPRISDPGHCRKCYLNAVHRKNVKLRLRKFVCGACGLTKTSLPNAEMICKSCYEKRRTSKGRCTVPGCRGSILHKKLQLCRNHHADRQAPKRLNKYIKSYDSPFPQNVRYFLALTARLGLVDCNVDERTVPVRDLCKYRAVGEYLQSHELP
Ga0120183_1007621	Ga0120183_10076211	F045185	GIGDPEAPDWISFESVVDGRAMRLNYSGIVFRRTFTP*
Ga0120183_1007886	Ga0120183_10078861	F004567	MKANTTRNVTSVVMLVVLSPFLALAMLVSIKTVGIKDDYVLLMLLTLSSAVFSGINGFGRRTSTPVPLSTANERGFNPSQTCIPLSARSSNNA*
Ga0120183_1008084	Ga0120183_10080841	F082484	TDVPGQATESADYVLIAEIVNIERWQQQAEQRVQGLADDLEHLVSSRRMLVLERIL*
Ga0120183_1008529	Ga0120183_10085291	F027892	MEPPNQISPPVKQPRIIPWEEQLQDHNEKIEEYLRNLVFRGCTYETTVKTARVVLKRLFDGLQLEDPNHPRGRRQI
Ga0120183_1008659	Ga0120183_10086591	F014599	LALTSLFLFVLFVGPVRAQGRSGAEQERVVRETYRKLETYNAAAQIFQNEMTSKPIRAEVNLSFELTAFRYGTVPEILNQRYADLVTLPTGDVVSLTRGGHSLDGGPQEATFAAEWEHGRYAAVFDPEWTVADVFHFEAARYYDIRTYVAYRVTVKLDGRSRTYRALALFHEAREPGDVGAPEFWDAIVNGVGNVWEEKRPPYKGGILVERSGADLSVSANTVSEE
Ga0120183_1009157	Ga0120183_10091571	F031311	NQQARRVLDDGIEAMGGVEALRAIKDFTLKEKGKLHARYQSPGAEPPFAVGTSEETLIVDTERGFVFDDLKTANAGFNNWTITVIKGTEGQTFDMWSKTATPVNNPSVNNFRGQIRRLPSFVLLEALDRAATLRWLGEEEIGGRKQKVISVLRPDNQQLSLSFDAQTNLLTRYGYLYADPITGDSEIAQTYSGYRTVGKLKLPSGRVLYNSGGIVQETEYTDLQ
Ga0120183_1009876	Ga0120183_10098761	F000382	ATRELLTGKLAGLWGAATDQDAFDSWTLDKKHGMLLLLNRMQCKGLWHLVKKVTNVYGEGGVGLQFEAWPMIESTLKRRSDFTRLFANHGDTKGGFYEKKRGGAVLHFLFQEGEPRRWYVHFDLYSPIHSVRSAVRHFRQEFLGGLTPDWKMITKSLNTPRRRGKIFGVR*
Ga0120183_1009884	Ga0120183_10098842	F093678	MATKARTIKIADLSSVIDQAVQASAGRTLPGGTLIGRQIAASLAAKINPNDLARDITKQVKAAVPDATLTPKVIKEGKIIICGFIIKPPSPIQ*
Ga0120183_1011077	Ga0120183_10110771	F090218	MVMKRFSKIRTLMPILFLLLGTIPVSAVERPFALNGAGVATLITDESGNLIGAIPTGSGTATHLGQWT
Ga0120183_1011502	Ga0120183_10115021	F014324	MKTRKSLFYAQRIIFTALLLELSACTSQTVKMIQPQTGATAECSGSSVGFGQLFTESFTDSCARVYENRGYVALERLTPEEGASLERRGLLPKD*
Ga0120183_1011946	Ga0120183_10119461	F016821	MLKILKQTESAKLVRFNLHGGFTGEYLPEVEKALSENGSRKGKVALDLMNVTFVDREAMEFLRRAISKKKIEIENIPSYVKRWIEQEVS*
Ga0120183_1011977	Ga0120183_10119771	F048065	MDIRPILSHELLVGDYLGVISSMHHPEHFRRVEKLEYVDADLGRRHLKQDVFYLEAAQMGPVIAWCHGIAGPLILPAGDVHIWLDVPQDRRTSDERDVYWGVLSGGGEPLFTFSRLPDQTDTWQQHRIQERQAFWQRDQPK*
Ga0120183_1012246	Ga0120183_10122461	F003720	MMKSMMKKISFAAIAFALAMLVTAPVAQATTVSEVQAMITQLKGKVQIININGKNAETKDRPGLLGQLDGVSLTLDQGKFCDSVKKVKDFQKKVTDMISADNKINQDPALGVTAQELIADGDAIIKALNELAVQSNGSGCGY*
Ga0120183_1012641	Ga0120183_10126411	F018826	MDIGLPETEQEIEITPLEEPLPEPAPLEEPVEEPVPA*
Ga0120183_1012789	Ga0120183_10127892	F085257	LFACFGRVVIKHQKGGDCKENGPRPILVWILVFDDQQDQIGLMCLQVFVL*
Ga0120183_1012818	Ga0120183_10128181	F000493	SDLIDLGDVYDMAAAVRDATRKAEQVRPNSQASIVWISDGIAPIFFEDRDATEQIIIRKNVIFNSLTVEMRTLFKFLMPIGKPVAGWLGVSLYGSAKHLAQRSGGEAVKVGRAKDYGTGLSKIIGNLTARYSLGFALAESEIDDGRMHSLEVRVKAQDQKGKTRKLQVSSRQGYYMSSTIPKEAAGKGQEAQGWGCMGPPQRGRTV
Ga0120183_1012841	Ga0120183_10128411	F041970	MFDNLVESSSHKDDITRKGSFVGITALIYLVLMVAFFVAGIYWYDAKLGEMELELT
Ga0120183_1012994	Ga0120183_10129941	F018640	FSLIEDLVPDGELRRLGLADRDGTCAAGRPPLPS*
Ga0120183_1013708	Ga0120183_10137081	F010353	LAYITQEPDPLVPLLSDAVHIDSQTQVQREVQANLLNEIESVTGQIADPELREISQTILGEMLRFFDWLTRIENNLHKLDTLLESLSLLEVLEFESRSLTDYIDSKAIKSAGENERLKDVLDGICYGINHDLRRIFERELVRGVTEQSIPIVYGKIMHAHGLLTNCFQQSTITLLQVFKPDLDASKLFNDVELRLQQSLILCK
Ga0120183_1014429	Ga0120183_10144291	F050646	MRIRAPLLLCIVLAGCSVTWDERHHEATIVRPSNFKAGSGVIQSVGVLRGQREAGTGVDAEGKHPDRNLYRLLIHMDAGGVQTVDIDSSRFLAGEAVELTNDGRVVRITGTTLNQLTNR*
Ga0120183_1015208	Ga0120183_10152082	F031132	VHLTKEGRKIITRIYTDHAADLERLVSASLSRKERETLIRLLKQIGYEAADESTHSKAQRKREIQFARDE*
Ga0120183_1016236	Ga0120183_10162361	F061959	LSAADGLIGSFRDRSWVVPQRIPGRLEAFQSYNDSWSGWPVLPLKRQHPIRGSFLDPRPDPERGAIYHEGVDVAVRDDRPEPGAPLD
Ga0120183_1016421	Ga0120183_10164211	F057660	MEARVDAVFDSLRQDSAFLALTSGADGKLQMPMRNMTGTANQD*
Ga0120183_1016971	Ga0120183_10169711	F000135	VMWFSLRSPELAEDFERLMASDRDIVRSSLDTMSDWRLTRPMDVPGQAGGGEAADYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRKYLVLERVL*
Ga0120183_1018115	Ga0120183_10181151	F009227	FMAIPYLVLPFAGALAAYWSRRMKGSVLERILSALFPVFAFVALFAVRIVYGLFFEGQPYTLPHFLAGFSVTLVFIVVGGLLLVLGAWPFCRPHLREQLP*
Ga0120183_1018241	Ga0120183_10182412	F001168	GRDGERADAADKAQEQFQEEMEALLERHVLNGLVDAPWVRTDDPESDDDDRFFAALQELVAYAFEESVRIKKGRLFPGWHEIPVRSSRGILQEVQSLLQKYRSELVRQSRLPDQGGRA*
Ga0120183_1018841	Ga0120183_10188411	F011531	MDLHLFADVGVVPRGAQAPELAPVEPPQPDALEAERFEQEFDQYVESQSVTGLTLAPSALKAMTPDALLANLAGQVAQARTLRWISNDAMTRNVTDKLQAARTAIARSQVDASRKILGALRTEVAALSGKGFTSEAVALVDVNVQYVLRLLAKR*
Ga0120183_1019183	Ga0120183_10191831	F081003	MFRDVINKLSLRKRLTILVTVGVFLPVLVLTYMQYRSLAEL
Ga0120183_1019730	Ga0120183_10197301	F015785	MNPELNIESRPDRTYKERFNEFLASRRGKMFGIVEVIALAGSCFVLALVLFSYLYFLVPARSRISSLNTDRKQIETNIKTLDTVVSKEHGSQQTVDSVVASLNDFETKHLQRQDQGRMQLYEELNQLIVKNK
Ga0120183_1019985	Ga0120183_10199852	F093679	MRIASQLLLTFLLNSLWQIALIAALATFGAWLLRNSAVRYRHWVWVGAL
Ga0120183_1020708	Ga0120183_10207081	F094375	MAGLALLLLCAGSHAQQHYDVPREMHCSAKPYCGQSGRACNTVEKTYTGAAAGSAKHSIVQACVDANRPDRCNCIQQCRQVARCSKF*
Ga0120183_1021958	Ga0120183_10219581	F051223	MTKLLRALGAAMLCLGLLSSASMAMQEQMPAKEKKEKKEQKTTTLNGTVSAVTDSTVTIVDGQKAEHVLAVTSATKVTKGGKDATIADVKANDTVAIEASKGDDNTWTALRIAVS*
Ga0120183_1021996	Ga0120183_10219962	F007705	MPRKDAAALGHVCPGIRIHTIDMAQPPGIGISPIADIDEHQMIVIAALAKKISAETPKKAHS*
Ga0120183_1022085	Ga0120183_10220851	F013935	MARIRAPLLAEVLGFLGIVPEIGIFGELVQLCQPCRRFLDVKDASSAARPTA*
Ga0120183_1022624	Ga0120183_10226242	F024177	MLQAWRQLEHERRKKVLEFSQDQLALSLLQVEKAILGSVQTPEEAFEIVRNVSSAWTAENGGPKRASP
Ga0120183_1024226	Ga0120183_10242261	F087000	MATATDRQKSAKENFAVPDSGERKISLLVVEDDENISRAI
Ga0120183_1024483	Ga0120183_10244831	F009030	MKSCPKCNRTFPDEGQKFCTFDGGLLIAPQTFDPNATIRATSIDLNAAAERPTSRDLPDPNATIIENYPATVALPRNTGPTGPGTSDMS
Ga0120183_1025151	Ga0120183_10251511	F026116	FENQDFDGDFIKFRASLNGALSLNWIPVIQTFSATNKEQTYIFLRGAEEKFNVLVITIEPREATVVQVTLSPKNLAQLLKDPEGTGKAITQEATIIDQE*
Ga0120183_1025151	Ga0120183_10251512	F035953	MPRNFLLLIVIAIVASFSINAQEVEDTIKIKTRVVFLDALVKDKKTNLPISNLTPENFEVLDDGKPRPISYFTRE
Ga0120183_1025380	Ga0120183_10253801	F021060	VWDRKRQLVWLAGGLILGTWVSYSDSFDEDGTFVPRFFIFMECFVLLIMGVLFWIYSRKKG*
Ga0120183_1026083	Ga0120183_10260831	F002032	MPDNTITDTHAKSETPYAVVNLTPSDLEPKDWAFLREWANRLGVSLEVLLHRILVAAVIGQLYVEKIPEV*
Ga0120183_1028939	Ga0120183_10289391	F094374	MSQRTRSRASSANNDANGDDGGATVATAEAPEREAR
Ga0120183_1029145	Ga0120183_10291451	F024347	IVELAREAGVPLPEDLRPHDLRRTCATLALEQNPLEYRKVLRKLGHTYPSSAAPYLIATDADVEDEQGDLIDIFINPEIEKWRTK*
Ga0120183_1030745	Ga0120183_10307451	F050349	MKVVVTLANEKKHDLLLRDSDAKEWARRFGARGTSALGDWVEVVPEEGAGRTFVRASQVVTVQLIDGPEDNPQAVPRP*
Ga0120183_1030821	Ga0120183_10308212	F060799	HAPFLSLFLFTSAALALPVGCTGGVIDGATEAMVFWGNSVDNVTPKEHIRYYLYLNGQFDGATVDPYPHQFTMYLTLGIVNTIEVYAVDEAGNRSAPATMTIDLRIP*
Ga0120183_1031268	Ga0120183_10312681	F012081	MNAKMRGLRFWKDWGLVSRLMLAVGTAIVAGGGVQTYLLMAEGAAEHSARLKRELNETLTFMAPLVADQAILGEYAVISQLLNNQVKKGEVDGFVWTDKDGRKLTAIVRGGELVKG*
Ga0120183_1031286	Ga0120183_10312861	F011015	QTPLESPNAEFLYLYGRANLLTGNTDEASKAFDAAILKADANPTPANATIKKDAIIGLGVISARTGTQRDLWKVRNHYEELTRPPANTNTP*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300013754: Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep2

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences