Metagenome / Metatranscriptome Family F039084

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F039084
Family Type	Metagenome / Metatranscriptome
Number of Sequences	164
Average Sequence Length	43 residues
Representative Sequence	TADGRVIEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
Number of Associated Samples	142
Number of Associated Scaffolds	164

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.66 %
% of genes near scaffold ends (potentially truncated)	89.02 %
% of genes from short scaffolds (< 2000 bps)	90.85 %
Associated GOLD sequencing projects	134
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.293 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.341 % of family members)
Environment Ontology (ENVO)	Unclassified (31.707 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.073 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.41% β-sheet: 27.94% Coil/Unstructured: 67.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 164 Family Scaffolds
PF00583	Acetyltransf_1	5.49
PF00011	HSP20	4.27
PF01594	AI-2E_transport	3.66
PF03486	HI0933_like	1.83
PF03466	LysR_substrate	1.83
PF12833	HTH_18	1.83
PF05532	CsbD	1.22
PF09828	Chrome_Resist	1.22
PF00575	S1	1.22
PF00072	Response_reg	0.61
PF05016	ParE_toxin	0.61
PF12680	SnoaL_2	0.61
PF10129	OpgC_C	0.61
PF08755	YccV-like	0.61
PF00764	Arginosuc_synth	0.61
PF04191	PEMT	0.61
PF01740	STAS	0.61
PF01936	NYN	0.61
PF04140	ICMT	0.61
PF07332	Phage_holin_3_6	0.61
PF13650	Asp_protease_2	0.61
PF07589	PEP-CTERM	0.61
PF06745	ATPase	0.61
PF10114	PocR	0.61
PF12836	HHH_3	0.61
PF02518	HATPase_c	0.61
PF02687	FtsX	0.61
PF00291	PALP	0.61
PF00300	His_Phos_1	0.61

COG ID	Name	Functional Category	% Frequency in 164 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	4.27
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	3.66
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	3.66
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.66
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	1.83
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	1.83
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.83
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	1.83
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	1.83
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	1.83
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	1.83
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	1.83
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	1.83
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.22
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.61
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.61
COG3785	Heat shock protein HspQ	Posttranslational modification, protein turnover, chaperones [O]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.29 %
Unclassified	root	N/A	6.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.29 %
Unclassified	root	N/A	6.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.29 %
Unclassified	root	N/A	6.71 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	34.15 %
Unclassified	root	N/A	6.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	34.15 %
Unclassified	root	N/A	6.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	18.29 %
Unclassified	root	N/A	6.71 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.44 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.61 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.29 %
Unclassified	root	N/A	6.71 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.44 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.44 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.29 %
Unclassified	root	N/A	6.71 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.44 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.22 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.61 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.29 %
Unclassified	root	N/A	6.71 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2.44 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.22 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.61 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.29 %
Unclassified	root	N/A	6.71 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	2.44 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.22 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.61 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	18.29 %
Unclassified	root	N/A	6.71 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	2.44 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.22 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.61 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17242336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1069	Open in IMG/M
2088090014\|GPIPI_17411813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1408	Open in IMG/M
2166559005\|cont_contig41332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	937	Open in IMG/M
2170459005\|F1BAP7Q02IOU70	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
2170459007\|GJ61VE201EEIIG	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
2170459009\|GA8DASG02I83WQ	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
2170459012\|GOYVCMS02F4UT2	Not Available	504	Open in IMG/M
2228664022\|INPgaii200_c1159560	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105037693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	753	Open in IMG/M
3300000550\|F24TB_10642640	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300000955\|JGI1027J12803_100307560	Not Available	532	Open in IMG/M
3300000955\|JGI1027J12803_102969078	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300002899\|JGIcombinedJ43975_10106557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	517	Open in IMG/M
3300004157\|Ga0062590_102929792	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300004480\|Ga0062592_102441463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	525	Open in IMG/M
3300005178\|Ga0066688_10060737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2215	Open in IMG/M
3300005179\|Ga0066684_10176113	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300005294\|Ga0065705_10505694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	768	Open in IMG/M
3300005294\|Ga0065705_11064926	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005329\|Ga0070683_101127428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	754	Open in IMG/M
3300005347\|Ga0070668_101715187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	577	Open in IMG/M
3300005364\|Ga0070673_102233246	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005445\|Ga0070708_100778495	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005445\|Ga0070708_100869887	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005456\|Ga0070678_100689299	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005468\|Ga0070707_100980175	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005471\|Ga0070698_100176683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2075	Open in IMG/M
3300005536\|Ga0070697_100222874	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300005546\|Ga0070696_100444855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1021	Open in IMG/M
3300005559\|Ga0066700_10345181	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300005559\|Ga0066700_11107523	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005569\|Ga0066705_10300299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1018	Open in IMG/M
3300005575\|Ga0066702_10278923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1020	Open in IMG/M
3300005598\|Ga0066706_10464443	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300006028\|Ga0070717_11366148	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006028\|Ga0070717_11550814	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006034\|Ga0066656_10495639	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300006755\|Ga0079222_10032971	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300006797\|Ga0066659_11189809	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006903\|Ga0075426_10968701	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300006954\|Ga0079219_12354443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	516	Open in IMG/M
3300007255\|Ga0099791_10640664	Not Available	521	Open in IMG/M
3300009098\|Ga0105245_13256334	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009148\|Ga0105243_11809977	Not Available	642	Open in IMG/M
3300009174\|Ga0105241_12012732	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300010048\|Ga0126373_10116269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2496	Open in IMG/M
3300010303\|Ga0134082_10473927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300010360\|Ga0126372_10549940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1096	Open in IMG/M
3300010371\|Ga0134125_10383237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1560	Open in IMG/M
3300010397\|Ga0134124_12526649	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300010399\|Ga0134127_11771666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	693	Open in IMG/M
3300011119\|Ga0105246_12086285	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012011\|Ga0120152_1017057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2847	Open in IMG/M
3300012205\|Ga0137362_10165437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1897	Open in IMG/M
3300012212\|Ga0150985_112163604	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300012361\|Ga0137360_10044867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3154	Open in IMG/M
3300012361\|Ga0137360_11285503	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012362\|Ga0137361_11555922	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012362\|Ga0137361_11718303	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012469\|Ga0150984_118283519	Not Available	832	Open in IMG/M
3300012685\|Ga0137397_10399621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1023	Open in IMG/M
3300012897\|Ga0157285_10016144	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300012910\|Ga0157308_10249696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	625	Open in IMG/M
3300012917\|Ga0137395_10774208	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012918\|Ga0137396_10818795	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012923\|Ga0137359_11710286	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012957\|Ga0164303_10913421	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012958\|Ga0164299_10477446	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300012958\|Ga0164299_11282857	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012961\|Ga0164302_10268419	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012961\|Ga0164302_10567692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300012961\|Ga0164302_10747073	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012989\|Ga0164305_11740415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	561	Open in IMG/M
3300013096\|Ga0157307_1136298	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300013297\|Ga0157378_13194840	Not Available	509	Open in IMG/M
3300013307\|Ga0157372_12179491	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300014058\|Ga0120149_1014854	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300014325\|Ga0163163_12627735	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300014745\|Ga0157377_10867062	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300014968\|Ga0157379_12516956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300014969\|Ga0157376_10418014	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300015264\|Ga0137403_10841042	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300015371\|Ga0132258_10432684	All Organisms → cellular organisms → Bacteria	3277	Open in IMG/M
3300015371\|Ga0132258_12695166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1240	Open in IMG/M
3300015372\|Ga0132256_100362271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1546	Open in IMG/M
3300015372\|Ga0132256_100973242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	964	Open in IMG/M
3300015374\|Ga0132255_103614349	Not Available	658	Open in IMG/M
3300015374\|Ga0132255_104797771	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300016319\|Ga0182033_11366360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300018000\|Ga0184604_10106397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300018028\|Ga0184608_10384932	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300018433\|Ga0066667_11108750	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300019361\|Ga0173482_10125927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	966	Open in IMG/M
3300019881\|Ga0193707_1109196	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300019886\|Ga0193727_1163626	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300019887\|Ga0193729_1016446	All Organisms → cellular organisms → Bacteria	3251	Open in IMG/M
3300019887\|Ga0193729_1027190	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300019887\|Ga0193729_1136853	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300019890\|Ga0193728_1068349	Not Available	1694	Open in IMG/M
3300020001\|Ga0193731_1007222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2827	Open in IMG/M
3300020006\|Ga0193735_1167260	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300020012\|Ga0193732_1069218	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300020018\|Ga0193721_1057264	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1021	Open in IMG/M
3300020059\|Ga0193745_1089525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300021171\|Ga0210405_10002185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	20649	Open in IMG/M
3300021344\|Ga0193719_10062616	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300021344\|Ga0193719_10219700	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300021344\|Ga0193719_10367774	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300021413\|Ga0193750_1080930	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021418\|Ga0193695_1017116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1502	Open in IMG/M
3300021432\|Ga0210384_10298263	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300021478\|Ga0210402_10508487	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300022534\|Ga0224452_1063292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1109	Open in IMG/M
3300022694\|Ga0222623_10061417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1450	Open in IMG/M
3300023058\|Ga0193714_1029479	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300024181\|Ga0247693_1061795	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025271\|Ga0207666_1056680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300025290\|Ga0207673_1052499	Not Available	578	Open in IMG/M
3300025898\|Ga0207692_10672841	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300025910\|Ga0207684_10362478	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300025915\|Ga0207693_10901847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300025921\|Ga0207652_11169849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300025922\|Ga0207646_11626804	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300025926\|Ga0207659_11208496	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300025933\|Ga0207706_11633012	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300025939\|Ga0207665_10000279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	35535	Open in IMG/M
3300025960\|Ga0207651_11699028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300025972\|Ga0207668_10997143	Not Available	748	Open in IMG/M
3300026089\|Ga0207648_10285171	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300026328\|Ga0209802_1040061	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300026334\|Ga0209377_1036600	All Organisms → cellular organisms → Bacteria	2296	Open in IMG/M
3300026374\|Ga0257146_1067728	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300026498\|Ga0257156_1132287	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300026515\|Ga0257158_1108463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	552	Open in IMG/M
3300026542\|Ga0209805_1068234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1736	Open in IMG/M
3300026552\|Ga0209577_10446929	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300026664\|Ga0207558_101577	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026684\|Ga0207556_100812	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300026693\|Ga0208709_105487	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300027018\|Ga0208475_1000649	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300027610\|Ga0209528_1022768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1379	Open in IMG/M
3300027727\|Ga0209328_10198907	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300028715\|Ga0307313_10296473	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300028716\|Ga0307311_10233919	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300028793\|Ga0307299_10197531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300028811\|Ga0307292_10224131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300028824\|Ga0307310_10179787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300028884\|Ga0307308_10210147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	932	Open in IMG/M
3300031093\|Ga0308197_10419418	Not Available	529	Open in IMG/M
3300031231\|Ga0170824_117674063	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031446\|Ga0170820_10499824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1115	Open in IMG/M
3300031469\|Ga0170819_16508572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300031469\|Ga0170819_17234467	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031740\|Ga0307468_100911765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300031754\|Ga0307475_10741390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300031754\|Ga0307475_10816471	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031820\|Ga0307473_10234058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1115	Open in IMG/M
3300031820\|Ga0307473_11559565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300031823\|Ga0307478_11083743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	669	Open in IMG/M
3300031833\|Ga0310917_11173236	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031847\|Ga0310907_10736518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	548	Open in IMG/M
3300032180\|Ga0307471_101621859	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300032180\|Ga0307471_103962930	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300032205\|Ga0307472_102433048	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.32%
Host-Associated	Host-Associated	17.07%
Engineered	Engineered	0.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.88%
Plants	Host-Associated → Plants	17.07%
Aquatic	Environmental → Aquatic	2.44%
Modeled	Engineered → Modeled	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.88%
Sediment	Environmental → Aquatic → Sediment	2.44%
Roots	Host-Associated → Plants → Roots	0.61%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.68%
Loam	Environmental → Terrestrial → Soil → Loam	12.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.22%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.61%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.22%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.61%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.44%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.22%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.22%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.22%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.61%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.61%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026664	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-C (SPAdes)	Environmental	Open in IMG/M
3300026684	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-HINK08-E (SPAdes)	Environmental	Open in IMG/M
3300026693	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN595 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03889640	2088090014	Soil	YVTSDGRVIEASKVRKDSKVRVHYVREGDEMIVDKVIVTDTRD
GPIPI_01603130	2088090014	Soil	SDGRVIQPSEIRKDSKVQVHYVKDGDDMLVDKVIVTKTRY
cont_0332.00003120	2166559005	Simulated	TVTYQTADGRVIEPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
E41_10423670	2170459005	Grass Soil	LEILQILVTADGKVIEASKIRKDSKVRVHYVKDGAEMMVDKVIVTQDRD
L02_03294060	2170459007	Grass Soil	FVTSDGRVIEASKIRKDSKVRVHYIKDGDNMVVDKVIVTKVRD
F47_02232370	2170459009	Grass Soil	RYKFSKTVTYQTADGRVIEPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
N56_05407100	2170459012	Grass Soil	YKFSKQVTYVTSDGRVISTFTNTEKNSKVQVHYVKSGDDMLVDKVIVTKTRY
INPgaii200_11595601	2228664022	Soil	KQVTYVTANGRVIDASKIRKDSKVQVHYVKDGDDMLIDKVIVTNDRD
INPhiseqgaiiFebDRAFT_1050376932	3300000364	Soil	NAHGKVIEASKIRKDSKVQVHYLKDGDDMVIDKVIVTPSRD*
F24TB_106426401	3300000550	Soil	VIEASKIRKDSKVRVHYIKQGDDMLVDKVIVSDRD*
JGI1027J12803_1003075601	3300000955	Soil	IEASKVRKDSKVRVHYVREGDEMIVDKVIVTDTRD*
JGI1027J12803_1029690781	3300000955	Soil	IEASKIRKDSKVRVHYVKDGDDMLVDKVIVTKDRD*
JGIcombinedJ43975_101065571	3300002899	Soil	VTADGRVIDASKIRKDSKVQVHYVKDGDDMLIDKVIVTKDRD*
Ga0062590_1029297921	3300004157	Soil	TYVTSDGRVIEASKIRKDSKVRVHYIKDGDNMVVDKVIVTKVRD*
Ga0062592_1024414631	3300004480	Soil	TYVTSDGRVIEASKIRKDSKVRVHYIKDGDNMVIDKVIVTKVRD*
Ga0066688_100607375	3300005178	Soil	QTADGRVIEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTHRD*
Ga0066684_101761131	3300005179	Soil	TYVNANGRVIDASKIRKDSKVQVHYVKDGDDMMVDKVIVTKDRD*
Ga0065705_105056941	3300005294	Switchgrass Rhizosphere	FGKTVTYVTSDGRVIEASKIRKDSKVRVHYIKDGDNMVVDKVIVTKVRD*
Ga0065705_110649261	3300005294	Switchgrass Rhizosphere	VTYVTADGRVIDASKIRKDSKVQVHYVKDGDDMLIDKVIVTKDRD*
Ga0070683_1011274281	3300005329	Corn Rhizosphere	GKQVTYVTSDGRVIQPSEVRKDSKVRVHYVKEGDDMLVDKVIVTKTRY*
Ga0070668_1017151871	3300005347	Switchgrass Rhizosphere	KQVTYVTSDGRVIQPSEVRKDSKVRVHYVKEGDDMLVDKVIVTKTRY*
Ga0070673_1022332462	3300005364	Switchgrass Rhizosphere	GKTVTYVTSDGKVIEASKIRKDSKVHLHYIKDGDDMLVDKVIVTDVRD*
Ga0070708_1007784952	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	YVNAHGKVIEASKIKRDSKVRVHYLKHGNDMVVDKVILTPNRH*
Ga0070708_1008698872	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRYKFHKKVIYMTSDGKVIEASKIRKDSKVRVHYLKDGDDMVVDKVIVTQDRD*
Ga0070678_1006892991	3300005456	Miscanthus Rhizosphere	KFSKQVTYVTSDGRVIEASKIRKDSKVHVHYVKVGDDMVVDKVIVTKNSD*
Ga0070707_1009801751	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTSDGKVIEASKIRKDSKVRVHYIKQGDDMLVDKVIVTEARD*
Ga0070698_1001766834	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	FKFGKTVEFVNAHGKVIETSKITRDSKVRVHFVKQGDDMLVDKVILTPDRH*
Ga0070697_1002228744	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTYVTPDGKVIDASRIKKNSKVRVHYIKEGNDMLVDKVIVTDTD*
Ga0070696_1004448552	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	FSKTVTYQTADGRVIEPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD*
Ga0066700_103451812	3300005559	Soil	VRYKFDKTVTCMTSDAKVIEASKIRKDSKVRVHYIKNDDDMLVDKVIVTQDRD*
Ga0066700_111075232	3300005559	Soil	DGRVIEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTDRD*
Ga0066705_103002993	3300005569	Soil	DGRVIEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTHRD*
Ga0066702_102789231	3300005575	Soil	KFNKTVTYQTADGRVIEASKIRKDSKVRVHYIKSGDDMLVDKVIVTDRD*
Ga0066706_104644433	3300005598	Soil	QTADGRVIEPSKIRKDSKVRVHYLKSGDDVLVDKVIVTDRD*
Ga0070717_113661481	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YKFSKQVTYVTSDGRVIEPSKIRKDSKVQVHYVKDGDDMLIDKVIVTKNRY*
Ga0070717_115508142	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IEASKIRKDSKVRVHYIKDGNDMVVDKVIVTRNRY*
Ga0066656_104956392	3300006034	Soil	TYVNAHGKVIQPSKIRTDSKVRVHWVKQGDDMLVDKVILTPDRH*
Ga0079222_100329714	3300006755	Agricultural Soil	VIDASKIRKDSKVQVHYVKDGDDMMIDKVIVTKDRD*
Ga0066659_111898093	3300006797	Soil	VIEPSKIRKDSKVRVHYMKSGDDMLVDKVIVTDRD*
Ga0075426_109687012	3300006903	Populus Rhizosphere	IEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTDRD*
Ga0079219_123544432	3300006954	Agricultural Soil	VTYVTSDGKVIEASKVTKDSKVRVHYIKDGDEMLVDKVIVTQDRN*
Ga0099791_106406641	3300007255	Vadose Zone Soil	KFGKTVEFVNAHGKVIEASKIRKDSKVHVHYVRHGDDMVVDKVTLTPERH*
Ga0105245_132563341	3300009098	Miscanthus Rhizosphere	SDGKVIEASKVRKDSKVRVHYIKDGDNMLVDKVIVTDVRD*
Ga0105243_118099772	3300009148	Miscanthus Rhizosphere	GKVIEASKVKKNAKVRVHYMKEGSDMMVDKVIVTDNY*
Ga0105241_120127321	3300009174	Corn Rhizosphere	VTPSGKVIEASKVKKNSKVKVHYIKEGDDMVVDKVIVTEVRE*
Ga0126373_101162692	3300010048	Tropical Forest Soil	VTYVTSDGRVIQPSKIRKDSKVQVHYVKDGDDMLIDKVIVTKNRY*
Ga0134082_104739272	3300010303	Grasslands Soil	RVIEPSKIRKDSKVRVHYLKSGDDVLVDKVIVTDRD*
Ga0126372_105499402	3300010360	Tropical Forest Soil	VIQPSKIRKDSKVQVHYVKDGDDMLIDKVIVTKNRY*
Ga0134125_103832371	3300010371	Terrestrial Soil	GRVIEPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD*
Ga0134124_125266491	3300010397	Terrestrial Soil	IEASKIRKDSKVHLHYIKNGDEMLVDKVIVTDVRD*
Ga0134127_117716661	3300010399	Terrestrial Soil	FSKQVTYVTSDGRVIEASKIRKDSKVQVHYVKDGDNMLVDKVIVTKKRY*
Ga0105246_120862851	3300011119	Miscanthus Rhizosphere	FSKTVTYITADGRVIDPSKVTKDSKVRVHYLKSGDDMLVDKVVVTERD*
Ga0120152_10170571	3300012011	Permafrost	AERLAAGKTVTYVTSDGKVIEASKVRKDSKVRVHYLKDGDDMVVDKVIVTRDRD*
Ga0137362_101654371	3300012205	Vadose Zone Soil	TADGRVIEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTDRD*
Ga0150985_1121636043	3300012212	Avena Fatua Rhizosphere	GKVIDSSRVRKDARVRVHYTKEGDDMLVDKVIVTDND*
Ga0137360_100448671	3300012361	Vadose Zone Soil	GKVIEASKIRKDSKVHVHYVRHGDDMVVDKVTLTPERH*
Ga0137360_112855032	3300012361	Vadose Zone Soil	MTSDGKVIEASKIRKNSKVRVHYVKQGDDMLVDKVIVT
Ga0137361_115559222	3300012362	Vadose Zone Soil	YTFSKNVEYVNAHGKVIEASKIRKDSKVRVHFVKQGNDLVVDKVILTPDKH*
Ga0137361_117183032	3300012362	Vadose Zone Soil	IEASKIRKDSKVHVHYVRHGDDMVVDKVTLTPDRH*
Ga0150984_1182835193	3300012469	Avena Fatua Rhizosphere	PDGKVIDSSRVRKDARVRVHYTKEGDDMLVDRVIVTDND*
Ga0137397_103996212	3300012685	Vadose Zone Soil	LSVEYVNADGKVIEPSKIRKDSKVRVHYLKQGDNMVVDKVILTPERH*
Ga0157285_100161442	3300012897	Soil	VIEASKIRKDSKIRVHYIKQGDDMLVDKVIVSDRD*
Ga0157308_102496961	3300012910	Soil	DGRVIQPSKIRKDSKVHVHYVKQGDDMLVDKVIVTQDRD*
Ga0137395_107742081	3300012917	Vadose Zone Soil	KVIEASKIRKDSKVHVHYVRHGDDMVVDKVTLTPDRH*
Ga0137396_108187952	3300012918	Vadose Zone Soil	GKTVTYVTSDGKVVEASKIRKDSKVRVHYIKQGDDMLVDKVIVTDRD*
Ga0137359_117102861	3300012923	Vadose Zone Soil	VIEASKIRKDSKVRVHFVKQGNDLVVDKVILTPDKH*
Ga0164303_109134211	3300012957	Soil	QVTYVTSDGRVIEPSKIRKDSKVQVHYIKEGDDMLVDKVIVTKARY*
Ga0164299_104774461	3300012958	Soil	VTYVNSNGRVIDASKIRKDSKVQVHYVKDGDDMLIDKVIVTKDRD*
Ga0164299_112828571	3300012958	Soil	DGRVIQPSKIRKDSKVQVHYVKEGNDMLVDKVIVTKDRD*
Ga0164302_102684193	3300012961	Soil	SDGRVIQPSKIRKDSKVQVHYVKEGNDMLVDKVIVTKDRD*
Ga0164302_105676923	3300012961	Soil	RVIDASKIRKDSKVQVHYVKDGDDMLIDKVIVTKDRD*
Ga0164302_107470731	3300012961	Soil	RVIDASKIRKDSKVQVHYVKDGDDMLVDKVIVTKDRD*
Ga0164305_117404151	3300012989	Soil	VIEASKIHKDSKVKVHYVREGSDMLVDRVIVDDVD*
Ga0157307_11362981	3300013096	Soil	VASDGRVIEASKIRKDSKIRVHYIKQGDDMLVDRVIVSDRD*
Ga0157378_131948401	3300013297	Miscanthus Rhizosphere	GKVIEASKVKKNSKVRVHYINEGGSQVVDKVIVLDND*
Ga0157372_121794912	3300013307	Corn Rhizosphere	VHYRFSKQVTYVTADGRVIDASKIRKDSKVQVHYVRDGDDMLIDKVIVTKDRD*
Ga0120149_10148541	3300014058	Permafrost	SVNGHGKVIEASKIKKNSKVRVHYLKDGDDMVVDKVIVTRDRD*
Ga0163163_126277351	3300014325	Switchgrass Rhizosphere	TSYKFSKTVTYITADGRVIDTSKVTKDSKVRVHYLKSGDDMLVDKVVVTERD*
Ga0157377_108670621	3300014745	Miscanthus Rhizosphere	YKFSKQVTYVIANGRVIDASKIRKDSKVQVHYVKDGDDMLVDKVIVTKDRD*
Ga0157379_125169561	3300014968	Switchgrass Rhizosphere	GKVIESSTIRKDSKVRVHYVKEGDDMLVDKVIVTETRK*
Ga0157376_104180143	3300014969	Miscanthus Rhizosphere	IEASKIRKDSKVRVHYIKDGDNMLVDKVIVTDVRD*
Ga0137403_108410421	3300015264	Vadose Zone Soil	YVTPDGKVVEASKIKKNSKVRVHYTKEGNDMLVDKVIVTDND*
Ga0132258_104326848	3300015371	Arabidopsis Rhizosphere	PDGRVIQPSTIRKDSKVHVHYVKVGDDMVVDKVIVTKNNE*
Ga0132258_126951661	3300015371	Arabidopsis Rhizosphere	DGRVIEPSKIRKDSKVQVHYIKEGDDMLVDKVIVTKNRY*
Ga0132256_1003622713	3300015372	Arabidopsis Rhizosphere	RVIDASKIRKDSKVQVHYVKDGDDMMIDKVIVTKDRD*
Ga0132256_1009732421	3300015372	Arabidopsis Rhizosphere	FSKQVTYLTADGRVIDASKIRKDSKVQVHYVKDGDDMLIDKVIVTKDRD*
Ga0132255_1036143491	3300015374	Arabidopsis Rhizosphere	QVTNVTSDGRVIQPSNIRKDSKFQVQYVKEGNDMLVDKVIVTKDRD*
Ga0132255_1047977712	3300015374	Arabidopsis Rhizosphere	KQVTYVTSDGRVIQPSEIRKDSKVQVHYVKDGDNMLVDKVIVTKTRY*
Ga0182033_113663602	3300016319	Soil	YVTSDGRVIEPSKIRKDSKVQVHYIKDGDDMLVDKVIVTKARY
Ga0184604_101063971	3300018000	Groundwater Sediment	KFSKTVTYQTADGRVIEASKIKKDSKVRVHYVKDGDDLLVDKVIVTKDRD
Ga0184608_103849321	3300018028	Groundwater Sediment	VTSDGQVIEASKIRKDSKVRVHYIKDGDDMVVDKVIVTRNRD
Ga0066667_111087501	3300018433	Grasslands Soil	PVSDPSKVRTDSKVRVHYIKSRDDMLVDKVIVTDRD
Ga0173482_101259272	3300019361	Soil	DGRAIEPSQIRKDSKVRVHYLKSGNDMLVDKVIVTD
Ga0193707_11091961	3300019881	Soil	FSKTVTYQTADGRVIEPSQIRKDSKVRVHYVKSGNDMLVDKVIVTDRD
Ga0193727_11636261	3300019886	Soil	TADGRVIEPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
Ga0193729_10164463	3300019887	Soil	VTSAGKVIEASKIRKDSKVRVHYAKEGDDMLVDKVIVTQDRD
Ga0193729_10271901	3300019887	Soil	VTYVNAHGKVIEASKIRKDSKVHVHYVRQGDDMVVDKVTLAPDRH
Ga0193729_11368533	3300019887	Soil	KVLEPSKIRKDSKVRVHYIKEGDDMLVDKVIVTDRD
Ga0193728_10683493	3300019890	Soil	GKVIQPSKIKKDSKVRVHFLKQGDNMVVDKVILTPERH
Ga0193731_10072223	3300020001	Soil	LKTEATEPMHYTFSKTVEYVNAHGKVIETSKIKKDSKVRVHFLKQGDNMVVDKVILTPNR
Ga0193735_11672602	3300020006	Soil	FSKEVTYVTAKGRVIDASKIKKDSKVQVHYIKDGDDMLVDKVIVTKHRD
Ga0193732_10692182	3300020012	Soil	RYVASDGQVVEASKIRKDSKVRVHYIKDGDDMVVDKVIVETGNRY
Ga0193721_10572641	3300020018	Soil	VTYVTSDGRVIQPSQIRKDSKVHVHYVKDGDDMLVDKVIVTKNRD
Ga0193745_10895252	3300020059	Soil	FSKQVTYVTSDGRVIQPSKIRKDSKVQVHYVKEGNDMLVDKVIVTKDRD
Ga0210405_1000218516	3300021171	Soil	FGKTVTCVNAHGKVIEASKIRKDSKVHVHYVRHGDDMVIDKVILTPDRH
Ga0193719_100626163	3300021344	Soil	PDGKVIEASKVRKNSKVRVHYIKDGSDMLVDKVIVTDND
Ga0193719_102197001	3300021344	Soil	TYVTSDGQVIEASKIRKDSKVRVHYIKDGDNMVVDKVIVTRDRD
Ga0193719_103677741	3300021344	Soil	TYVTSDGQVIEASKITKDSKVRVHYIKDGDDMVVDKVIVTRNRY
Ga0193750_10809301	3300021413	Soil	MRCKFGKTVTYVTSDERVIEASKIRKDSKVRVHYIRNGDDMVVDKVIVTRDRY
Ga0193695_10171161	3300021418	Soil	DGRVIEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
Ga0210384_102982631	3300021432	Soil	KVIEASTIRKDSKVRVHYIKDGDNMLVDKVIVMPDRD
Ga0210402_105084872	3300021478	Soil	TADGRVIKASKIRKDSKVHVHYIKDNDDMLVDRVTVDQD
Ga0224452_10632922	3300022534	Groundwater Sediment	VTYVTSDGQVIEASKIRKDSKVRVHYIKDGDNMVVDKVIVTRDRD
Ga0222623_100614172	3300022694	Groundwater Sediment	TSDGQVIEASKIRKDSKVRVHYIKDGDNMVVDKVIVTRDRD
Ga0193714_10294791	3300023058	Soil	SDGRVIQPSQIRKDSKVHVHYVKDGDDMLVDKVIVTKDRD
Ga0247693_10617952	3300024181	Soil	QVKYVTSDGRVIEASKIRKDSKVQVHYVKEGDDMLVDKVIVTKARY
Ga0207666_10566801	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	ARYKFSKTVTYQTADGRVIQPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
Ga0207673_10524991	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	ADGHVVEASRIKKDSKVHVHYVRDNDDMLVDRIVVDQD
Ga0207692_106728411	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	YVTSDGRVIEPSKIRKDSKVQVHYIKDGDDMLIDKVIVTKARY
Ga0207684_103624783	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AEPMHYTFSKNVEYVNAHGKVIEASKIRKDSKVHVHFVKQGNDMVVDKVILTPDRH
Ga0207693_109018471	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTSDGRVIEPSKIRKDSKVQVHYIKEGDDMLVDKVIVTKARY
Ga0207652_111698491	3300025921	Corn Rhizosphere	FSKTVTYQTADGRVIEPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
Ga0207646_116268041	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GKVIEASKIRKDSKVHVHCVRHGADMVVDKVTLTPERH
Ga0207659_112084962	3300025926	Miscanthus Rhizosphere	VIEASKIRKDSKVRVHYIKQGDDMLVDKVIVTQDRD
Ga0207706_116330121	3300025933	Corn Rhizosphere	HGKVIEASKIRKDSKVQVHYLKDGDDMVIDKVIVTPSRD
Ga0207665_100002795	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VIDASRIKKNSKVRVHYIKEGNDMLVDKVIVTDTD
Ga0207651_116990282	3300025960	Switchgrass Rhizosphere	DGRVIEPSQIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
Ga0207668_109971431	3300025972	Switchgrass Rhizosphere	VTADGHVIEASRIKKDSKVHVHYVRDNDDMLVDRIVVDQD
Ga0207648_102851712	3300026089	Miscanthus Rhizosphere	KVIEASKIRKDSKVKVHYIKEGDDMVIDKVIVTEVRD
Ga0209802_10400611	3300026328	Soil	ATEPMHYTFNKNVEYVNAHGKVIEASKIRKDSKVRVHFVKQGNDLVVDKVILTPDKH
Ga0209377_10366001	3300026334	Soil	NVEFVNAHGKVIEASKIRKDSKVRVHFVKQGNDLVVDKVILTPDKH
Ga0257146_10677282	3300026374	Soil	PVRYKFSKQVTYVTSDGRVIQPSKIRKDSKVQVHYVKEGNDMLVDKVIVTKDRD
Ga0257156_11322871	3300026498	Soil	VTYQTADGRVIEPSKIRKDSKVRVHYLKSGDDMLVDKVIVTDRD
Ga0257158_11084633	3300026515	Soil	FGKSVTYLNANGKVINASKIRKDRKVRVHYVKEGNDMLVDKVTVVKD
Ga0209805_10682345	3300026542	Soil	GRVIEPSKIRKDSKVRVHYLKSGDDVLVDKVIVTDRD
Ga0209577_104469292	3300026552	Soil	KVIEASKIRKDSKVHVHYVRHGDDMVVDKVTLTPDRH
Ga0207558_1015772	3300026664	Soil	TADGRVIDASKIRKDSKVQVHYVKDGDDMLIDKVIVTKDRD
Ga0207556_1008121	3300026684	Soil	SKTVTYVTADGRVIEPSKIRKDSKVHVHYIKDGDDMLVDKVIVTKDRD
Ga0208709_1054872	3300026693	Soil	VTSDGRVIEASKIRKDSKVRVHYIKQGDDMLVDKVIVSDRD
Ga0208475_10006491	3300027018	Soil	VIEASKIRKDSKIRVHYIKQGDDMLVDKVIVSDRD
Ga0209528_10227681	3300027610	Forest Soil	VTYVTSDGQVIEPSQIRRDSKVRVHYMKEGDDMVVDKVIVTRDRD
Ga0209328_101989071	3300027727	Forest Soil	RVIEASKIRKDSKVRVHYLKEGNDMVVDKVIVTQDRD
Ga0307313_102964731	3300028715	Soil	TSDGRVIEASKIRKDSKVRVHYIKQGDDMLVDKVIVTDVRD
Ga0307311_102339192	3300028716	Soil	SDGQVIEASKIRKDSKVRVHYIKDGDDMVVDKVIVTRNRY
Ga0307299_101975311	3300028793	Soil	DGRVIEPSQIRKDSKVRVHYLKSGNDMLVDKVIVTD
Ga0307292_102241311	3300028811	Soil	VTSDGRVIQPSQIRKDSKVHVHYVKNGDDMLVDKVIVTNDRD
Ga0307310_101797873	3300028824	Soil	QVTYVTSDGRVIQPSQIRKDSNVRVHYVKEGDDMLVDKVIVTKTRD
Ga0307308_102101472	3300028884	Soil	YVTSDGQVIEASKIRKDSKVRVHYIKDGDDMVVDKVIVTRNRY
Ga0308197_104194181	3300031093	Soil	VTYVTPDGKVIEASRVKKNAKVRVHYMREGSDMLVDRVIVTDND
Ga0170824_1176740631	3300031231	Forest Soil	SKQVTYVTSDGRVIQPSKIRKDSKVQVHYVKEGNDMLVDKVIVTKERD
Ga0170820_104998242	3300031446	Forest Soil	VEPVRYKFSKQVTYVTSDGRVIQPSKIRKDSKVQVHYVKEGNDMLVDKVIVTKDRD
Ga0170819_165085721	3300031469	Forest Soil	SDGRVIQPSEIRKDSKVQVHYVKDGDNILVDKVIVTKTRY
Ga0170819_172344672	3300031469	Forest Soil	GKTVTYVTSDGQVIEASKIRKDSKVRVHYIKDGDDMVIDKVIVTRNRY
Ga0307468_1009117652	3300031740	Hardwood Forest Soil	AYVNAHGKVIEASKIRKDSKVQVHYLKDGDDMVIDKVIVTPSRD
Ga0307475_107413901	3300031754	Hardwood Forest Soil	KAVTYVTSDGKVIDASKIRKNSKVRVHYVKQGDDMLVDKVIVTQDRD
Ga0307475_108164712	3300031754	Hardwood Forest Soil	AHGKVIEASKIRKDSKVHVHFVRHGDDMVVDKVTLTPDRH
Ga0307473_102340582	3300031820	Hardwood Forest Soil	TVTYMTSDGKVIDASKIRKNSKVRVHYVKQGDDMLVDKVIVTQDRD
Ga0307473_115595652	3300031820	Hardwood Forest Soil	IQPSKIRKDSKVHVHYVKDGDDILVDKVIVTKNRD
Ga0307478_110837432	3300031823	Hardwood Forest Soil	HGKVIEASKIRKDSKVRVHYVKQGDDMVVDKVILTPDRH
Ga0310917_111732361	3300031833	Soil	TYVTSDGRVIEPSKIRKDSKVQVHYIKDGDDMLVDKVIVTKNRY
Ga0310907_107365182	3300031847	Soil	KQVTYVTSDGRVIEPSQIRKDSKVQVHYIKNGDDMLVDKVIVTKNRY
Ga0307471_1016218593	3300032180	Hardwood Forest Soil	KTVEFVNAHGKVIEASKIRKDSKVHVHYVRHGDDMVVDKVTLTPDRH
Ga0307471_1039629301	3300032180	Hardwood Forest Soil	SDGKVIEASTIKKDSKVRVHYIKNGDDMLVDKVIVTQDRY
Ga0307472_1024330481	3300032205	Hardwood Forest Soil	NVTYVTADGKVVEASKIRKDSRVRVHYIKEGNDMLVDKVIVSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039084

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences