Metagenome / Metatranscriptome Family F041285

Basic Information
Family ID	F041285
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	81 residues
Representative Sequence	MPSSLQLVSEQFPHLRERVACLFERNEIFRELCEDYETCADALARQPASDGLRREYSALRLRLETELLRYLHEDAEPPVHRK
Number of Associated Samples	115
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.62 %
% of genes near scaffold ends (potentially truncated)	18.12 %
% of genes from short scaffolds (< 2000 bps)	90.62 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Bacteria (56.875 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (21.875 % of family members)
Environment Ontology (ENVO)	Unclassified (33.125 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (33.750 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.91% β-sheet: 0.00% Coil/Unstructured: 39.09%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.9.2: VBS domain	d2b0ha1	2b0h	0.69652
f.56.1.1: MAPEG domain	d2uuia1	2uui	0.69642
a.48.1.1: N-terminal domain of cbl (N-cbl)	d3buxb2	3bux	0.69124
a.24.9.1: alpha-catenin/vinculin	d1dova_	1dov	0.69124
a.24.9.1: alpha-catenin/vinculin	d1st6a4	1st6	0.68367

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00206	Lyase_1	38.75
PF00710	Asparaginase	5.00
PF01116	F_bP_aldolase	3.12
PF13520	AA_permease_2	2.50
PF10415	FumaraseC_C	1.88
PF04055	Radical_SAM	1.88
PF01103	Omp85	1.88
PF01740	STAS	1.25
PF01699	Na_Ca_ex	1.25
PF01627	Hpt	0.62
PF00939	Na_sulph_symp	0.62
PF01381	HTH_3	0.62
PF02417	Chromate_transp	0.62
PF00246	Peptidase_M14	0.62
PF07690	MFS_1	0.62
PF07963	N_methyl	0.62
PF13353	Fer4_12	0.62
PF13590	DUF4136	0.62
PF00924	MS_channel	0.62
PF07885	Ion_trans_2	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	10.00
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	3.12
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	1.25
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	1.25
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.62
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.62
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.62
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.62
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.62

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.88 %
Unclassified	root	N/A	43.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.88 %
Unclassified	root	N/A	43.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.88 %
Unclassified	root	N/A	43.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.00 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.62 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	5.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.38 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.75 %
unclassified Holophagae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae	0.62 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	5.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.38 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.75 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.62 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	5.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.38 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.75 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.62 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	5.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.38 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.75 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.62 %
Holophagae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	0.62 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.62 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101782732	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300001213\|JGIcombinedJ13530_102384429	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300001213\|JGIcombinedJ13530_105685530	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300001213\|JGIcombinedJ13530_106269581	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300001213\|JGIcombinedJ13530_108808530	Not Available	643	Open in IMG/M
3300002243\|C687J29039_10256524	Not Available	607	Open in IMG/M
3300003861\|Ga0031654_10218983	Not Available	547	Open in IMG/M
3300004020\|Ga0055440_10017200	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300004049\|Ga0055493_10059236	Not Available	745	Open in IMG/M
3300004052\|Ga0055490_10178706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	635	Open in IMG/M
3300004058\|Ga0055498_10083510	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300004061\|Ga0055487_10046151	Not Available	693	Open in IMG/M
3300004155\|Ga0066600_10376036	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300004481\|Ga0069718_16228849	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300004481\|Ga0069718_16327678	All Organisms → cellular organisms → Bacteria → Proteobacteria	5635	Open in IMG/M
3300005332\|Ga0066388_107785965	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005764\|Ga0066903_100928063	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300006224\|Ga0079037_100216962	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300006224\|Ga0079037_101746805	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006605\|Ga0074057_12142274	Not Available	619	Open in IMG/M
3300006844\|Ga0075428_100866954	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300006845\|Ga0075421_100731319	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300006847\|Ga0075431_101210057	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300006969\|Ga0075419_11112732	Not Available	579	Open in IMG/M
3300009053\|Ga0105095_10076071	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300009075\|Ga0105090_10678032	Not Available	626	Open in IMG/M
3300009082\|Ga0105099_10151339	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300009085\|Ga0105103_10853494	Not Available	531	Open in IMG/M
3300009087\|Ga0105107_10337912	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300009091\|Ga0102851_10071590	All Organisms → cellular organisms → Bacteria	2888	Open in IMG/M
3300009091\|Ga0102851_10256298	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300009091\|Ga0102851_11753143	Not Available	699	Open in IMG/M
3300009091\|Ga0102851_12013289	Not Available	654	Open in IMG/M
3300009091\|Ga0102851_12184718	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009094\|Ga0111539_11574806	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300009100\|Ga0075418_11433518	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300009111\|Ga0115026_11139712	Not Available	632	Open in IMG/M
3300009131\|Ga0115027_10225674	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300009146\|Ga0105091_10277276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300009146\|Ga0105091_10678159	Not Available	538	Open in IMG/M
3300009157\|Ga0105092_10448724	Not Available	736	Open in IMG/M
3300009166\|Ga0105100_10051873	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300009166\|Ga0105100_10337509	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300009167\|Ga0113563_10422272	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300009167\|Ga0113563_10880347	Not Available	1021	Open in IMG/M
3300009167\|Ga0113563_12577997	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009170\|Ga0105096_10440415	Not Available	674	Open in IMG/M
3300009171\|Ga0105101_10596290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	548	Open in IMG/M
3300009179\|Ga0115028_10749623	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300009179\|Ga0115028_11392330	Not Available	589	Open in IMG/M
3300009455\|Ga0114939_10464744	Not Available	552	Open in IMG/M
3300009609\|Ga0105347_1340744	Not Available	637	Open in IMG/M
3300009873\|Ga0131077_10093864	All Organisms → cellular organisms → Bacteria	3682	Open in IMG/M
3300009873\|Ga0131077_10132162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2873	Open in IMG/M
3300010359\|Ga0126376_12585430	Not Available	556	Open in IMG/M
3300010400\|Ga0134122_10183138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1726	Open in IMG/M
3300011340\|Ga0151652_10464788	Not Available	577	Open in IMG/M
3300011407\|Ga0137450_1114328	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300011413\|Ga0137333_1105362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	655	Open in IMG/M
3300011415\|Ga0137325_1045221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	927	Open in IMG/M
3300011440\|Ga0137433_1098871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300012039\|Ga0137421_1213326	Not Available	564	Open in IMG/M
3300012171\|Ga0137342_1139992	Not Available	515	Open in IMG/M
3300012931\|Ga0153915_12227980	Not Available	641	Open in IMG/M
3300012964\|Ga0153916_10306123	All Organisms → cellular organisms → Bacteria → Acidobacteria	1627	Open in IMG/M
3300012964\|Ga0153916_11023803	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300012964\|Ga0153916_11642992	Not Available	716	Open in IMG/M
3300014315\|Ga0075350_1214017	Not Available	514	Open in IMG/M
3300014868\|Ga0180088_1011035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1325	Open in IMG/M
3300014875\|Ga0180083_1066884	Not Available	758	Open in IMG/M
3300014881\|Ga0180094_1025256	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300015252\|Ga0180075_1035159	Not Available	783	Open in IMG/M
3300015259\|Ga0180085_1182471	Not Available	630	Open in IMG/M
3300015371\|Ga0132258_11284987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1849	Open in IMG/M
3300015372\|Ga0132256_101545481	Not Available	774	Open in IMG/M
3300017966\|Ga0187776_11114625	Not Available	587	Open in IMG/M
3300018032\|Ga0187788_10227848	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300018059\|Ga0184615_10068053	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300018059\|Ga0184615_10199061	Not Available	1127	Open in IMG/M
3300018064\|Ga0187773_10607100	Not Available	669	Open in IMG/M
3300018081\|Ga0184625_10024706	All Organisms → cellular organisms → Bacteria	2902	Open in IMG/M
3300021090\|Ga0210377_10133632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1632	Open in IMG/M
3300021090\|Ga0210377_10432435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → unclassified Holophagae → Holophagae bacterium	774	Open in IMG/M
3300025155\|Ga0209320_10194403	Not Available	884	Open in IMG/M
3300025174\|Ga0209324_10180729	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300025318\|Ga0209519_10580733	Not Available	619	Open in IMG/M
3300026118\|Ga0207675_100120872	All Organisms → cellular organisms → Bacteria → Proteobacteria	2478	Open in IMG/M
3300027675\|Ga0209077_1082632	Not Available	885	Open in IMG/M
3300027713\|Ga0209286_1085331	Not Available	1178	Open in IMG/M
3300027723\|Ga0209703_1264727	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300027731\|Ga0209592_1215311	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300027841\|Ga0209262_10059804	Not Available	1731	Open in IMG/M
3300027841\|Ga0209262_10186331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1001	Open in IMG/M
3300027871\|Ga0209397_10193606	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300027877\|Ga0209293_10114592	Not Available	1239	Open in IMG/M
3300027877\|Ga0209293_10296583	Not Available	820	Open in IMG/M
3300027887\|Ga0208980_10179706	Not Available	1237	Open in IMG/M
3300027887\|Ga0208980_10381923	Not Available	813	Open in IMG/M
3300027887\|Ga0208980_10411914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	779	Open in IMG/M
3300027890\|Ga0209496_10247716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	871	Open in IMG/M
3300027900\|Ga0209253_10024748	All Organisms → cellular organisms → Bacteria → Acidobacteria	5042	Open in IMG/M
3300027900\|Ga0209253_10053979	All Organisms → cellular organisms → Bacteria	3331	Open in IMG/M
3300027902\|Ga0209048_10018163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	6146	Open in IMG/M
3300027902\|Ga0209048_10771814	Not Available	629	Open in IMG/M
3300027909\|Ga0209382_10832187	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300028803\|Ga0307281_10345318	Not Available	562	Open in IMG/M
3300031834\|Ga0315290_10251609	All Organisms → cellular organisms → Bacteria → Acidobacteria	1542	Open in IMG/M
3300031834\|Ga0315290_10723356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	856	Open in IMG/M
3300031908\|Ga0310900_10327755	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300031944\|Ga0310884_10860568	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031949\|Ga0214473_11697454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	629	Open in IMG/M
3300032075\|Ga0310890_11260007	Not Available	604	Open in IMG/M
3300032143\|Ga0315292_10555809	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300032211\|Ga0310896_10609875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300032275\|Ga0315270_11083178	Not Available	532	Open in IMG/M
3300032342\|Ga0315286_11290909	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300032401\|Ga0315275_10476948	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300032401\|Ga0315275_12062889	Not Available	600	Open in IMG/M
3300032770\|Ga0335085_10054200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	5397	Open in IMG/M
3300032828\|Ga0335080_10059949	All Organisms → cellular organisms → Bacteria	4211	Open in IMG/M
3300032955\|Ga0335076_10306471	Not Available	1476	Open in IMG/M
3300033004\|Ga0335084_10430768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1357	Open in IMG/M
3300033004\|Ga0335084_11418972	Not Available	688	Open in IMG/M
3300033408\|Ga0316605_11382897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300033408\|Ga0316605_11875403	Not Available	583	Open in IMG/M
3300033413\|Ga0316603_10429729	Not Available	1200	Open in IMG/M
3300033413\|Ga0316603_11156838	Not Available	732	Open in IMG/M
3300033413\|Ga0316603_11242116	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300033414\|Ga0316619_10454328	Not Available	1031	Open in IMG/M
3300033414\|Ga0316619_10699288	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300033414\|Ga0316619_11112705	Not Available	693	Open in IMG/M
3300033416\|Ga0316622_100551311	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300033416\|Ga0316622_100674286	All Organisms → cellular organisms → Bacteria → Acidobacteria	1194	Open in IMG/M
3300033416\|Ga0316622_102435258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	604	Open in IMG/M
3300033418\|Ga0316625_100655678	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300033418\|Ga0316625_102462220	Not Available	525	Open in IMG/M
3300033419\|Ga0316601_101479708	Not Available	684	Open in IMG/M
3300033433\|Ga0326726_10815693	Not Available	903	Open in IMG/M
3300033433\|Ga0326726_11116019	Not Available	767	Open in IMG/M
3300033434\|Ga0316613_10101561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1754	Open in IMG/M
3300033480\|Ga0316620_10028003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3518	Open in IMG/M
3300033480\|Ga0316620_12365157	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300033482\|Ga0316627_100691861	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300033482\|Ga0316627_101383540	Not Available	706	Open in IMG/M
3300033483\|Ga0316629_11277888	Not Available	590	Open in IMG/M
3300033485\|Ga0316626_11586435	Not Available	590	Open in IMG/M
3300033486\|Ga0316624_10098956	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300033486\|Ga0316624_12198080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	513	Open in IMG/M
3300033487\|Ga0316630_10666839	Not Available	877	Open in IMG/M
3300033487\|Ga0316630_11316420	Not Available	645	Open in IMG/M
3300033489\|Ga0299912_10787687	Not Available	729	Open in IMG/M
3300033489\|Ga0299912_11024410	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300033513\|Ga0316628_101000375	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300033513\|Ga0316628_101153102	Not Available	1031	Open in IMG/M
3300033521\|Ga0316616_102748666	Not Available	662	Open in IMG/M
3300033521\|Ga0316616_104448048	Not Available	527	Open in IMG/M
3300033557\|Ga0316617_102699946	Not Available	517	Open in IMG/M
3300034077\|Ga0373899_057298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	506	Open in IMG/M
3300034081\|Ga0373911_022437	Not Available	1028	Open in IMG/M
3300034147\|Ga0364925_0003951	All Organisms → cellular organisms → Bacteria → Acidobacteria	4238	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.25%
Host-Associated	Host-Associated	6.25%
Engineered	Engineered	2.50%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	54.37%
Terrestrial	Environmental → Terrestrial	36.88%
Plants	Host-Associated → Plants	6.25%
Wastewater	Engineered → Wastewater	1.25%
Bioremediation	Engineered → Bioremediation	1.25%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	36.88%
Soil	Environmental → Terrestrial → Soil	35.00%
Sediment	Environmental → Aquatic → Sediment	9.38%
Marine	Environmental → Aquatic → Marine	8.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Peat	Environmental → Terrestrial → Peat	1.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.25%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.25%
Metal	Engineered → Bioremediation → Metal	1.25%
Floodplain	Environmental → Terrestrial → Floodplain	0.62%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	17.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.38%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.75%
Lake	Environmental → Aquatic → Freshwater → Lake	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.38%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.12%
Pond	Environmental → Aquatic → Freshwater → Pond	1.88%
Loam	Environmental → Terrestrial → Soil → Loam	1.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.25%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.25%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.25%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	24.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	17.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.75%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	5.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.38%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.12%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.12%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.50%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.25%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.25%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.25%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	21.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.00%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.50%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	6.25%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	5.00%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	5.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.38%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.12%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.12%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.50%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.25%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.25%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.25%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.25%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.25%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.62%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034077	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.3	Engineered	Open in IMG/M
3300034081	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.3	Engineered	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1017827322	3300001213	Wetland	MTPCLQLVSEQFPHLRERVACLFERDEIFRELCEDYETCAQALSQQERNEDLRREYSALRLRLETELLAYMQEAEHPHARK*
JGIcombinedJ13530_1023844292	3300001213	Wetland	MPSSLHLVSEQFPHLRDRVTCLFERNEIFRELCEDYETCTSALARQPASGALRHEYSALQLRLETELLGYLREDVEPGAHRK*
JGIcombinedJ13530_1056855302	3300001213	Wetland	MTPSLQLVSEQFPLLRGRVACLFERDPIFRELCEDYEACTQALSQQERNADLKREYAALQLRLETELLAYVRETEQPRARK*
JGIcombinedJ13530_1062695812	3300001213	Wetland	MTTALQLVAEHFPLVRDQVASLFERDQIFRELCDDYEACSQALGRQTSCEGLQREFTALRLRLETELLRYVQDVEDRGIRK*
JGIcombinedJ13530_1088085302	3300001213	Wetland	MTSSLQLVSEQFPLLRERAALVFECDPVFRELCDDYETCLHALDLQQSSLALHHEYSALRLRLETELLGYLEPANLDQYP
C687J29039_102565242	3300002243	Soil	MSSCLQLVTEQFPHLRDRVACLFDRDLLFRELCEDYESCSVALARQKGSEGLQREYELLRLRLETELLRFLHEDAETPSGRK*
Ga0031654_102189831	3300003861	Freshwater Lake Sediment	MTSSLRLVSEQFPDLRERVAFLFERDPIFRELCEDYEVCAQALSRQQASEALGREYAALRLRIETE
Ga0055440_100172001	3300004020	Natural And Restored Wetlands	VARQATMSSCLNLINRQFPHLRDQVACLFERNVVFRELCEDYETCTQALARQETAEPLRREYVALQLRLETELLQHLQDDADPPGRRK*
Ga0055493_100592362	3300004049	Natural And Restored Wetlands	MSSCLHLVSDQFPHLRDRVACLFGRDPLFRELCEDYETCAVALARQETSLGLQREYQVLRLRLETELLRFLDEDETAAGRK*
Ga0055490_101787061	3300004052	Natural And Restored Wetlands	MSSCLRLVTEQFPNLRERVAFLFGRDEIFRELCEDYEACTSALAAQPASDALRREYAALQLRLETELLRYVDEGGGLD*
Ga0055498_100835102	3300004058	Natural And Restored Wetlands	ATMSSCLQLVSEQFPHLRERVACLFAQNQLFRELCEDYQACSEALARQKGTEGLQREYTLLRLRLETEVLRFLHEDTEASGRKA*
Ga0055487_100461511	3300004061	Natural And Restored Wetlands	CGMQATMSSCLHLVSDQFPHLRDRVACLFGRDPLFRELCEDYETCAVALARQETSLGLQREYQVLRLRLETELLRFLDEDETAAGRK*
Ga0066600_103760361	3300004155	Freshwater	MPSSLQRVSEQFPHLRERVACLFERNEIFRELCEDYETCADVLARQHASEGLRREYAALQLRLETELLKYLHEDAEPPVDSK*
Ga0069718_162288492	3300004481	Sediment	MTPSLQRVSDQFPHIRERVACLFERDDIFRELCDDYEVCAEALARQESNKDLQREYAALRLRLETELLGYLQEAEHPHARK*
Ga0069718_163276782	3300004481	Sediment	MTRSLQLVSEQFPHLRERAALVFECDPVFRELCDDYEACVNALDLQQASLALHHEYSALRLRLETELLGYLGDANLVRTAK*
Ga0066388_1077859652	3300005332	Tropical Forest Soil	MTTCLDLVSEQFPHLKDRVATLFKTDAVFRELCEDYETCTVTLTRQTTQELRREYSALRLRLETELLAYLHEDSDPPSRRK*
Ga0066903_1009280632	3300005764	Tropical Forest Soil	MTTCLDLVSEQFPHLKERVATLFKTDAVFRELCEDYETCTLTLTRQTTQELRREYSALRLRLETELLAYLHEDSDPPSRRK*
Ga0079037_1002169622	3300006224	Freshwater Wetlands	MPSSLQLVSEQFPHLRERVACLFERNELFRELCEDYEACAGALAGQPAAEGLRREYGALRLRLETELLQYLREDVESPVHPK*
Ga0079037_1017468051	3300006224	Freshwater Wetlands	PSLQRVSDQFPHLRERVACLFESDEVFRELCDDYEACAEALVRQETNEDLKREYAALRLRLETELLGYLQEAEPPYARK*
Ga0074057_121422741	3300006605	Soil	MSSCLRLVSEQFPHLHDRVAWLFDREPLFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFLHDAAVKPGGGN*
Ga0075428_1008669542	3300006844	Populus Rhizosphere	MSSCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFLHDAAVKPGGSN*
Ga0075421_1007313191	3300006845	Populus Rhizosphere	MSPCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFLHDAAVKPGGSN*
Ga0075431_1012100571	3300006847	Populus Rhizosphere	MSSSLQLVSEQFPHLMDRVASLFDGDPVFRELCDDYEACTNALARPPASAGLRQEYAALQLRLETELLGFLNADAANFGRRK*
Ga0075419_111127322	3300006969	Populus Rhizosphere	CYFRRTARAGSLQSAGHMSSCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFLHDAAVKPGGSN*
Ga0105095_100760713	3300009053	Freshwater Sediment	LQAAHDTSLQRVSEQFPHLRERVACLFERDEIFRELCEDYEACARALSQQDRNEDLRREYAALRLRLETELLGYLREAEHPHTRK*
Ga0105090_106780322	3300009075	Freshwater Sediment	MPSSLQLVIEQFPHLRERVACLFERNEIFRELCEDYETCAEARVRPPVSEALRQEYAALQLRLETELLRFLHEDADPTVHRT*
Ga0105099_101513392	3300009082	Freshwater Sediment	MTQSLQLVSEQFPRLRERVACLFERDEIFRELCEDYEACARALSQQDRNEDLRREYAALRLRLETELLGYLHEAEEPRTRR*
Ga0105103_108534942	3300009085	Freshwater Sediment	MSTCLQLVSEQFPHLRERVARLFAGEPVFRELCEDYEACTNALARQPASHGLRQEYAALQLRLETELLRFLNEDAESRGRRK*
Ga0105107_103379122	3300009087	Freshwater Sediment	MTPSLQRVSDQFPHLRERVACLFDRDEIFRELCEDYEACARALSEQERNEDLRREYAALRLRLETELLGYLHEAEEPRTRR*
Ga0102851_100715904	3300009091	Freshwater Wetlands	MTPSLQLVSDQFPHLRERVACLFERDEIFRELCEDYETCAQALSRQESNEGLRHEYAALRLRLETELLSYLHEAEEPRVRK*
Ga0102851_102562982	3300009091	Freshwater Wetlands	MPSSLQLVSEQFPHLRERVACLFERNELFRELCEDYEACAGALAGQPATEGLRREYGALRLRLETELLQYLREDVESPVHPK*
Ga0102851_117531432	3300009091	Freshwater Wetlands	MPSSLQLVSEQFPHLRERVACLFERNEIFRELCEDYETCADALARQPASDGLRREYSALRLRLETELLRYLHEDAEPPVHRK*
Ga0102851_120132892	3300009091	Freshwater Wetlands	MTPSLQRVSDQFPHLRERVACLFERDEIFRELCDDYEVCAEALARQESNEDLKREYAALRLRLETELLGYLQEAEPPYSRK*
Ga0102851_121847181	3300009091	Freshwater Wetlands	MTPSLQRVSEQFPHLRERVACLFERDDIFRELCDDYETCAQALSRQERNEDLRREYSALRLRLETELLAYVQEAEQPRARE*
Ga0111539_115748062	3300009094	Populus Rhizosphere	MSSCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFMHDAAVKPGGNN*
Ga0075418_114335182	3300009100	Populus Rhizosphere	MSSCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFLHDAAVKPGGSS*
Ga0115026_111397121	3300009111	Wetland	MTPSLQLVSDQFPHLRERVACLFERDEIFRELCEDYETCAQALSRQESNEGLRHEYAALRLRLETELLGYLHEAEEPRVRK*
Ga0115027_102256742	3300009131	Wetland	MPSSLQLVSEQFPHLRERVACLFERDEIFRELCEDYETCADALARQPASEGLRREYSALRLRLETELLQYLREDAEPPPHRT*
Ga0105091_102772761	3300009146	Freshwater Sediment	QASMSTCLQLVSEQFPHLRERVASLFAGDPVFRELCEDYEVCTNALARQPASHGLRQEYAALQLRLETELLGFLNEDAETSGRRK*
Ga0105091_106781592	3300009146	Freshwater Sediment	MTPSLQRVSDQFPHLRERVACLFERDEIFRELCEDYEVCAQALSQQRRNEDLRREYSALRLRLETELLGYLQEAERPHPRK*
Ga0105092_104487242	3300009157	Freshwater Sediment	MTPSLQRVSDQFPHLRERVACLFERDEIFRELCEDYEVCAQALSQQRRNEDLRREYAALRLRLETELLGYLREAEDPHPPK*
Ga0105100_100518734	3300009166	Freshwater Sediment	MAASLQRFCGQFPRLRELVACLFDRDEIFRELCEDYEACARALSEQERNEDLRREYAALRLRLETELLGYLHEAEEPRTRR*
Ga0105100_103375092	3300009166	Freshwater Sediment	MTPSLQRVSEQFPHLRERVACLFERDEIFRELCDDYEACAQALSQQERNEDLRREYAALRLRLETELLGYLREAEHPHTRK*
Ga0113563_104222722	3300009167	Freshwater Wetlands	MPSSLQLVSEQFPHLRERVACLFEREETFRELCEDYEACTLALGRQESDEGLKREYSALRLRLETELLGYLRQDAHSPVHRHQ*
Ga0113563_108803472	3300009167	Freshwater Wetlands	MTPSLQRVSDQFPHLRERVACLFERDDIFRELCDDYEVCAEALARQESNEDLKREYAALRLRLETELLGYLQEAEHPHART*
Ga0113563_125779972	3300009167	Freshwater Wetlands	MTPSLQRVSEQFPHLRERVACLFERDEIFRELCDDYEVCAQALSRQERNEDLRREYSALRLRLETELLAYVQEAEQPRARE*
Ga0105096_104404152	3300009170	Freshwater Sediment	MPSSLQLVSEQFPHLRERVACLFERNEIFRELCEDYETCAEARVRPPVSEALRQEYAALQLRLETELLRFLHEDADPTVHRT*
Ga0105101_105962902	3300009171	Freshwater Sediment	MTPSLQRVSEQFPHLRERVACLFERDEIFRELCEDYEACARALSQQDRNEDLRREYAALRLRLETELLGYLHEAEEPRTRR*
Ga0115028_107496232	3300009179	Wetland	MPSSLQLVSEQFPHLRERVACLFEREEIFRELCEDYETCADALARQPANEGLCREYSALRLRLETELLRYLCEDVEPPVHRK*
Ga0115028_113923301	3300009179	Wetland	MPSSLQRISEQFPHLRERVACLYEREELFRELCEDYETCADALARQPASADLRREYAALQLRLETELLRYLHEDAEPPVHRKSESKETT*
Ga0114939_104647441	3300009455	Groundwater	QFPHLRERVACLFEREEIFRELCEDYEACTLALGRQGANEGLKREYSALRLRLETELLGYLGQDAQSPVHRQQ*
Ga0105347_13407441	3300009609	Soil	MSSCLRLVSEQFPLLHDRVGWLFESEPLFRELCEDYEACRLALDRHETAEALMREYSALRLRLETELLRFLHDAAVKPGGSN*
Ga0131077_100938644	3300009873	Wastewater	MIPSLEVVSRQFPHLRERVACLFDRDDVFRELCDDYAVCAEALAQQPASEGLRREYTALRLRLETELLEYMNDSERRGDRD*
Ga0131077_101321623	3300009873	Wastewater	MPSCLQLVTEQFPHLRERVTCLFDKDPVFHELCEDYEVCTKALAQQPSSPGLREEYAALQLRLETELLRHLDENPVGRPPGARRPG*
Ga0126376_125854301	3300010359	Tropical Forest Soil	MTTCLDLVSEQFPHLKDRVATLFKTDAVFRELCEDYETCTVTLTRQTGQELRREYSALRLRLETELLAYLHEDTDPPSRRK*
Ga0134122_101831382	3300010400	Terrestrial Soil	VAQGILHTAATMSNCLQLVREQFPHLQDRVLWLFERAPLFRELCEDYEACALALGRQKASEALQREYQALRLRLETELLRFLHEDADK*
Ga0151652_104647882	3300011340	Wetland	MTSSLQLVTEQFPLVRDRVASLFESDDVFRELCDDYETCSQALGRQTASEGLQRELGALRLRLETELLRYVQDVERLGIRK*
Ga0137450_11143282	3300011407	Soil	MTSALQLVSEQFPLLRERVACLFERDELFRELCEDYESCANALAGQPASEGLRREYSALRLRLETELLRYLHEDAEPPVHPT*
Ga0137333_11053622	3300011413	Soil	MASSLQLVSEQFPHLRERVACLFERNEIFRELCEDYEACTDALAGRPASEGLRREYSVLQLRLETELLRYVREDAEPPVHQK*
Ga0137325_10452212	3300011415	Soil	MSTCLKLVSEQFPYLIDRVAILFEGDPVFRELCEDYEACTNALARQPASDGLRQEYAALQLRLETELLGFLNADADKIGRRK*
Ga0137433_10988712	3300011440	Soil	MMFTCLQLVSEQFPHLSDRVASLFEGDTVFRELCEDYEACTNALARQPASAGLRQEYAALQLRLETELLGFLNADAVNSSRQK*
Ga0137421_12133262	3300012039	Soil	MASSLQLVTEQFPHLRERVACLFERDELFRDLCEDYEACTDALAGRPASEGLRREYSVLQLRLETELLRYVREDAEPPVHQK*
Ga0137342_11399922	3300012171	Soil	MTSSLQLVSEQFPSLRERVACLFERDELCRDLCEDYEACTDALAGRPASEGLRREYSVLQLRLETELLRYVREDAEPPVHQK*
Ga0153915_122279802	3300012931	Freshwater Wetlands	MTPSLQRVSDQFPHLRERVACLFERDEIFRELCGDYEVCAEALARQESNEDLRREYSALRLRLETELLAYVNEAEQPRGRN*
Ga0153916_103061232	3300012964	Freshwater Wetlands	MTPSLQRVSEQFPHLRERVACLFERDDIFRELCDDYETCAQALSRQERNEDLRREYSALRLRLETELLAYVQEAEQPRARK*
Ga0153916_110238032	3300012964	Freshwater Wetlands	MTPCLQRVSEQFPHLRERVTCLFERDEIFRELCDDYGVCAEALARQESNEDLKREYAALRLRLETELLGYLDEAEHTHARK*
Ga0153916_116429921	3300012964	Freshwater Wetlands	MTPSLQRVSDQFPHLRQRVACLFERDEIFRELCEDYEACARALSQQERNDDLRREYSALRLRLETELLGYLQEAEHPHHPK*
Ga0075350_12140172	3300014315	Natural And Restored Wetlands	MQATMSSCLHLVSDQFPHLRDRVACLFGRDPLFRELCEDYETCAVALARQETSLGLQREYQVLRLRLETELLRFLDEDETAAGRK*
Ga0180088_10110352	3300014868	Soil	MASSLQLVCEQFPHLRERVACLFERDELFRDLCEDYEACTDALAGRPASEGLRREYSVLQLRLETELLRYVREDAEPPVHQK*
Ga0180083_10668841	3300014875	Soil	MTSSLQLVSEQFPSLRERVACLFERDEIFRELCEDYETCAEALARQPASEGLRHEYSALRLRLETELLRYLHEDAEPRLYRK*
Ga0180094_10252562	3300014881	Soil	MPTSLQLVSDQFPLVRERVACLFERNELFRELCEDYQTCAEARARQPAAEGLQRELSALQLRLETELLRYLNEDADPPVHRR*
Ga0180075_10351591	3300015252	Soil	LRERVACLFERDEIFRELCEDYETCAEALARRPASEGLRREYSALQLRLEAELLRYLREDAEPPVHQK*
Ga0180085_11824712	3300015259	Soil	PSMPTSLQLVSDQFPLVRERVACLFERNELFRELCEDYQTCAEARARQPAAEGLQRELSALQLRLETELLRYLNEDADPPVHRR*
Ga0132258_112849873	3300015371	Arabidopsis Rhizosphere	MLQATMISSLQLVREQFPLAREQFPHLRDRVVSLFDGDSVFRELCDDYEACTDALARQPASAGLRQEYAALQLRLETELLGFLNADADNPGRRK*
Ga0132256_1015454812	3300015372	Arabidopsis Rhizosphere	VAQGILHTAATMSNCLQLVREQFPHLQDRVIWLFEREPLFRELCEDYEACALALGRQKASEGLQREYQALRLRLETELLRFLHEDADK*
Ga0187776_111146252	3300017966	Tropical Peatland	MTSSLKLVTEQFPLLRDRVACLFERDPTFRELCDDYEACTVAVARQEMNEGLRREYAALRLRLETELLGYLHEVEE
Ga0187788_102278482	3300018032	Tropical Peatland	MTSSLRLVTEQFPHLRDRVACLFERDPIFRELCEDYEACTQALSRQKSSEGLQREYVALRLRLETELLRYVQDAAEAGDS
Ga0184615_100680532	3300018059	Groundwater Sediment	MASSLQVVSEQFPHLRERVACLFERDELFRELCEDYETCADALARQPASEGLRREYSALRLRLETELLRYLHEDAEPPVHPT
Ga0184615_101990611	3300018059	Groundwater Sediment	MSSCLQLVSEQFPHLRDRVACLFGRDQLFRELCEDYESCSVALERPAASEGLRREYQVLRLRLETEMLRFLNEDAEAPGGRK
Ga0187773_106071001	3300018064	Tropical Peatland	MTSSLRLVTEQFPHLRDRVACLYERDVIFRELCEDYEACTQALSRQTSSEGLQREYVALRLRLETELLRYVQDAAEAGDS
Ga0184625_100247063	3300018081	Groundwater Sediment	MSSCLRLVSEQFPHLHDRVAWLFEREPLFRELCEDYEACRLALDRQEAAEALMREYSALRLRLETELLRFLHDAAVKSGGSN
Ga0210377_101336322	3300021090	Groundwater Sediment	MSSSLQLVSEQFPHLRERVACLFERHEIFRELCEDYETCAEALARQPASEGLRREYSALQLRLETELLRYLHEDAEPPVHQK
Ga0210377_104324352	3300021090	Groundwater Sediment	MTPSLRIVFEQFPSLQERVAGLFERDELFRELCEDYGTCAEALARQPPSEDLRREYSALQLRLETELMRYLHEDADPPGRGK
Ga0209320_101944032	3300025155	Soil	MSSCLQLVTEQFPHLRDRVACLFDRDLLFRELCEDYESCSVALARQKGSEGLQREYELLRLRLETELLRFLHEDAETPSGRK
Ga0209324_101807291	3300025174	Soil	MSSCLQLVTEQFPHLRDRVACLFDRDLLFRELCEDYESCSVALARQKGSEGLQREYELLRLRLETELLRFLHEDAETP
Ga0209519_105807332	3300025318	Soil	MSSCLQLVTEQFPHLRDRVACLFDRDLLFRELCEDYESCSVALARQKDSEGLQREYELLRLRLETELLRFLHEDAETPSGRK
Ga0207675_1001208723	3300026118	Switchgrass Rhizosphere	MVSCLELVKEQFPNLKERVDSLFERDPVFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFMHDAAVKPGGSN
Ga0209077_10826323	3300027675	Freshwater Sediment	TRQASMSTCLQLVSEQFPHLRERVASLFAGDPVFRELCEDYEVCTNALARQPASHGLRQEYAALQLRLETELLGFLNEDAETSGRRK
Ga0209286_10853312	3300027713	Freshwater Sediment	MTPSLQRVSDQFPHLRERVACLFDRDEIFRELCEDYEACARALSEQERNEDLRREYAALRLRLETELLGYLHEAEEPRTRR
Ga0209703_12647272	3300027723	Freshwater Sediment	MTPSLQRVSEQFPHLRERVACLFDRDEIFRELCEDYEACARALSQQDRNEDLRREYAALRLRLETELL
Ga0209592_12153111	3300027731	Freshwater Sediment	MTPSLQRVSEQFPHLRERVACLFERDEIFRELCEDYEACARALSQQDRNEDLRREYAALRLRLETELLGYLREAEHPHTRK
Ga0209262_100598042	3300027841	Freshwater	MTPSLRLVSEQFPHLRDRVACLFERNEIFRELCEDYETCTSALARQTASGALRHEYSALQLRLETELLGYLHEDAEPAAHRK
Ga0209262_101863312	3300027841	Freshwater	MPSSLQLVSEQFPHLRERVACLFERNEIFRELCEDYETCADVLARQHASEGLRREYAALQLRLETELLKYLHEDAEPPVDSK
Ga0209397_101936062	3300027871	Wetland	MPSSLQLVSEQFPHLRERVACLFERDEIFRELCEDYETCADALARQPASEGLRREYSALRLRLETELLQYLREDAEPPPHRT
Ga0209293_101145922	3300027877	Wetland	MPTSLQLVSEQFPHLRERVACLFERELLFRELCEDYETCANALARQPASEGLRREYSALQLRLETELLRYLHEDAEPPVHRR
Ga0209293_102965832	3300027877	Wetland	MTPSLQLVSEQFPHLRERVACLFERDEIFRELCEDYETCAQALSRQESNEGLRHEYAALRLRLETELLGYLHEAEEPRVRK
Ga0208980_101797063	3300027887	Wetland	MTSSLQLVTEQFPLVRDRVASLFESDDVFRELCDDYETCSQALGRQAANEGLQRELGALRLRLETELLRYVQDVERLGIRK
Ga0208980_103819232	3300027887	Wetland	MTTSLQLVSEQFPLLRERVACLFERDETFRELCDDYETCAVALGRQTAPDGLRREYSALQLRLETELLRYLHQDAEPSVHQK
Ga0208980_104119141	3300027887	Wetland	MTPCLQLVSEQFPHLRERVACLFERDEIFRELCEDYETCAQALSQQERNEDLRREYSALRLRLETELLAYMQEAEHPHARK
Ga0209496_102477162	3300027890	Wetland	MPSSLQLVSEQFPHLRERVACLFEREEIFRELCEDYETCADALARQPANEGLCREYSALRLRLETELLRYLCEDVEPPVHRK
Ga0209253_100247485	3300027900	Freshwater Lake Sediment	MTSSLQLVSEQFPLLRERVACLFERDETFRELCEDYETCAVALARRPASDGLRREYSALQLRLETELLRYLHQDAEPSVHQKQRIKEST
Ga0209253_100539795	3300027900	Freshwater Lake Sediment	MTPSLQRVSDQFPHLRERVACLFERDDIFRELCDDYEACAEALSQQESNEDLRREYAALRLRLETE
Ga0209048_100181636	3300027902	Freshwater Lake Sediment	MTSSLRLVSEQFPDLRERVAFLFERDPIFRELCEDYEVCAQALSRQQASEALGREYAALRLRLETELLGYLHEAEAPDARK
Ga0209048_107718141	3300027902	Freshwater Lake Sediment	MTSSLQLVSEQFPLVQDRVARLFEHNLVFRELCEDYEACTLTLARQESNEGLRREYAALRLRLETELLSYVRDDAEPPVHPK
Ga0209382_108321872	3300027909	Populus Rhizosphere	MSPCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRHEAAEALMREYSALRLRLETELLRFLHDAAVKPGGSN
Ga0307281_103453181	3300028803	Soil	MASSLQFVSEQFPKLHQQVASLFDRDSIFRELCEDYEACADVLAGRPPSDDLSREYAALRLRLETELLRYLREDAEPPVHQK
Ga0315290_102516092	3300031834	Sediment	MTSSLQLVSEQFPLLRERVACVFEREEIFRELCEDYEACTLTLARQASNEGLRREYAALRLRLETELLSYVRDDAEPPVHQ
Ga0315290_107233562	3300031834	Sediment	MTSSLQLVSEQFPLLRERVACLFECEEIFRELCEDYEACTLTLARQESNEGLRGEYSALQLRLETELLRYLHEDAAPPAHT
Ga0310900_103277552	3300031908	Soil	MSSCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRQEAAEALMREYSALRLRLETELLRFLHDAAVKPGGSN
Ga0310884_108605681	3300031944	Soil	MSSCLRLVSEQFPHLHDRVAWLFDREPLFRELCEDYEACRLALDRQEAAEALMREYSALRLRLETELLRFLHDAAVKPGGNN
Ga0214473_116974542	3300031949	Soil	MTSSLQLVSEQFPLLRDRVACLFERDPIFRELCEDYEACDQALVRQRASEALQREYAALRLRLETELLGYLNETEEPRVRK
Ga0310890_112600072	3300032075	Soil	ILQSAGHMSSCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRQEAAEALMREYSALRLRLETELLRFLHDAAVKPGGNN
Ga0315292_105558092	3300032143	Sediment	MTPSLQLVREQFPQLRERVACLFERDATFRELCEDFEVCTLALAHQDSNEGLRREYAALRLRLETEMLQFLREDAEPPAHRR
Ga0310896_106098752	3300032211	Soil	MSSCLRLVSEQFPHLHDRVAWLFEHEPLFRELCEDYEACRLALDRQEAAEALMREYSALRLRLETELLRFLHDAAVKPGGRN
Ga0315270_110831781	3300032275	Sediment	MTSSLQLVSEQFPLLRERVACLFEREEIFRELCEDYEACTLTLARQESNEGLRREYSALQLRLETELLRYLHEDAAPPAHT
Ga0315286_112909092	3300032342	Sediment	MTSSLQLVREQFPQLRERVACLFERDATFRELCEDFEVCTLALAHQDSNEGLRREYAALRLRLETEMLQFLREDAEPPAHRR
Ga0315275_104769482	3300032401	Sediment	LVSEQFPLLRERVACVFEREEIFRELCEDYEACTLTLARQASNEGLRREYAALRLRLETELLSYVRDDAEPPVHQ
Ga0315275_120628892	3300032401	Sediment	MTSSLQLVSEQFPLLRERVACLFECEEIFRELCEDYEACTLTLARQESNEGLRREYSALQLRLETELLRYLHEDAAPPAHT
Ga0335085_100542005	3300032770	Soil	MSSCLELVSEQFPLLRERVASLFERDVVFRELCEDYATCALALDRQKFEEDLRKEYSALRLRLETELLGYLQETGAPSEGKPSGRRE
Ga0335080_100599493	3300032828	Soil	MNSSLELVTGQFPLLRERVTSLYETDELFRELCEDYATCALALDRQEFEASLRREYAALRLRLETELLGYLHEAEASNARKK
Ga0335076_103064713	3300032955	Soil	MTSSLKLVTEQFPAMREGFLLLFERDRIFRELCQDYEACAMALDRYASDETLHSEYGALRLRLETELLGYPHEGDERRARKE
Ga0335084_104307682	3300033004	Soil	MTSSLELVTGQFPQLRDQVRRLHEEDELFRELCEDYATCALALDRQDFEASLRREYAALRLRLETELLGYLHEAEASNARKK
Ga0335084_114189722	3300033004	Soil	MTTCLDLVSEQFPHLKERVASLFKSDAVFRELCEDYETCTLTLTRQTAQELRREYSALRLRLETELLAYLHNDCDPGGRRR
Ga0316605_113828971	3300033408	Soil	MPSSLQRISEQFPHLRERVACLYEREELFRELCEDYETCADALARQPASADLRREYAALQLRLETELLRYLHEDAEPPVHRKSESKETT
Ga0316605_118754032	3300033408	Soil	HDTPPPARQRAVPHVRQRVACLFERDEIFRELCEDYEACTQALALQESNEGLRREYAALRLRLETELLGYLREDAQPPAHGSSEAKEPT
Ga0316603_104297292	3300033413	Soil	MTPSLQRVSDQFPHLRERVACVFERDEIFRELCDDYEACAQALSRQESNEDLRREYAALRLRLETELLGYLQEAEHPHARQ
Ga0316603_111568381	3300033413	Soil	MTTALQLVTEHFPLVRDQVASLFERDQIFRELCDDYEACSQALGRQTSCEGLQREFAALRLRLETELLRYVQDVEDRGIRK
Ga0316603_112421162	3300033413	Soil	MPSSLQLVSEQFPHLRERVACLFERNELFRELCEDYEACAGALAGQPATEGLRREYGALRLRLETELLQYLREDVESPVHPK
Ga0316619_104543281	3300033414	Soil	MPTSLQLVSEQFPHLRERVACLFERELLFRELCEDYETCANALARQPASEGLRREYSALQLRLETELLRYLHEDAEPPVHRK
Ga0316619_106992882	3300033414	Soil	MTPSLQRVSDQFPHLRERVACLFESDEIFRELCDDYEACAEALVRQETNEDLKREYAALRLRLETELLGYLQEAEHPHARQ
Ga0316619_111127052	3300033414	Soil	MTPSLQLVSEQFPHLRERVACLFERDEIFRELCDDYETCAQALSRQESNEGLRHEYAALRLRLETELLGYLHEAEEPRVRK
Ga0316622_1005513112	3300033416	Soil	MTPSLQRVSDQFPHLRERVACLFESDEIFRELCDDYEACAEALVRQETNEDLKREYAALRLRLETELLGYLQEAEPPYSRK
Ga0316622_1006742862	3300033416	Soil	MTPSLQRVSDQFPHLRERVACLFERDDIFRELCDDYEVCAEALARQESNEDLKREYAALRLRLETELLGYLQEAEHPHARQ
Ga0316622_1024352582	3300033416	Soil	MTPSLQRVSDQFPHLRERVACLFERDEIFRELCEDYEACARALSQQERNDDLRREYSALRLRLETELLGYLQETEHP
Ga0316625_1006556782	3300033418	Soil	MTSSLQLVSEQFPSLRERVACLFEREEIFRELCEDYEACTLALGRQESNEGLKREYSALRLRLETELLAYLRQDAHSPVHRHQ
Ga0316625_1024622202	3300033418	Soil	MPTPLQRVSEQFPSLRERVASLFERDPIFRELCEDYQVCGEALAGRPPTDDLRREYAALQLRLETELLRYLHEDAEPPLHPKQP
Ga0316601_1014797081	3300033419	Soil	WACRPPMPSSLQLVSEQFPHLRERVACLFEREEIFRELCEDYEACTLALGRQESDEGLKREYSALRLRLETELLGYLRQDAHSPVHR
Ga0326726_108156931	3300033433	Peat Soil	EQFPHLRERVACLFERNEIFRELCEDYETCADALARQPASEGLRHEYSALRLRLETELLRYLHEDAEPPLHRKSQPRS
Ga0326726_111160191	3300033433	Peat Soil	MTPSLQRVSEQFPHLRERVACLFERDEVFRELCDDYEVCAQALAVQERSEDLRREYAALRLRLETELLGYLDEAEHPDFRK
Ga0316613_101015611	3300033434	Soil	MTASLQLVSDQFPHLRERVACLFERDVLFRELCEDYEACAQALSQQERNEDLRREYAALRLRLETELLGYLHE
Ga0316620_100280034	3300033480	Soil	MTLSLQRVSEQFPHLRERVACLFEQDEVFRELCDDYETCAQALSQHERNEDLRREYSALRLRLETELLAYLQEAEQPHARK
Ga0316620_123651572	3300033480	Soil	MTPSLQRVSEQFPHLRERVACLFEHDDIFRELCEDYEACAQALSQQERNKDLRREYTALRLRLETELLGYLEEAEHQHGRK
Ga0316627_1006918612	3300033482	Soil	MPSSLQLVTEQFPHLRERVACLFERNEIFRELCEDYGTCADALARRPASEALQHEYAALQLRLEIELLRYLREDAEPPVHRK
Ga0316627_1013835402	3300033482	Soil	MTPSLQLVSDQFPHLRERVACLFERDEIFRELCEDYETCAQALSRQESNEGLRHEYAALRLRLETELLGYLHEAEEPRVRK
Ga0316629_112778881	3300033483	Soil	MPSSLQLVSEQFPHLRERVACLFERNEIFRELCEDYETCADALARQPASDGLRREYSALRLRLETELLQYLREDAEPPPHRT
Ga0316626_115864351	3300033485	Soil	MASSLQLVSEQFPHLRERVACLFERNEIFRELCEDYETCADALARQPASDGLRREYSALRLRLETELLRYLHEDAEPPVHRK
Ga0316624_100989562	3300033486	Soil	MTLSLQRVSEQFPHLRERVACLFEHDEVFRELCDDYETCAQALSQHERNEDLRREYSALRLRLETELLAYLQEAEQPHARK
Ga0316624_121980802	3300033486	Soil	MTTSLQLVSKQFPHLQERVVCLFERDDIFRELCEDYEACTLALSRQEAKEGLRHEYAALRLRLETELLAYLQEAEEPRARK
Ga0316630_106668392	3300033487	Soil	MPTSLQLVSEQFPHLRERVACLFERDEIFRELCEDYETCADALARQPASEGLRREYSALRLRLETELLQYLREDA
Ga0316630_113164202	3300033487	Soil	MTASLQLVSDQFPHLRERVACLFERDVLFRELCEDYEACVLAHARQVSSEGLRREYSALRLRLETEMLGFL
Ga0299912_107876871	3300033489	Soil	MTPSLRLVSEQFPRLRERVACLFERDEIFRELCEDYEACAGALARQESNEDLRREYSALRLRLETELLGYLQVAEHPHARK
Ga0299912_110244102	3300033489	Soil	MTPSLERVSEQFPHLRERVACLFERDDIFRELCDDYEVCAEALARQESNEDLKREYTALRLRLETELLGYLQEAEHPHARK
Ga0316628_1010003752	3300033513	Soil	MTPSLQRVSEQFPHLRERVACLFERDEIFRELCEDYEACARALSQQERNEDLRREYSALRLRLETELLGYLDEAEHTHARK
Ga0316628_1011531021	3300033513	Soil	MTTCLQLVSKQFPHLQERVVCLFERDDIFRELCEDYEACTLALSRQEAKEGLRHEYAALRLRLETELLAYLQEAEEPHARK
Ga0316616_1027486661	3300033521	Soil	FPHLRERVACLFERDEIFRELCEDYETCADALARQPASEGLHREYSALRLRLETELLRYLHEDAEPPLHRK
Ga0316616_1044480481	3300033521	Soil	GCRPSMPTSLQLVSEQFPHLRERVACLFERELLFRELCEDYETCANALARQPASEGLRREYSALQLRLETELLRYLHEDAEPPVHRK
Ga0316617_1026999462	3300033557	Soil	MPSSLQLVSEQFPHLRERVACLFESEETFRELCEDYEACTLALGRQESDEGLKREYSALRLRLETELLGYLRQDAHSPVHR
Ga0373899_057298_236_487	3300034077	Sediment Slurry	MTSSLQLVSEQFPSLRERVACLFEREETFRELCEDYEACTLALGRQESNEGLKREYSALRLRLETELLGYLRQDAHSPVHRHQ
Ga0373911_022437_531_776	3300034081	Sediment Slurry	MTPSLQRVSEQFPHLRERVACLFERDDIFRELCDDYETCAQALSRQERNEDLRREYSALRLRLETELLAYVQEAEQPRARE
Ga0364925_0003951_1180_1428	3300034147	Sediment	MASSLQLVCEQFPHLRERVACLFERDELFRDLCEDYEACTDALAGRPASEGLRREYSVLQLRLETELLRYVREDAEPPVHQK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041285

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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