Metagenome / Metatranscriptome Family F041450

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041450
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	44 residues
Representative Sequence	ALAAGHATQAQALLRQALEIFQRIGAAEAPDLRAELDALTGPPPAR
Number of Associated Samples	127
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.89 %
% of genes near scaffold ends (potentially truncated)	94.38 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.875 % of family members)
Environment Ontology (ENVO)	Unclassified (41.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.70% β-sheet: 0.00% Coil/Unstructured: 47.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00126	HTH_1	6.25
PF02776	TPP_enzyme_N	2.50
PF02678	Pirin	2.50
PF00230	MIP	1.88
PF13560	HTH_31	1.88
PF00999	Na_H_Exchanger	1.88
PF07690	MFS_1	1.88
PF02653	BPD_transp_2	1.88
PF02635	DrsE	1.25
PF01243	Putative_PNPOx	1.25
PF00589	Phage_integrase	1.25
PF00498	FHA	1.25
PF13424	TPR_12	1.25
PF12697	Abhydrolase_6	1.25
PF03625	DUF302	1.25
PF02604	PhdYeFM_antitox	0.62
PF13561	adh_short_C2	0.62
PF00583	Acetyltransf_1	0.62
PF08281	Sigma70_r4_2	0.62
PF12695	Abhydrolase_5	0.62
PF12680	SnoaL_2	0.62
PF07859	Abhydrolase_3	0.62
PF00440	TetR_N	0.62
PF00383	dCMP_cyt_deam_1	0.62
PF13602	ADH_zinc_N_2	0.62
PF02771	Acyl-CoA_dh_N	0.62
PF07992	Pyr_redox_2	0.62
PF01494	FAD_binding_3	0.62
PF00392	GntR	0.62
PF08327	AHSA1	0.62
PF12146	Hydrolase_4	0.62
PF03069	FmdA_AmdA	0.62
PF12724	Flavodoxin_5	0.62
PF01467	CTP_transf_like	0.62
PF07286	D-Glu_cyclase	0.62
PF01695	IstB_IS21	0.62
PF01027	Bax1-I	0.62
PF02784	Orn_Arg_deC_N	0.62
PF02152	FolB	0.62
PF07702	UTRA	0.62
PF01610	DDE_Tnp_ISL3	0.62
PF13683	rve_3	0.62
PF12840	HTH_20	0.62
PF13487	HD_5	0.62
PF08241	Methyltransf_11	0.62
PF13367	PrsW-protease	0.62
PF12708	Pectate_lyase_3	0.62
PF13378	MR_MLE_C	0.62
PF03466	LysR_substrate	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	2.50
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.88
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.88
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.88
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.88
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.88
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.88
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.25
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	1.25
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.62
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.62
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.62
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.62
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.62
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.62
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.62
COG1539	Dihydroneopterin aldolase	Coenzyme transport and metabolism [H]	0.62
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.62
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.62
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.62
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.62
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.62
COG4336	Uncharacterized conserved protein YcsI, UPF0317/DUF1446 family	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.12 %
Unclassified	root	N/A	41.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.38 %
Unclassified	root	N/A	41.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.00 %
Unclassified	root	N/A	41.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.38 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.38 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.12 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.75 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.25 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.25 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.12 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.75 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.50 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.62 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.88 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.88 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.25 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.62 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.62 %
Herbidospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	0.62 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.62 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
Actinoplanes bogorensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes bogorensis	0.62 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.62 %
Herbidospora galbida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora galbida	0.62 %
Amycolatopsis camponoti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis camponoti	0.62 %
Mycobacterium bourgelatii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium bourgelatii	0.62 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.62 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.62 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	0.62 %
Amycolatopsis marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis marina	0.62 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.62 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.25 %
Streptomyces sp. NRRL S-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-4	0.62 %
Streptomyces sp. MUSC 14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MUSC 14	0.62 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.62 %
Actinoplanes bogorensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes bogorensis	0.62 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.62 %
Herbidospora galbida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora galbida	0.62 %
Amycolatopsis camponoti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis camponoti	0.62 %
Mycobacterium bourgelatii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium bourgelatii	0.62 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.62 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	0.62 %
Amycolatopsis marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis marina	0.62 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.62 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10076642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1806	Open in IMG/M
3300001356\|JGI12269J14319_10223989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300001614\|JGI20249J16330_100863	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300004082\|Ga0062384_100984920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	602	Open in IMG/M
3300004091\|Ga0062387_100445692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	887	Open in IMG/M
3300004092\|Ga0062389_103524351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	587	Open in IMG/M
3300005435\|Ga0070714_102079169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300005439\|Ga0070711_100525936	Not Available	978	Open in IMG/M
3300005439\|Ga0070711_101612244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300005537\|Ga0070730_10514925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300005712\|Ga0070764_10861369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300005764\|Ga0066903_104999740	Not Available	703	Open in IMG/M
3300005764\|Ga0066903_108076263	Not Available	539	Open in IMG/M
3300006028\|Ga0070717_10394067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1243	Open in IMG/M
3300006086\|Ga0075019_10737422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300006163\|Ga0070715_10788154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300006176\|Ga0070765_100129984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2221	Open in IMG/M
3300006881\|Ga0068865_102193720	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009520\|Ga0116214_1233082	Not Available	697	Open in IMG/M
3300010048\|Ga0126373_10063597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3313	Open in IMG/M
3300010048\|Ga0126373_10464095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1303	Open in IMG/M
3300010048\|Ga0126373_12142093	Not Available	621	Open in IMG/M
3300010048\|Ga0126373_12543649	Not Available	571	Open in IMG/M
3300010361\|Ga0126378_13345742	Not Available	509	Open in IMG/M
3300010366\|Ga0126379_13558641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300010371\|Ga0134125_12174928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300010376\|Ga0126381_104997552	Not Available	509	Open in IMG/M
3300010379\|Ga0136449_104406182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300010398\|Ga0126383_12988676	Not Available	552	Open in IMG/M
3300010403\|Ga0134123_12576683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	575	Open in IMG/M
3300011120\|Ga0150983_10278006	Not Available	612	Open in IMG/M
3300012961\|Ga0164302_10354696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	982	Open in IMG/M
3300012985\|Ga0164308_10201120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1518	Open in IMG/M
3300013308\|Ga0157375_12522149	Not Available	614	Open in IMG/M
3300014657\|Ga0181522_10365003	All Organisms → cellular organisms → Bacteria → Terrabacteria group	861	Open in IMG/M
3300015372\|Ga0132256_102540052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300015374\|Ga0132255_103362874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-4	681	Open in IMG/M
3300016294\|Ga0182041_10841898	Not Available	822	Open in IMG/M
3300016294\|Ga0182041_10916619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300016294\|Ga0182041_11970936	Not Available	543	Open in IMG/M
3300016357\|Ga0182032_10674874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300016404\|Ga0182037_10394110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300016422\|Ga0182039_11559574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	602	Open in IMG/M
3300016445\|Ga0182038_11521021	Not Available	601	Open in IMG/M
3300017955\|Ga0187817_11141879	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300017970\|Ga0187783_10162686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1644	Open in IMG/M
3300017970\|Ga0187783_10574206	Not Available	816	Open in IMG/M
3300017972\|Ga0187781_10780535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	693	Open in IMG/M
3300018006\|Ga0187804_10578075	Not Available	509	Open in IMG/M
3300018007\|Ga0187805_10564746	Not Available	536	Open in IMG/M
3300018085\|Ga0187772_11092176	Not Available	585	Open in IMG/M
3300018085\|Ga0187772_11309605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300019260\|Ga0181506_1155357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300020581\|Ga0210399_11486115	Not Available	526	Open in IMG/M
3300021181\|Ga0210388_11733580	Not Available	516	Open in IMG/M
3300021401\|Ga0210393_10593500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	905	Open in IMG/M
3300021401\|Ga0210393_11120134	Not Available	635	Open in IMG/M
3300021401\|Ga0210393_11607414	Not Available	515	Open in IMG/M
3300021560\|Ga0126371_10002244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16598	Open in IMG/M
3300021560\|Ga0126371_11343380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300021560\|Ga0126371_12478714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300025412\|Ga0208194_1058928	Not Available	589	Open in IMG/M
3300025929\|Ga0207664_10796696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300026023\|Ga0207677_11123189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300026551\|Ga0209648_10040232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4045	Open in IMG/M
3300027090\|Ga0208604_1026543	Not Available	546	Open in IMG/M
3300027110\|Ga0208488_1000545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6380	Open in IMG/M
3300027604\|Ga0208324_1203673	Not Available	524	Open in IMG/M
3300027824\|Ga0209040_10022086	All Organisms → cellular organisms → Bacteria	4142	Open in IMG/M
3300027825\|Ga0209039_10098680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1255	Open in IMG/M
3300027829\|Ga0209773_10071519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1417	Open in IMG/M
3300027879\|Ga0209169_10535156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300027905\|Ga0209415_10547952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis camponoti	874	Open in IMG/M
3300027908\|Ga0209006_10962930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300028742\|Ga0302220_10065447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1486	Open in IMG/M
3300028789\|Ga0302232_10095180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MUSC 14	1529	Open in IMG/M
3300028801\|Ga0302226_10196133	Not Available	866	Open in IMG/M
3300028807\|Ga0307305_10523843	Not Available	530	Open in IMG/M
3300029882\|Ga0311368_10255513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1352	Open in IMG/M
3300029999\|Ga0311339_10361883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1529	Open in IMG/M
3300030056\|Ga0302181_10027260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3192	Open in IMG/M
3300030503\|Ga0311370_10512604	Not Available	1466	Open in IMG/M
3300030520\|Ga0311372_11044114	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300030524\|Ga0311357_11075093	All Organisms → cellular organisms → Bacteria → Terrabacteria group	703	Open in IMG/M
3300030580\|Ga0311355_10983086	All Organisms → cellular organisms → Bacteria → Terrabacteria group	760	Open in IMG/M
3300030617\|Ga0311356_10057106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4153	Open in IMG/M
3300030617\|Ga0311356_10356088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes bogorensis	1454	Open in IMG/M
3300030618\|Ga0311354_10066093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4139	Open in IMG/M
3300030730\|Ga0307482_1145296	Not Available	688	Open in IMG/M
3300031233\|Ga0302307_10171178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300031545\|Ga0318541_10163492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300031545\|Ga0318541_10598377	Not Available	617	Open in IMG/M
3300031640\|Ga0318555_10500925	Not Available	658	Open in IMG/M
3300031668\|Ga0318542_10031341	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300031679\|Ga0318561_10173224	Not Available	1165	Open in IMG/M
3300031681\|Ga0318572_10689544	Not Available	608	Open in IMG/M
3300031708\|Ga0310686_106950636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	538	Open in IMG/M
3300031708\|Ga0310686_115142926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3051	Open in IMG/M
3300031713\|Ga0318496_10162422	Not Available	1222	Open in IMG/M
3300031724\|Ga0318500_10306485	Not Available	779	Open in IMG/M
3300031736\|Ga0318501_10311514	Not Available	842	Open in IMG/M
3300031751\|Ga0318494_10679959	Not Available	602	Open in IMG/M
3300031753\|Ga0307477_10607751	Not Available	737	Open in IMG/M
3300031764\|Ga0318535_10115810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300031764\|Ga0318535_10415346	Not Available	600	Open in IMG/M
3300031768\|Ga0318509_10646630	Not Available	588	Open in IMG/M
3300031769\|Ga0318526_10457621	Not Available	521	Open in IMG/M
3300031770\|Ga0318521_10067717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1893	Open in IMG/M
3300031777\|Ga0318543_10130273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1097	Open in IMG/M
3300031779\|Ga0318566_10399594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300031793\|Ga0318548_10251767	Not Available	868	Open in IMG/M
3300031795\|Ga0318557_10067491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1538	Open in IMG/M
3300031797\|Ga0318550_10403945	Not Available	661	Open in IMG/M
3300031798\|Ga0318523_10430242	Not Available	655	Open in IMG/M
3300031799\|Ga0318565_10111772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora galbida	1314	Open in IMG/M
3300031799\|Ga0318565_10300521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium bourgelatii	779	Open in IMG/M
3300031799\|Ga0318565_10310316	Not Available	766	Open in IMG/M
3300031805\|Ga0318497_10833164	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031831\|Ga0318564_10119751	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1172	Open in IMG/M
3300031831\|Ga0318564_10368557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300031835\|Ga0318517_10043914	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1851	Open in IMG/M
3300031893\|Ga0318536_10492185	Not Available	617	Open in IMG/M
3300031894\|Ga0318522_10287370	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031896\|Ga0318551_10275208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	944	Open in IMG/M
3300031896\|Ga0318551_10463011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	725	Open in IMG/M
3300031897\|Ga0318520_10029626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2720	Open in IMG/M
3300031897\|Ga0318520_10618627	Not Available	674	Open in IMG/M
3300031941\|Ga0310912_11085544	Not Available	612	Open in IMG/M
3300031947\|Ga0310909_11038325	Not Available	668	Open in IMG/M
3300031954\|Ga0306926_11809356	Not Available	693	Open in IMG/M
3300032001\|Ga0306922_10433837	Not Available	1405	Open in IMG/M
3300032001\|Ga0306922_10621550	Not Available	1143	Open in IMG/M
3300032008\|Ga0318562_10053611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2217	Open in IMG/M
3300032008\|Ga0318562_10296554	Not Available	939	Open in IMG/M
3300032008\|Ga0318562_10526065	Not Available	685	Open in IMG/M
3300032010\|Ga0318569_10049970	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1805	Open in IMG/M
3300032010\|Ga0318569_10189175	Not Available	953	Open in IMG/M
3300032010\|Ga0318569_10427864	Not Available	617	Open in IMG/M
3300032039\|Ga0318559_10095574	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300032041\|Ga0318549_10164277	Not Available	991	Open in IMG/M
3300032044\|Ga0318558_10717138	Not Available	500	Open in IMG/M
3300032052\|Ga0318506_10307027	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300032052\|Ga0318506_10495266	Not Available	542	Open in IMG/M
3300032055\|Ga0318575_10357419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300032059\|Ga0318533_10261934	Not Available	1250	Open in IMG/M
3300032060\|Ga0318505_10276442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300032063\|Ga0318504_10492656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	587	Open in IMG/M
3300032066\|Ga0318514_10634159	Not Available	569	Open in IMG/M
3300032067\|Ga0318524_10792904	Not Available	501	Open in IMG/M
3300032126\|Ga0307415_101197168	Not Available	716	Open in IMG/M
3300032261\|Ga0306920_102115199	All Organisms → cellular organisms → Bacteria → Terrabacteria group	785	Open in IMG/M
3300032261\|Ga0306920_102138216	Not Available	780	Open in IMG/M
3300032895\|Ga0335074_10140614	All Organisms → cellular organisms → Bacteria	3079	Open in IMG/M
3300032895\|Ga0335074_11470000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	545	Open in IMG/M
3300033134\|Ga0335073_10080430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4258	Open in IMG/M
3300033134\|Ga0335073_10981767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300033290\|Ga0318519_10898550	Not Available	547	Open in IMG/M
3300033475\|Ga0310811_11279963	Not Available	588	Open in IMG/M
3300033803\|Ga0314862_0067568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis marina	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.25%
Host-Associated	Host-Associated	3.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.12%
Aquatic	Environmental → Aquatic	8.12%
Plants	Host-Associated → Plants	3.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.38%
Peat	Environmental → Terrestrial → Peat	8.75%
Freshwater	Environmental → Aquatic → Freshwater	7.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.88%
Sediment	Environmental → Aquatic → Sediment	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.12%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001614	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF015	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100766421	3300001356	Peatlands Soil	EAGVLLRQALEIFQRIGAAEADDVARELTALTEAGPPA*
JGI12269J14319_102239892	3300001356	Peatlands Soil	AGLGRCALAAGRATQAEAFLRQALEIFQRIGVPDADDVSRELTALTEVSRQPQRPA*
JGI20249J16330_1008632	3300001614	Forest Soil	LLRQALETFQRIGAAEAPDLLAELDTLTGPPPAR*
Ga0062384_1009849202	3300004082	Bog Forest Soil	GRCALAAGSATDAEAWLQQALETFQRIGAAEAADVSAELDALRAAG*
Ga0062387_1004456921	3300004091	Bog Forest Soil	ALAVGHAVQAEGLLRQALEIFQRIGAAEAPDLLTELDALTAQPPAP*
Ga0062389_1035243511	3300004092	Bog Forest Soil	GHATQAAALLRQALEIFQRTGAADAGNVARELAALTEAGPPA*
Ga0070714_1020791691	3300005435	Agricultural Soil	GHATQAEILLRQALEIFQRTGAAEADGVARELAAFTEAGPPA*
Ga0070711_1005259363	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GRTAQAEALLRHALEIFQRTGAAETPALLAELDALTGPPPANDAT*
Ga0070711_1016122442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LGRCALAAGHATQAEILLRQALEIFQRIGAAEADGVARELAALAGPGPPA*
Ga0070730_105149252	3300005537	Surface Soil	LAGLGRCALAGGRAAQAEDLLRQALEIFQRIGAAETPDMSAELEALTSARPSAQSS*
Ga0070764_108613692	3300005712	Soil	GLGRCALAASHATQAAALLHQALEIFTRIGAAEAPDLRAELDALTGPPPAQ*
Ga0066903_1049997401	3300005764	Tropical Forest Soil	AAGHTTQAQAHLRQALEIFQRTGAAEAGEVSRELTALTEAGPPA*
Ga0066903_1080762631	3300005764	Tropical Forest Soil	AAGHTTQAQAHLRQALEIFQRTGAAEAGEVSRELTALTEARPPA*
Ga0070717_103940673	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ALAAGHATQAETLLRQALEIFQRIGAAEAVGVSAELDAATQPQSAERPAVRRTDL*
Ga0075019_107374222	3300006086	Watersheds	RPLYPRDAQARVLLRQALKILQRIGAAEAYDVVRELTTLTEAGPPA*
Ga0070715_107881541	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LAGLGRCALAAGHATQAEILLRQALEIFQRTGAAEADGVARDLTALTEAGPPA*
Ga0070765_1001299844	3300006176	Soil	RCALAAGHATQAEILLRQALEIFHRIGAAEAPDLVAELDALTGPPPAP*
Ga0068865_1021937202	3300006881	Miscanthus Rhizosphere	TQAGILLRQALEIFQRIGAAEADGVARELAAVAEAGPPA*
Ga0116214_12330821	3300009520	Peatlands Soil	TLAAGHATQAEALLRQALEILQRIGAAEADDVSRELTAITEAGPPA*
Ga0126373_100635974	3300010048	Tropical Forest Soil	LRIALGHATEAEILLRQALEIFRDTGAAEARELHAELDALRAIG*
Ga0126373_104640952	3300010048	Tropical Forest Soil	LLRQALEIFQRIGAVEAGDISRELTALAEAGPPA*
Ga0126373_121420931	3300010048	Tropical Forest Soil	AALLRQALGIFQRIGAAEAPDLRAELDALTGPPPAQ*
Ga0126373_125436491	3300010048	Tropical Forest Soil	LGRCALAARHATRAAELLHQAAEIFQRTGAAEAGDVSRELTALTEAGPPP*
Ga0126378_133457421	3300010361	Tropical Forest Soil	AGRTVQDGGLLRQALEIFQRIGAAEVPGLTAELGALASPPSAR*
Ga0126379_135586411	3300010366	Tropical Forest Soil	RCALAADHATQALAFLRQALEIFQRIGTAEANDVSRELTALTEAGPPA*
Ga0134125_121749281	3300010371	Terrestrial Soil	ALAGLGRCALASDRATKAEALLRQALEIFQRIGAAEAAYVSVELDALTEAEPAAPGS*
Ga0126381_1048552132	3300010376	Tropical Forest Soil	EALAGLGRCDWAAGRASDARARLGQALEIFQRVGVAEASEVAVELDALTTVPERTSSSH*
Ga0126381_1049975521	3300010376	Tropical Forest Soil	AQALLQQAHEIFQRIGAAETLSVLAELSALTTPEPPGKR*
Ga0136449_1044061823	3300010379	Peatlands Soil	AAGHARHAGVLLRQALEIFQRIGAAEAPDLRTELDTLTGPPPAH*
Ga0126383_129886762	3300010398	Tropical Forest Soil	QALLRQALEIFQRTGAAEAGEVSRELTALTEARPPA*
Ga0134123_125766832	3300010403	Terrestrial Soil	GHATQAEILLRQALEIFQRIGAAEADGVARELAALAEAGPPA*
Ga0150983_102780062	3300011120	Forest Soil	GLGRCALAAGRATQAEALLRQALHIFQRIGAGEAPDLLAELDALNGAPPP*
Ga0164302_103546962	3300012961	Soil	AGHATQAGILLRQALEVFQRIGAAEADGVTRELAALAEAGPPA*
Ga0164308_102011201	3300012985	Soil	RRRRRAAAGHATQAGILLRQALEIFQRIGAAEADGVTRELAALAEAGPPA*
Ga0157375_125221491	3300013308	Miscanthus Rhizosphere	HAAQASGLLRQSLAIFQQIGGAEAPDLLAELDALTGLPPPPFN*
Ga0181522_103650031	3300014657	Bog	QAADQGTQAEVLLRQALEIFQRIGAAEAPDLLAELDARTEHSGLQA*
Ga0132256_1025400521	3300015372	Arabidopsis Rhizosphere	LGRCVLAVGHATQAAALLQQALEIFQRIGAAEAGDISRELTALTAAGPPA*
Ga0132255_1033628741	3300015374	Arabidopsis Rhizosphere	GHATQAGVLLRQAVQIFQRIGAAEAPDLLAELDTLTGPQPAQ*
Ga0182041_108418982	3300016294	Soil	AAALLQQALEIFQRIGTAEAGDVSRELTALTEAGPPT
Ga0182041_109166192	3300016294	Soil	GRCALAAGNATRAGILLRQALDIFQRIGAAEAQDLRAELDALTGPRRGE
Ga0182041_119709361	3300016294	Soil	QARALLRQALEIFQRIGAAETPDVTAELETLTSPKPAQ
Ga0182032_106748742	3300016357	Soil	AAGHAAQARALLCQALQIFQRIGAAETPDLLAELDTLTSPKPAR
Ga0182037_103941104	3300016404	Soil	AAQARVLLRQALEIFQRIGAAEAAEVSGELGALTQAQPAAPGS
Ga0182039_115595742	3300016422	Soil	GHATQAQALLRQALEIFQRTGAAEASDVSRELAALTEAGPPA
Ga0182038_115210211	3300016445	Soil	ILLRQALEIFQRIGAAEVPELRAELDALTGPPPAH
Ga0187817_111418791	3300017955	Freshwater Sediment	ALEIFQRIGAAEADDLASELTTLTETRPSAYPGADQS
Ga0187783_101626862	3300017970	Tropical Peatland	VAAGHATQAAALLRQALEIFQRIGAVEVGDVSRELAALTKAGPPS
Ga0187783_105742061	3300017970	Tropical Peatland	HPTQAEVLLREALEIFQRIGAAEAPDVLAELGPLSVPPPAR
Ga0187781_107805351	3300017972	Tropical Peatland	AQAAGHAGQAADMLRQALEIFRRGGMAEAAEVSAELQALTDSRPSTHGT
Ga0187804_105780751	3300018006	Freshwater Sediment	ALAADHASQAGVLLRQALEIFQRIGAAAAAGVSAELEALTGARPSAQGL
Ga0187805_105647461	3300018007	Freshwater Sediment	GRCALAAGHATQAGVLLRQALEIFQRIGAAEAAGVSAELEALTGARPSAQGL
Ga0187772_110921763	3300018085	Tropical Peatland	GRCALAADCAAEAAAGLRQALEIFQRIGAAETAYVSAELETLERS
Ga0187772_113096052	3300018085	Tropical Peatland	AEVLLRQALEIFRRIGAAEVPDLLAELDALAGPPAAQ
Ga0181506_11553571	3300019260	Peatland	LGRCALAAGHAAQAEILLRQALEIFQRIGAAEAPDLLAELDES
Ga0210399_114861151	3300020581	Soil	RWSGLGRCALAADRAAQAAALLRRALEIFQRIGAAEVGHVSRELTALTQAGPPA
Ga0210388_117335801	3300021181	Soil	RCALAADRAAQAEVLLGRALEIFQRIGTAEAPDLLAELAALTGPPPAQ
Ga0210393_105935002	3300021401	Soil	GRCALAGGHAAQAEILLRQALEIFQRIGAAEADGVARELAALAEAGPPA
Ga0210393_111201341	3300021401	Soil	ALACLGRCALAAGHATRAEDMLLQALEIFERIGAAEGAAVSTELQALIGARPTAQGH
Ga0210393_116074141	3300021401	Soil	QAAAFLRQALEIFQRIGAAEAADVSRELAALTGAGPLA
Ga0126371_100022443	3300021560	Tropical Forest Soil	LRIALGHATEAEILLRQALEIFRDTGAAEARELHAELDALRAIG
Ga0126371_113433801	3300021560	Tropical Forest Soil	AEDMLRQALEIFQRIGAPEAPDLLTELDALTGPPPAHTQ
Ga0126371_124787142	3300021560	Tropical Forest Soil	ALAAGHATQAQALLRQALEIFQRIGAAEAPDLRAELDALTGPPPAR
Ga0208194_10589281	3300025412	Peatland	IQAEVLLRQALEIFQRIGAAEAPDLLAELDASPGPPLAR
Ga0207664_107966962	3300025929	Agricultural Soil	VGHATQAEILLRQALEIFQRTGAAEADGVARELAAFTEAGPPA
Ga0207677_111231891	3300026023	Miscanthus Rhizosphere	TQAGILLRQALEIFQRIGAAEADGVARELAAVAEAGPPA
Ga0209648_100402322	3300026551	Grasslands Soil	MAVGHGKQAEVLLRQALEIFQRIGAGEAADVSAELEAVTGAPPSAPGL
Ga0208604_10265432	3300027090	Forest Soil	TQAEALLRQALHIFQRIGAGEAPDLLAELDALNGAPPP
Ga0208488_10005456	3300027110	Forest Soil	AEGAAGLRQALEIFQRLGAAEVPGLIAEIASLPGQPPAR
Ga0208324_12036732	3300027604	Peatlands Soil	TLAAGHATQAEALLRQALEILQRIGAAEADDVSRELTAITEAGPPA
Ga0209040_100220863	3300027824	Bog Forest Soil	EALLRQALEIFQRIGAAEADDVARELTTFTEAGPPA
Ga0209039_100986801	3300027825	Bog Forest Soil	RSRPLYPRDGQAAQARVLLRQALKILQRIGAAEADDVVRELTTLTEAGPPA
Ga0209773_100715192	3300027829	Bog Forest Soil	AGLGRCATAAGHATQAEVLLRRALEIFQRIGAAEAPDVLAELHALTGPPPAQ
Ga0209169_105351562	3300027879	Soil	ASHATQAAALLHQALEIFTRIGAAEAPDLRAELDALTGPPPAQ
Ga0209415_105479522	3300027905	Peatlands Soil	MAAGHAAQAEVLLRQALEIFQSLGAAEAADLLAELDARSGPTPQD
Ga0209006_109629301	3300027908	Forest Soil	ATQAEILLRQALEIFQRIGAAEADGVARELAALAEAGPPA
Ga0302220_100654472	3300028742	Palsa	GRCAMAAGHAAQAEALLRQALEIFQRIGAAEVADLLAELDVFAGRPTAQ
Ga0302232_100951801	3300028789	Palsa	VGRATQAKVLLRQALEIFQRIGAAEAPDLLAELAALTGPPPAQ
Ga0302226_101961332	3300028801	Palsa	AVGHTTQAEVLLRQALEIFQRIGAAEARGLIAELDALASPSPS
Ga0307305_105238431	3300028807	Soil	LAAGHATQAGVLLRQALEIFQRIGAAEAADLLGELDALAGPPPVQ
Ga0311368_102555131	3300029882	Palsa	DHLRRALEIFRRIDAADAGDVSRELAALTEAGPPA
Ga0311339_103618833	3300029999	Palsa	MADGHATQAEVLLRQALEIFQRIGAAEVPDLVAELDALTGSRSVQW
Ga0302181_100272603	3300030056	Palsa	VQAEGLLRQALEIFQRIGAAEAPDLLTELDALTALPPAP
Ga0311370_105126041	3300030503	Palsa	CAIAVGRATQAEVLLRQARETFQRIGAAEASDLLAELDALTGPPPAQ
Ga0311372_110441143	3300030520	Palsa	CALASGHAAEAEANLRQALEIFQRIGAAEAAELAAEFDAIRAAG
Ga0311357_110750931	3300030524	Palsa	HATQAAALLRQALEIFNRIGAAEAPDLRAELDALTGPPPAP
Ga0311355_109830861	3300030580	Palsa	VASHATQAAALLRQALEIFNRIGAAEAPDLRAELDALTGPPPAP
Ga0311356_100571061	3300030617	Palsa	AVQAEGLLRQALEIFQRIGAAEAPDLLTELDALTALPPAP
Ga0311356_103560881	3300030617	Palsa	PATPAQAEALLRQALEIFQRIGAAEAPDLLAGLDALTGPPPAQ
Ga0311354_100660934	3300030618	Palsa	GLLRQALEIFQRIGAAEAPDLLTELDALTALPPAP
Ga0307482_11452962	3300030730	Hardwood Forest Soil	AQAIALLQQAHQITQLIGSAEASGLLAELDALAGTRP
Ga0302307_101711782	3300031233	Palsa	MAAGHAAQAEALLRQALEIFQRIGAAEVADLLAELDVFAGRPTAQ
Ga0318541_101634921	3300031545	Soil	ALAFLRQALEIFQRIGTAEANDVSRELAALTEAGPA
Ga0318541_105983771	3300031545	Soil	HAAQARALLCQALQIFQRIGAAETPDLLAELDTLTSPKPAR
Ga0318555_105009251	3300031640	Soil	ALAAGHAAQARVLLRQALEIFQRIGAAEAAEVSGELGALTQAQPAAPGS
Ga0318542_100313414	3300031668	Soil	LAGLGRCALAAGDATRAGILLRQALEIFQRTGAAEAQDLRAEVDALTGPRRGE
Ga0318561_101732243	3300031679	Soil	TQAEALLRQALEIFQRIGSAEAPDLLAELDALAGPPPAH
Ga0318572_106895441	3300031681	Soil	TQAKALLRQALEIFQRIGAAETPDLLAELDTFTSPPPAQ
Ga0310686_1069506361	3300031708	Soil	LAAGDAGQAGALLRQALEIFQRTGAVEAAGTAAELDALGQG
Ga0310686_1151429262	3300031708	Soil	MADYRATQAEALLRQALEIFQRIGAAEATDVSGELQALTDARPAAQGS
Ga0318496_101624221	3300031713	Soil	HATEAQALLRQALEIFQRIAAAEASDVASELTALTEAGPPA
Ga0318500_103064853	3300031724	Soil	LGRCALAAGDATRAGILLRQALEIFQRTGAAETADLRAELDALTGPRRGE
Ga0318501_103115142	3300031736	Soil	ILLRQALEIFQRTGAAETADLRAELDVLTGPPRGE
Ga0318494_106799591	3300031751	Soil	CKRAAGHATQAAALLQQALEIFQRIGAAEATDLLAELDALTGPPPAQ
Ga0307477_106077513	3300031753	Hardwood Forest Soil	AGHVTQAEALLRRALEIFQRTGAAEAADVSAELKDLTDARPAAQGS
Ga0318535_101158101	3300031764	Soil	LGRCALAAGHATQAGVLLRQALEIFQRTEAAEAPDLLAELDALTVVRPEYVRNGP
Ga0318535_104153461	3300031764	Soil	VADGHATQAEVLLRQALEIFQRIGAAEAPDLLAELDTLTGPRTTG
Ga0318509_106466301	3300031768	Soil	SSACCKRAAGHATQAAALLQQALEIFQRIGAAEATDLLAELDALTGPPPAQ
Ga0318526_104576211	3300031769	Soil	ATQARALLRHALEIFQRIGAAETPDLLTELDALTSPPPAQ
Ga0318521_100677171	3300031770	Soil	PGAADHATQALAFLRQALEIFQRIGTAEANDVSRELAALTEAGPA
Ga0318543_101302733	3300031777	Soil	GHAARAAVLLRQALEIFQGIGAAEAPELHAELEALTGPPLA
Ga0318566_103995941	3300031779	Soil	HTTQARALLRQALEIFQRIGAAETPDLLAELDALTSPPPAQ
Ga0318548_102517673	3300031793	Soil	GLGHCALASGHATRAEALLRQALEIFQRIGAAEAPGLRAELDALTSPPHGR
Ga0318557_100674913	3300031795	Soil	AGLGRWGLAAGHATQAEALLRQALEIYQQLGAAEAGEVSRELAALTEAGPPA
Ga0318550_104039451	3300031797	Soil	RALLRQALEIFQRIGAAEAPDLRAELDTLTSSPAQ
Ga0318523_104302421	3300031798	Soil	AQARALLRQALQIFQRIGAAETPDLLAELDTLTSPKPAR
Ga0318565_101117721	3300031799	Soil	DATRAGILLRQALEIFQRTGAAETADLRAELDALTGPRRGE
Ga0318565_103005212	3300031799	Soil	TQAQALLRQALEIFQRIEAAEASDVSRELTALTEAGPPA
Ga0318565_103103161	3300031799	Soil	VGHATQGEAFLRQALEIFQRIGAAEAGDVSRELTALTEAGPPT
Ga0318497_108331642	3300031805	Soil	ATQAQALLRQALEIFQRIEAAEASDVSRELTALTEAGPPA
Ga0318564_101197513	3300031831	Soil	ALAGLGRCALAAGDATRAGILLRQALEIFQRTGAAETADLRAELDVLTGPPRGE
Ga0318564_103685571	3300031831	Soil	CALAAGHATQAGVLLRQALEIFQRIGAAEAAELSAELQALTGARPSAAGP
Ga0318517_100439144	3300031835	Soil	RAGILLRQALEIFQRTGAAEAQDLRAEVDALTGPRRGE
Ga0318536_104921852	3300031893	Soil	AAALLRQALEIFQRIGAAEAPDLRAELDALTGPPPAR
Ga0318522_102873701	3300031894	Soil	ALAAGDATRAGILLRQALEIFQRTGAAEAQDLRAEVDALTGPRRGE
Ga0318551_102752081	3300031896	Soil	RCALAAGHATQAQALLRQALEIFQRTGAAEAGDVSRELAALSEAGPPA
Ga0318551_104630111	3300031896	Soil	GRCALAAGHVAQAEILLRQALEIFQRIGAAGEAPELRAELDALTGPPPAQ
Ga0318520_100296266	3300031897	Soil	LEQALAFLRQALEIFQRIGTAEANDVSRELAALTEAGPA
Ga0318520_106186271	3300031897	Soil	TQAEALLRQALEIFQRIGAAEAPGLRAELDALTSPPHGR
Ga0310912_110855441	3300031941	Soil	AALLRQALEIFQRIGAAEAPDLRAELDALTGPPPAR
Ga0310909_110383253	3300031947	Soil	ALAAGHITQARALLRQALEIFQRIGAAEAPDLIAELDTLTSPPPAQ
Ga0306926_118093561	3300031954	Soil	GHATEAQALLRQALEIFQRIGAAEASDVASELAALAGAGPPA
Ga0306922_104338372	3300032001	Soil	AGDHATQAQALLRQALEIFQRTGAAEASDVASELTALTEAGPPA
Ga0306922_106215503	3300032001	Soil	AAGHATQAAALLQQALEIFQRIGTAEAGDVSRELTALTEAGPPT
Ga0318562_100536111	3300032008	Soil	VGGLGRCALAADHATQALAFLRQALEIFQRIGTAEANDVSRELAALTEAGPA
Ga0318562_102965542	3300032008	Soil	HSTGHATQAAALLRQALEIFQRIGAAEAPDLRAELDALTGPPPAR
Ga0318562_105260651	3300032008	Soil	TQAQALLRQALEIFQRTGAAEAGDVSRELAALSEAGPPA
Ga0318569_100499703	3300032010	Soil	EAHALAGLGRCALAAGDATRAGILLRQALEIFQRTGAAETADLRAELDVLTGPPRGE
Ga0318569_101891751	3300032010	Soil	TQAAALLRQALEIFQRIDAAGATRAARELAALTEPGLPA
Ga0318569_104278641	3300032010	Soil	GHATQARALLRQALEIFQRIGAAEAPDLRAELDTLTSSPAQ
Ga0318559_100955741	3300032039	Soil	PRAGILLRQALEIFQRTGAAEAQDLRAEVDALTGPRRGE
Ga0318549_101642772	3300032041	Soil	ALAVGHATQAEALLRQALEIFQRIGSAEAPDLLAELDALAGPPPAH
Ga0318558_107171381	3300032044	Soil	AAGHATQAQALLRQALEIFQRTGAAEAGDVSRELAALSEAGPPA
Ga0318506_103070271	3300032052	Soil	AAGDATRAGILLRQALEIFQRTGAAEAQDLRAEVDALTGPRRGE
Ga0318506_104952662	3300032052	Soil	RCALAADHATQALAFLRQALEIFQRIGTAEANDVSRELAALTEAGPA
Ga0318575_103574192	3300032055	Soil	GRCALAAGHATQAGALLCQALEIFQRIGAAETPGLLAELDTLTSPPPAQ
Ga0318533_102619343	3300032059	Soil	GHATQAEALLRQALEIFQRIGAAEAPGLRAELDALTSPPHGR
Ga0318505_102764421	3300032060	Soil	AGLGRWGLAAGHATQAEALLRQALEIYQQLGAAEAGEVSRELAALTEAGPPG
Ga0318504_104926561	3300032063	Soil	CALAADHATQAGVLLRQALEIFQRIGAAEAADLSAELQALTGARPSAAGP
Ga0318514_106341591	3300032066	Soil	TQAKALLHQALEIFQRIGAAEAPDLRAELDTLTSPPAQ
Ga0318524_107929042	3300032067	Soil	EDPGLAAGHAAQARVLLRQALEIFQRIGAAEAAEVSGELGALTQAQPAAPGS
Ga0307415_1011971681	3300032126	Rhizosphere	LGRCDLAAGDIPAAVTQLSTALEIFQRIGAAEAADVAAELDAVRAGHPPDG
Ga0306920_1021151991	3300032261	Soil	AAGDATRAGVLLRQALEIFQRIGAAETPDLLAELDALTGSPPAP
Ga0306920_1021382162	3300032261	Soil	AVALLRQALEIFQRIGAAEAGDVSRELTALTGPPT
Ga0335074_101406145	3300032895	Soil	ALAAGRATQAAVLLRQALEIFHRIGAAETPDLRTELDALTGTPPVR
Ga0335074_114700002	3300032895	Soil	GDTAQAGVLLRQALEIFQRIGAAEAPDVAAELAAVSQSVPRST
Ga0335073_100804306	3300033134	Soil	AGDATQAKALLRQALEIFQRIGAAEAPNLLAELDALTSPPPAP
Ga0335073_109817671	3300033134	Soil	MAVGDAGNIQAGQAEALLRQALEIFRRIGTAEAQDLHAELDTHAGPRP
Ga0318519_108985502	3300033290	Soil	RCAMADGHATQAGVLLRQGLEIFQRIGAAEAPDLLAELDALTVPPLAQ
Ga0310811_112799631	3300033475	Soil	RCALAAADAVQAGILLRLALEIFQRIGAAETPELLAEVAALSGNRS
Ga0314862_0067568_648_794	3300033803	Peatland	RCALAAGHATQAQALLRKALGIFQRIGTTEAGDVSRELTALTEAGPPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041450

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences