Metagenome / Metatranscriptome Family F050234

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050234
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	80 residues
Representative Sequence	VIPPWPLLVLMLEFPVLMALLDCWQRPPDHFAEGADDRRAWLRWLVVAVVTVPVLLGYGIVLGYYYAVVRRSSPSSPR
Number of Associated Samples	98
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.74 %
% of genes near scaffold ends (potentially truncated)	29.66 %
% of genes from short scaffolds (< 2000 bps)	84.14 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.172 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.345 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.49% β-sheet: 0.00% Coil/Unstructured: 41.51%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF10604	Polyketide_cyc2	31.03
PF02374	ArsA_ATPase	9.66
PF03364	Polyketide_cyc	8.97
PF00534	Glycos_transf_1	6.90
PF00480	ROK	1.38
PF10724	DUF2516	0.69
PF02668	TauD	0.69
PF13484	Fer4_16	0.69
PF07589	PEP-CTERM	0.69
PF02518	HATPase_c	0.69
PF08241	Methyltransf_11	0.69
PF00361	Proton_antipo_M	0.69
PF06161	DUF975	0.69
PF02467	Whib	0.69
PF02653	BPD_transp_2	0.69
PF12847	Methyltransf_18	0.69
PF02602	HEM4	0.69
PF13646	HEAT_2	0.69
PF01636	APH	0.69
PF12794	MscS_TM	0.69
PF02885	Glycos_trans_3N	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	2.76
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	0.69
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG5523	Uncharacterized membrane protein	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.17 %
Unclassified	root	N/A	4.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.17 %
Unclassified	root	N/A	4.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.17 %
Unclassified	root	N/A	4.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.34 %
Unclassified	root	N/A	4.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.34 %
Unclassified	root	N/A	4.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	33.10 %
Unclassified	root	N/A	4.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	16.55 %
Unclassified	root	N/A	4.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.38 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	11.72 %
Unclassified	root	N/A	4.83 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	4.14 %
Actinobacteria bacterium IMCC26207	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26207	1.38 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	0.69 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	11.03 %
Unclassified	root	N/A	4.83 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	4.14 %
Actinobacteria bacterium IMCC26207	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26207	1.38 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.69 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	11.03 %
Unclassified	root	N/A	4.83 %
Ilumatobacter nonamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	2.07 %
Actinobacteria bacterium IMCC26207	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26207	1.38 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.69 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig877495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
2170459009\|GA8DASG02H7INS	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
2228664021\|ICCgaii200_c0619753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14223381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300000956\|JGI10216J12902_102841912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	514	Open in IMG/M
3300000956\|JGI10216J12902_105500963	Not Available	848	Open in IMG/M
3300000956\|JGI10216J12902_111246789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300000956\|JGI10216J12902_111310200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	847	Open in IMG/M
3300000956\|JGI10216J12902_113503962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300000956\|JGI10216J12902_113712573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300001793\|JGI24113J20146_1026995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300002568\|C688J35102_118716845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	588	Open in IMG/M
3300002568\|C688J35102_120707977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1392	Open in IMG/M
3300003312\|P12013IDBA_1000318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33631	Open in IMG/M
3300003313\|P32013IDBA_1007840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	5359	Open in IMG/M
3300003315\|P22013IDBA_10054883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1171	Open in IMG/M
3300003970\|Ga0063602_105095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300004114\|Ga0062593_100658479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300004114\|Ga0062593_100681554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	998	Open in IMG/M
3300004114\|Ga0062593_101502866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	726	Open in IMG/M
3300004153\|Ga0063455_100130782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300004156\|Ga0062589_101057534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	764	Open in IMG/M
3300004156\|Ga0062589_101869256	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300004156\|Ga0062589_102081253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300004156\|Ga0062589_102728458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300004157\|Ga0062590_100652092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	937	Open in IMG/M
3300004157\|Ga0062590_100889441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	832	Open in IMG/M
3300004157\|Ga0062590_101900619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	614	Open in IMG/M
3300004463\|Ga0063356_105432742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300004480\|Ga0062592_100421071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1071	Open in IMG/M
3300004643\|Ga0062591_101119088	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300004643\|Ga0062591_101948466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	604	Open in IMG/M
3300004643\|Ga0062591_102307959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300005093\|Ga0062594_101574910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	679	Open in IMG/M
3300005179\|Ga0066684_10590876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	745	Open in IMG/M
3300005330\|Ga0070690_100253261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	1246	Open in IMG/M
3300005337\|Ga0070682_101002606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	693	Open in IMG/M
3300005367\|Ga0070667_101976601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	549	Open in IMG/M
3300005457\|Ga0070662_101071526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	691	Open in IMG/M
3300005458\|Ga0070681_11240414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	668	Open in IMG/M
3300005458\|Ga0070681_11910632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300005529\|Ga0070741_10000505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	140688	Open in IMG/M
3300005529\|Ga0070741_10001561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	69010	Open in IMG/M
3300005546\|Ga0070696_101756450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005563\|Ga0068855_101142542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	812	Open in IMG/M
3300005569\|Ga0066705_10460216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300006031\|Ga0066651_10634911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300006051\|Ga0075364_10673425	Not Available	706	Open in IMG/M
3300006051\|Ga0075364_11012719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300006800\|Ga0066660_11489930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300006854\|Ga0075425_102458715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300006881\|Ga0068865_101333984	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300009095\|Ga0079224_100010637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12636	Open in IMG/M
3300009095\|Ga0079224_101883131	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300009098\|Ga0105245_11329279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	768	Open in IMG/M
3300009098\|Ga0105245_11612203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	701	Open in IMG/M
3300009120\|Ga0117941_1166108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300009156\|Ga0111538_11742960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	784	Open in IMG/M
3300009156\|Ga0111538_13306707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	561	Open in IMG/M
3300009174\|Ga0105241_10250291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1502	Open in IMG/M
3300009176\|Ga0105242_12929835	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009177\|Ga0105248_12368376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	605	Open in IMG/M
3300010335\|Ga0134063_10683421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	529	Open in IMG/M
3300012188\|Ga0136618_10030248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2405	Open in IMG/M
3300012527\|Ga0136633_1007134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26207	6517	Open in IMG/M
3300012529\|Ga0136630_1244683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300012531\|Ga0136640_10261203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	740	Open in IMG/M
3300012989\|Ga0164305_11566060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	587	Open in IMG/M
3300012989\|Ga0164305_11994818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	529	Open in IMG/M
3300013297\|Ga0157378_10728487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1013	Open in IMG/M
3300013297\|Ga0157378_12858878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	535	Open in IMG/M
3300013306\|Ga0163162_11010521	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300014745\|Ga0157377_11399760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300014968\|Ga0157379_11393043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	679	Open in IMG/M
3300014969\|Ga0157376_10493570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300015163\|Ga0167665_1009735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1954	Open in IMG/M
3300015371\|Ga0132258_10225607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4561	Open in IMG/M
3300015371\|Ga0132258_11743200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1570	Open in IMG/M
3300015371\|Ga0132258_13024445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1165	Open in IMG/M
3300015372\|Ga0132256_101965716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	691	Open in IMG/M
3300015373\|Ga0132257_102309359	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300015374\|Ga0132255_100521452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1748	Open in IMG/M
3300015374\|Ga0132255_103260021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300017540\|Ga0180217_1000252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	100449	Open in IMG/M
3300017540\|Ga0180217_1007323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7799	Open in IMG/M
3300017646\|Ga0182737_1040027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300017652\|Ga0182746_1240658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300017787\|Ga0183260_10004345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11269	Open in IMG/M
3300017787\|Ga0183260_10601620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300017965\|Ga0190266_11016038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300018422\|Ga0190265_10163211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2196	Open in IMG/M
3300018422\|Ga0190265_10544970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1276	Open in IMG/M
3300018429\|Ga0190272_11163060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	754	Open in IMG/M
3300018429\|Ga0190272_11732518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300018432\|Ga0190275_10236765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1752	Open in IMG/M
3300018432\|Ga0190275_10582508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1164	Open in IMG/M
3300018432\|Ga0190275_11150781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300018432\|Ga0190275_12902354	Not Available	554	Open in IMG/M
3300018465\|Ga0190269_10002392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8700	Open in IMG/M
3300018465\|Ga0190269_10002726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8090	Open in IMG/M
3300018465\|Ga0190269_10006234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5407	Open in IMG/M
3300018465\|Ga0190269_10142015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300018465\|Ga0190269_10151425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1201	Open in IMG/M
3300018465\|Ga0190269_10625814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	734	Open in IMG/M
3300018465\|Ga0190269_11099499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	613	Open in IMG/M
3300018468\|Ga0066662_11299002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300018468\|Ga0066662_11367788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	730	Open in IMG/M
3300018468\|Ga0066662_12927381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300018469\|Ga0190270_12358344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300018476\|Ga0190274_11544526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	756	Open in IMG/M
3300018481\|Ga0190271_12439643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	626	Open in IMG/M
3300019377\|Ga0190264_10589241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300020012\|Ga0193732_1000316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9253	Open in IMG/M
3300020060\|Ga0193717_1046770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1558	Open in IMG/M
3300020078\|Ga0206352_10489099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	542	Open in IMG/M
3300020215\|Ga0196963_10562202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	520	Open in IMG/M
3300025514\|Ga0208490_101903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26207	6804	Open in IMG/M
3300025919\|Ga0207657_10146335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1927	Open in IMG/M
3300025920\|Ga0207649_10147404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1617	Open in IMG/M
3300025926\|Ga0207659_10670462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	887	Open in IMG/M
3300025932\|Ga0207690_10169013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1636	Open in IMG/M
3300025937\|Ga0207669_11456520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	584	Open in IMG/M
3300028006\|Ga0247717_1081654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	511	Open in IMG/M
3300028722\|Ga0307319_10252200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300030006\|Ga0299907_10253742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1444	Open in IMG/M
3300030336\|Ga0247826_10527959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	896	Open in IMG/M
3300030606\|Ga0299906_10512166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300031228\|Ga0299914_10112331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2401	Open in IMG/M
3300031228\|Ga0299914_11469211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300031228\|Ga0299914_11476825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300031229\|Ga0299913_10004261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11971	Open in IMG/M
3300031229\|Ga0299913_11308841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300031229\|Ga0299913_11554106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	614	Open in IMG/M
3300031548\|Ga0307408_102134363	Not Available	540	Open in IMG/M
3300031824\|Ga0307413_10762934	Not Available	810	Open in IMG/M
3300031824\|Ga0307413_11165325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300031824\|Ga0307413_12200602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300031911\|Ga0307412_12017813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300032002\|Ga0307416_100441672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1351	Open in IMG/M
3300033407\|Ga0214472_11691505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300033412\|Ga0310810_10810893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	843	Open in IMG/M
3300033417\|Ga0214471_10068540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2905	Open in IMG/M
3300034384\|Ga0372946_0652884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.10%
Host-Associated	Host-Associated	26.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.59%
Plants	Host-Associated → Plants	26.90%
Aquatic	Environmental → Aquatic	5.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.90%
Freshwater	Environmental → Aquatic → Freshwater	4.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.38%
Roots	Host-Associated → Plants → Roots	1.38%
Sediment	Environmental → Aquatic → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.10%
Loam	Environmental → Terrestrial → Soil → Loam	5.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.52%
Ice	Environmental → Aquatic → Freshwater → Ice	4.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.76%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.38%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.38%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.34%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	5.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.52%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.07%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.69%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	5.52%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.14%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.07%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.07%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	1.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.38%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	1.38%
Serpentinite Rock And Fluid	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Serpentinite Rock And Fluid	1.38%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.38%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.69%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.69%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.69%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001793	Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR11Aug_CSWold	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003312	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P1 sample	Environmental	Open in IMG/M
3300003313	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sample	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300003970	Enrichment cultures from Lake Fryxell 39872	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015163	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1b, glacier snout)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017540	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017646	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017652	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 30_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300025514	Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR11Aug_CSWold (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028006	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-4-E_N	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_07120590	2124908045	Soil	VLLADLTPPLFVVLVMLEFPVIMALIDCWNRPEDHFAEGAADREAWIKWLIVAVITVPILLGFGIVLGYYYAVVRRNSPASRS
F47_00029580	2170459009	Grass Soil	VSGSSFGDVPWWLILLGLEFPAIMATIDCWMRPEEHFAGGADDQRSWKGWLVVAILTVPILVGYGIVIGYYFAVVRRNSPSAGG
ICCgaii200_06197532	2228664021	Soil	VIPPWPLLVLMLEFPVVMALLDCSQRPADHFAEGPEDRVAWLRWLVVAVLTVPVLLGYGIVLGYYFAVVRRSSPTSPR
ICChiseqgaiiFebDRAFT_142233812	3300000363	Soil	VIPPWPLLVLMLEFPVLMALLDCWQRPADHFAEGAEDRVAWLRWLLVAVVTVPVLLGYGIVLGYYFAVVRRNSPAAR*
JGI10216J12902_1028419121	3300000956	Soil	MLLADLTPPLPVFLVLLEFPVIMALLDCWHRPEEHFADGAADRQAWIRWLLVAVVTVPILIGFGIVLG
JGI10216J12902_1055009632	3300000956	Soil	VLLADLTPPLPVLLVLMEFPVVMALLDCWQRPPEHFADGDADRTAWIRWLIVAVITVPILLGYGIVLGYYYAVVRRNSPASRG*
JGI10216J12902_1112467891	3300000956	Soil	MLLAALTPPLLVVLVLIEFPVIMALIDCWNRPVDHFADGAADREAWIKWLVVAVLTVPILLGFGIVLGYYYAVVRRNSPASGS*
JGI10216J12902_1113102003	3300000956	Soil	VLLAYLTPPLPVLLLLMEFPVIMALLDCWQRPTEHFADGDADRRAWIRWLVVAVITVPILLGYGIVLGYYYAVVRRNSPASR
JGI10216J12902_1135039622	3300000956	Soil	MLLADLTPPVPIVLLLIEFPVIMALIDCWQRPEDHFADGAADRTAWIRWLLVAVVTVPILIGFGIVLGYYYAVVRRNSPASRG*
JGI10216J12902_1137125731	3300000956	Soil	MLLADLTPPLPVLLVLIEFPVIMALLDCWQRPVEHFADGAADRKAWIRWLLVAVVTVPILIGFGIVLG
JGI24113J20146_10269952	3300001793	Serpentinite Rock And Fluid	VIPPWPLLVLMLEFPVLMALLDCWQRPEDHFAEGAADRRAWLRWLLVAVVTIPVLVGYGIVLGYYYAVVRRSSPASPR*
C688J35102_1187168452	3300002568	Soil	VSEVPWWIILLGLEFPAITALIDCWFRPPDHFPEGARDQRAWRGWLIVAVLTVPILLGYGIVIGYYYAVVRRNSPSGSG*
C688J35102_1207079773	3300002568	Soil	VSGSSFGDAPWWLILLGLEFPAIMATIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
P12013IDBA_100031821	3300003312	Ore Pile And Mine Drainage Contaminated Soil	MIPPWPLLLLMLEFPVVMALLDCWQRPADHFDQGPEDRRAWLRWLIVAVVTVPVLLGYGIVLGYYFAVVRRSSPASRS*
P32013IDBA_10078405	3300003313	Ore Pile And Mine Drainage Contaminated Soil	VIPPWPLLVLMLEFPVLMALLDCWQRPEDHFAEGASDRRAWLRWLVVAVVTIPVLVGYGIVLGYYYGVVRRNSPAAPR*
P22013IDBA_100548831	3300003315	Ore Pile And Mine Drainage Contaminated Soil	VTPPWPLLVLMLEFPVIMALLDCWQRPVDHFAEGAPDRRVWLRWLGVAVLTVPVLLGYGIVLGYYFAVVRRNSPASPR*
Ga0063602_1050951	3300003970	Freshwater	MTPPLPLLLLLLEFPVLMALLDCWQRPEEHFAGGAEDRRSWLKWLGVGVLTVPVLLGFGIVLGYYHSVIRRNSPASRS*
Ga0062593_1006584792	3300004114	Soil	MLVADMTPSLPVVLLLLEFPVVMALLDCWHRPEEHFAEGAADRKAWIRWLIVAVITVPILIGFGIVLGYYYAVVRRNSPASRS*
Ga0062593_1006815542	3300004114	Soil	VSEVPWPLILLGLEFPAITALIDCWFRPADQFAGGATDQRAWRGWLIVAVLTVPILIGYGILIGYYYAVVRRNSPSGSP*
Ga0062593_1015028662	3300004114	Soil	MLLAALTPSWPVVLAMLEFPVVMALLDCWQRPEEHFAGGAPDRKAWIRWLLVAAVTVPILLGFGIVLGYYYAVVRRN
Ga0063455_1001307823	3300004153	Soil	QRVSGSSFGDAPWWLILLGLEFPAIMATIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0062589_1010575342	3300004156	Soil	MLLAALTPSWPVVLAMLEFPVVMALLDCWQRPEEHFAGGAPDRKAWIRWLLVAAVTVPILLGFGIVLGYYYAVV
Ga0062589_1018692562	3300004156	Soil	MLVADMTPSLPVVLLLLEFPVVMALLDCWHRPEEHFADGAADRKAWIRWLIVAVITVPILIGFGIVLGYYYAVVRRNSPASRS*
Ga0062589_1020812531	3300004156	Soil	MLADMTPSLPVVLLLLEFPVVMALLDCWQRPEEHFADGAADRTAWLRWLVVAVITVPILLGFGIVLGYYYAVVRRNSPASRS*
Ga0062589_1027284581	3300004156	Soil	VTVPPYWLVLLLSEVPAIAAAIDCWFRPPEQFAEGEADRVAWLRWLAVALITVPILIGYGIVLGYYFAVIKRNSPNNPS*
Ga0062590_1006520922	3300004157	Soil	LDVPWPLILLGLELPAVMALLDCYNRPPDHFLGGAADRRSWLGWLVVGVLLVPILVGYGVVIGYYYVVVKRNSPASRD*
Ga0062590_1008894412	3300004157	Soil	VSGSSFGDVPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0062590_1019006192	3300004157	Soil	ASEGARGPGRERRVSGSSFGDVPWWLILLGLEFPAIMAMIDCWLRPEEHFAGGADDQRSWKGWLVVAILTVPILVGYGIVIGYYFAVVRRNSPSAGG*
Ga0063356_1054327421	3300004463	Arabidopsis Thaliana Rhizosphere	MLLADLTPSLPVVLLLLEFPVVMALLDCWQRPEEHFAEGAADRKAWIRWLIVAVITVPILIGFGIVLGYYYAVVRRNSPASRS*
Ga0062592_1004210712	3300004480	Soil	MLLADLTPPWPVLLLLLEFPVIMALLDCWNRPEEHFAEGAADRKAWMRWLFVAVLTVPILIGFGIVLGYYYAVVRRNSPASRS*
Ga0062591_1011190882	3300004643	Soil	VILAQGIPDLPLPLLLLGLEFPAIMAMLDCTFRTPDQFLGGEADRRSWLGWLVVAILTVPILLGYGILIGYYYA
Ga0062591_1019484661	3300004643	Soil	FGDVPWWLILLGLEFPAIMAMIDCWLRPEEHFAGGADDQRSWKGWLVVAILTVPILVGYGIVIGYYFAVVRRNSPSAGG*
Ga0062591_1023079591	3300004643	Soil	GMLLAALTPPWPVVLAMLEFPVVMALLDCWQRPEEHFAGGAPDRKAWIRWLLVAAVTVPILLGFGIVLGYYYAVVRRNSPASGG*
Ga0062594_1015749101	3300005093	Soil	VNGSSFGDAPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVI
Ga0066684_105908761	3300005179	Soil	VTGSSFADVPWPLILLGLEFPAIMAILDCWFRPIDHFLGGADDQKAWKGWLAIGILTVPILLGYGIVIGYYFAVVRRNSPSGHG*
Ga0070690_1002532613	3300005330	Switchgrass Rhizosphere	VNGSSFGDAPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRN
Ga0070682_1010026061	3300005337	Corn Rhizosphere	GLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0070667_1019766012	3300005367	Switchgrass Rhizosphere	RVSGSSFGDAPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0070662_1010715262	3300005457	Corn Rhizosphere	VSGSSFGDAPWWLILLGLEFPAIMAMIDCWLRPADHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAV
Ga0070681_112404141	3300005458	Corn Rhizosphere	VSGSSFGDVPWWLIVLGLEFPAIMATIDCWLRPVEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0070681_119106322	3300005458	Corn Rhizosphere	VNDLPWPLLLLGLEFPAVMALLDCWFRPADHFAEGASDQKAWKGWLIVAVVTVPILLGYGIIMGYYYAVVRRNSPSNPG*
Ga0070741_1000050533	3300005529	Surface Soil	VSGSPLADIPWPLVLAGLEFPAVMALLDCWFRPSDHFAGGQSDQRSWKGWLVVAVVTVPVLIGYGIVIGYYYAVVRRNSPSSGG*
Ga0070741_1000156161	3300005529	Surface Soil	VNGSPLANIPWPLVLLGLEFPAVTALLDCWFRPPDHFEGGEADQRSWKGWLVVAVLTVPVLLGYGILIGYYFVVVRRNSPSSGR*
Ga0070696_1017564502	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSGTSFADVPWPLILLGLEFPAIMALLDCWFRPIDHFEGGADDQRSWKGWLVVGVLTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0068855_1011425422	3300005563	Corn Rhizosphere	VSGSSFGDAPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0066705_104602162	3300005569	Soil	VSGSSFGDVPWPLILLGLEFPAIMALLDCWFRPVDHFEGGADDQKGWKGWLVVGVLTVPILLGYGIVIGYYFAVVRRNSPSGGG*
Ga0066651_106349112	3300006031	Soil	VSGSPFADAPWPLILLGLEFPALMALLDCWFRPVDHFEGGADDQKGWKGWLVVGVLTVPILLGYGIVIGYYFAVVRRNSPSGGG*
Ga0075364_106734251	3300006051	Populus Endosphere	MLLADLTPTLPVLLLLLEFPVVMALLDCWNRPEEHFADGAADRKAWIMWLLVAVVTVPILIGFGIVLGYYYAVVRRNSPASRS*
Ga0075364_110127192	3300006051	Populus Endosphere	VTPPWPLVLLGLELPVIVALLDCYNRPPEHFQGGAEDRKAWVRWLIVAVPTAPILLGYGIVLGYYYSVVRRNSPASRG*
Ga0066660_114899302	3300006800	Soil	VSGSSFADVPWPLILLGLEFPALMALLDCWFRPVDHFEGGADDQRAWKGWLAVGILTVPILLGYGIVIGYYFAVVRRNSPSGHG*
Ga0075425_1024587152	3300006854	Populus Rhizosphere	VTDVPWPLILLGLEFPAITALIDCCFRPPDHFAEGAADQRAWRGWLIVAIVTVPILLGYGIIIGYYYAVVRRNSPSGTG*
Ga0068865_1013339842	3300006881	Miscanthus Rhizosphere	VNDYGLSNLPWPLLLLGLEFPAVMALLDCWFRPADHFAEGASDQKAWKGWLIVAVVTVPILLGYGIIMGYYYAVVRRNSPSNPG*
Ga0079224_1000106375	3300009095	Agricultural Soil	VIPPWPLLLLLLEFPVLMALLDCWQRPVDHFAGGAADRRAWRRWLLVAVVTIPVLVGYGIVLGYYYAVVRRSSPSAPG*
Ga0079224_1018831311	3300009095	Agricultural Soil	MLEFPVLMALLDCWQRPEEHFAEGAADRRAWLRWLVVAVVTVPVLLGYGIVLGYYYAVVRRNSPAAPR*
Ga0105245_113292792	3300009098	Miscanthus Rhizosphere	VNGSSFGDAPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0105245_116122032	3300009098	Miscanthus Rhizosphere	VSGSSFGDVPWWLILLGLEFPAIMAMIDCWLRPEEHFAGGADDQRSWKGWLVVAILTVPILVGYGIVIGYYFAVVRRNSPSAGG*
Ga0117941_11661082	3300009120	Lake Sediment	MLEFPVIMALLDCWQRPVDHFAEGADDRRAWLRWLAVAVVTVPVLLGYGIVLGYYFAVIRRNSPASPR*
Ga0111538_117429602	3300009156	Populus Rhizosphere	VDVPWWLVVLGLEFPALMALVDCSQRPPEHFKEGAADRRSWLRWLVVGVLTVPVLVGYGIVLGYYFSVVRRNSPTAPG*
Ga0111538_133067071	3300009156	Populus Rhizosphere	RHLPAPPGTRVPVNLPWWLVLLGLEFPALMALLDCTNRPPEHFAGGAPGRRSWLGWLVVGVLTVPILVGYGIVIAYYFAVVRRNSPASPR*
Ga0105241_102502912	3300009174	Corn Rhizosphere	VNDYGLSNLPWPLLLLGLEFPAVMALLDCWFRPADHFAEGASDQKAWKGWLIVAVVTVPILLGYGIIMGYYYAVVRRNSPSGPG*
Ga0105242_129298351	3300009176	Miscanthus Rhizosphere	VNDYGLSNLPWPLLLLGLEFPAAMALLDCWFRPADHFAEGASDQRAWKGWLIVAVVTVPILLGYGIIMGYYY
Ga0105248_123683762	3300009177	Switchgrass Rhizosphere	RSPTRSPNPVNDYGLSNLPWPLLLLGLEFPAVMALLDCWFRPADHFAEGASDQKAWKGWLIVAVVTVPILLGYGIIMGYYYAVVRRNSPSNPG*
Ga0134063_106834212	3300010335	Grasslands Soil	MPWPLILLGLEFPAIMALLDCWFRPVDHFEGGADDQKGWKGWLVVGVLTVPILLGYGIVIGYYFAVVRRNSPSGGG*
Ga0136618_100302483	3300012188	Polar Desert Sand	VIATLTPSLPLFLLLLEFPIVAAVLDCWQRPADHFLEGAEDRRAWLRWLAVAVVTAPILLGFGIVLGYYYAVVRRNSPASRS*
Ga0137374_100047803	3300012204	Vadose Zone Soil	MLAAGPFADVNWPLLALGLEFPVLLALLDCFNRPIDHFANSAPDRRSWLGWLAVAVITVPVLVGYGIVIGYHFSVVRRNTPASRGWDTMPR*
Ga0137368_106722731	3300012358	Vadose Zone Soil	MLAAGPFADVNWPLLALGLEFPVLLALLDCFNRPIDHFANSAPDRRSWLGWLAVAVITVPVLVGYGIVIGYHFSVVRRNTPASRGWDTMPR
Ga0136633_100713410	3300012527	Polar Desert Sand	LFLVLLEFPVVAAVLDCWQRPDEHFLEGADDRRAWLRWLAVAVATAPILLGFGIVLGYYYAVVRRNSPASRS*
Ga0136630_12446832	3300012529	Polar Desert Sand	VIASLTPSLPLFLLLLEFPVVTALLDCWQRPPDHFLEGADDRKAWLRWLAVAVVTAPILLGFGIVLGYYYAVVRRNSPASRS*
Ga0136640_102612032	3300012531	Polar Desert Sand	ASLTPSLPLFLLLLEFPVVAAVLDRWQRPEEHFSEGAEDRKAWLRWLAVAVVTAPILLGFGIVLGYYYAVVRRNSPASRS*
Ga0164305_115660601	3300012989	Soil	VSGSSFGDVPWWLILLGLEFPAIMAMIDCWLRPADHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0164305_119948181	3300012989	Soil	LPWPLLLLGLEFPAVMALLDCWFRPADHFAEGASDQKAWKGWLIVAVVTVPILLGYGIIMGYYYAVVRRNSPSNPG*
Ga0157378_107284872	3300013297	Miscanthus Rhizosphere	LADVPWPLILLGLEFPALMALLDCWFRPADHFEGGAMDQRAWRGWLIVSVLTVPILLGYGIVMGYYFAVVRRNSPSGQG*
Ga0157378_128588781	3300013297	Miscanthus Rhizosphere	MPEATMNDYGLANIPWPLILLGLEFPALMSVLDCWFRPPDHFLGGAKDQRAWKGWLIVAVLTVPILLGYGIVMGYYH
Ga0163162_110105211	3300013306	Switchgrass Rhizosphere	FGDAPWWLILLGVEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0157377_113997602	3300014745	Miscanthus Rhizosphere	VSGSSFGDVPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILVGYGIVIGYYFAVVRRNSPSAGG*
Ga0157379_113930431	3300014968	Switchgrass Rhizosphere	LLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0157376_104935703	3300014969	Miscanthus Rhizosphere	LILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG*
Ga0167665_10097353	3300015163	Glacier Forefield Soil	MLEFPVLMAVLDCWQRPADQFAEGAEDRIAWLRWLAVAVVTVPVLLGYGIVLGYYFAVIRRNSPASPR*
Ga0132258_102256073	3300015371	Arabidopsis Rhizosphere	VSDVPWPLILLGLEFPAVMALIDCWFRPADHFAEGASDQKAWRGWLVVAVLTVPILLGYGIVIGYYYAVVRRNSPSGSG*
Ga0132258_117432002	3300015371	Arabidopsis Rhizosphere	VDVPWPLILLGLELPAVMALLDCYNRPPDHFGGGAADRRSWLGWLVVGVLLVPILVGYGVVIGYYYVVVKRNSPASRD*
Ga0132258_130244453	3300015371	Arabidopsis Rhizosphere	VSGSSFGDVPWWLILLGLEFPAIMAIIDCWLRPAEHFAGGEDDQRSWKGWLVVAILTVPILVGYGIVIGYYFAVVRRNSPSAGG*
Ga0132256_1019657161	3300015372	Arabidopsis Rhizosphere	PGSGVPVTERSRPAMAEVPWPLILLGLEFPAAMALLDCWFRPPEHFAEGAADQRAWRGWLIVAVLTVPILLGYGIVIGYYFAVVRRNSPSSGR*
Ga0132257_1023093592	3300015373	Arabidopsis Rhizosphere	VSNVPWPLILLGLEFPAVMALIDCWFRPADHFAEGASDQKAWRGWPVVAVLTVPILLGYGIVIGYYYAVVRRNSPSGSG*
Ga0132255_1005214523	3300015374	Arabidopsis Rhizosphere	VNGSSFGDVPWWLILLGLEFPAIMAMIDCSLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAGVRRNSPSSGG*
Ga0132255_1032600212	3300015374	Arabidopsis Rhizosphere	VSGSSFGDVPWWLILLGLEFPAIMAIIDCWLRPAEHFAGGEDDQRSWKGWLVVAILTLPILVGYGIVIGYYFAVVRRNSPSAGG*
Ga0180217_100025257	3300017540	Compost	VVPPWWLLIPMLEFPVLMALLDCWQRPPEHFAEGAEDRRAWLRWLLVAVLTVPVLLGYGIILGYFYAVVRRNSPASPR
Ga0180217_10073236	3300017540	Compost	VIPPWPLLVLLLEFPVLMALLDCWQRPAEQFAEGAADRRAWLRWLLVAVVTIPVLVGYGIVLGYYYAVVRRRSPSAPG
Ga0182737_10400273	3300017646	Compost	VIPPWPLLVLMLEFPVIMALLDCWQRPGEHFGEGAEDRRAWLRWLLVAVVTIPVLLGYGIVLGYYFAVVRRNSP
Ga0182746_12406581	3300017652	Compost	AVVIPPWPLLVLMLEFPVIMALLDCWQRPGEHFGEGAEDRRAWLRWLLVAVVTIPVLLGYGIVLGYYFAVVRRNSPAAPR
Ga0183260_1000434513	3300017787	Polar Desert Sand	VIATLTPSLPLFLLLLEFPIVAAVLDCWQRPADHFLEGAEDRRAWLRWLAVAVVTAPILLGFGIVLGYYYAVVRRNSPASRS
Ga0183260_106016202	3300017787	Polar Desert Sand	VIASLTPSLPLFLVLLEFPVVAAVLDCWQRPEEHFVGGAEDRRSWLRWLAVAVVTAPILFGFGIVLGYYYAVVRRNSPASRP
Ga0190266_110160382	3300017965	Soil	VLLADLTPPLPVFLVLLEFPVIMALLDCWHRPEEHFADGAADRQAWIRWLLVAVVTVPILIGFGIVLGYYYAVVRRNSPASRS
Ga0190265_101632113	3300018422	Soil	VLADLTPSLPLFLVLLEFPVVTALIDCWQRPADQFVDGEADRRAWFRWLIVAVITAPILIGFGIVLGYYYAVVRRSSPASRR
Ga0190265_105449701	3300018422	Soil	VTPPLWLVVIGLEFPVIMALLDCWQRPPEHFLQGAEDRVAWLRWLAVAVITVPVLLGYGIVLGYYFAVVRRNSPAARP
Ga0190272_111630602	3300018429	Soil	EFPVVMALLDCWQRPPEQFLQGAPDRIAWLRWLAVAVVTVPVLLGYGIVLGYYFAVVRRNSPAARP
Ga0190272_117325182	3300018429	Soil	VTPPLWLVLLGLEFPVMMALLDCWHRPPEHFKDGADDRIAWLKWLGVAVVTVPVLLGYGIVLGYYFAVIRRNNPAARS
Ga0190275_102367652	3300018432	Soil	VTPPLPLLILMLEFPVIMALLDCWQRPPEHFNEGAEDRVAWLRWLGVAVVTIPILLGYGIVLGYYFAVIRRNNPAARS
Ga0190275_105825081	3300018432	Soil	VIGSVLAALTPSLPLFLVLLEFPVVTALIDCWQRPPDQFLEGEDDRRAWIRWLIVAVITAPILIGFGIVLGYYYAVVRRNSPYTRR
Ga0190275_111507812	3300018432	Soil	VTPSLPVFLLLLEFPVFAAVLDCWQRPEEHFVGGAADRRAWLRWLAVAVVTAPILLGFGIVLGYYYAVVRRGSPYTRR
Ga0190275_129023541	3300018432	Soil	PLWLVVIGLEFPVLMALLDCWGRPPEHFLQGAEDRTAWLRWLAVAVVTVPVLLGYGIVLGYYFSVVRRNSPAARP
Ga0190269_100023924	3300018465	Soil	VIPPWPLLLLMLEFPVLMALLDCWQRPEDHFAEGAADRRAWLRWLLVAVVTIPVLVGYGIVLGYYYGVVRRNSPAAPR
Ga0190269_100027264	3300018465	Soil	VIPPWPLLLLMLELPVLMALLDCWQRPEDQFLEGASDRRAWLRWLAVAVVTIPVLVGYGIVLGYYYAVVRRNSPASPR
Ga0190269_100062343	3300018465	Soil	VIPPWPLLVLMLEFPVLMAVLDCWQRPEDHFAGGVEDRRAWLRWLGVAVVTVPVLLGYGIVLGYYFAVVRRSSPSSPR
Ga0190269_101420153	3300018465	Soil	VIPPWPLLVLMLEFPVLMALLDCWQRPPDHFAEGADDRRAWLRWLVVAVVTVPVLLGYGIVLGYYYAVVRRSSPSSPR
Ga0190269_101514251	3300018465	Soil	PARCVPRRLVTPPFWLVLLGLEFPVVMALLDCWQRPPEHFQDGAEDRRAWLRWLLVAVVTVPILLGFGIVLGYYFAVVRRNSPAARS
Ga0190269_106258142	3300018465	Soil	VTPPLPLVLLGLEFPVLMALLDCWQRPPEHFKDGAEDRTAWLRWLLVAVVTVPILLGFGIVLGYYVAVVRRNSPAARS
Ga0190269_110994991	3300018465	Soil	MTTPPWPLLLLLLEFPVIMALLDCWQRPEDHFAEGAADRRAWLRWLAVAVVTVPILLGYGIVLGYHFVVVRRNSPASPG
Ga0066662_112990022	3300018468	Grasslands Soil	VSTSVAEIPWPLILLGLEFPALMALLDCWFRPPDHFQDGAGDQRAWKGWLVVAILTVPILLGYGIVIGYYYAVVRRNSPSGPG
Ga0066662_113677882	3300018468	Grasslands Soil	VSGSSFADVPWPLILLGLEFPALMALLDCWFRPVDHFEGGADDQRAWKGWLVVGILTVPILLGYGIVIGYYFAVVRRNSPSG
Ga0066662_129273811	3300018468	Grasslands Soil	VTGSSFADVPWPLLLLGLEFPAIMPILDCWFRPIDHFLGGADDQKAWKGWLAIGILTVPILLGYGIVIGYYFAVVRRNSPSGHG
Ga0190270_123583442	3300018469	Soil	VLLAYLTPPLPVLLVLMEFPVIMALLDCWQRPPDHFADGEDDRKAWMRWLVVAVITVPILLGYGIVLGYYYAVVRRNSPASRS
Ga0190274_115445262	3300018476	Soil	VLADLTPSLPLFLILLEFPVVTALIDCWQRSPDDFADGAEDRTAWIRWLIVAVITAPILIGFGIVLGYYYAVVRRGSPSRR
Ga0190271_124396431	3300018481	Soil	VNGVLFADLTPPLPILLLLLEFPVVMALIDCWNRPVDHFAEGESDRKAWIGWLIVAVITVPILLGFGIVL
Ga0190264_105892412	3300019377	Soil	MTPPWPLLILMLEFPVIMAVLDCWQRPVDHFAEGADDRKAWMRWLAIAVVTVPVLLGYGIVLGYYYAVVRRNSPASPH
Ga0193732_10003169	3300020012	Soil	VNDYGLANIPWPLILLGLEFPALMALLDCWFRPPDHFLGGASDQRAWKGWLLVAVLTVPILLGYGIVIGYYYAVVRRNSPSNPG
Ga0193717_10467701	3300020060	Soil	RWRSGSSCRCSALGCAGCGAPATERSNPVNDYGLANIPWPLILLGLEFPALMALLDCWFRPPDHFLGGATDQRAWKGWLLVAIVTVPILLGYGIVIGYYYAVVRRNSPSNPG
Ga0206352_104890991	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	GLEFPAIMATIDCWLRPVEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG
Ga0196963_105622022	3300020215	Soil	LVLMLEFPVIMALLDCWQRPEDHFTDGAEDRTAWLRWLAVAVVTVPVLLGYGIVLGYYYAVVRRNSPASPH
Ga0208490_1019034	3300025514	Serpentinite Rock And Fluid	VIPPWPLLVLMLEFPVLMALLDCWQRPEDHFAEGAADRRAWLRWLLVAVVTIPVLVGYGIVLGYYYAVVRRSSPASPR
Ga0207657_101463353	3300025919	Corn Rhizosphere	VSGSSFGDAPWWLILLGLEFPAIMAMFDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG
Ga0207649_101474042	3300025920	Corn Rhizosphere	VSGSSFGDVPWWLIVLGLEFPAIMATIDCWLRPVEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG
Ga0207659_106704622	3300025926	Miscanthus Rhizosphere	VSEVPWPLILLGLEFPAITALIDCSFRPPDHFADGARDQRAWRGWLIVAVLTVPILIGYGILIGYYYAVIRRNIPGV
Ga0207690_101690133	3300025932	Corn Rhizosphere	VSGSSFGDVPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG
Ga0207669_114565202	3300025937	Miscanthus Rhizosphere	VSGSSFGDVPWWLILLGLEFPAIMAMIDCWLRPAEHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPS
Ga0247717_10816542	3300028006	Soil	LMLEFPVIMALLDCWQRPPDHFTDGAQDRQAWMRWLAVAVVTVPVLLGYGIVLGYYFGVVQKNSPSSPR
Ga0307319_102522002	3300028722	Soil	VNDYGLTNLPWPLILLGLEFPAAMALLDCWFRPPDHFLGGATDQRAWKGWLIVAILTVPILLGYGIVIGYYYAVVRRNSPSGPA
Ga0299907_102537423	3300030006	Soil	MIPPWPLLVLMLEFPVLMAVLDCWQRPPEHFAEGAEDRRAWLRWLAVAVVTVPVLLGYGIVLGYYFAVVRRNSPTSLH
Ga0247826_105279592	3300030336	Soil	VDVPWPLILLGLELPAVMALLDCYNRPPDHFGGGASDRRSWLGWLVVGVLLVPILVGYGVVIGYYYVVVKRNSPASRD
Ga0299906_105121661	3300030606	Soil	VIPPWPLLVLMLEFPVLMALLDCWQRPVDHFAAGADDRRAWMRWLAVAVVTVPVLLGYGIILGYYYAVVRRNSPASPH
Ga0299914_101123314	3300031228	Soil	MIPPWPLLVLMLEFPVLMAVLDCWQRPADHFAEGAEDRKAWMRWLVVAVLTVPVLLGYGIVLGYYYSVVRRNSPTSPR
Ga0299914_114692111	3300031228	Soil	MTPPLPVLLLMLEFPVLMALLDCWQRPADHFAAGADDRRAWLRWLGVAVVTIPVLLGYGIVLGYYFAVVRRSSPASRS
Ga0299914_114768252	3300031228	Soil	MTPTLPVFLLLLEFPVVAAVLDCWQRPEEHFREGAEDRRAWLRWLAVAVVTAPILLGFGIVLGYYYAVVRRNSPASRG
Ga0299913_100042619	3300031229	Soil	VNDYGLANIPWPLILLGLEFPALMALLDCWFRPPEHFLGGAVDQKAWKGWLIVAVLTVPILLGYGIVIGYYYAVVRRNSPTNPG
Ga0299913_113088412	3300031229	Soil	MQTPPWPLVLLLLEFPVVAALLDCSNRPADHFAEGADDRRAWLKWLWVAVVTVPILLGFGIVLGYYYAVVRRNSPASRP
Ga0299913_115541062	3300031229	Soil	MTPPLPLLLLMLEFPVVMALLDCWQRPEDHFAEGRDDRKAWIRWLLVAVVTVPVLLGYGIVLGYYFAVVRRSSPASRS
Ga0307408_1021343631	3300031548	Rhizosphere	EFPVIMALLDCWQRPPEHFAEGVEDRRAWLRWLWVAVVTVPVLLGFGILLGYYFSVVRRNAPASR
Ga0307413_107629342	3300031824	Rhizosphere	MIPPWPLLVLMLEFPVLMAVLDCWQRPAEHFAEGAEDRTAWLRWLAVAVVTVPVLLGYGIVLGYYFAVVRRNSPTSLH
Ga0307413_111653251	3300031824	Rhizosphere	VTPPWPLVLIGLEFPVIMALLDCWQRPPEHFAEGVEDRRAWLRWLWVAVVTVPVLLGFGILLGYYFSVVRRNAPASR
Ga0307413_122006021	3300031824	Rhizosphere	VTPSLPMFLLLLEFPVIAAVLDCWQRPEDHFREGAEDRRTWLRWLAVAVVTAPLLLGFGIVLGYYYAVVRRNSPASRG
Ga0307412_120178132	3300031911	Rhizosphere	ALVIPPWPLLVLMLEFPVLMAVLDCWQRPAEHFAEGAEDRTAWLRWLAVAVVTVPVLLGYGIVLGYYFAVVRRNSPTSLH
Ga0307416_1004416723	3300032002	Rhizosphere	VIPPWPLLVLMLEFPVLMAVLDCWQRPAEHFAEGAEDRTAWLRWLAVAVVTVPVLLGYGIVLGYYFAVVRRNSPTSLH
Ga0214472_116915051	3300033407	Soil	RLGWSLRPLPPPRREGHVVIPPWPLLVLMLEFPVLMALLDCWQRPVDHFAAGADDRRAWMRWLAVAVVTVPVLLGYGIILGYYYAVVRRNSPASPH
Ga0310810_108108932	3300033412	Soil	VSGSSFGDAPWWLILLGLEFPAIMAMIDCWLRPADHFAGGADDQRSWKGWLVVAILTVPILLGYGIVIGYYFAVVRRNSPSAGG
Ga0214471_100685403	3300033417	Soil	VTPSLPIFLLLLEFPVIAAVLDCGQRPADHFREGAEDRKTWLRWLAVAVVTAPLLLGFGIVLGYYYAVVRRNSPASRG
Ga0372946_0652884_231_479	3300034384	Soil	MLAQGIPDLPLPLLLLGLEFPAIMAMLDCTFRPPEQFKGGAPDRRSWQGWLAVSILTVPILFGYGILIGYYYAVIRRNTPGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050234

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences