Metagenome / Metatranscriptome Family F052021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052021
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	46 residues
Representative Sequence	MKKDKEIELDCSKNCKSVVQACEAEGRSRDECENRYNQCVSNCTFA
Number of Associated Samples	85
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.92 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	80.42 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.930 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (17.483 % of family members)
Environment Ontology (ENVO)	Unclassified (32.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (25.874 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.05% β-sheet: 0.00% Coil/Unstructured: 45.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00171	Aldedh	20.98
PF04070	DUF378	19.58
PF01182	Glucosamine_iso	13.99
PF12225	DUF5981	2.80
PF13458	Peripla_BP_6	2.10
PF13189	Cytidylate_kin2	2.10
PF01590	GAF	2.10
PF13185	GAF_2	2.10
PF00072	Response_reg	1.40
PF07992	Pyr_redox_2	1.40
PF13735	tRNA_NucTran2_2	1.40
PF01565	FAD_binding_4	1.40
PF13686	DrsE_2	1.40
PF00694	Aconitase_C	1.40
PF00085	Thioredoxin	1.40
PF01925	TauE	0.70
PF01597	GCV_H	0.70
PF00472	RF-1	0.70
PF03349	Toluene_X	0.70
PF03480	DctP	0.70
PF00890	FAD_binding_2	0.70
PF02661	Fic	0.70
PF07929	PRiA4_ORF3	0.70
PF08031	BBE	0.70
PF03600	CitMHS	0.70
PF01553	Acyltransferase	0.70
PF02518	HATPase_c	0.70
PF00724	Oxidored_FMN	0.70
PF13492	GAF_3	0.70
PF11225	DUF3024	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	20.98
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	20.98
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	20.98
COG2155	Uncharacterized membrane protein YuzA, DUF378 family	Function unknown [S]	19.58
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	13.99
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.70
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.70
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.70
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	0.70
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.70
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.70
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.70
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.93 %
Unclassified	root	N/A	30.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.93 %
Unclassified	root	N/A	30.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.93 %
Unclassified	root	N/A	30.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.66 %
Unclassified	root	N/A	30.07 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	31.47 %
Unclassified	root	N/A	30.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	31.47 %
Unclassified	root	N/A	30.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.07 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	6.99 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	6.29 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1.40 %
Syntrophorhabdales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.07 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.59 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	3.50 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	2.80 %
Syntrophorhabdaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae	0.70 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.70 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.07 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.59 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	2.80 %
Syntrophorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus	0.70 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.70 %
Desulfomonile	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile	0.70 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.07 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.59 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	2.80 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.70 %
Syntrophorhabdus aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → Syntrophorhabdus aromaticivorans	0.70 %
Desulfomonile tiedjei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	0.70 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000316\|WSSedB2CaDRAFT_1020472	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300000786\|WSSedA2C2DRAFT_1005212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1083	Open in IMG/M
3300000917\|WSSedA2C3DRAFT_1044688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	622	Open in IMG/M
3300001213\|JGIcombinedJ13530_103354356	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300002961\|JGI11641J44799_10036699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → Syntrophorhabdus aromaticivorans	1434	Open in IMG/M
3300002961\|JGI11641J44799_10142991	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300003432\|JGI20214J51088_10070461	All Organisms → cellular organisms → Bacteria	2446	Open in IMG/M
3300003432\|JGI20214J51088_10174300	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300003432\|JGI20214J51088_10237435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1272	Open in IMG/M
3300003432\|JGI20214J51088_10571904	Not Available	717	Open in IMG/M
3300003432\|JGI20214J51088_10624169	Not Available	683	Open in IMG/M
3300003432\|JGI20214J51088_10887477	Not Available	583	Open in IMG/M
3300003432\|JGI20214J51088_10935995	Not Available	568	Open in IMG/M
3300003541\|JGI20214J51650_10001026	All Organisms → cellular organisms → Bacteria	17700	Open in IMG/M
3300003541\|JGI20214J51650_10104115	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300003858\|Ga0031656_10100458	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300003910\|JGI26437J51864_10011724	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300004000\|Ga0055458_10182921	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300004024\|Ga0055436_10314809	Not Available	507	Open in IMG/M
3300004155\|Ga0066600_10028143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1842	Open in IMG/M
3300004155\|Ga0066600_10212402	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	840	Open in IMG/M
3300004282\|Ga0066599_100024447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2109	Open in IMG/M
3300005077\|Ga0071116_1006261	All Organisms → cellular organisms → Bacteria	11209	Open in IMG/M
3300005205\|Ga0068999_10025285	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005827\|Ga0074478_1131652	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005830\|Ga0074473_10243943	Not Available	914	Open in IMG/M
3300005831\|Ga0074471_11196394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	3235	Open in IMG/M
3300005833\|Ga0074472_10403458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3011	Open in IMG/M
3300005833\|Ga0074472_11092590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1188	Open in IMG/M
3300006224\|Ga0079037_100168433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1937	Open in IMG/M
3300006224\|Ga0079037_102210989	Not Available	549	Open in IMG/M
3300006930\|Ga0079303_10020141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2137	Open in IMG/M
3300006930\|Ga0079303_10032064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1772	Open in IMG/M
3300006930\|Ga0079303_10094494	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300006930\|Ga0079303_10303004	Not Available	661	Open in IMG/M
3300006930\|Ga0079303_10400318	Not Available	581	Open in IMG/M
3300009009\|Ga0105105_10000229	All Organisms → cellular organisms → Bacteria → Proteobacteria	25939	Open in IMG/M
3300009009\|Ga0105105_10008621	All Organisms → cellular organisms → Bacteria	4049	Open in IMG/M
3300009009\|Ga0105105_10010102	All Organisms → cellular organisms → Bacteria	3773	Open in IMG/M
3300009009\|Ga0105105_10019671	All Organisms → cellular organisms → Bacteria → Proteobacteria	2820	Open in IMG/M
3300009009\|Ga0105105_10077440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300009037\|Ga0105093_10064920	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300009075\|Ga0105090_10176640	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300009081\|Ga0105098_10521242	Not Available	608	Open in IMG/M
3300009082\|Ga0105099_10340731	Not Available	885	Open in IMG/M
3300009085\|Ga0105103_10293241	Not Available	885	Open in IMG/M
3300009085\|Ga0105103_10775136	Not Available	555	Open in IMG/M
3300009111\|Ga0115026_10704753	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300009111\|Ga0115026_11703384	Not Available	531	Open in IMG/M
3300009131\|Ga0115027_10439066	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300009131\|Ga0115027_10564295	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300009131\|Ga0115027_10972516	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	662	Open in IMG/M
3300009131\|Ga0115027_11018501	Not Available	650	Open in IMG/M
3300009165\|Ga0105102_10275177	Not Available	864	Open in IMG/M
3300009165\|Ga0105102_10430590	Not Available	706	Open in IMG/M
3300009167\|Ga0113563_12001160	Not Available	692	Open in IMG/M
3300009167\|Ga0113563_12017974	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300009167\|Ga0113563_13928856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	503	Open in IMG/M
3300009168\|Ga0105104_10653876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	601	Open in IMG/M
3300009169\|Ga0105097_10051228	All Organisms → cellular organisms → Bacteria → Proteobacteria	2223	Open in IMG/M
3300009169\|Ga0105097_10646004	Not Available	597	Open in IMG/M
3300009430\|Ga0114938_1002665	All Organisms → cellular organisms → Bacteria	11065	Open in IMG/M
3300009455\|Ga0114939_10001224	All Organisms → cellular organisms → Bacteria → Proteobacteria	20496	Open in IMG/M
3300009659\|Ga0123328_1370675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	517	Open in IMG/M
3300010429\|Ga0116241_11341626	Not Available	536	Open in IMG/M
3300013232\|Ga0170573_11003647	Not Available	820	Open in IMG/M
3300014264\|Ga0075308_1037136	Not Available	916	Open in IMG/M
3300014264\|Ga0075308_1056290	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300019212\|Ga0180106_1060460	Not Available	763	Open in IMG/M
3300019212\|Ga0180106_1141195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1153	Open in IMG/M
3300019229\|Ga0180116_1159805	All Organisms → cellular organisms → Bacteria → Proteobacteria	2394	Open in IMG/M
3300019238\|Ga0180112_1325243	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300019244\|Ga0180111_1030850	Not Available	819	Open in IMG/M
3300019257\|Ga0180115_1215941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	910	Open in IMG/M
3300020065\|Ga0180113_1217275	Not Available	565	Open in IMG/M
3300021859\|Ga0210334_10998400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	830	Open in IMG/M
3300022171\|Ga0213857_1014500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300022171\|Ga0213857_1019602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300022171\|Ga0213857_1027112	Not Available	650	Open in IMG/M
3300022171\|Ga0213857_1035187	Not Available	597	Open in IMG/M
3300025106\|Ga0209398_1014230	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300025130\|Ga0209594_1076673	Not Available	1034	Open in IMG/M
3300025948\|Ga0210088_1006580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748	Open in IMG/M
3300026027\|Ga0208910_1001431	Not Available	1123	Open in IMG/M
3300026059\|Ga0208540_1003408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1569	Open in IMG/M
3300026059\|Ga0208540_1005370	Not Available	1309	Open in IMG/M
3300026064\|Ga0208146_1015366	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300026357\|Ga0256810_1002081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1733	Open in IMG/M
3300026357\|Ga0256810_1009292	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300026476\|Ga0256808_1020281	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300026477\|Ga0256807_1014223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1206	Open in IMG/M
3300026501\|Ga0256806_1011014	Not Available	1441	Open in IMG/M
3300027683\|Ga0209392_1245472	Not Available	535	Open in IMG/M
3300027693\|Ga0209704_1063795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1020	Open in IMG/M
3300027693\|Ga0209704_1078276	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300027715\|Ga0208665_10001592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4679	Open in IMG/M
3300027715\|Ga0208665_10019425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1787	Open in IMG/M
3300027715\|Ga0208665_10029257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1521	Open in IMG/M
3300027715\|Ga0208665_10132722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	776	Open in IMG/M
3300027743\|Ga0209593_10295712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	557	Open in IMG/M
3300027762\|Ga0209288_10238536	Not Available	599	Open in IMG/M
3300027841\|Ga0209262_10007932	All Organisms → cellular organisms → Bacteria → Proteobacteria	4296	Open in IMG/M
3300027841\|Ga0209262_10050056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1876	Open in IMG/M
3300027871\|Ga0209397_10148680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1039	Open in IMG/M
3300027871\|Ga0209397_10413360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	662	Open in IMG/M
3300027877\|Ga0209293_10044582	Not Available	1784	Open in IMG/M
3300027885\|Ga0209450_10003286	All Organisms → cellular organisms → Bacteria	8198	Open in IMG/M
3300027885\|Ga0209450_10049271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	2596	Open in IMG/M
3300027887\|Ga0208980_10140014	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300027890\|Ga0209496_10007513	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300027890\|Ga0209496_10672674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	564	Open in IMG/M
3300027897\|Ga0209254_10006401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10857	Open in IMG/M
3300027900\|Ga0209253_10017398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6105	Open in IMG/M
3300031834\|Ga0315290_10098038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2467	Open in IMG/M
3300032275\|Ga0315270_10334360	Not Available	956	Open in IMG/M
3300032397\|Ga0315287_10470043	Not Available	1493	Open in IMG/M
3300033408\|Ga0316605_10455200	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300033408\|Ga0316605_11175623	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300033413\|Ga0316603_10644710	Not Available	986	Open in IMG/M
3300033413\|Ga0316603_11511836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	636	Open in IMG/M
3300033413\|Ga0316603_11970380	Not Available	552	Open in IMG/M
3300033419\|Ga0316601_100217120	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300033419\|Ga0316601_101038893	Not Available	819	Open in IMG/M
3300033482\|Ga0316627_100064475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfomonile → Desulfomonile tiedjei	2318	Open in IMG/M
3300033482\|Ga0316627_100161368	Not Available	1667	Open in IMG/M
3300033482\|Ga0316627_100389083	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300033482\|Ga0316627_101548258	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300033482\|Ga0316627_102555481	Not Available	539	Open in IMG/M
3300033483\|Ga0316629_10495452	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300033483\|Ga0316629_10697211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	768	Open in IMG/M
3300033487\|Ga0316630_10318097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1207	Open in IMG/M
3300033487\|Ga0316630_10440068	Not Available	1052	Open in IMG/M
3300033488\|Ga0316621_10425677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	911	Open in IMG/M
3300033488\|Ga0316621_11337177	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300033493\|Ga0316631_10216564	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300033521\|Ga0316616_100194335	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300033521\|Ga0316616_100512424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300033521\|Ga0316616_100939456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1071	Open in IMG/M
3300033557\|Ga0316617_100282335	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300033557\|Ga0316617_102316834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300033557\|Ga0316617_102665144	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300034128\|Ga0370490_0021142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2181	Open in IMG/M
3300034169\|Ga0370480_0009328	Not Available	3466	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.90%
Engineered	Engineered	2.10%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	68.53%
Terrestrial	Environmental → Terrestrial	29.37%
Wastewater	Engineered → Wastewater	1.40%
Bioreactor	Engineered → Bioreactor	0.70%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	50.35%
Soil	Environmental → Terrestrial → Soil	23.08%
Marine	Environmental → Aquatic → Marine	14.69%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	6.29%
Sediment	Environmental → Aquatic → Sediment	3.50%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.70%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.70%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.70%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	30.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	13.99%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	6.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.99%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.20%
Pond	Environmental → Aquatic → Freshwater → Pond	3.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.80%
Lake	Environmental → Aquatic → Freshwater → Lake	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.70%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.70%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.70%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.70%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	30.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.08%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	11.19%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	6.29%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.20%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.50%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	3.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.70%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.70%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.70%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.70%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	14.69%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	11.19%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	7.69%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	6.29%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.20%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.20%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	3.50%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	3.50%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.50%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.10%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.40%
Sinkhole	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Sinkhole	0.70%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.70%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.70%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.70%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000316	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface Sediment Feb2011 Site B2 Cattail	Environmental	Open in IMG/M
3300000786	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A2 Cattail	Environmental	Open in IMG/M
3300000917	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A2 Cattail	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300005077	Water filled karst sinkhole microbial communities from Little Salt Spring, North Port, Florida - Phototrophic mat 2014	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300010429	AD_USRAca	Engineered	Open in IMG/M
3300013232	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1	Engineered	Open in IMG/M
3300014264	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rd	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019244	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022171	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025106	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)	Environmental	Open in IMG/M
3300025130	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)	Environmental	Open in IMG/M
3300025948	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026027	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026059	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026064	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026357	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU5	Environmental	Open in IMG/M
3300026476	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR6	Environmental	Open in IMG/M
3300026477	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR5	Environmental	Open in IMG/M
3300026501	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR4	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB2CaDRAFT_10204722	3300000316	Wetland	MKKNKEIELDCSKNCKSVVQACEAEGRSRSECENRYNQCVSNCTFA*
WSSedA2C2DRAFT_10052122	3300000786	Wetland	MKKDKEIELDCSKNCKSVVPACEAEGRSRSECENRYNQCVSNCTFA*
WSSedA2C3DRAFT_10446882	3300000917	Wetland	MKKDKEIELDCSKNCKSVVPACEAEGRNRDECENLYNQCISNCTFA*
JGIcombinedJ13530_1033543561	3300001213	Wetland	SLAQGIELTGGSEMKEDKDIELDCSKNCKSVVQACETEGRGRDECENRYNQCLSNCAFA*
JGI11641J44799_100366993	3300002961	Wetland	MKKDKEIELDCSKNCKSVVPACEAEGRNRDECENRYNQCISNCTFA*
JGI11641J44799_101429911	3300002961	Wetland	MKEDKELELDCSKNCKSVVSACEAEGRNRNECENSYNDCVSKCTFA*
JGI20214J51088_100704613	3300003432	Wetland	MKKAKKTELDCSKNCKSVIQRCETEGRSRDECENRHNQCVSNCTFA*
JGI20214J51088_101743002	3300003432	Wetland	MKEDKEIELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCAFA*
JGI20214J51088_102374352	3300003432	Wetland	MKKDKEIELDCSKNCKSVVPACEAEGRKRDECENRYNQCVSNCTFA*
JGI20214J51088_105719041	3300003432	Wetland	MKKDKEIELDCSKNCKFVVQACAAEGLSRDECENRHNQCVSNCAFA*
JGI20214J51088_106241693	3300003432	Wetland	MKKNKEIELDCSKNCKSVVQACEAEGRNRNECENRYNQCVSNCTFA*
JGI20214J51088_108874772	3300003432	Wetland	MKKDKEIELDCSKNCKSVVQACAAEGLSRDECENRHNQCVSNCAFA*
JGI20214J51088_109359951	3300003432	Wetland	KDIELDCSKNCKSVVQACETEGRGRDECENRYNQCLSNCAFA*
JGI20214J51650_1000102615	3300003541	Wetland	MKKAKNTELDCSKNCKSVIQGCEAEGRSRDECENRHNQCVSNCAFA*
JGI20214J51650_101041152	3300003541	Wetland	MKKDKEIELDCSKNCKSVVPACEAEGRNRDECENRYNQCVSNCTFA*
Ga0031656_101004583	3300003858	Freshwater Lake Sediment	MKEDKEIELDCSKNCKFATQTCEASGRSRDECENRYNDCVSRCTFA*
JGI26437J51864_100117242	3300003910	Freshwater Lake Sediment	MKEDKEIELDCSKNCKFVTQTCEASGRSRDECENRYNDCVSRCTFA*
Ga0055458_101829212	3300004000	Natural And Restored Wetlands	MKKDKNVELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA*
Ga0055436_103148091	3300004024	Natural And Restored Wetlands	MKEDKDIELDCSKNCKFAVEACEAEGRSRDECENRYNQCVSNCAFA*
Ga0066600_100281435	3300004155	Freshwater	MNKKDKKIELDCSKNCKSVVQACEAEGRSRGECENRHNQCVSNCAFA*
Ga0066600_102124021	3300004155	Freshwater	MKKNKNVELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA*
Ga0066599_1000244472	3300004282	Freshwater	MSFAKAGRNIMKKNKNVELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA*
Ga0071116_10062617	3300005077	Sinkhole	MKEGKEIELDCSKNCKFVAQTCEASGRSRDECENRYNDCVSRCTFA*
Ga0068999_100252852	3300005205	Natural And Restored Wetlands	MKEDKEIELDCSKNCKFVTETCEASGRSRDECENRYNDCVSRCTFA*
Ga0074478_11316522	3300005827	Sediment (Intertidal)	MKKDKEIELDCSKNCKSVVQACEAEGRNRDECENRYNQCVSNCTFA*
Ga0074473_102439431	3300005830	Sediment (Intertidal)	MKKDKNVALDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA*
Ga0074471_111963942	3300005831	Sediment (Intertidal)	MKKNKQIKLDCSKNCKSVVQACEAEGRSRDECENRHNQCVSNCTFA*
Ga0074472_104034584	3300005833	Sediment (Intertidal)	MKEDKEIELDCSKNCKYVVQTCEASGRDRDECENRYNDCVSKCSFA*
Ga0074472_110925903	3300005833	Sediment (Intertidal)	YKMKEDKEIELDCSKNCNFVTETCEASGRSRDECENRYNDCVSRCTFA*
Ga0079037_1001684332	3300006224	Freshwater Wetlands	MKEDKELELDCSKNCKSVVSACEAEGRGRDECENRYNDCVSKCAFA*
Ga0079037_1022109892	3300006224	Freshwater Wetlands	MKEDKEIELDCSKNCKFVTETCEASGRDRDECENRYNDCVSKCAFA*
Ga0079303_100201414	3300006930	Deep Subsurface	MKKKDKKIDLDCSKNCKSVVQACEAEGRSRGECENRHNQCVSNCAFA*
Ga0079303_100320642	3300006930	Deep Subsurface	MKEDKELELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA*
Ga0079303_100944942	3300006930	Deep Subsurface	MKEDKEIELDCSKNCKSVTETCEASGRGRDECENRYNDCVSKCAFA*
Ga0079303_103030042	3300006930	Deep Subsurface	MKEDKEFELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA*
Ga0079303_104003182	3300006930	Deep Subsurface	MKEDKEIELDCSKNCKFVTQTCEASGRDRDECENRYNDCVSKCAFA*
Ga0105105_1000022917	3300009009	Freshwater Sediment	MKEDKEIELDCSKNCKFVTQTCEASGRSREECENRYNDCVSRCTFA*
Ga0105105_100086212	3300009009	Freshwater Sediment	MKKNKEIELDCSKNCKSVVQTCEASGRGRDECENRYNDCVSRCTFA*
Ga0105105_100101022	3300009009	Freshwater Sediment	MKKDKEIELDCSKNCKSVVPACEAEGRDRDECENRYNQCVSNCTFA*
Ga0105105_100196714	3300009009	Freshwater Sediment	MKEEKKKELDCSKNCKFVVQACEGEGRSRSECENRYNQCISNCTFA*
Ga0105105_100774403	3300009009	Freshwater Sediment	MKEDKEIELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA*
Ga0105093_100649203	3300009037	Freshwater Sediment	MKEDKEIELDCSKNCKSVAQTCEASGRSRDECENRYNDCVSRCTFA*
Ga0105090_101766402	3300009075	Freshwater Sediment	MKKNKEIELDCSKNCKSVVQTCEASGRGRDECENRYNDCVSKCTFA*
Ga0105098_105212421	3300009081	Freshwater Sediment	MKEDKEFKLDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA*
Ga0105099_103407312	3300009082	Freshwater Sediment	MKKDKEIELDCSKNCKSVVPACEAEGRDRDECENRY
Ga0105103_102932412	3300009085	Freshwater Sediment	MKEEKKKELDCSKNCKFVVQACEGEGRSRSECENRYNQCISNCAFA*
Ga0105103_107751362	3300009085	Freshwater Sediment	MKDDKSIELDCSKNCKSTVTACEAEGRGRDECENRYNDCVSKCAFA*
Ga0115026_107047531	3300009111	Wetland	QEENTMKEDKELELDCSKNCKSVVSACEAEGRGRDECENRYNDCVSKCAFA*
Ga0115026_117033841	3300009111	Wetland	MKEEKKKELDCSKNCKFVVQACEGEGRSRSECENRYNQCISNCTFT*
Ga0115027_104390663	3300009131	Wetland	MKEDKDIELDCSKNCKSTVSACEAEGRGRNECENRYNDCASKCAFA*
Ga0115027_105642952	3300009131	Wetland	MKEDKDTELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA*
Ga0115027_109725162	3300009131	Wetland	MKKDKNVELDCSKNCKSVVRTCEAEGRSRGECENRYNQCVSNCTFA*
Ga0115027_110185011	3300009131	Wetland	MKEDKEIELNCSKNCKFVVQACESEGRSRDECENRYNQCVSNCTFA*
Ga0105102_102751772	3300009165	Freshwater Sediment	KNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA*
Ga0105102_104305901	3300009165	Freshwater Sediment	IELDCSKNCKSVVQTCEASGRGRDECENRYNDCVSRCTFA*
Ga0113563_120011602	3300009167	Freshwater Wetlands	MKEDKEIELDCSKNCKFVVSACEAAARSRDECENRYNDCVSRCTFA*
Ga0113563_120179741	3300009167	Freshwater Wetlands	EIELDCSKNCKFVTQACEASGRGHDECENRYNDCVSRCTFA*
Ga0113563_139288561	3300009167	Freshwater Wetlands	MKKDKEIELDCSKNCKSVVQACEAEGRSRSECENRYNQCVSNCTFA*
Ga0105104_106538762	3300009168	Freshwater Sediment	MKEEKKKELDCSKNCKSVVQTCEASGRGRDECENRYNDCVSRCTFA*
Ga0105097_100512283	3300009169	Freshwater Sediment	MKEDMKAELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA*
Ga0105097_106460042	3300009169	Freshwater Sediment	CSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA*
Ga0114938_10026657	3300009430	Groundwater	MKEDREIELDCSKNCKFVVQTCEASGGEREECENRYNDCVSRCAFA*
Ga0114939_1000122415	3300009455	Groundwater	MKEDREIELDCSKKCKFVVQTCEASGGERKECENRYNDCVSKCAFA*
Ga0123328_13706751	3300009659	Anaerobic Biogas Reactor	MKEDKEVELDCSKNCKSVIETCEAGGRGRNECENRYNDCLSKCTVA*
Ga0116241_113416262	3300010429	Anaerobic Digestor Sludge	MKEDKEVELDCSKNCKSMIETCEAGGRGRNECENRYNDCVSKCTFA*
Ga0170573_110036472	3300013232	Sediment	MKKNKQIELDCSKNCKSVQACEAKGRSRDECENRYNQCVSSCTFA*
Ga0075308_10371361	3300014264	Natural And Restored Wetlands	MKKDKNVELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAF
Ga0075308_10562901	3300014264	Natural And Restored Wetlands	KNVELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA*
Ga0180106_10604601	3300019212	Groundwater Sediment	MKEDKEIELDCSKNCKFVVQACEAEGRSRDECENRHNQCVSSCTFA
Ga0180106_11411952	3300019212	Groundwater Sediment	MKKDKEIELDCSKNCKSVVQACEAEGRNRGECENRYNQCVSNCTFA
Ga0180116_11598053	3300019229	Groundwater Sediment	MKEDKEIELNCSKNCKFVVQACEAEGRSRDECENRFNQCVSSCAFA
Ga0180112_13252433	3300019238	Groundwater Sediment	MKEDKEIELNCSKNCKSVVQGCEAEGRSRDECENRYNQCVSNCTFA
Ga0180111_10308502	3300019244	Groundwater Sediment	MKKDKEIELDCSKNCKSVVQTCEAEGRSRDECENRYNQCVSSCAFA
Ga0180115_12159413	3300019257	Groundwater Sediment	MKKDKEIELDCSKNCKSVVQTCEAEGRSRDECENR
Ga0180113_12172752	3300020065	Groundwater Sediment	MKKDKEIELDCSKNCKSVVQTCEAEGRSRGECENRYNQCVSSCAFA
Ga0210334_109984002	3300021859	Estuarine	MKKNKQIKLDCSKNCKSVVQACEAEGRSRDECENRHNQCVSNCTFA
Ga0213857_10145003	3300022171	Watersheds	MKEDKEIELDCSKNCKSVVQTCEAEGRSRDECENRYNQCVSSCAFA
Ga0213857_10196022	3300022171	Watersheds	MKEDKEIELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA
Ga0213857_10271121	3300022171	Watersheds	MKKDKEIELDCSKNCKSVVQACEAEGRSRDECENRYNRCVSNCTFA
Ga0213857_10351871	3300022171	Watersheds	MKEDKEIELDCSKNCKFVVQACEAEGRSRDECENRFNQCVSSCAFA
Ga0209398_10142303	3300025106	Groundwater	MKEDREIELDCSKNCKFVVQTCEASGGEREECENRYNDCVSRCAFA
Ga0209594_10766732	3300025130	Groundwater	MKEDREIELDCSKKCKFVVQTCEASGGERKECENRYNDCVSKCAFA
Ga0210088_10065802	3300025948	Natural And Restored Wetlands	MKKDKNVELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA
Ga0208910_10014312	3300026027	Natural And Restored Wetlands	MKKNKQIELDCSKNCKSVQACEAKGRSRDECENRYNDCVSR
Ga0208540_10034081	3300026059	Natural And Restored Wetlands	SVSRETGRVIMKKDKNVELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA
Ga0208540_10053702	3300026059	Natural And Restored Wetlands	MKKDKNVELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVS
Ga0208146_10153662	3300026064	Natural And Restored Wetlands	ELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA
Ga0256810_10020812	3300026357	Sediment	MKKDKEIELDCSKNCKSVAPECEAEGRSRDECENRYNQCVSNCTFA
Ga0256810_10092922	3300026357	Sediment	MKKNKQIELDCSKNCKSVQACEAKGRSRDECENRYNQCVSNCTFA
Ga0256808_10202812	3300026476	Sediment	MKEEKKIELDCSKNCKFVVQACEVEGRSRHECENRYNRCVSNCAFA
Ga0256807_10142232	3300026477	Sediment	MKEGKKIELDCSKNCKFVVQACEVEGRSRHECENRYNRCVSNCAFA
Ga0256806_10110142	3300026501	Sediment	MKKDKNVALDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA
Ga0209392_12454722	3300027683	Freshwater Sediment	MKEDKEIELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCT
Ga0209704_10637952	3300027693	Freshwater Sediment	MKKDKEIELDCSKNCKSVVPACEAEGRDRDECENRYNQCVSNCTFA
Ga0209704_10782761	3300027693	Freshwater Sediment	MKKNKEIELDCSKNCKSVVQTCEASGRGRDECENRYNDCVSRCTFA
Ga0208665_100015924	3300027715	Deep Subsurface	MKEDKELELDCSKNCKSVVSACEAEGRGRDECENRYNDCVSKCAFA
Ga0208665_100194251	3300027715	Deep Subsurface	MKEDKEIELDCSKNCKSVTETCEASGRGRDECENRYNDCVSKCAFA
Ga0208665_100292572	3300027715	Deep Subsurface	MKKKDKKIDLDCSKNCKSVVQACEAEGRSRGECENRHNQCVSNCAFA
Ga0208665_101327222	3300027715	Deep Subsurface	MKKDKEIELDCSKNCKSVVPACETEGRNRDECENRYNQCVSNCTFA
Ga0209593_102957122	3300027743	Freshwater Sediment	MKKDKEIELDCSKNCKSVVPACEAEGRDRDECENRYNQCVSN
Ga0209288_102385362	3300027762	Freshwater Sediment	EIELDCSKNCKSVVQTCEASGRGRDECENRYNDCVSRCTFA
Ga0209262_100079323	3300027841	Freshwater	MKKNKNVELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA
Ga0209262_100500561	3300027841	Freshwater	MNKKDKKIELDCSKNCKSVVQACEAEGRSRGECENRHNQCVSNCAFA
Ga0209397_101486802	3300027871	Wetland	MKEDKDTELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA
Ga0209397_104133602	3300027871	Wetland	MKKDKNVELDCSKNCKSVVRTCEAEGRSRGECENRYNQCVSNCTFA
Ga0209293_100445822	3300027877	Wetland	MKEDKELELDCSKNCKSVVSACEAEGRGRDECENRYNDCVSK
Ga0209450_100032868	3300027885	Freshwater Lake Sediment	MKEDKELELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA
Ga0209450_100492712	3300027885	Freshwater Lake Sediment	MKKNKEIELDCSKNCKSVAQTCEASSRSRDECENRYNDCVSKCTFA
Ga0208980_101400141	3300027887	Wetland	MKENKEIELDCSKNCKSVVSACEAESRSRDECENRNNDCVSRCTFA
Ga0209496_100075133	3300027890	Wetland	MKEDKEIELDCSKNCKFVTQTCEASGRDRDECENRYNDCVSKCAFA
Ga0209496_106726742	3300027890	Wetland	MKKDKNVELDCSKNCKSVVRTCEAEGRSRGECENRYNQCVSNC
Ga0209254_1000640111	3300027897	Freshwater Lake Sediment	MKEDKEIELDCSKNCKFATQTCEASGRSRDECENRYNDCVSRCTFA
Ga0209253_100173989	3300027900	Freshwater Lake Sediment	LSKEEEEGVGFWKTGRAIMKEDKDTELDCSKNCKFVVSACEAEGRNRNECENRYNDCVSKCTFA
Ga0315290_100980382	3300031834	Sediment	MKEDKDIELDCSKNCKFVVEACEAEGRSRDECENRYNQCVSNCAFA
Ga0315270_103343601	3300032275	Sediment	MKKDKEIELDCSKNCKSVVQACEAEGRSRDECENRYNQCVSNCTFA
Ga0315287_104700432	3300032397	Sediment	MKKDKEIELDCSKNCKSVVQACEAEGRNRDECENRYNQCVSNCTFA
Ga0316605_104552003	3300033408	Soil	MKEDKEFELDCSKNCKSVVQGCEAEGRSRDECENRYNQCVSNCTFA
Ga0316605_111756232	3300033408	Soil	MKEEKKKELDCSKNCKFVVQACEGEGRSRSECENRYNQCISNCTFA
Ga0316603_106447102	3300033413	Soil	MKKDKEIELDCSKNCKSVVQACEAEGRSRSECENRYNQCVSNCTFA
Ga0316603_115118361	3300033413	Soil	KEIELDCSKNCKFVTQTCEASGRDRDECENRYNDCVSKCAFA
Ga0316603_119703802	3300033413	Soil	MKEDKEIELDCSKNCKSVAQTCEASGRSRDECENRYNDCVSRCTFA
Ga0316601_1002171203	3300033419	Soil	MKDDKSIELDCSKNCRSTVSACEAEGRGSDECENRYNDCVSKCTFA
Ga0316601_1010388931	3300033419	Soil	MKKDKEIELDCSKNCKSVVPACEAEGRNRDECENRYNQCVSNCTF
Ga0316627_1000644753	3300033482	Soil	STWIEKKEEEVAFRKAGRAIMKEDKELELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA
Ga0316627_1001613682	3300033482	Soil	MKEDKEFELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA
Ga0316627_1003890833	3300033482	Soil	MKEDKDIELDCSKNCKSTVSACETEGRGRDECENRYNDCVSKCAFA
Ga0316627_1015482581	3300033482	Soil	DIELDCSKNCKSTVSACEAEGRGRNECENRYNDCASKCAFA
Ga0316627_1025554811	3300033482	Soil	MKKDKEIELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTF
Ga0316629_104954523	3300033483	Soil	MKEDKEIELDCSKNCKFVVPACEAEGRSRDECENRYNQCVSNCTFA
Ga0316629_106972112	3300033483	Soil	MKKDKEIELDCSKNCKSVVPACEAEGRNRDECENRYNQCVSNCTFA
Ga0316630_103180972	3300033487	Soil	AFRKIGRAIMKEDKDTELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTFA
Ga0316630_104400681	3300033487	Soil	MKEEKKKELDCSKNCKFVVQACEGEGPSRSECENRYNQCISNCTFA
Ga0316621_104256772	3300033488	Soil	MKKKDKKIDLDCSKNCKSVVQACEAEGRSRGECENRHNQCVANCAFA
Ga0316621_113371772	3300033488	Soil	TGGYKMKEDKEIELDCSKNCKFVTQACEASGRGHDECENRYNDCVSRCTFA
Ga0316631_102165641	3300033493	Soil	MKEDKEIELDCSKNCKFVTQTCEASGRSRDECENRYNDCVSRCTF
Ga0316616_1001943353	3300033521	Soil	VVMKKDKNVELDCSKNCKSVVRTCEAEGRSRGECENRYNQCVSNCTFA
Ga0316616_1005124243	3300033521	Soil	MKEDKDIELDCSKNCKSTVSACEAEGRGRNECENRYNDCASKCAFA
Ga0316616_1009394561	3300033521	Soil	EDKEIELDCSKNCKFVTQTCEASGRDRDECENRYNDCVSKCAFA
Ga0316617_1002823353	3300033557	Soil	MKEDKEFELDCSKNCKFVVPACEAEGRSRDECENRYNQCVSNCTFA
Ga0316617_1023168342	3300033557	Soil	KKEEEVAFRKAGRAIMKEDKELELDCSKNCKSVVSACEAEGRNRNECENRYNDCVSKCTF
Ga0316617_1026651442	3300033557	Soil	MKDDKSIELDCSKNCKSTVSACEAEGRGRKECENRYNDCVSKCAFA
Ga0370490_0021142_161_301	3300034128	Untreated Peat Soil	MKEDMKAELDCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA
Ga0370480_0009328_2_115	3300034169	Untreated Peat Soil	DCSKNCKFVVQACEAEGRSRDECENRYNQCVSNCTFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052021

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences