Sample 3300025948

Overview

Basic Information
IMG/M Taxon OID	3300025948 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0111376 \| Gp0101369 \| Ga0210088
Sample Name	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	145908470
Sequencing Scaffolds	61
Novel Protein Genes	64
Associated Families	62

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	3
All Organisms → cellular organisms → Bacteria → Proteobacteria	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas	1
Not Available	16
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → unclassified Halobacteria → Halobacteria archaeon	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Formivibrio → Formivibrio citricus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands → Natural And Restored Wetland Microbial Communities From The San Francisco Bay, California, Usa, That Impact Long-Term Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: San Francisco Bay, California
Coordinates	Lat. (^o)	38.209923	Long. (^o)	-122.033409	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000769	Metagenome / Metatranscriptome	898	Y
F000982	Metagenome / Metatranscriptome	814	Y
F004285	Metagenome / Metatranscriptome	445	Y
F004798	Metagenome / Metatranscriptome	423	Y
F006082	Metagenome / Metatranscriptome	382	Y
F006122	Metagenome / Metatranscriptome	381	Y
F007558	Metagenome / Metatranscriptome	349	Y
F008056	Metagenome / Metatranscriptome	340	Y
F008255	Metagenome / Metatranscriptome	336	Y
F013428	Metagenome / Metatranscriptome	271	Y
F016687	Metagenome / Metatranscriptome	245	Y
F018997	Metagenome / Metatranscriptome	232	Y
F019989	Metagenome / Metatranscriptome	226	Y
F020200	Metagenome	225	Y
F021563	Metagenome / Metatranscriptome	218	Y
F023894	Metagenome / Metatranscriptome	208	Y
F026259	Metagenome	198	N
F029006	Metagenome	189	Y
F030143	Metagenome / Metatranscriptome	186	Y
F031548	Metagenome / Metatranscriptome	182	Y
F034001	Metagenome / Metatranscriptome	176	Y
F034003	Metagenome	176	Y
F036767	Metagenome / Metatranscriptome	169	Y
F037275	Metagenome	168	Y
F041848	Metagenome / Metatranscriptome	159	N
F042655	Metagenome	158	Y
F046145	Metagenome	151	Y
F051083	Metagenome	144	Y
F051238	Metagenome	144	Y
F052021	Metagenome / Metatranscriptome	143	Y
F053088	Metagenome / Metatranscriptome	141	N
F053932	Metagenome / Metatranscriptome	140	Y
F054877	Metagenome / Metatranscriptome	139	Y
F054979	Metagenome / Metatranscriptome	139	Y
F055103	Metagenome / Metatranscriptome	139	Y
F056185	Metagenome	138	Y
F056580	Metagenome	137	N
F068995	Metagenome	124	Y
F068997	Metagenome / Metatranscriptome	124	Y
F069001	Metagenome / Metatranscriptome	124	Y
F069003	Metagenome	124	Y
F069004	Metagenome / Metatranscriptome	124	N
F069741	Metagenome / Metatranscriptome	123	Y
F073725	Metagenome / Metatranscriptome	120	N
F073726	Metagenome	120	Y
F074182	Metagenome	120	Y
F074466	Metagenome	119	Y
F076231	Metagenome	118	Y
F076808	Metagenome / Metatranscriptome	117	Y
F078289	Metagenome / Metatranscriptome	116	N
F078730	Metagenome / Metatranscriptome	116	Y
F081923	Metagenome / Metatranscriptome	114	N
F087857	Metagenome / Metatranscriptome	110	N
F088148	Metagenome / Metatranscriptome	109	Y
F091055	Metagenome / Metatranscriptome	108	N
F094061	Metagenome	106	Y
F097618	Metagenome / Metatranscriptome	104	N
F101126	Metagenome / Metatranscriptome	102	Y
F101438	Metagenome / Metatranscriptome	102	N
F102135	Metagenome / Metatranscriptome	102	Y
F102138	Metagenome	102	Y
F104864	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0210088_1000048	All Organisms → cellular organisms → Bacteria	25692	Open in IMG/M
Ga0210088_1000182	All Organisms → cellular organisms → Bacteria	12399	Open in IMG/M
Ga0210088_1000447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	7879	Open in IMG/M
Ga0210088_1000499	All Organisms → cellular organisms → Bacteria	7411	Open in IMG/M
Ga0210088_1000550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	7021	Open in IMG/M
Ga0210088_1000891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	5267	Open in IMG/M
Ga0210088_1000924	All Organisms → cellular organisms → Bacteria → Proteobacteria	5179	Open in IMG/M
Ga0210088_1001040	All Organisms → cellular organisms → Bacteria → Proteobacteria	4804	Open in IMG/M
Ga0210088_1001114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4591	Open in IMG/M
Ga0210088_1001288	All Organisms → cellular organisms → Bacteria → Proteobacteria	4221	Open in IMG/M
Ga0210088_1001642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas	3683	Open in IMG/M
Ga0210088_1001805	Not Available	3495	Open in IMG/M
Ga0210088_1002128	All Organisms → cellular organisms → Bacteria → Proteobacteria	3181	Open in IMG/M
Ga0210088_1002237	All Organisms → cellular organisms → Bacteria → Proteobacteria	3086	Open in IMG/M
Ga0210088_1002815	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	2700	Open in IMG/M
Ga0210088_1005062	Not Available	1993	Open in IMG/M
Ga0210088_1005685	Not Available	1880	Open in IMG/M
Ga0210088_1006082	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	1822	Open in IMG/M
Ga0210088_1006314	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
Ga0210088_1006580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748	Open in IMG/M
Ga0210088_1006632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1740	Open in IMG/M
Ga0210088_1008958	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499	Open in IMG/M
Ga0210088_1009178	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → unclassified Halobacteria → Halobacteria archaeon	1482	Open in IMG/M
Ga0210088_1010884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1359	Open in IMG/M
Ga0210088_1011924	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	1298	Open in IMG/M
Ga0210088_1014668	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
Ga0210088_1015582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1137	Open in IMG/M
Ga0210088_1017053	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
Ga0210088_1018022	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1060	Open in IMG/M
Ga0210088_1019652	Not Available	1017	Open in IMG/M
Ga0210088_1022832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	947	Open in IMG/M
Ga0210088_1023790	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	929	Open in IMG/M
Ga0210088_1030227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	828	Open in IMG/M
Ga0210088_1031424	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	813	Open in IMG/M
Ga0210088_1034378	Not Available	780	Open in IMG/M
Ga0210088_1037254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	751	Open in IMG/M
Ga0210088_1037806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Formivibrio → Formivibrio citricus	747	Open in IMG/M
Ga0210088_1038220	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
Ga0210088_1038562	Not Available	740	Open in IMG/M
Ga0210088_1042622	Not Available	707	Open in IMG/M
Ga0210088_1044344	Not Available	694	Open in IMG/M
Ga0210088_1046825	Not Available	677	Open in IMG/M
Ga0210088_1049139	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
Ga0210088_1052331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	644	Open in IMG/M
Ga0210088_1052359	Not Available	644	Open in IMG/M
Ga0210088_1053041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	640	Open in IMG/M
Ga0210088_1055064	Not Available	629	Open in IMG/M
Ga0210088_1059040	Not Available	609	Open in IMG/M
Ga0210088_1059377	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	607	Open in IMG/M
Ga0210088_1060203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	603	Open in IMG/M
Ga0210088_1063793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	588	Open in IMG/M
Ga0210088_1066386	Not Available	577	Open in IMG/M
Ga0210088_1068311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	569	Open in IMG/M
Ga0210088_1070134	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
Ga0210088_1071699	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
Ga0210088_1072084	Not Available	555	Open in IMG/M
Ga0210088_1072841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	553	Open in IMG/M
Ga0210088_1073963	Not Available	549	Open in IMG/M
Ga0210088_1075754	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
Ga0210088_1078164	Not Available	535	Open in IMG/M
Ga0210088_1082757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	521	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0210088_1000048	Ga0210088_10000485	F081923	MIVNISAAIRPVMYRKHFFVMAILGAALAVACTMANTGSIQTSAEVTRQFEGLQVNPNYRYWYLNQENNPFGVIGLDREYGFAGGPVWRAVESDSPIFRKVVGLVESFPVASSLTTGYTIFEQQGRPIGVWYSSIGLGVTIDPATKTVSPATTTPWKSPF
Ga0210088_1000182	Ga0210088_10001829	F068995	MKAEKKIKYVKAIHPSQPEWEYYLPKEDKALIKKLSKKPIFPKLCERPCTSIITLFPKDTIQGNTGKGYHMINIDGYRMINAYVISDALNSTNQRGFTLELSFALNDFVYGVGVVGETSYFFNFDSYFDAGTLSHKLQRCETNDLTTTGGLPMLGGVDLTHILRVPVMGPYVRASVFNEDGTARKAEVKAYLST
Ga0210088_1000447	Ga0210088_10004472	F007558	MQTIAEIKMLLLEILESAFQSGDVNATQQMGVNMTNAVKREGVVIIQNQNVEVYARIMPLMVKTLKLCDAVESSWRGQATIELEPQQKQLPPPADDDDPDPIEACCSWLYDNHIQWQDMQDLMKARYLEYVIGRFKTKTEAAKWLGVGSTYLCKLSKTTLYAVSQN
Ga0210088_1000499	Ga0210088_10004998	F054979	MQNLLELSAKKFGVPSEVLDLIGRQFISQIIDEFPTLLLPPIMNTLKQEYVENGMEWIKQNVMSLREQFLLLKKLYGPSWILA
Ga0210088_1000550	Ga0210088_10005501	F031548	MKTNIMKIFAIAALMIFVGAGVSMAGGWKEYGGKRGNAYGHYKGRQYNHYEYCTPRPVYVEHHYRPIVVERRVYHPPVVYQAPAPSGYFLGMSVVEQGMAFSFGMSGH
Ga0210088_1000891	Ga0210088_10008914	F073725	MEKRAARRHRINSSIVCSHLNSVGFGEPVGGRMKNCCVNGLYAELQSRFKTGTVLVVRSTGSSCGFSGDEGFRSLAVAEVKWTESKSVEGGICYATGLKYLMI
Ga0210088_1000924	Ga0210088_10009246	F016687	MKTLKFFAGLMTISVIALCAGSASAWDTRWQFKQEAPSNSYGSGTRDIEMQKRFDYNSMNKFKGTIETSSGYTIMRNLNGDTMRGYIDKDGSGLLRDQNGNFHNVNTRW
Ga0210088_1001040	Ga0210088_10010401	F087857	MKRNFIVVPLLVIAFVAIQIVPPAHAEPITLTIMAIAGITTVMTAACTDMAVHGEHIVQANSPNEKPAEVFVSERSADSSN
Ga0210088_1001114	Ga0210088_10011144	F023894	MEHGNHGNGNIGWVFGILVIAGALMLLACDQPSGQSDLSKKAPPSLGAIANVDGSDDEKKDGKKAQAGSEQAPAQSPAGGQPAQAAPKQ
Ga0210088_1001288	Ga0210088_10012884	F069003	MMPRVELWTTVFAGLSGGLAGVLWSSLVTTPWLARGGSVGVDDRTESATRVFAGAALRAAAGAALGFLFWLGWGLIALVGFPWYVVGPLYGVVTWAALAAPALGTLLLRSHGPAKPVLAHTVEWLATCLAIGLMCAWAWDRYA
Ga0210088_1001642	Ga0210088_10016427	F053088	MDQPIEYFLTQAKRISGASPTTKIHGVLFNVTIGVVAAGTVYGHKSARNGSDIRTSLIVDAYVINGFYIIGTRTSSNYLLARVGPSRIFRDQWGILQEHLGKNHKALAGLPKSDFSTFGPGFMHATCPAQIKDFDRLRREAA
Ga0210088_1001805	Ga0210088_10018051	F000769	GRLHRYGFYWRFCKPTGAERFRVQRFLCGSCGHTVSVLPGTRLTYRPLEVGRLEGFFDTQAGIRTGLDPPPGLVEAGCLQRAWNRLLTRVPILKHAFGQLLPSKLHTAQQLWKALRRGMGSAEEMLRFLARSCKRSLLGDYTCLRPAP
Ga0210088_1002128	Ga0210088_10021283	F004285	MNLSWITDRGLRISPRARLVADGDAEALRRKLEQISWRPENGFLKDQVTERAPQPAARSARAA
Ga0210088_1002237	Ga0210088_10022373	F101438	MLRQIFSACLFVWCSTSAWADGPVDIPVSSAARFEQILDFRNNASLVRQPQQALDLADAMTDPEFLVAAMMMSANPEVWLKALERAGAPGVPKNLSQMATPEMLADWFYSSIDPQFQQAIVTRMLDPKKPQRWMQAMSNPRFYMHALAVMNPATPMQWMKVTADGRMIQPMQAWFNPKTYLNWMRVPMPSPTAAQKNGNKTPLAVNSLKPPQRY
Ga0210088_1002815	Ga0210088_10028152	F020200	MCWVCERLEHLITSWNEEQEFKEQTSSDDYHRGLSKGFSECVKDLSEAVASMRLKGICEKFPEYERVLNDKQRLDILEDLLKLRDEDTNQE
Ga0210088_1002815	Ga0210088_10028154	F021563	MEDLKLLLIDRLKSQGMDPSLIPSFLKALTSIISSEPGIEPARANLKLNSLGWNEVAIDYHCLQIAIACLDADTKDQRDMIIQTRILKGADPA
Ga0210088_1005062	Ga0210088_10050623	F097618	MGEEKLEKRFEEAEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0210088_1005685	Ga0210088_10056853	F046145	VCLNFYWKLFEWITARYEKTISDELECDHMALIPKSFLKAKTDFFIMSRYLRVLSEKI
Ga0210088_1006082	Ga0210088_10060821	F076231	MMHPKPNKGGTADISEFSGFISSKQSSSIMSLTKIVVAISVLLAVLMVVSR
Ga0210088_1006314	Ga0210088_10063143	F074182	MAITTGQEEIQVGKGTCLISWSKMGREEIFCALGTLMDLIEYGDKYKAMPKFADPAFKREFESIMKSF
Ga0210088_1006580	Ga0210088_10065802	F052021	MKKDKNVELDCSKNCKSVVQTCEAEGRNRGECENRHNQCVSNCAFA
Ga0210088_1006632	Ga0210088_10066323	F046145	MLQVCLNFYWKLFEWITDRYEKTIPDLLECDHMALKPKPFSEAKTGFFIMSRYLRVLSEK
Ga0210088_1008958	Ga0210088_10089582	F102135	MCWTGLIVGIFLGAGIGIVVAGILFAVKRREAEDHSSETPIDHALMDEGEEVPDELPPLPKSETYFDRYPHS
Ga0210088_1009178	Ga0210088_10091782	F069741	MENIFFDVDQLSSLDKIEQARRLEEAERRIDEVQRAAADDPDSMNWVDQQRQYLVDMQHLIFEC
Ga0210088_1010884	Ga0210088_10108842	F000982	MPSFKSTSRTDRLLLHYQIRGKAYPEQRYWERLSQMLDEEAEKRGKTPPPPPLTHGLERDPTDEDKTERLREQIAWADRNQLLHRVQMFFEAMPPSGWVRGEKR
Ga0210088_1011924	Ga0210088_10119241	F069001	MKVIFGGRKNEELISKRRGSDKQQRFCEVCGTFVGALTSKEWDLEGRICKTCVEAYASSLEIEMDAANQSWKVKRHSWELDSERCRISRFV
Ga0210088_1014668	Ga0210088_10146681	F078730	MDYTNIIQPKRLTNMQEMVVHVNGPDGANRLFMYSGMAEVELCGGMPHPRWSLE
Ga0210088_1015582	Ga0210088_10155822	F056185	MRPRMLLLFRLLMVLVSLFIVADCSGPQAKIRKVDLPKEKELRANWKNYNTYCLGSRGGNVDFADAMLFQLKSDKTIQRDDDWREVTSDQMASGCASLLSDSSPVMQLLGENDEIFGYVIYNFNDQIWASIIDPKTIRLFYHVHPKGP
Ga0210088_1017053	Ga0210088_10170531	F094061	MGESENDVEVGGREEFGLTFFNPSFSGDVLTLGAVSIAAGMVEDTFCAAVGAALDVASQDGGAAVKEVGNDLMLIWG
Ga0210088_1018022	Ga0210088_10180222	F091055	MVKVVFQYNVAKEKQAEYLQITRDKIKPFWEANGCQSYTVWQVGETETGFVKEMLFESMPGMKETMALKQADPVKELYFKFATDVSRKVIAKKV
Ga0210088_1019652	Ga0210088_10196522	F013428	MDSQQTEEQRRRIRRTTIVLALVALAIYVAFIASGVMKAQP
Ga0210088_1022832	Ga0210088_10228321	F069004	MKEPREVGVAIHDRFFTLDVGIDDEELIISLLAGLALYVRKGNSIKVRQSYVTFSGSQEIITKFISKTEQVGEWSKETKQILSALKKKR
Ga0210088_1023790	Ga0210088_10237902	F056580	VATYSVTHKQVVSNVAIVQLLEPHNFEVGQSITISGINATWNGTHKILALPEYYFIGVSQQGDYQYDTDTIIPNQVQFALTTADADRAAASGTVTYSITCSWIVLGDLEDYLGYTFTNPSADLDVANMAVSAANQFAYRKRQES
Ga0210088_1030227	Ga0210088_10302272	F076808	MLLAFPENFSENGARPVQILGRHGRLIGWARSFSDTMTVTDNTIVGGRPQGRLTRIAGRDVSGPDGHTVGKTFSRKELLECPWKPSPARSAESASNHIPAPSQDRPQSVDPAGPLMHKSSYPQNGARETGLGHWLPGFLRSNQSFTPIDSLPPAVSSLLPAMPKEK
Ga0210088_1031424	Ga0210088_10314241	F088148	TIKANCRQLTQSNGAEFLLFLKANQPTALAKAEQLLPGALPPSGQHAGQGPRTH
Ga0210088_1032818	Ga0210088_10328182	F102138	GEYLSDKLYGLDYKVTILNDERNKIIVFTHDSFTGRSALEKFHNTVANDLRALGFKQIRYKWYELEKLKEEKYIHYNFKDLPDNEPRRFNISVIKN
Ga0210088_1034378	Ga0210088_10343782	F026259	QNSPEILLDKIVDMIESSQGAPFLLNFDERSMAGMMLQRNVEARGAYTDGNRSREVQIAHKKLGAQAEIAVCNYLGAIWSGMPMPSDHNRDSYDVEDWIEVRMAANRGGLRFWNRDLPRFEDDYRGKKYHDDTPFVLCHPGQMLHHVKIVGWIWAAYALELWEYERYYDTDSYVVPIKELYSPASLKETFNDYKENR
Ga0210088_1037254	Ga0210088_10372542	F051083	LYYETKWHTTLGMRNQTIVPVATFKALFTELIPCAFLYALLRRCGVRRRCPPVVSAWELIQGLIFHVVAEAGTLAQHVKQITGKTITDGALAQRRALLPITVFEQMMEATLQPKGEPTRHAEAFYQGLRLCGVDGSLFSVTNTPQNKKQMRKARSRRGRAA
Ga0210088_1037806	Ga0210088_10378061	F008056	VPRSPEGFFVDLAGKSGLVRRTGIDAGSMLRYVDTTPMAESLERAIHALRGAEVTDLGPAASINQQRIAILDKVRPAIAPNVHAELRRDPRVACQVPARVRIGLARICRELAMKGASDAPAEGAGEQIEVYAVSDGPRARRHAHDEHDSLAMSLSSFSDPMWQIKDRSVAGLRIAASGGIGQSLALGGLVAVRQSDVSEWVLGVVRRLNKLSNEDVEAGVSLIAERVVPVVLHTKRDPKEDLGFIVNGI
Ga0210088_1038220	Ga0210088_10382202	F054877	MKKHANLRVLARFSPSTTDDLDTKLAGLVGQEAVFRYHKFIDDDDTPYSEQWVLTAEDQRFGDYWFPECDLEILQEKHSA
Ga0210088_1038562	Ga0210088_10385622	F074466	AEDIYEIPAEVGRTYFEFDTNLIEFCHPLFQGYYDSHELLANELSRAGVIRVSDVNLSTKNALVVRFKSQRASQTFITRLNAYLLKCIKQRDWERSATVVEVT
Ga0210088_1042622	Ga0210088_10426221	F073726	MKRFRWLLALVLLIAGVAQANGLKLTVIDLDPDDLACGLRYTTVQATVRQAMAVMKAQEFAESDYEMLVAIATVKRPEDCASDVIVTVRKIVPLASSEKFRTRDNRAVLELCRHGGIVVSPILVHERDFLKQLERSV
Ga0210088_1044344	Ga0210088_10443442	F029006	MNKIIITLMAIYFVGDPHLQYLAWLGDLKIYIVAAAIALVSMPWIVEQLDG
Ga0210088_1046825	Ga0210088_10468253	F104864	VEIFDFDMMETIWPMSGYDDPGIWLPKTIADKYNDEQIGRWFLNKYLMDYGNSYGFIITKGEERRMTFKRKISSIDKQL
Ga0210088_1049139	Ga0210088_10491391	F019989	MNTTNQNNNVTAAPSVTIAPRNPAKGVLNFVVTLTTHKDVRSYPCRSMESAIKLAERFIASVTKPARPAAQAETNPHQYDGPPRTAEQ
Ga0210088_1052331	Ga0210088_10523313	F030143	MTVAVTGGLDLAFNQGKGKVLERWLKEMSGEEKSEPAEEKPKLSNRAFSFFTAMPRQGPDSPAREK
Ga0210088_1052359	Ga0210088_10523591	F078289	SQEVIQYFISNQTSSVSSEDVIKMKQSGLNNDDILSAIKSDLYRPEQTSTSMKEAELIAKLKESGMSDEAVLQFIQTVKSTRRVDSDGNVTKQYTNESHRTQYPTTGATFPKLDNYGYDPSNGRFLFFVKPQNQE
Ga0210088_1053041	Ga0210088_10530411	F041848	MTNPSETITAKQYSTAVAARGALFVSIVSVAHSFAHIRIGAVGANNLEVERLNIGEFVHYECPDGALYEIRLLSVEGFDTATLLVTRVK
Ga0210088_1055064	Ga0210088_10550642	F055103	PPIATGCTPVNDLEMLAEQANLDSGLRGFWPVLAGHLGHARLANRMFYWLRRSSPTWLAQNDPEFRVLMKYPG
Ga0210088_1059040	Ga0210088_10590401	F101126	MKFIVDLWLDGYESDEEMKQACIEFILKQLDFSASSVSVEVYEE
Ga0210088_1059377	Ga0210088_10593771	F036767	MDRVDIAKKDYDPKVSRIPELIGRHPGVIAPLVIWKPNPLQLVKPASGSRVSGSMEVELKIREGNEELQKNLKKIVLTIDGQRFEFDKPFCRIAFDTSRAQYRLIKIKAEAIGKNEEESEAVLASYYTYVIAENGVFDKTKPLLLFAGVIEPRIDNPRSAWTLDMYDAAFRFSENIMSHLMHYGFVPDFLKEV
Ga0210088_1060203	Ga0210088_10602032	F053932	MNRWLPYILFPRPGWFILHAAAIVLVFLLGYSVKF
Ga0210088_1063793	Ga0210088_10637931	F008255	MIAQMQEFVAEQTAAFQGQVEKLAKESAETVRETVVGSAETLKSFKSPVRTLARSGVKITTVSQTAVASLIELQSDMLTSALSDAALRLERASRADNIVELVRDQVEMIPATRDRIVEDAQRAVTIFKHAGRDLRGVATHLYERVVETAEEKVPEVKVKVKVSKRKPAKRAARKAPVRA
Ga0210088_1065688	Ga0210088_10656882	F034001	MKRKIKNNDLLPWFTDDHRDLPPAYLKSCREFFDWLGQCNQNGFQAPSSKPQASSSKQQTERKKC
Ga0210088_1066386	Ga0210088_10663861	F018997	MKQKHSPQTKLTEAELQLVEQLRKHPELMERFRTILEITANADGPFKRADEMEGLLIQEMRRLGNTTMESWANRAERTLGEQLKQKDLSAAVHKKKR
Ga0210088_1068311	Ga0210088_10683111	F004798	KRLFALMENQMSDVPGVKQAKAAMGMMPDLTQMQNVVSAMQGVMSSGGSAFESMQKVMGDFARISGMKR
Ga0210088_1070134	Ga0210088_10701343	F006122	MAIILDADVIIRGEKGTFDLSAWLAGQPDEVFEVAAI
Ga0210088_1071699	Ga0210088_10716991	F037275	METVQEVRIKLYIRTDKRTVEKDLGNLDELRWFMNDFFSSVAERRSSKKLLKYVGPERRMRL
Ga0210088_1072084	Ga0210088_10720841	F051238	IVNTFAPGIGSILALALGGLYHGYRQVRNRKVNEALVQGVETARAVLTTTPQGQAADAQFVKWLMEHQKEAGVFATVSGLVDQLSDNPAAKMTAQEIAERVQRAGQRSAGAQVPA
Ga0210088_1072841	Ga0210088_10728411	F006082	PCQYERNQCRAAGGRVYAGGGEEITLAREAEYDKKVLRVRFRAN
Ga0210088_1073963	Ga0210088_10739631	F042655	MDYINKEIKKPKRPNTELLELWLEKELSIENEGTYGNLPIDESHITVQVLPSGNYKVFMSDTVFNIIASHVQPEPHSHKINSEDIFHFWLDIKTNRFHA
Ga0210088_1075754	Ga0210088_10757541	F034003	MKKRRKKNPSVTKPNQLSFDFSTNDPIEIHTPKFDISDLRKELAWEHRPIIEIVKS
Ga0210088_1078164	Ga0210088_10781643	F097618	MGEEKREKGFEGMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA
Ga0210088_1082757	Ga0210088_10827572	F068997	MTKKYYSVLITFIIAVLMAAVPVVYAQTSPGGFTDQPDKSMAAAHESFVKKDMNKAADQIGKAADYVKGEAGKV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300025948: Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences