Metagenome / Metatranscriptome Family F052031

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052031
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	62 residues
Representative Sequence	MTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS
Number of Associated Samples	102
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.11 %
% of genes near scaffold ends (potentially truncated)	21.68 %
% of genes from short scaffolds (< 2000 bps)	68.53 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (62.238 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (13.287 % of family members)
Environment Ontology (ENVO)	Unclassified (36.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.245 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.78% β-sheet: 0.00% Coil/Unstructured: 52.22%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00383	dCMP_cyt_deam_1	41.26
PF03060	NMO	10.49
PF08211	dCMP_cyt_deam_2	5.59
PF12697	Abhydrolase_6	5.59
PF13628	DUF4142	3.50
PF00990	GGDEF	1.40
PF07690	MFS_1	1.40
PF13488	Gly-zipper_Omp	0.70
PF13163	DUF3999	0.70
PF12418	AcylCoA_DH_N	0.70
PF05170	AsmA	0.70
PF01566	Nramp	0.70
PF00378	ECH_1	0.70
PF14279	HNH_5	0.70
PF03631	Virul_fac_BrkB	0.70
PF05990	DUF900	0.70
PF13502	AsmA_2	0.70
PF00771	FHIPEP	0.70
PF03928	HbpS-like	0.70
PF05025	RbsD_FucU	0.70
PF03358	FMN_red	0.70
PF01844	HNH	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	10.49
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	10.49
COG0295	Cytidine deaminase	Nucleotide transport and metabolism [F]	5.59
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.70
COG1869	D-ribose pyranose/furanose isomerase RbsD	Carbohydrate transport and metabolism [G]	0.70
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.70
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.70
COG4154	L-fucose mutarotase/ribose pyranase, RbsD/FucU family	Carbohydrate transport and metabolism [G]	0.70
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.73 %
Unclassified	root	N/A	34.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.24 %
Unclassified	root	N/A	34.27 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.55 %
Unclassified	root	N/A	34.27 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	2.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.27 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	22.38 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	2.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.27 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	17.48 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	2.80 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.27 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	2.80 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.70 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.70 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.70 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	0.70 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.27 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	2.80 %
Desulfurococcaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae	0.70 %
Ideonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella	0.70 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.70 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.70 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.27 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2.80 %
Enteractinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Enteractinococcus	0.70 %
unclassified Ideonella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella	0.70 %
Desulfurococcaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae	0.70 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.70 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.27 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2.80 %
Enteractinococcus helveticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Enteractinococcus → Enteractinococcus helveticum	0.70 %
Ideonella sp. B508-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. B508-1	0.70 %
Desulfurococcaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae	0.70 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.70 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002705\|JGI25156J39149_1001303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10788	Open in IMG/M
3300003316\|rootH1_10051076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. B508-1	4475	Open in IMG/M
3300003316\|rootH1_10115060	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300003320\|rootH2_10057083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	6357	Open in IMG/M
3300003320\|rootH2_10169063	Not Available	1049	Open in IMG/M
3300003752\|Ga0055539_1000386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	17814	Open in IMG/M
3300004153\|Ga0063455_101350485	Not Available	546	Open in IMG/M
3300005175\|Ga0066673_10202621	All Organisms → cellular organisms → Bacteria → Proteobacteria	1132	Open in IMG/M
3300005327\|Ga0070658_10112060	All Organisms → cellular organisms → Bacteria → Proteobacteria	2261	Open in IMG/M
3300005327\|Ga0070658_10117964	All Organisms → cellular organisms → Bacteria → Proteobacteria	2204	Open in IMG/M
3300005327\|Ga0070658_10381204	All Organisms → cellular organisms → Bacteria → Proteobacteria	1210	Open in IMG/M
3300005327\|Ga0070658_10702785	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300005327\|Ga0070658_10704324	Not Available	877	Open in IMG/M
3300005327\|Ga0070658_11548948	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	575	Open in IMG/M
3300005330\|Ga0070690_100048135	All Organisms → cellular organisms → Bacteria → Proteobacteria	2714	Open in IMG/M
3300005336\|Ga0070680_101915564	Not Available	514	Open in IMG/M
3300005338\|Ga0068868_101203458	Not Available	701	Open in IMG/M
3300005339\|Ga0070660_100073776	All Organisms → cellular organisms → Bacteria	2668	Open in IMG/M
3300005339\|Ga0070660_100849610	Not Available	769	Open in IMG/M
3300005339\|Ga0070660_100912051	Not Available	741	Open in IMG/M
3300005339\|Ga0070660_101627779	Not Available	549	Open in IMG/M
3300005364\|Ga0070673_100003556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9725	Open in IMG/M
3300005365\|Ga0070688_100925428	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae	689	Open in IMG/M
3300005366\|Ga0070659_100734161	Not Available	856	Open in IMG/M
3300005437\|Ga0070710_10452714	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300005459\|Ga0068867_100868011	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300005513\|Ga0077120_1004752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	15820	Open in IMG/M
3300005513\|Ga0077120_1031251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3615	Open in IMG/M
3300005513\|Ga0077120_1041209	All Organisms → cellular organisms → Bacteria → Proteobacteria	2841	Open in IMG/M
3300005519\|Ga0077119_10018353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6394	Open in IMG/M
3300005519\|Ga0077119_10023475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5309	Open in IMG/M
3300005519\|Ga0077119_10034529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3903	Open in IMG/M
3300005519\|Ga0077119_10051521	All Organisms → cellular organisms → Bacteria → Proteobacteria	2796	Open in IMG/M
3300005519\|Ga0077119_10126365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300005535\|Ga0070684_100351939	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300005539\|Ga0068853_101738444	Not Available	605	Open in IMG/M
3300005543\|Ga0070672_100364351	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300005563\|Ga0068855_101246506	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300005563\|Ga0068855_102285003	Not Available	542	Open in IMG/M
3300005577\|Ga0068857_100134297	All Organisms → cellular organisms → Bacteria → Proteobacteria	2234	Open in IMG/M
3300005616\|Ga0068852_100908906	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300006195\|Ga0075366_10001365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12201	Open in IMG/M
3300006353\|Ga0075370_10190609	Not Available	1208	Open in IMG/M
3300009093\|Ga0105240_10082110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3958	Open in IMG/M
3300009093\|Ga0105240_10345882	All Organisms → cellular organisms → Bacteria → Proteobacteria	1688	Open in IMG/M
3300009098\|Ga0105245_12347309	Not Available	587	Open in IMG/M
3300009500\|Ga0116229_10230855	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300009551\|Ga0105238_10550119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1158	Open in IMG/M
3300009660\|Ga0105854_1116701	Not Available	841	Open in IMG/M
3300009660\|Ga0105854_1208763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Enteractinococcus → Enteractinococcus helveticum	651	Open in IMG/M
3300009662\|Ga0105856_1090019	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300009709\|Ga0116227_10304408	All Organisms → cellular organisms → Bacteria → Proteobacteria	1220	Open in IMG/M
3300010371\|Ga0134125_10375916	All Organisms → cellular organisms → Bacteria → Proteobacteria	1576	Open in IMG/M
3300010877\|Ga0126356_11421194	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300013296\|Ga0157374_10649774	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300013296\|Ga0157374_11713639	Not Available	653	Open in IMG/M
3300013297\|Ga0157378_10162578	Not Available	2089	Open in IMG/M
3300014325\|Ga0163163_12906503	Not Available	534	Open in IMG/M
3300014968\|Ga0157379_10587716	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300015262\|Ga0182007_10187421	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	718	Open in IMG/M
3300015262\|Ga0182007_10262059	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300016294\|Ga0182041_10695380	Not Available	901	Open in IMG/M
3300016404\|Ga0182037_10422490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300021178\|Ga0210408_10733993	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300021402\|Ga0210385_11102446	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	610	Open in IMG/M
3300021403\|Ga0210397_10220345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300021403\|Ga0210397_10726392	Not Available	764	Open in IMG/M
3300021405\|Ga0210387_10989354	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300021405\|Ga0210387_11314177	Not Available	625	Open in IMG/M
3300021432\|Ga0210384_11468734	Not Available	587	Open in IMG/M
3300022908\|Ga0247779_1025738	All Organisms → cellular organisms → Bacteria → Proteobacteria	1620	Open in IMG/M
3300025226\|Ga0209674_100041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	396231	Open in IMG/M
3300025231\|Ga0207427_100341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	30455	Open in IMG/M
3300025242\|Ga0209258_100515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	37293	Open in IMG/M
3300025246\|Ga0209646_1000069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	230340	Open in IMG/M
3300025253\|Ga0209677_101016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13419	Open in IMG/M
3300025256\|Ga0209759_1001251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	15402	Open in IMG/M
3300025256\|Ga0209759_1021872	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300025272\|Ga0209455_1030542	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300025909\|Ga0207705_10051964	All Organisms → cellular organisms → Bacteria → Proteobacteria	2950	Open in IMG/M
3300025909\|Ga0207705_10097498	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300025909\|Ga0207705_10207783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300025909\|Ga0207705_11243261	Not Available	570	Open in IMG/M
3300025913\|Ga0207695_10033320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5620	Open in IMG/M
3300025914\|Ga0207671_10910340	Not Available	695	Open in IMG/M
3300025919\|Ga0207657_10036465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4401	Open in IMG/M
3300025924\|Ga0207694_10313610	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300025932\|Ga0207690_10002579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10940	Open in IMG/M
3300025932\|Ga0207690_10626197	Not Available	880	Open in IMG/M
3300025932\|Ga0207690_10647597	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300025934\|Ga0207686_10649644	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300025940\|Ga0207691_10957124	Not Available	715	Open in IMG/M
3300025949\|Ga0207667_10018121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7904	Open in IMG/M
3300025949\|Ga0207667_11776496	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	581	Open in IMG/M
3300025960\|Ga0207651_10000555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	15673	Open in IMG/M
3300025960\|Ga0207651_12010609	Not Available	519	Open in IMG/M
3300025972\|Ga0207668_12109808	Not Available	507	Open in IMG/M
3300026089\|Ga0207648_10341287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1349	Open in IMG/M
3300026116\|Ga0207674_10202700	All Organisms → cellular organisms → Bacteria → Proteobacteria	1933	Open in IMG/M
3300026116\|Ga0207674_11855410	Not Available	569	Open in IMG/M
3300027817\|Ga0209112_10030062	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300028562\|Ga0302151_10038938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1725	Open in IMG/M
3300028573\|Ga0265334_10057083	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300028743\|Ga0302262_10177114	Not Available	729	Open in IMG/M
3300028783\|Ga0302279_10006304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12687	Open in IMG/M
3300028865\|Ga0302291_10264081	Not Available	590	Open in IMG/M
3300028877\|Ga0302235_10246985	Not Available	778	Open in IMG/M
3300028882\|Ga0302154_10478735	Not Available	594	Open in IMG/M
3300029895\|Ga0247043_1086854	Not Available	530	Open in IMG/M
3300029913\|Ga0311362_10858032	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300029951\|Ga0311371_10011377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	17367	Open in IMG/M
3300029984\|Ga0311332_11200729	Not Available	612	Open in IMG/M
3300030010\|Ga0302299_10274818	Not Available	883	Open in IMG/M
3300030010\|Ga0302299_10332301	Not Available	786	Open in IMG/M
3300030020\|Ga0311344_10176392	Not Available	2244	Open in IMG/M
3300030520\|Ga0311372_10206406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3272	Open in IMG/M
3300030521\|Ga0307511_10118812	All Organisms → cellular organisms → Bacteria → Proteobacteria	1645	Open in IMG/M
3300030617\|Ga0311356_10578403	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300030906\|Ga0302314_10287082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1916	Open in IMG/M
3300031232\|Ga0302323_100327092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1598	Open in IMG/M
3300031232\|Ga0302323_101806034	Not Available	692	Open in IMG/M
3300031232\|Ga0302323_102255837	Not Available	620	Open in IMG/M
3300031232\|Ga0302323_102871109	Not Available	550	Open in IMG/M
3300031507\|Ga0307509_10218707	All Organisms → cellular organisms → Bacteria → Proteobacteria	1721	Open in IMG/M
3300031507\|Ga0307509_10380877	Not Available	1124	Open in IMG/M
3300031543\|Ga0318516_10030513	All Organisms → cellular organisms → Bacteria → Proteobacteria	2841	Open in IMG/M
3300031716\|Ga0310813_10058361	All Organisms → cellular organisms → Bacteria → Proteobacteria	2871	Open in IMG/M
3300031726\|Ga0302321_100111524	All Organisms → cellular organisms → Bacteria	2756	Open in IMG/M
3300031726\|Ga0302321_100423289	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300031730\|Ga0307516_10000559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	50194	Open in IMG/M
3300031747\|Ga0318502_10016205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3514	Open in IMG/M
3300031835\|Ga0318517_10493561	Not Available	552	Open in IMG/M
3300031902\|Ga0302322_100861733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300031902\|Ga0302322_101233222	Not Available	907	Open in IMG/M
3300031918\|Ga0311367_12425369	Not Available	500	Open in IMG/M
3300031942\|Ga0310916_10269717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300032074\|Ga0308173_11376750	Not Available	662	Open in IMG/M
3300032074\|Ga0308173_12357915	Not Available	502	Open in IMG/M
3300032954\|Ga0335083_11093407	Not Available	623	Open in IMG/M
3300034170\|Ga0370487_0001788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5036	Open in IMG/M
3300034170\|Ga0370487_0022709	All Organisms → cellular organisms → Bacteria → Proteobacteria	1831	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.04%
Environmental	Environmental	41.96%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.04%
Terrestrial	Environmental → Terrestrial	41.26%
Aquatic	Environmental → Aquatic	0.70%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.97%
Soil	Environmental → Terrestrial → Soil	23.08%
Peat	Environmental → Terrestrial → Peat	16.78%
Roots	Host-Associated → Plants → Roots	14.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.19%
Rhizome	Host-Associated → Plants → Rhizome	2.80%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.40%
Peat Moss	Host-Associated → Plants → Peat Moss	1.40%
Freshwater	Environmental → Aquatic → Freshwater	0.70%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.79%
Loam	Environmental → Terrestrial → Soil → Loam	6.29%
Epiphytes	Host-Associated → Plants → Roots → Epiphytes	6.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.20%
Endophytes	Host-Associated → Plants → Roots → Endophytes	3.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.40%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.40%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.40%
Ice	Environmental → Aquatic → Freshwater → Ice	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.09%
Unclassified	Host-Associated → Plants → Roots → Epiphytes → Unclassified	6.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	3.50%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.10%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.40%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.40%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	13.29%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.29%
Arabidopsis Root	Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root	6.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.20%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.50%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	3.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.80%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.80%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.40%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.40%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.40%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.40%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.70%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002705	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS	Host-Associated	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003752	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005519	Combined assembly of arab plate scrape CL_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022870	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L019-104C-5	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025226	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025231	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025242	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025246	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes)	Host-Associated	Open in IMG/M
3300025253	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025256	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025272	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029895	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-C3a	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25156J39149_10013038	3300002705	Arabidopsis Root	MTIDLPATHPAATEHHEEIVQFVFRSAASPGLLAHARALLGAAPKELAESFEQAVRSAGLAS*
rootH1_100510763	3300003316	Sugarcane Root And Bulk Soil	TIDLHATHPAVTEHHEEIVQFVFRSAASSGLLDHARALLDAAPRELAESFEQAVRTSGLAS*
rootH1_101150601	3300003316	Sugarcane Root And Bulk Soil	MTIDLHATHPAATEHHEEIVQFVFRSAASSGLLDHARALLDAAPRELAESFEQAVRTSGLAS*
rootH2_100570836	3300003320	Sugarcane Root And Bulk Soil	MTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRTSGLAS*
rootH2_101690632	3300003320	Sugarcane Root And Bulk Soil	MTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPRELTESFEQAVRSAGLAS*
Ga0055539_100038618	3300003752	Arabidopsis Root	MTIDRHATHPATTEHHEEIVQFVFRSAASSGLLDRARALLDAAPRELAESFEQAVRTSGLAS*
Ga0063455_1013504851	3300004153	Soil	MTIEPQASAAAPQPHPEEMVQFLFRSSASTGLLHRARALLDQAPRELSESFEQAVRTSGL
Ga0066673_102026212	3300005175	Soil	MTIDLPVTHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRTSGLAS*
Ga0070658_101120603	3300005327	Corn Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRGAGFAS*
Ga0070658_101179643	3300005327	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASSGLLEHARALLGTAPKELAESFEQAVRSAGLAS*
Ga0070658_103812041	3300005327	Corn Rhizosphere	MTIDLHATSPAVSEHHEELVQFVFSSAVCPGLLRNAREILDAAPRELAESFEQAVRGAGLAS*
Ga0070658_107027852	3300005327	Corn Rhizosphere	MTTDPDTHATHATRAAVNEHHDELVQFLFCSSVSPGLLKNAREILDAAPRELAESFEQAVRGAGFAS*
Ga0070658_107043242	3300005327	Corn Rhizosphere	MTIDLATLPATTEHHEEIVQFVFRSALPSGLLQHARAMLDAAPRELAESFEQAVRTAGLAS*
Ga0070658_115489481	3300005327	Corn Rhizosphere	MTIDLPATLPATTEHHVEIVQFVFRSALPSGLLQNARAMLDAAPRELAESFEQALRTAGLAS*
Ga0070690_1000481351	3300005330	Switchgrass Rhizosphere	MTIDLPATHPAATELHEEIVQFVFRSAASSGLLEHARALLGTAPKELAESFEQAVRTSGLAS*
Ga0070680_1019155642	3300005336	Corn Rhizosphere	MTIDLPATLPATTEHHVEIVQFVFRSALPSGLLQNARAILDAAPRELAESFEQALRTAGLAS*
Ga0068868_1012034582	3300005338	Miscanthus Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASSGLLQHARALLGAAPKELAESFEQAVRSSGLAS*
Ga0070660_1000737762	3300005339	Corn Rhizosphere	MTIDLHATLPATTQHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRGAGIAS*
Ga0070660_1008496102	3300005339	Corn Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRSAGLAS*
Ga0070660_1009120511	3300005339	Corn Rhizosphere	MTTDPDTHATHATRAAVNEHHDELVQFLFCSSVSPGLLKNAREILDAAPRELAESFEQAVRGAGLAS*
Ga0070660_1016277791	3300005339	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASSGLLEHARALLGAAPKELAESFEQAVRTAGLAS*
Ga0070673_1000035562	3300005364	Switchgrass Rhizosphere	MTIDLPATLPVTTEHHEEIVQFVFRSALPSGLLQNARAMLDAAPRELAESFEQALRTAGFAS*
Ga0070688_1009254282	3300005365	Switchgrass Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS*
Ga0070659_1007341611	3300005366	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASSGLLAHARALLGAAPKELAESFEQAVRTSGLAS*
Ga0070710_104527141	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPGALLTNARAMLEAAPKELTESFEQALRTAGFAS*
Ga0068867_1008680111	3300005459	Miscanthus Rhizosphere	MTIDLPATHPAAMEHHEEIVQFVFRSTASPGLLEHARALLGAAPKELAESFEQAVRSSGLAS*
Ga0077120_100475212	3300005513	Arabidopsis Rhizosphere	MTIDLHATSPAVSEHHEELVQFVFSSAVCPGLLKNAREILDAAPRELAESFEQAVRGAGLAS*
Ga0077120_10312516	3300005513	Arabidopsis Rhizosphere	MTIDLPATHPAATEHHDEIVQFVFRSTASSDLLAHARALLGAAPRELAESFEQAVRGAGLAS*
Ga0077120_10412095	3300005513	Arabidopsis Rhizosphere	MTIDLHATFPVTTEHHEEIVQFVFRSALPGALLANARAMLEAAPRELTESFEQALRTAGLAS*
Ga0077119_100183538	3300005519	Arabidopsis Root	MTIDLHATLPVTTEHHEEIVQFVFRSALPRALVTNARAMLEAAPRELTESFEQALRGAGFAS*
Ga0077119_100234751	3300005519	Arabidopsis Root	MTIDFHATRPAAAEPHDEMVRFVFRSAAAASLLDDARALLGAAPRELAESFEQAVRSAGLAS*
Ga0077119_100345292	3300005519	Arabidopsis Root	MTIELPATHPAAAEFHEELIQFVFRSAVSSDLLQGAREMLGAAPKELAESFEQAVRTSGFAS*
Ga0077119_100515213	3300005519	Arabidopsis Root	MTIDPPATHPAATEHHEEMVQFVFRSAASSGLLEHARALLGAAPRELAESFEQAVRSAGLAS*
Ga0077119_101263652	3300005519	Arabidopsis Root	MTIDLPATLPATTEHHEEIVQFLFRSALPGALLKNARAMLDAAPRELAESFEQALR
Ga0070679_1015862261	3300005530	Corn Rhizosphere	MTIDPTATLPTAAAVEHHDELVQFVFRATGAPGLLAHARELLDAAPRELADSFEQAMRTAGLAS*
Ga0070684_1003519392	3300005535	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSAASPGLLAHARALLGAAPKELAESFEQAVRSAG
Ga0068853_1017384441	3300005539	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS*
Ga0070672_1003643512	3300005543	Miscanthus Rhizosphere	MTIELHATHPATAQFHEELVQFVFRSAVSSGLLQNARAMLDAAPKELAESFEQAVRSSGLAS*
Ga0068855_1012465062	3300005563	Corn Rhizosphere	MTIDLYATLLVTTQHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRGAGIAS*
Ga0068855_1022850032	3300005563	Corn Rhizosphere	MTIDLPATLPATTEHHEEIVQFVYRSALPSGLLQNARAMLDAAPRELAESFEQALRTAGLAT*
Ga0068857_1001342972	3300005577	Corn Rhizosphere	MTIDLPATHSTVTEHHEEIVQFVFRSAASAGLLEHARALLGAAPKELAESFEQAVRSGGFAS*
Ga0068852_1009089061	3300005616	Corn Rhizosphere	NRWPWPTPENRCMTIDLPATHPAATEHHEEIVQFVFRSAASPGLLAHARALLGAAPKELAESFEQAVRSAGLAS*
Ga0075366_1000136511	3300006195	Populus Endosphere	MTIDLPATHPAAMEHHEEIVQFVFRSTASPGLLQHARALLGAAPKELAESFEQAVRSSGLAS*
Ga0075370_101906092	3300006353	Populus Endosphere	MTIDLHATPPAATPHHDEIVRFVFRSAASSSLLDSARALLGAAPKELAESFEQAVRSAGLAS*
Ga0105240_100821101	3300009093	Corn Rhizosphere	NRWPWPTPENRCMTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS*
Ga0105240_103458821	3300009093	Corn Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPSGLLQNARAMLDAAPRELAESFEQALRRAGIAS*
Ga0105245_123473092	3300009098	Miscanthus Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASPGLLQHARALLGAAPKELAESFEQAVRSSGLAS*
Ga0116229_102308552	3300009500	Host-Associated	MTIDLQATFPATAEHPEDIVQFVFRSAMSSGLLKNARALLDAAPKELAESFEQAVRSAGLAS*
Ga0105238_105501193	3300009551	Corn Rhizosphere	WPWPTPENRCMTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS*
Ga0105854_11167012	3300009660	Permafrost Soil	MTIDLHATLPASTAYHDDIVQFVFRSAVSSGLLESARVMLAAAPKELAESFEQAVRGAGLAS*
Ga0105854_12087632	3300009660	Permafrost Soil	MTIDLHATCPATAEFHEEIVQFVFRSAVSTGLLQNARAMLDAAPRELAESFEQAVRTSGLAS*
Ga0105856_10900192	3300009662	Permafrost Soil	MTIDLHATCPATEQHPEEIVRFVFRSTVSSGLLTNARALLDAAPRELAESFEQAVRTAGLAS*
Ga0116227_103044082	3300009709	Host-Associated	MTIDLQTAFPATAEHHEEIVQFVFRSAASSGLLKNARALLDAAPKELAESFEQAVRSAGLAS*
Ga0134125_103759161	3300010371	Terrestrial Soil	MTIDLPATHPAATEHHEEIVQFVFRSTASSDLLAHARALLGAAPRELAESFEQAVRGAGLAS*
Ga0126356_114211942	3300010877	Boreal Forest Soil	MTIDLHATFPATAEIHDELVQFVFRPAASSGLLQNARALLDSAPRELAESFEQAVRISGLAS*
Ga0157374_106497741	3300013296	Miscanthus Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPGALLTNARAMLEAAPKELTESFEQALRTA
Ga0157374_117136391	3300013296	Miscanthus Rhizosphere	MTIELHATHPATAQFHEELVQFVFRSTASPDLLQHTRALLGATPKELAESFEQAVRSSG
Ga0157378_101625782	3300013297	Miscanthus Rhizosphere	MTIDLPATHPAATELHEEIVQFVFRSAASSGLLEHARALLGTAPKELAESFEQAVRTSGFAS*
Ga0163163_129065031	3300014325	Switchgrass Rhizosphere	RCMTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS*
Ga0157379_105877162	3300014968	Switchgrass Rhizosphere	MTIDLPVTHPAAMEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRTSGLAS*
Ga0182007_101874212	3300015262	Rhizosphere	MTIDLHATLPATTEHHEEIVQFLFRSALPGALLKNARAMLDAAPRELAESFEQALRTAGIAS*
Ga0182007_102620591	3300015262	Rhizosphere	MTIDLQAPHPAAAEHHAEIVRFVFRSAASAGLLDDARALLGAAPKELAESFEQAVRSAGLAS*
Ga0182041_106953802	3300016294	Soil	WPTPENRCMTIDRHATHPAATTSPGELVQFVFRSALSSGLLKTAREMLDAAPRELAESFEQAVRRAGLAS
Ga0182037_104224901	3300016404	Soil	NRCMTIDRHATHPAATTSPGELVQFVFRSALSSGLLKTAREMLDAAPRELAESFEQAVRRAGLAS
Ga0210408_107339931	3300021178	Soil	MTIELHASFPAATEVHEEIVRFVFRAAVASSLLVNARAMLDAAPKELAE
Ga0210385_111024462	3300021402	Soil	RWPGPTPENRCMTIDLHATLPATAEIHDELVQFVFRPAAASGLLKNARALLDSAPRELAESFEQAVRTSGLAS
Ga0210397_102203453	3300021403	Soil	MTIDLLKTHPATASFHEELVQFMFHSAVTTGLLENARAMLDAAPKELAESFEQAVRRSGLAS
Ga0210397_107263922	3300021403	Soil	MTIDFHGACPAVPDHPDEIVRFVFRAGVSPGLLTSARALLDAAPKELAESFEQAVRSAGLAS
Ga0210387_109893541	3300021405	Soil	TAEIHDELVQFVFRPAAASGLLKNARALLDSAPRELAESFEQAVRTSGLAS
Ga0210387_113141772	3300021405	Soil	MTIDFHATCPATAEIHDELVQFVFRSAVSPGLLKNARALLDSAPRELAESFEQAVRTAGLPS
Ga0210384_114687342	3300021432	Soil	ATEVHDEIVRFVFRAAVASGLLVNARAMLDAAPKELAESFEQAMRGAGIAS
Ga0247782_10071182	3300022870	Plant Litter	MTIDPTATLPTAAAVEHHDELVQFVFRATGAPGLLAHARELLDAAPRELADSFEQAMRTAGLAS
Ga0247779_10257383	3300022908	Plant Litter	MTIDLHATFPATTEHHEEIVQFVFRSAAAPGLLRNARAMLDTAPKELAESFEQAVRSAGIAS
Ga0209674_100041122	3300025226	Arabidopsis Root	MTIDRHATHPATTEHHEEIVQFVFRSAASSGLLDRARALLDAAPRELAESFEQAVRTSGLAS
Ga0207427_1003418	3300025231	Arabidopsis Rhizosphere	MTIDLPATHPAATEHHDEIVQFVFRSTASSDLLAHARALLGAAPRELAESFEQAVRGAGLAS
Ga0209258_10051536	3300025242	Arabidopsis Root	MTIDPPATHPAATEHHEEMVQFVFRSAASSGLLEHARALLGAAPRELAESFEQAVR
Ga0209646_1000069170	3300025246	Arabidopsis Root	MTIDLPATHPAATEHHEEIVQFVFRSAASPGLLAHARALLGAAPKELAESFEQAVRSAGLAS
Ga0209677_10101610	3300025253	Arabidopsis Root	MTIDLHATSPAVSEHHEELVQFVFSSAVCPGLLKNAREILDAAPRELAESFEQAVRGAGLAS
Ga0209759_100125116	3300025256	Arabidopsis Root	MTIDLHATLPVTTEHHEEIVQFVFRSALPRALVTNARAMLEAAPRELTESFEQALRGAGFAS
Ga0209759_10218723	3300025256	Arabidopsis Root	MTIELPATHPAAAEFHEELIQFVFRSAVSSDLLQGAREMLGAAPKELAESFEQAVRTSGFAS
Ga0209455_10305422	3300025272	Arabidopsis Root	MTIDPPATHPAATEHHEEMVQFVFRSAASSGLLEHARALLGAAPRELAESFEQAVRSAGLAS
Ga0207705_100519642	3300025909	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASSGLLEHARALLGTAPKELAESFEQAVRSAGLAS
Ga0207705_100974983	3300025909	Corn Rhizosphere	MTIDLATLPATTEHHEEIVQFVFRSALPSGLLQHARAMLDAAPRELAESFEQAVRTAGLA
Ga0207705_102077832	3300025909	Corn Rhizosphere	MTTDPDTHATHATRAAVNEHHDELVQFLFCSSVSPGLLKNAREILDAAPRELAESFEQAVRGAGLAS
Ga0207705_112432612	3300025909	Corn Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRCAGFAS
Ga0207695_100333207	3300025913	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS
Ga0207671_109103402	3300025914	Corn Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRGAGIAS
Ga0207657_100364655	3300025919	Corn Rhizosphere	MTIDLHATLPATTQHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRGAGIAS
Ga0207694_103136101	3300025924	Corn Rhizosphere	PWPTPENRCMTIDLPATHPAATEHHEEIVQFVFRSAASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS
Ga0207690_1000257911	3300025932	Corn Rhizosphere	PATTQHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRGAGIAS
Ga0207690_106261972	3300025932	Corn Rhizosphere	MTIDLPATHPAAKEHHDEIVQFVFRSTASSGLLAHARALLGAAPKELAESFEQAVRTSGLAS
Ga0207690_106475972	3300025932	Corn Rhizosphere	MTIDLHATFPATTEHHEEIVQFVFRSALPGALLTNARAMLEAAPRELTESFEQALRTAGFAS
Ga0207686_106496442	3300025934	Miscanthus Rhizosphere	MTIDLPATHPAATELHEEIVQFVFRSAASSGLLEHARALLGTAPKELAESFEQAVRTSGLAS
Ga0207691_109571243	3300025940	Miscanthus Rhizosphere	MTIELHATHPATAQFHEELVQFVFRSAVSSGLLQNARAMLDAAPKELAESFEQAVRSSGLAS
Ga0207667_100181219	3300025949	Corn Rhizosphere	MTIDLPATHPAATEHHEEIVQFVFRSTASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS
Ga0207667_117764962	3300025949	Corn Rhizosphere	MTIDLPATLPATTEHHVEIVQFVFRSALPSGLLQNARAMLDAAPRELAESFEQALRTAGLAS
Ga0207651_100005552	3300025960	Switchgrass Rhizosphere	MTIDLPATLPVTTEHHEEIVQFVFRSALPSGLLQNARAMLDAAPRELAESFEQALRTAGFAS
Ga0207651_120106091	3300025960	Switchgrass Rhizosphere	AATELHEEIVQFVFRSAASSGLLEHARALLGTAPKELAESFEQAVRTSGLAS
Ga0207668_121098082	3300025972	Switchgrass Rhizosphere	MTIDLPATHPAATELHEEIVQFVFRSAASSGLLEHASALLGTAPKELAESFEQAVRTSGLAS
Ga0207648_103412871	3300026089	Miscanthus Rhizosphere	MTIDLPATHPAAMEHHEEIVQFVFRSTASPGLLEHARALLGAAPKELAESFEQAVRSSGLAS
Ga0207674_102027003	3300026116	Corn Rhizosphere	MTIDLPATHSTVTEHHEEIVQFVFRSAASAGLLEHARALLGAAPKELAESFEQAVRSGGFAS
Ga0207674_118554101	3300026116	Corn Rhizosphere	AATEHHEEIVQFVFRSTASSGLLEHARALLGAAPKELAESFEQAVRSAGLAS
Ga0209112_100300622	3300027817	Forest Soil	MTIDLHATFPATTEHHEEIVQFVFRSAVSTGLLQRARAMLDAAPKELAESFEQAMRTAGLAS
Ga0302151_100389381	3300028562	Bog	MTIDLHATCPATAEFHEEIVQFVFRSAVSTGLLQNARAMLDAAPRELAESFEQAVRTSGLAS
Ga0265334_100570832	3300028573	Rhizosphere	MTIERHANCPATAQCHEEIVQFVFRPASSSGLLTNARALLDTAPRELAESFEQAVRAAGLAS
Ga0302262_101771142	3300028743	Fen	MTIEHRATGPDAAERHDEMVQFLFCATGATGLLAHARALLDAAPKELAESFEQAVRTAGLAS
Ga0302279_100063045	3300028783	Bog	MTTELHAHPSACAECHDEIVQFVFRTAASLGLLTNARAMLDAAPQELAESFEQAVRSAGLAS
Ga0302291_102640812	3300028865	Fen	RCMTTEHRATGLDAAERHDEMVQFLFCAAGATGLLAPARALLDAAPKELAESFEQAVRSAGLAS
Ga0302235_102469852	3300028877	Palsa	MTIERQAILPATTEHHEEIVQFLFRSTVSTGLLQRARALLEAAPKELAESFEQAVRSSGLAS
Ga0302154_104787351	3300028882	Bog	MTIDLHATCPATAEIHDELVQFVFRPAGSSGLLKNARAMLDDAPRELAESFEQAVRSSGLAS
Ga0247043_10868542	3300029895	Cryconite	MTLDLRATCPATTEFHAEIVQFVFRSAVSSGLLKKARAMLDAAPPELAESFEQAVRTAGLAS
Ga0311362_108580323	3300029913	Bog	TAEFHEEIVQFVFRSAVSTGLLQNARAMLDAAPRELAESFEQAVRTSGLAS
Ga0311371_1001137716	3300029951	Palsa	MTIDLATTHPATASFHEELVQFMFHSAVTSGLLENARAMLDAAPKELAESFEQAVRKSGLAS
Ga0311332_112007292	3300029984	Fen	MTIDLHAPGLACAERHDDMVQFVYREAGATGLLAHARALLDAAPKELAESFEQAVRISGLAS
Ga0302299_102748182	3300030010	Fen	MTIEHRATGPDAAERHDEMVQFLFCAAGATGLLAPARALLDAAPKELAESFEQAVRSAGLAS
Ga0302299_103323012	3300030010	Fen	MTIDLHATGSGTAECHDDIVQFVYRAAGAPGLLARARALLDAAPKELAESFEQAVRTSGLAS
Ga0311344_101763921	3300030020	Bog	TRENPCMTIDLHATCPATAEFHEEIVQFVFRSAVSTGLLQNARAMLDAAPRELAESFEQAVRTSGLAS
Ga0311372_102064063	3300030520	Palsa	MTIDLHATPSAKAEFHDELVQFVFRPAVSSGLLKNARALLDAAPKELAESFEQAVRTSGLAS
Ga0307511_101188123	3300030521	Ectomycorrhiza	MTIDLPATHPATAEFHEELIQFVFRSSVSSDLLQGAREMLGAAPKELAESFEQAVRTSGFAS
Ga0311356_105784031	3300030617	Palsa	MTIDLHATCPATAEFHEEIVQFVFRSAVSTGLLQNARAMLDAAPRELAESFEQA
Ga0302314_102870823	3300030906	Palsa	MTIDLHATFPATAEIHDELVQFVFRPAVSSGLLKNARALLDSAPRELAESFEQAVRTS
Ga0302323_1003270922	3300031232	Fen	MTIEPYAPFPAPPEPHVEIVRFVFRAARATGLLANARVMLDAAPRELAESFEQAVRRAGIAS
Ga0302323_1018060342	3300031232	Fen	MTIDLHAHFPATAEYSEEIVQFVFRSAVSTGLLQRARALLDAAPRELAESFEQAVRGSGLTS
Ga0302323_1022558372	3300031232	Fen	MTIDLQATCPATAEHHDDIVQFVFRSAVSAGLLTNARALLDAAPKELAESFEQAVRTAGLAS
Ga0302323_1028711091	3300031232	Fen	MTIEHRATGPDAAERHDEMVQFLFCAAGATGLLAPARALLDAAPKELAESF
Ga0307509_102187072	3300031507	Ectomycorrhiza	MTIELPATHPATAEFHEELIQFVFRSAVSSDLVQGAREMLGAAPKELAESFEQAVRTSGFAS
Ga0307509_103808772	3300031507	Ectomycorrhiza	MTIDLHATFPATTAHHEDIVQFVFRSAVSSGLLENARALLDAAPRELAESFEQAVRSAGLAS
Ga0318516_100305133	3300031543	Soil	MTIDRHATHPAATTSPGELVQFVFRSALSSGLLKTAREMLDAAPRELAESFEQAVRRAGLAS
Ga0310813_100583613	3300031716	Soil	MTIDLPATHPAAMEHHEEIVQFVFRSTASPGLLQHARALLGAAPKELAESFEQAVRSSGLAS
Ga0302321_1001115242	3300031726	Fen	MTIEPYAPFPAPPEPHEEIVRFVFRAALATGLLANARVMLDAAPSELAESFEQAVRRAGIAS
Ga0302321_1004232893	3300031726	Fen	MTTEHRATGLDAAERHDEMVQFLFCATGATGLLAHARALLDAAPKELAESFEQAVRTAGLAS
Ga0307516_1000055937	3300031730	Ectomycorrhiza	MTIDLHATLPATTAHHEDIVQFVFRSAVSSGLLENARALLDAAPRELAESFEQAVRSAGLAS
Ga0318502_100162054	3300031747	Soil	MTIDPHATHPAATTSPGELVQFVFRSALSSGLLKTAREMLDAAPRELAESFEQAVRRAGLAS
Ga0318517_104935611	3300031835	Soil	TIDRHATHPAATTSPGELVQFVFRSALSSGLLKTAREMLDAAPRELAESFEQAVRRAGLA
Ga0302322_1008617333	3300031902	Fen	MTIEPDAPFPAPPEPHEEIVRFVFRAALASGLLANARVMLDAAPRELAESFEQAVRRAGIAS
Ga0302322_1012332222	3300031902	Fen	MTIDLHAHFPATADYSEEIVQFVFRSAVSTGLLQRARALLDAAPRELAESFEQAVRGSGLTS
Ga0311367_124253692	3300031918	Fen	MTIDLHATGSGTAECHDDIVQFVYRAAGAPGLLARARALLDAAPKELAESFEQAVRTSGL
Ga0310916_102697173	3300031942	Soil	HATHPAATTSPGELVQFVFRSALSSGLLKTAREMLDAAPRELAESFEQAVRRAGLAS
Ga0308173_113767502	3300032074	Soil	MTIDPHAPFTAPSEPHDEIVRFVFRAAVSSGLLQGARTLLDAAPRELAESFEQALRGAGIAS
Ga0308173_123579152	3300032074	Soil	MTIDLPATHPAATEHHDEIVQFVFRSTASSGLLEHARALLGAAPKELAESFEQAVRSSGLAS
Ga0335083_110934072	3300032954	Soil	MTIEFRATPPAATAHQDEIVQFLFWTGASTSLLQRARALLDAAPRELAESFEQAVRSAGIAS
Ga0370487_0001788_2001_2189	3300034170	Untreated Peat Soil	MTIDLHATCPATAEVHEEIVQFVFRSAVSSGLLDHARAMLGAAPRELAESFEQAVRASGLAS
Ga0370487_0022709_121_309	3300034170	Untreated Peat Soil	MTIDLHATCPATAEYHEEIVQFVFRSAVSSGLLEHARAMLGAAPRELAESFEQAVRTAGLAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052031

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences