Metagenome Family F053349

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F053349
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	80 residues
Representative Sequence	MKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGATPRSTAELNRQSAEILKFIAESL
Number of Associated Samples	97
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.25 %
% of genes near scaffold ends (potentially truncated)	32.62 %
% of genes from short scaffolds (< 2000 bps)	82.27 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (56.738 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.532 % of family members)
Environment Ontology (ENVO)	Unclassified (41.135 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.284 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.04% β-sheet: 0.00% Coil/Unstructured: 37.96%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.7028
a.118.1.19: Exportin HEAT-like repeat	d3ibva_	3ibv	0.70078
f.72.1.1: Double antiporter-like subunits from respiratory complex I	d3rkol_	3rko	0.68449
f.72.1.0: automated matches	d6khid_	6khi	0.68038
a.118.1.1: Armadillo repeat	d1wa5c_	1wa5	0.67955

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01627	Hpt	26.95
PF00111	Fer2	6.38
PF13279	4HBT_2	2.84
PF01442	Apolipoprotein	2.13
PF13180	PDZ_2	0.71
PF07992	Pyr_redox_2	0.71
PF13437	HlyD_3	0.71
PF13450	NAD_binding_8	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
All Organisms	root	All Organisms	43.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
cellular organisms	root	All Organisms → cellular organisms	43.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.66 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.71 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.84 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.71 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.71 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.84 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.71 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.71 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.84 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.71 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.71 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10949918	Not Available	636	Open in IMG/M
3300001661\|JGI12053J15887_10108857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1494	Open in IMG/M
3300001686\|C688J18823_11019359	Not Available	525	Open in IMG/M
3300004268\|Ga0066398_10013141	Not Available	1264	Open in IMG/M
3300004633\|Ga0066395_10948806	Not Available	523	Open in IMG/M
3300005186\|Ga0066676_10799240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300005332\|Ga0066388_100021541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5675	Open in IMG/M
3300005332\|Ga0066388_100022512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5593	Open in IMG/M
3300005332\|Ga0066388_100130303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3058	Open in IMG/M
3300005332\|Ga0066388_100219559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2530	Open in IMG/M
3300005332\|Ga0066388_100275812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2324	Open in IMG/M
3300005332\|Ga0066388_101406110	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300005332\|Ga0066388_101958240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1049	Open in IMG/M
3300005332\|Ga0066388_102737335	Not Available	900	Open in IMG/M
3300005332\|Ga0066388_103182932	Not Available	839	Open in IMG/M
3300005332\|Ga0066388_108716829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300005446\|Ga0066686_10185849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1388	Open in IMG/M
3300005451\|Ga0066681_10706850	Not Available	613	Open in IMG/M
3300005455\|Ga0070663_101372880	Not Available	625	Open in IMG/M
3300005459\|Ga0068867_102313572	Not Available	511	Open in IMG/M
3300005713\|Ga0066905_100053589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2487	Open in IMG/M
3300005713\|Ga0066905_100395754	Not Available	1119	Open in IMG/M
3300005764\|Ga0066903_100185511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3078	Open in IMG/M
3300005764\|Ga0066903_100547232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1983	Open in IMG/M
3300005764\|Ga0066903_100920937	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300005764\|Ga0066903_102424022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1015	Open in IMG/M
3300005833\|Ga0074472_10878666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4644	Open in IMG/M
3300005833\|Ga0074472_11282682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1783	Open in IMG/M
3300005883\|Ga0075299_1001077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1423	Open in IMG/M
3300005937\|Ga0081455_10014490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7724	Open in IMG/M
3300006032\|Ga0066696_10027536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3003	Open in IMG/M
3300006038\|Ga0075365_10276925	Not Available	1180	Open in IMG/M
3300006237\|Ga0097621_102016094	Not Available	551	Open in IMG/M
3300006755\|Ga0079222_12432451	Not Available	525	Open in IMG/M
3300006794\|Ga0066658_10403001	Not Available	742	Open in IMG/M
3300006796\|Ga0066665_10309791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1272	Open in IMG/M
3300006800\|Ga0066660_10102384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2030	Open in IMG/M
3300006854\|Ga0075425_100347389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1708	Open in IMG/M
3300009012\|Ga0066710_100911616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1353	Open in IMG/M
3300009090\|Ga0099827_10233316	Not Available	1541	Open in IMG/M
3300009090\|Ga0099827_11027685	Not Available	715	Open in IMG/M
3300009094\|Ga0111539_12387697	Not Available	613	Open in IMG/M
3300009137\|Ga0066709_101550865	Not Available	952	Open in IMG/M
3300009143\|Ga0099792_10000390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16402	Open in IMG/M
3300009176\|Ga0105242_10430169	Not Available	1239	Open in IMG/M
3300009792\|Ga0126374_10618415	Not Available	802	Open in IMG/M
3300009804\|Ga0105063_1019502	Not Available	797	Open in IMG/M
3300010043\|Ga0126380_10090111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1807	Open in IMG/M
3300010043\|Ga0126380_10196823	Not Available	1345	Open in IMG/M
3300010046\|Ga0126384_10151242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1787	Open in IMG/M
3300010046\|Ga0126384_11005712	Not Available	759	Open in IMG/M
3300010046\|Ga0126384_11864048	Not Available	572	Open in IMG/M
3300010047\|Ga0126382_10099807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1872	Open in IMG/M
3300010047\|Ga0126382_10178081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1489	Open in IMG/M
3300010047\|Ga0126382_10203563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1410	Open in IMG/M
3300010047\|Ga0126382_10493677	Not Available	982	Open in IMG/M
3300010047\|Ga0126382_12212025	Not Available	529	Open in IMG/M
3300010047\|Ga0126382_12379557	Not Available	514	Open in IMG/M
3300010358\|Ga0126370_10512448	Not Available	1016	Open in IMG/M
3300010358\|Ga0126370_10539768	Not Available	994	Open in IMG/M
3300010358\|Ga0126370_11489012	Not Available	643	Open in IMG/M
3300010358\|Ga0126370_11685605	Not Available	610	Open in IMG/M
3300010359\|Ga0126376_10212590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1613	Open in IMG/M
3300010359\|Ga0126376_10614378	Not Available	1030	Open in IMG/M
3300010359\|Ga0126376_11956271	Not Available	627	Open in IMG/M
3300010360\|Ga0126372_10020872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3862	Open in IMG/M
3300010360\|Ga0126372_10353669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1319	Open in IMG/M
3300010360\|Ga0126372_11344655	Not Available	745	Open in IMG/M
3300010360\|Ga0126372_11742169	Not Available	665	Open in IMG/M
3300010360\|Ga0126372_13112318	Not Available	515	Open in IMG/M
3300010362\|Ga0126377_10182201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1999	Open in IMG/M
3300010362\|Ga0126377_10218645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1836	Open in IMG/M
3300010362\|Ga0126377_10282434	Not Available	1629	Open in IMG/M
3300010362\|Ga0126377_10562189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1181	Open in IMG/M
3300010362\|Ga0126377_12514234	Not Available	591	Open in IMG/M
3300010362\|Ga0126377_13567719	Not Available	503	Open in IMG/M
3300010366\|Ga0126379_10426564	Not Available	1381	Open in IMG/M
3300010397\|Ga0134124_10059081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	3241	Open in IMG/M
3300010398\|Ga0126383_10159733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2114	Open in IMG/M
3300010398\|Ga0126383_13378749	Not Available	521	Open in IMG/M
3300010400\|Ga0134122_10062555	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300010401\|Ga0134121_12571126	Not Available	552	Open in IMG/M
3300012207\|Ga0137381_10477242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1088	Open in IMG/M
3300012211\|Ga0137377_10931219	Not Available	800	Open in IMG/M
3300012353\|Ga0137367_10476404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	880	Open in IMG/M
3300012357\|Ga0137384_10159260	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300012357\|Ga0137384_10574040	Not Available	922	Open in IMG/M
3300012359\|Ga0137385_10666312	Not Available	871	Open in IMG/M
3300012361\|Ga0137360_11669852	Not Available	542	Open in IMG/M
3300012361\|Ga0137360_11882496	Not Available	504	Open in IMG/M
3300012532\|Ga0137373_10289647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1306	Open in IMG/M
3300012683\|Ga0137398_10648809	Not Available	732	Open in IMG/M
3300012685\|Ga0137397_10667132	Not Available	773	Open in IMG/M
3300012924\|Ga0137413_10272011	Not Available	1172	Open in IMG/M
3300012925\|Ga0137419_11108226	Not Available	660	Open in IMG/M
3300012948\|Ga0126375_10055510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2137	Open in IMG/M
3300012948\|Ga0126375_10233952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1232	Open in IMG/M
3300012957\|Ga0164303_10600222	Not Available	725	Open in IMG/M
3300015054\|Ga0137420_1146936	Not Available	749	Open in IMG/M
3300015241\|Ga0137418_10151483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2043	Open in IMG/M
3300015245\|Ga0137409_10695202	Not Available	851	Open in IMG/M
3300015358\|Ga0134089_10536264	Not Available	517	Open in IMG/M
3300015371\|Ga0132258_12504167	Not Available	1291	Open in IMG/M
3300016294\|Ga0182041_10171078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1700	Open in IMG/M
3300016387\|Ga0182040_11886279	Not Available	512	Open in IMG/M
3300017644\|Ga0182740_1035775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1591	Open in IMG/M
3300018000\|Ga0184604_10036146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1289	Open in IMG/M
3300018053\|Ga0184626_10125496	Not Available	1091	Open in IMG/M
3300018072\|Ga0184635_10259280	Not Available	687	Open in IMG/M
3300018076\|Ga0184609_10053961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1721	Open in IMG/M
3300018078\|Ga0184612_10111221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1434	Open in IMG/M
3300018078\|Ga0184612_10388737	Not Available	702	Open in IMG/M
3300018431\|Ga0066655_10221199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1187	Open in IMG/M
3300018476\|Ga0190274_11902938	Not Available	690	Open in IMG/M
3300018482\|Ga0066669_11795802	Not Available	566	Open in IMG/M
3300021086\|Ga0179596_10005578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	3786	Open in IMG/M
3300021476\|Ga0187846_10088926	Not Available	1336	Open in IMG/M
3300022756\|Ga0222622_10239263	Not Available	1224	Open in IMG/M
3300026006\|Ga0208533_100072	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300026285\|Ga0209438_1054218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1322	Open in IMG/M
3300026555\|Ga0179593_1253834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2406	Open in IMG/M
3300027388\|Ga0208995_1093470	Not Available	523	Open in IMG/M
3300027735\|Ga0209261_10052559	Not Available	1024	Open in IMG/M
3300027831\|Ga0209797_10039360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2129	Open in IMG/M
3300027840\|Ga0209683_10001744	All Organisms → cellular organisms → Bacteria → Proteobacteria	8332	Open in IMG/M
3300027874\|Ga0209465_10132381	Not Available	1234	Open in IMG/M
3300031198\|Ga0307500_10243877	Not Available	552	Open in IMG/M
3300031543\|Ga0318516_10275542	Not Available	973	Open in IMG/M
3300031719\|Ga0306917_10160405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1677	Open in IMG/M
3300031720\|Ga0307469_12248371	Not Available	531	Open in IMG/M
3300031726\|Ga0302321_102920493	Not Available	558	Open in IMG/M
3300031740\|Ga0307468_101382281	Not Available	646	Open in IMG/M
3300031770\|Ga0318521_10467817	Not Available	756	Open in IMG/M
3300031910\|Ga0306923_12011226	Not Available	586	Open in IMG/M
3300031942\|Ga0310916_10491733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300032001\|Ga0306922_12338967	Not Available	512	Open in IMG/M
3300032059\|Ga0318533_10518426	Not Available	874	Open in IMG/M
3300032094\|Ga0318540_10603677	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.62%
Host-Associated	Host-Associated	6.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.11%
Aquatic	Environmental → Aquatic	8.51%
Plants	Host-Associated → Plants	6.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.69%
Sediment	Environmental → Aquatic → Sediment	6.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.84%
Freshwater	Environmental → Aquatic → Freshwater	2.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.13%
Roots	Host-Associated → Plants → Roots	1.42%
Peat	Environmental → Terrestrial → Peat	0.71%
Cave	Environmental → Terrestrial → Cave	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.25%
Loam	Environmental → Terrestrial → Soil → Loam	16.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Sand	Environmental → Terrestrial → Soil → Sand	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.84%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.13%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.42%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.71%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.71%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017644	Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 5th pass 37_C Kraft BY (version 2)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026006	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_109499182	3300000550	Soil	MKTSRTFQDGAYAMAALSAAVVAFRLLVKKGLLTREEAVRSLLDEAVQRAIFAESVNEPRSTAELNRQSAEILKFIAESL*
JGI12053J15887_101088572	3300001661	Forest Soil	MKVYQEGAYAMASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLGTKTAEMNRQSAEILKMIAQGL*
C688J18823_110193591	3300001686	Soil	MKSFQDGAYAMAALSATVVALRLLLKKGLLTREEAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0066398_100131413	3300004268	Tropical Forest Soil	MKSFQDGAYAMAALSASVVALRVLVDKGVVPREELVRAILDEAVQRALFAESKLQGEAIEQNTAELNRQSAEILKFVAENL*
Ga0066395_109488061	3300004633	Tropical Forest Soil	MKTYEESAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGENEAEMNRQSAEILKFMAQDL*
Ga0066676_107992402	3300005186	Soil	CDMKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGATPRSTAELNRQSAEILKFIAESL*
Ga0066388_1000215412	3300005332	Tropical Forest Soil	MKTFQDGAYAMAAPSAAVVAFRILVKKGLLTRDEAVRSLLDEAMQRAIFAETLHEGGSPRSTAELNRQSAEILKVIAESL*
Ga0066388_1000225126	3300005332	Tropical Forest Soil	MSLPARRSRHEDPEMKTFLDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRGLLDEAVQRAIFAESLHEGATPHSTAELNRQSAEILKVIAESL*
Ga0066388_1001303033	3300005332	Tropical Forest Soil	MKSFQDGAYAMAALSASVVTLRVLVHKGVVPREELVRAILDEAVQRALFAESKLQGGAIEQNTAELNRQSAEILKLVAENL*
Ga0066388_1002195594	3300005332	Tropical Forest Soil	MNLPARRLRQDDSETKTFQDGAYAMAALSAAVVAFRILVKKGLLARDEAVRGLLDEAVQRAIFAESLHEGATPRSTAELNRQSAEILKFIAESL*
Ga0066388_1002758123	3300005332	Tropical Forest Soil	MKTFQDGAYAMAALSACVVAMRTLVQKGLASREEVVRAILDEAVQRAIFAEARHDATIGQTTVEMNRQSAEILKLMAESL*
Ga0066388_1014061102	3300005332	Tropical Forest Soil	MKSFQDGAYAMAALSASVVALRALVDKGVVPREELVRAILDEAVQRALFAESKLQGEAIEQNTAELNRQSAEILKFVAENL*
Ga0066388_1019582402	3300005332	Tropical Forest Soil	MKTYEDSAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGENEAEMNRQSAEILKFMAQ
Ga0066388_1027373352	3300005332	Tropical Forest Soil	MKTYQEGSYAMAAVSAAVVAFRILIKKGLVTHDEAVRELLDEAVSRALFAEGQSIGAKSAETNRQSAEILKMIAQSL*
Ga0066388_1031829321	3300005332	Tropical Forest Soil	CDMKTSRTFQDGAYAMAALSAAVVAFRLLVKKGLLTREEAVRGLLDEAVQRAIFAESPNEPRSTAELNRQSAEILKFIAESL*
Ga0066388_1087168292	3300005332	Tropical Forest Soil	SAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGASPRSTAELNRQSAEILKFIAESL*
Ga0066686_101858491	3300005446	Soil	MKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGATPRSTAELNRQSAEILKFIAESL*
Ga0066681_107068502	3300005451	Soil	MKSYEEGAYSMAALSAAVVAFRLLLKKGLIARDETVRALLDEAVSRAIFAEAEAKGEATAEINRQSAEILKFVAEGL*
Ga0070663_1013728802	3300005455	Corn Rhizosphere	DMKSFQDGAYAMAALSATVVAFRLLLKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0068867_1023135722	3300005459	Miscanthus Rhizosphere	DSAEMKSFQDGAYAMAALSATVVAFRLLLKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0066905_1000535892	3300005713	Tropical Forest Soil	MAALSAAVVAFRLLVKKGLLTREEAVRGLLDEAVQRAIFAESPNEPRSTAELNRQSAEILKFIAESL*
Ga0066905_1003957542	3300005713	Tropical Forest Soil	MKSFQDGAYAMAALSASVVALRALVHKGVVAREELVRAILDEAVQRALFAESKLQGEAIEQNTAELNRQSAEILKFVAENL*
Ga0066903_1001855111	3300005764	Tropical Forest Soil	CDMKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRGLLDEAVQRAIFAEQVHEGATPRATAEVNRQSAEILKFIAESL*
Ga0066903_1005472323	3300005764	Tropical Forest Soil	MKTYEEGAYALAALSAAGVAFRLLLSKGLIGRDEAVRALLDEAVSRAIFAESEARGEAAEANRQSAEILKFMADGL*
Ga0066903_1009209373	3300005764	Tropical Forest Soil	MKTFQDAGYALAALSASAVAFRLLVNRGLVSREEAVRAILDEAVQRAIFAESKLQEQAIGHGTAEANRQSAEILKFIAESL*
Ga0066903_1024240223	3300005764	Tropical Forest Soil	FQDGAYAMAALSASAVTCRVLVDKGLVTREEVVRAILDEAVQRALFAESKLQEDAIGQHTAELNRQSAEILKFIAESL*
Ga0074472_108786665	3300005833	Sediment (Intertidal)	MKTYQDGAYAMAALSAAVVAFRILVKKGLVTRDEALRSLLDEAVQRAIFAESFNEGVTAHTTAELNRQSAEILKFIAESL*
Ga0074472_112826822	3300005833	Sediment (Intertidal)	MMARCDARAPRPERLRVGSRLPEGCDMKTYQDGAYAMAALSAAVVAFRILVKKGLVTREEAVRSLLDEAVQRAIFAESLPEEGKGRTTAELNRQSAEILKFIAESL*
Ga0075299_10010772	3300005883	Rice Paddy Soil	MKTFQDGAYAMAALSASVVAFRILVRKGLVTRDEAVRGLLDEAVQRAIFAESQHEETIGRTTAELNRQSAEILKFIAESL*
Ga0081455_100144903	3300005937	Tabebuia Heterophylla Rhizosphere	MKADMKTSRTFQDGAYAMAALSAAVVAFRLLVKKGLLTREEAVRGLLDEAVQRAIFAESPNEPRSTAELNRQAAEILKFIAESL*
Ga0066696_100275362	3300006032	Soil	MKSYEEGAYAMAALSAAVVAFRLLLKKGLIARDEAVRALLDEAVSRAIFAEAEAKGEATAEINRQSAEILKFVAEGL*
Ga0075365_102769251	3300006038	Populus Endosphere	MADDHETKNFHESAYAMAALSAAVVVYRLAIKKGLLTRDEAVRGLLDEAVSRAIFAEAKLQERVISETTADMNRQSAEILKFVAESL*
Ga0097621_1020160942	3300006237	Miscanthus Rhizosphere	ADMKSFQDGAYAMAALSATVVAFRLLLKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0079222_124324511	3300006755	Agricultural Soil	MNLPAHRLRQEDSEVKTFQDGAYAMAALSAAVVAFRILVKKGLLARDEAVRGLLDEAVQRAIFAESLHEAATPRSTAELNRQSAEILKFIAESL*
Ga0066658_104030012	3300006794	Soil	EGADMKSFQDGAYAMAALSATVVAFRLLVKKGLLAREEAVRSLLDEAVQRAIFAESLHEATSGRTTAELNRQSAEILKFIAESL*
Ga0066665_103097913	3300006796	Soil	AGRPRHESADMKSFQDGAYAMAALSATVVAFRLLVKKGLLAREEAVRSLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0066660_101023844	3300006800	Soil	MKSYEEGAYAMAALSAAVVAFRLLLKKGLIARDETVRALLDEAVSRAIFAEAEAKGEATAEINRQSAEILKFVAEGL*
Ga0075425_1003473893	3300006854	Populus Rhizosphere	MTNFKDGAYAMAALSASVVAFRVLVKKGLITREEAVRALLDEAVQRAIFAESKPDEIGKATAEFNRQSAEILKFIAESL*
Ga0066710_1009116161	3300009012	Grasslands Soil	MKTSRTFQDGAYAMASLSAAVVAFRLLVKKGLLTRDEAVRSLLDEAVQRAIFAESRDASGQTTAELNRQSAEILKFIAESL
Ga0099827_102333162	3300009090	Vadose Zone Soil	MKSFQDGAYAMAALSATVVVFRLLLKKGLLAREEAVRSLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0099827_110276852	3300009090	Vadose Zone Soil	MKTFQDAGYALAAVSASAVVFRIMVNKGLVTREEAVRAILDEAVQRAIFAESKLQEDAIGKGTAEANRQSAEILKFIAESL*
Ga0111539_123876972	3300009094	Populus Rhizosphere	MKSFQDGAYAMAALSATVVAFRLLMKKGLLSREEAVRNLLDEAVQRAIFAESHEATSGRSTAELNRQSAEILKFIAESL*
Ga0066709_1015508651	3300009137	Grasslands Soil	MKTSRTFQDGAYAMASLSAAVVAFRLLVKKGLLTRDEAVRSLLDEAVQRAIFAESRDASGQTTAELNRQSAEILKFIAESL*
Ga0099792_100003906	3300009143	Vadose Zone Soil	MPPNDQDSKLAAHVFFRRESRAMKVYQEGAYAMASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLGTKTAEMNRQSAEILKMIAQGL*
Ga0105242_104301692	3300009176	Miscanthus Rhizosphere	MKSFQDGAYAMAALSATVVAFRLLLKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSA
Ga0126374_106184152	3300009792	Tropical Forest Soil	MKSFQDGAYAMAALSATVVAFRLLVKKGLLPREEAVRSLLDEAVQRAIFAESLHEATNGRSTAELNRQSAEILKFIAESL*
Ga0105063_10195021	3300009804	Groundwater Sand	MKTFQDGAYAMAALSACVVAMRTLVQKGVASREEVVRAILDEAVQRAIFAEGRAPDTTVGQTAAEMNRQSAEILKMIAESL*
Ga0126380_100901112	3300010043	Tropical Forest Soil	MKSFQDGAYAMAALSATVVAFRLLVKKGLLPREEAVRGLLDEAVQRAIFAESLHEATSGRTTAELNRQSAEILKFIAESL*
Ga0126380_101968232	3300010043	Tropical Forest Soil	MKTFQDGAYAMAALSAAVVAFRLLVKKGLLTRDEAVRSLLDEAVQRAIFAESQGAIGHTTAELNRQSAEILKFIAESL*
Ga0126384_101512424	3300010046	Tropical Forest Soil	MKSFQDGAYAMAALSATVVAFRLLVKKGLLAREEAVRSLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0126384_110057122	3300010046	Tropical Forest Soil	REHGDREGSEMKSFQDGAYAMAALSASVVALRALVDKGVVAREELVRAILDEAVQRALFAESKLQGEAIEQNTSELNRQSAEILKFVAENL*
Ga0126384_118640482	3300010046	Tropical Forest Soil	MKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLSEGATPRSTAELNRQSAEILKFIAESL*
Ga0126382_100998072	3300010047	Tropical Forest Soil	MKTSRTFQDGAYAMAALSAAVVAFRLLVKKGLLTREEAVRGLLDEAVQRAIFAESPNEPRSTAELNRQSAEILKFIAESL*
Ga0126382_101780811	3300010047	Tropical Forest Soil	MKTFQDGAYAMAALSAAVVAFRILVKKGLLARDEAVRGLLDEAVQRAIFAESLREGATPRSTAELNRQSAEILKFIAESL*
Ga0126382_102035631	3300010047	Tropical Forest Soil	MKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGASPRSTAELNR
Ga0126382_104936771	3300010047	Tropical Forest Soil	MKTFLDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRGLLDEAVQRAIFAESLQEGATPHSTAELNRQSAEILKVIAESL*
Ga0126382_122120252	3300010047	Tropical Forest Soil	DMKTSRTFQDGAYAMAALSAAVVAFRLLVKKGLLTREEAVRGLLDEAVQRAIFAESPKEPRSTAELNRQSAEILKFIAESL*
Ga0126382_123795572	3300010047	Tropical Forest Soil	MAALSATVVAFRLLLKKGLLPREEAVRSLLDEAVQRAIFAESLHEATNGRSTAELNRQSAEILKFIAESL*
Ga0126370_105124481	3300010358	Tropical Forest Soil	MKTFQDGAYAMAALSAAVVAFRMLVKKGLLTRDEAVRSLLDEAVQRAIFAEQIHEGATPRASAEVNRQSAEILKFIAESL*
Ga0126370_105397682	3300010358	Tropical Forest Soil	MKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAEQVHEGATPRATAEVNRQSAEILKFIAESL*
Ga0126370_114890122	3300010358	Tropical Forest Soil	VLAEGFDMKTFQDGAYAMAALSASVVAFRVLVKKGLVTREEAVRALLDEAVQRAIFAEAKLQEESIGQNTAELNRQAAEILKFITESL*
Ga0126370_116856051	3300010358	Tropical Forest Soil	GRSRHDTADMKSFQDGAYAMAALSATVVAFRLLLKKGLLPREEAVRSLLDEAVQRAIFAESLHEATNGRSTAELNRQSAEILKFIAESL*
Ga0126376_102125904	3300010359	Tropical Forest Soil	CEMKSFQDGAYAMAALSASVVALRALVDKGVVPREELVRAILDEAVQRALFAESKLQGEAIEQNTAELNRQSAEILKFVAENL*
Ga0126376_106143783	3300010359	Tropical Forest Soil	ALSAAVVAFRLLVKKGLLTREEAVRGLLDEAVQRAIFAESPNEPRSTAELNRQSAEILKFIAESL*
Ga0126376_119562711	3300010359	Tropical Forest Soil	MTGLPAAPAVSGRRVLTEKVCEMKSFQDGAYAMAALSASAVACRVLVDKGLVTREEVVRAILDEAVQRALFAESKLQEDAIGQHTAELNRQSAEILKFIAESL*
Ga0126372_100208722	3300010360	Tropical Forest Soil	MKTFLDGAYAMAALSAAMVAFRILVKKGLLTRDEAVRGLLDEAVQRAIFAESLHEGATPHSTAELNRQSAEILKVIAESL*
Ga0126372_103536691	3300010360	Tropical Forest Soil	MKSFQDGAYAMAALSATVVAFRLLLRKGLLPREEAVRSLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKF
Ga0126372_113446551	3300010360	Tropical Forest Soil	MKTYEDSAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVARAIFAETGARGEMEAETNRQSAEILKFMAQDL*
Ga0126372_117421692	3300010360	Tropical Forest Soil	MKTYRESAYAMAALSAAVVAYRLLLKKGLIPRDEAVRALLDEAVSRAIFAEAEAVGDAVAEANRQSAEILKMIAEGL*
Ga0126372_131123182	3300010360	Tropical Forest Soil	AYAMAALSAAVVAFRILVKKCLVTRKAAVRALLDEAVQRAIFAEAKLQEEAIGQNTAELNRQSAEILKFIAESL*
Ga0126377_101822013	3300010362	Tropical Forest Soil	MKTSRTFQDGAYAMASLSAAVVAFRLLVKKGLLTRDEAVRSLLDEAVQRAIFAESQGAIGHTTAELNRQSAEILKFIAESL*
Ga0126377_102186454	3300010362	Tropical Forest Soil	AYAMAALSATVVAFRLLLKKGLLPREEAVRSLLDEAVQRAIFAESLHEATNGRSTAELNRQSAEILKFIAESL*
Ga0126377_102824342	3300010362	Tropical Forest Soil	MRTLEKTFDDGAYAMAALSACVVVFRMLVQKGLVNREEAVRALLDEAVQRAIFAEAKLQDQTIGHTTAELNRQSAEILKFIAESL*
Ga0126377_105621893	3300010362	Tropical Forest Soil	EMKSFQDGAYAMAALSASVVACRVLVDKGLVTREEVVRAILDEAVQRALFAESKLQEDAIGQHTAELNRQSAEILKFIAESL*
Ga0126377_111340842	3300010362	Tropical Forest Soil	FRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGASPRSTSELNRQSAEILKFIAESL
Ga0126377_125142341	3300010362	Tropical Forest Soil	MKTFQDGAYAMAAPSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAMFAESLHESASPRSTAELNRQSAEILKFIAESL*
Ga0126377_135677191	3300010362	Tropical Forest Soil	MKTSRTFQDGAYAMAALSAAVVAFRLLVKKGLLTRDEAVRGLLDEAVQRAIFAESPNEPRSTAEINRQSA
Ga0126379_104265642	3300010366	Tropical Forest Soil	MKSFQDGAYAMAALSASVVALRALVDKGVVAREELVRAILDEAVQRALFAESKLQGEAIEQNTAELNRQSAEILKFVAENL*
Ga0134124_100590813	3300010397	Terrestrial Soil	MKSFQDGAYAMAALSATVVAFRLLVKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0126383_101597334	3300010398	Tropical Forest Soil	DGAYAMAALSASVVALRVLVDKGVVPREELVRAILDEAVQRALFAESKLQGEAIEQNTAELNRQSAEILKFVAENL*
Ga0126383_133787491	3300010398	Tropical Forest Soil	MKTYEDSAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAEMNRQSAEILKFMAQDL*
Ga0134122_100625555	3300010400	Terrestrial Soil	MKSFQDGAYAMAALSATVVAFRLLLKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0134121_102186102	3300010401	Terrestrial Soil	MKSFQDGAYAMAALSATVVAFRLLLKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGR
Ga0134121_125711261	3300010401	Terrestrial Soil	AASLVRAAPDGRAMTNFKDGAYAMAALSASVVAFRVLVKKGLITREEAVRALLDEAVQRAIFAESKPDEIGKATAEFNRQSAEILKFFAESL*
Ga0134123_106408342	3300010403	Terrestrial Soil	GACAMAALSATVVAFRVPVKEVLLSRVGALRNLLDEAVQRAIFSESLHEATSGRSPA*
Ga0137381_104772421	3300012207	Vadose Zone Soil	KSFQDGAYAMAALSATVVVFRLLLKKGLLAREEAVRSLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0137377_109312191	3300012211	Vadose Zone Soil	SADMKSFQDGAYAMAALSATVVVFRLLLKKGLLAREEAVRSLLDEAVQRAIFAESLHEATSGRTTAELNRQSAEILKFIAESL*
Ga0137367_104764042	3300012353	Vadose Zone Soil	VLAKGLDMKTYQDGAYAMAALSASVVAFRVLVKKGLVTRDEAVRALLDEAVQRAIFAEAKLQEESIGQNTAELNRQSAEILKLIAESL*
Ga0137384_101592604	3300012357	Vadose Zone Soil	MKSFQDGAYAMAALSATVVVFRLLLKKGLLAREEAVRSLLDEAVQRAIFAESLHEATSGRTTAELNRQSAEILKFIAESL*
Ga0137384_105740401	3300012357	Vadose Zone Soil	MPPNDQDSKLAAHVIFRRESRAMKVYQEGAYAMASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLGTKTAEMNRQSAEILKMIAQGL*
Ga0137385_106663121	3300012359	Vadose Zone Soil	MASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLGTKTAEMNRQSAEILKMIAQGL*
Ga0137360_116698521	3300012361	Vadose Zone Soil	AYAMAALSATVVAFRLLLKKGLLTREEAVRGLLDEAVQRAIFAESLHEATSGRTTAELNRQSAEILKFIAESL*
Ga0137360_118824961	3300012361	Vadose Zone Soil	MPPNDQDSKLAAHVFFRRESRAMKVYQEGAYAMASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLGTKTAEMNRQSAEILKVIAQGL*
Ga0137373_102896471	3300012532	Vadose Zone Soil	AKGLDMKTYQDGAYAMAALSASVVAFRVLVKKGLVTRDEAVRALLDEAVQRAIFAEAKLQEESIGQNTAELNRQSAEILKLIAESL*
Ga0137398_106488092	3300012683	Vadose Zone Soil	RHETADTKSFHDGAYAMAALSATVVAFRLLLKKGLLTREEAVRNLLDEAVQRAIFAESLHEASSGRSTAELNRQSAEILKFIAESL*
Ga0137397_106671322	3300012685	Vadose Zone Soil	MPLGNRAMKIYQEGAYAMAALSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLPAKTAEMNRQSAEILKMIAQGL*
Ga0137413_102720112	3300012924	Vadose Zone Soil	MKNYQDGAYAMAALSAAVVAFRILVQKGLVTRDEAVRALLDEAVSRAIFAEAEAIGEATAEMNRQSAEILKFIAESL*
Ga0137419_111082261	3300012925	Vadose Zone Soil	AMAALSATVVAFRLLLKKGLLTREDAVRVLLDEAVQRAIFAESLHEASSGRSTAELNRQSAEILKFIAESL*
Ga0126375_100555102	3300012948	Tropical Forest Soil	MRTFQDGAYAMAALSAAVVAFRILVKKGLLARDEAVRGLLDEAVQRAIFAESLREGATPRSTAELNRQSAEILKFIAESL*
Ga0126375_102339522	3300012948	Tropical Forest Soil	MKTFQDGAYAMAALSAAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGASPRSTAEFNRQSAEILKFIAESL*
Ga0164303_106002221	3300012957	Soil	MKSFQDGAYAMAALSATVVAFRLLLKKGLLSREDAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQ
Ga0137420_11469361	3300015054	Vadose Zone Soil	MPPNDQDSKLAAHVFFRRESRAMKVYQEGAYAMASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSSLGTKTAEMNRQSAEILKMIAQGL*
Ga0137418_101514832	3300015241	Vadose Zone Soil	MKSFQDGAYAMAALSATVVVFRLLLKKGLLAREEAVRGLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0137409_106952022	3300015245	Vadose Zone Soil	MSSIGRAARPRHEGADMKSFQDGAYAMAALSATVVAFRLLMKKGLLTREETVRGLLDEAVQRAIFAESLHEATSGRTTAELNRQSAEILKFIAEGL*
Ga0134089_105362641	3300015358	Grasslands Soil	RHEGCDMKTFQDGAYAMAALSAAVVAFRVLVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGATPRSTAELNRQSAEILKFIAESL*
Ga0132258_125041672	3300015371	Arabidopsis Rhizosphere	MKSFQDGAYAMAALSATVVAFRLLLKKGLLSREEAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL*
Ga0182041_101710782	3300016294	Soil	MKTYEESAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAETNRQSAEILKFMAQDL
Ga0182040_118862791	3300016387	Soil	MKTYEESAHAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAEMNRQSAEILKFMAQDL
Ga0182740_10357751	3300017644	Soil	MKNYEDGAYAMAALSASLVAFRLLLSKGLVSRDEAVRALLDEAVSRAIFAEAKLQDRTISEATAEMNRQSAEILKMFADGL
Ga0184604_100361461	3300018000	Groundwater Sediment	MAALSATVVAFRLLMKKGLLAREEAVRGLLDEAVQRAIFAESHEATSGRSTAELNRQSAEILKFIAESL
Ga0184626_101254962	3300018053	Groundwater Sediment	VPEGCDMKTFQDGAYAMAALSAAVVAFRILVKKGLVTRDEAVRSLLDEAVQRAIFAESLNEGATPRSTAELNRQSAEILKFIAESL
Ga0184635_102592801	3300018072	Groundwater Sediment	VPEGCDMKTFQDGAYAMAALSAAVVAFRILVKKGLVTRDEAVRSLLDEAVQRAIFAESLNEGATPRSTAELNRQSADILKFIAESL
Ga0184609_100539613	3300018076	Groundwater Sediment	MAALSATVVAFRLLLKKGLLTREEAVRGLLDEAVQRAIFAESHEATSGRSTAELNRQSAEILKFIAESL
Ga0184612_101112212	3300018078	Groundwater Sediment	MKTFQDGAYAMAALSACVVAMRTLVQKGVASREEVVRAILDEAVQRAIFAEGRAPDTTVGQTAAEMNRQSAEILKMVAESL
Ga0184612_103887371	3300018078	Groundwater Sediment	MKTFQDGAYAMAALSAAVVAFRILVKKGLVTRDEAVRSLLDEAVQRAIFAESLNEGATPRSTAELNRQSAEILKFIAESL
Ga0066655_102211991	3300018431	Grasslands Soil	AAVVAFRILVKKGLLTRDEAVRSLLDEAVQRAIFAESLHEGATPRSTAELNRQSAEILKFIAESL
Ga0190274_119029381	3300018476	Soil	MAKEPHEMKNYHQDAYAMAALSAAVVVYRILVKKGLVSRDEAVRALLDEAVSRAIFAEAKLQERSITEATAEMNRQSAEILKFVAESL
Ga0066669_117958021	3300018482	Grasslands Soil	MKNYQDGAYAMAALSAAVVAFRILVQKGLVTRDEAVRALLDEAVSRAIFAEAEAISEATAEMNRQSAEILKFIAESL
Ga0179596_100055782	3300021086	Vadose Zone Soil	MKVYQEGAYAMASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLGTKTAEMNRQSAEILKMIAQGL
Ga0187846_100889262	3300021476	Biofilm	MKTYQDGAYAMAAFSAAVVAFRLLLEKGLIPRDEAVRALLDEAVSRAIFAEAQAKGEAAAEVNRQSAEILKFMAEELRPRA
Ga0222622_102392633	3300022756	Groundwater Sediment	MKSFQDGAYAMAALSATVVALRLLMKKGLLAREEAVRSLLDEAVQRAIFAESLPEATSGRTTAELNRQSAEILKFIAESL
Ga0208533_1000722	3300026006	Rice Paddy Soil	MKTFQDGAYAMAALSASVVAFRILVRKGLVTRDEAVRGLLDEAVQRAIFAESQHEETIGRTTAELNRQSAEILKFIAESL
Ga0209438_10542181	3300026285	Grasslands Soil	MAALSATVVAFRLLLKKGLLTREEAVRGLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL
Ga0179593_12538342	3300026555	Vadose Zone Soil	MAALSATVVAFRLLLKKGLLTREEAVRNLLDEAVQRAIFAESLHEASSGRSTAELNRQSAEILKFIAESL
Ga0208995_10934701	3300027388	Forest Soil	MASLSAAVVAFRILIKKGLITQEEAVRELLDEAVSRAIFAEGQSLGTKTAEMNRQSAEILKMIAQGL
Ga0209261_100525592	3300027735	Wetland Sediment	MKTYQDGAYAMAALSAAVVAFRILVKKGLVTRDEAVRSLLDEAVQRAIFAESFNEGVTAHTTAELNRQSAEILKFIAESL
Ga0209797_100393604	3300027831	Wetland Sediment	AAVVAFRILVKKGLVTRDEAVRSLLDEAVQRAIFAESFNEGVTAHTTAELNRQSAEILKFIAESL
Ga0209683_100017443	3300027840	Wetland Sediment	MKTYQDGAYAMAALSAAVVAFRILVKKGLVTRDEAVRSLLDEAVQRAIFAESLNEGVTAHTTAELNRQSAEILKFIAESL
Ga0209465_101323812	3300027874	Tropical Forest Soil	MKSFQDGAYAMAALSASVVALRVLVDKGVVPREELVRAILDEAVQRALFAESKLQGEAIEQNTAELNRQSAEILKFVAENL
Ga0307500_102438771	3300031198	Soil	GGRAKPRHDGADMKSFQDGAYAMAALSATVVAFRLLVKKGLLTREEAVRNLLDEAVQRAIFAESLHEATSGRSTAELNRQSAEILKFIAESL
Ga0318516_102755421	3300031543	Soil	MKTYEESAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGAKGEIEAEMNRQSAEILKFMAQDL
Ga0306917_101604051	3300031719	Soil	MKTYEESAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAEMNRQSAEILKFMAQDL
Ga0307469_122483711	3300031720	Hardwood Forest Soil	MKTSKTFQDGAYAMAALSAAVVAFRLLVKKGLLTREEAVRSLLDEAVQRAIFAESPNEPRSTAEINRQSAEILKFIAESL
Ga0302321_1029204932	3300031726	Fen	MKSYHEGAYAMAALAAAVVAFRVLIKKGLITQEEAVRELLDEAVSRAIFAEGQSLAANTAEMNRQSAEILKMLAQGL
Ga0307468_1013822812	3300031740	Hardwood Forest Soil	MKIYQEGAYAMASLSAAVVAFRILINKGLITHDEAVRELLDEAVSRALFAEDESLGAKTAEMNRQSAEILKMIAQGI
Ga0318521_104678172	3300031770	Soil	KTYEESAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAEMNRQSAEILKFMAQDL
Ga0306923_120112262	3300031910	Soil	MKTYEEGAYALAALSAAGVAFRLLLSKGLIGRDEAVRALLDEAVSRAIFAESEARGEAAEANRQSAEILKFMAEGL
Ga0310916_104917332	3300031942	Soil	MKTYEEGAYALAALSAAGVAFRLLLSKGLIGRDEAVRTLLDEAVSRAIFAESEARGEAAEANRQSAEILKFMAEGL
Ga0306922_123389671	3300032001	Soil	MKTYEESAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAETNRQS
Ga0318533_105184261	3300032059	Soil	MKTYKESAYAVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAEMNRQSAEILKFMAQDL
Ga0318540_106036771	3300032094	Soil	MKTYEESAYVVAALGAAGVAIRLLLSKGLVGRDEAVRALLDEAVSRAIFAETGARGEIEAEMNRQSAEILKFMAQDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053349

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences