Metagenome / Metatranscriptome Family F053426

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053426
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	85 residues
Representative Sequence	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRP
Number of Associated Samples	100
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.09 %
% of genes near scaffold ends (potentially truncated)	39.72 %
% of genes from short scaffolds (< 2000 bps)	83.69 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.191 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.149 % of family members)
Environment Ontology (ENVO)	Unclassified (31.915 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.901 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.43% Coil/Unstructured: 56.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.12.1: BAH domain	d3pt9a1	3pt9	0.66113
b.34.12.1: BAH domain	d3pt9a2	3pt9	0.62425
b.34.13.3: Chromo barrel domain	d1wgsa1	1wgs	0.62301
d.3.1.1: Papain-like	d1pcia_	1pci	0.62275
d.3.1.1: Papain-like	d3pdfa2	3pdf	0.61636

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00106	adh_short	6.38
PF11716	MDMPI_N	2.84
PF01872	RibD_C	2.84
PF05977	MFS_3	2.13
PF13354	Beta-lactamase2	2.13
PF13191	AAA_16	1.42
PF00149	Metallophos	1.42
PF13466	STAS_2	1.42
PF00392	GntR	1.42
PF01740	STAS	1.42
PF02839	CBM_5_12	1.42
PF00196	GerE	0.71
PF00583	Acetyltransf_1	0.71
PF00850	Hist_deacetyl	0.71
PF02754	CCG	0.71
PF01243	Putative_PNPOx	0.71
PF13305	TetR_C_33	0.71
PF02371	Transposase_20	0.71
PF00005	ABC_tran	0.71
PF13522	GATase_6	0.71
PF16542	PNKP_ligase	0.71
PF13671	AAA_33	0.71
PF01381	HTH_3	0.71
PF14216	DUF4326	0.71
PF01022	HTH_5	0.71
PF08352	oligo_HPY	0.71
PF13683	rve_3	0.71
PF07690	MFS_1	0.71
PF07885	Ion_trans_2	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.84
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.84
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	2.13
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.42
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.71
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.90 %
Unclassified	root	N/A	46.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.19 %
Unclassified	root	N/A	46.10 %
Viruses	superkingdom	All Organisms → Viruses	0.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.19 %
Unclassified	root	N/A	46.10 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.71 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.65 %
Unclassified	root	N/A	46.10 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.81 %
Unclassified	root	N/A	46.10 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.10 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.72 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.10 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	9.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.22 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.09 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.13 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.71 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.10 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	9.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.22 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.26 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.55 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	2.13 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.42 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.10 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	9.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.22 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.13 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.42 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.42 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.42 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.10 %
Candidatus Frankia alpina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	9.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.22 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.13 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.42 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	1.42 %
Streptomyces werraensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces werraensis	0.71 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.10 %
Candidatus Frankia alpina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	9.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.22 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.13 %
Actinomadura sp. J1-007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. J1-007	1.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.42 %
Streptomyces werraensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces werraensis	0.71 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.71 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.71 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001384\|JGI20190J14840_1014743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300001384\|JGI20190J14840_1021219	Not Available	545	Open in IMG/M
3300001418\|JGI20188J14859_1002068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. J1-007	2786	Open in IMG/M
3300001418\|JGI20188J14859_1004336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1936	Open in IMG/M
3300001418\|JGI20188J14859_1016239	Not Available	830	Open in IMG/M
3300001449\|JGI20208J14878_1024715	Not Available	625	Open in IMG/M
3300001452\|JGI20203J14952_1031961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	570	Open in IMG/M
3300001454\|JGI20204J15135_1010436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	876	Open in IMG/M
3300001471\|JGI12712J15308_10064379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	928	Open in IMG/M
3300002245\|JGIcombinedJ26739_100236450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	1717	Open in IMG/M
3300002245\|JGIcombinedJ26739_100718410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	878	Open in IMG/M
3300002245\|JGIcombinedJ26739_100810447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces werraensis	817	Open in IMG/M
3300002245\|JGIcombinedJ26739_101266911	Not Available	628	Open in IMG/M
3300002347\|JGIcombinedJ26865_1044627	Not Available	703	Open in IMG/M
3300005435\|Ga0070714_101181525	Not Available	746	Open in IMG/M
3300005436\|Ga0070713_100373571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1327	Open in IMG/M
3300005602\|Ga0070762_10635923	Not Available	711	Open in IMG/M
3300005602\|Ga0070762_10745681	Not Available	660	Open in IMG/M
3300005712\|Ga0070764_11009161	Not Available	525	Open in IMG/M
3300005921\|Ga0070766_10522199	Not Available	791	Open in IMG/M
3300005921\|Ga0070766_10538547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300005952\|Ga0080026_10039219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1214	Open in IMG/M
3300005994\|Ga0066789_10402652	Not Available	572	Open in IMG/M
3300005995\|Ga0066790_10313097	Not Available	670	Open in IMG/M
3300006028\|Ga0070717_10210855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1705	Open in IMG/M
3300006059\|Ga0075017_101389150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006175\|Ga0070712_101976031	Not Available	511	Open in IMG/M
3300006176\|Ga0070765_100026547	All Organisms → cellular organisms → Bacteria	4430	Open in IMG/M
3300006176\|Ga0070765_100145137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	2111	Open in IMG/M
3300006176\|Ga0070765_100833298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	872	Open in IMG/M
3300007265\|Ga0099794_10121955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1312	Open in IMG/M
3300007788\|Ga0099795_10495843	Not Available	569	Open in IMG/M
3300009090\|Ga0099827_10626084	Not Available	928	Open in IMG/M
3300009143\|Ga0099792_11260028	Not Available	503	Open in IMG/M
3300010159\|Ga0099796_10273926	Not Available	708	Open in IMG/M
3300010379\|Ga0136449_102836947	Not Available	683	Open in IMG/M
3300010867\|Ga0126347_1166003	Not Available	1180	Open in IMG/M
3300010867\|Ga0126347_1284254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1534	Open in IMG/M
3300010867\|Ga0126347_1555046	All Organisms → cellular organisms → Bacteria → Terrabacteria group	746	Open in IMG/M
3300010876\|Ga0126361_10354062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1153	Open in IMG/M
3300010877\|Ga0126356_10881142	Not Available	907	Open in IMG/M
3300010880\|Ga0126350_10735952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1147	Open in IMG/M
3300010880\|Ga0126350_11303689	Not Available	933	Open in IMG/M
3300010880\|Ga0126350_11813239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1697	Open in IMG/M
3300011271\|Ga0137393_11023351	Not Available	703	Open in IMG/M
3300012189\|Ga0137388_11841200	Not Available	536	Open in IMG/M
3300012207\|Ga0137381_10594558	Not Available	964	Open in IMG/M
3300012350\|Ga0137372_10370317	Not Available	1092	Open in IMG/M
3300012354\|Ga0137366_10255775	Not Available	1297	Open in IMG/M
3300012354\|Ga0137366_10576819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300012361\|Ga0137360_10315476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1301	Open in IMG/M
3300012363\|Ga0137390_10563773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1109	Open in IMG/M
3300012363\|Ga0137390_11331629	Not Available	664	Open in IMG/M
3300012532\|Ga0137373_10604979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300012683\|Ga0137398_11006971	Not Available	577	Open in IMG/M
3300012685\|Ga0137397_10579976	All Organisms → cellular organisms → Bacteria → Terrabacteria group	834	Open in IMG/M
3300012924\|Ga0137413_10211469	Not Available	1310	Open in IMG/M
3300012924\|Ga0137413_11555578	Not Available	539	Open in IMG/M
3300012925\|Ga0137419_10609403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	878	Open in IMG/M
3300012925\|Ga0137419_11551867	All Organisms → cellular organisms → Bacteria → Terrabacteria group	562	Open in IMG/M
3300014501\|Ga0182024_10237776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2454	Open in IMG/M
3300014501\|Ga0182024_11283891	Not Available	850	Open in IMG/M
3300014501\|Ga0182024_11642654	Not Available	726	Open in IMG/M
3300014501\|Ga0182024_12868867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	511	Open in IMG/M
3300015241\|Ga0137418_10735565	Not Available	750	Open in IMG/M
3300015245\|Ga0137409_11438067	Not Available	536	Open in IMG/M
3300018024\|Ga0187881_10405977	Not Available	558	Open in IMG/M
3300018043\|Ga0187887_10005576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	9171	Open in IMG/M
3300018060\|Ga0187765_10110193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1511	Open in IMG/M
3300019887\|Ga0193729_1099302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1110	Open in IMG/M
3300019890\|Ga0193728_1154371	Not Available	1007	Open in IMG/M
3300020583\|Ga0210401_10673090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300021086\|Ga0179596_10457723	All Organisms → cellular organisms → Bacteria → Terrabacteria group	646	Open in IMG/M
3300021180\|Ga0210396_11270543	Not Available	614	Open in IMG/M
3300021181\|Ga0210388_10389465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1225	Open in IMG/M
3300021401\|Ga0210393_10447998	Not Available	1054	Open in IMG/M
3300021401\|Ga0210393_11487540	Not Available	539	Open in IMG/M
3300021402\|Ga0210385_10049656	Not Available	2795	Open in IMG/M
3300021402\|Ga0210385_11465737	Not Available	522	Open in IMG/M
3300021403\|Ga0210397_10294712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1190	Open in IMG/M
3300021403\|Ga0210397_10942145	Not Available	669	Open in IMG/M
3300021406\|Ga0210386_11175781	Not Available	649	Open in IMG/M
3300021407\|Ga0210383_10325730	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300021407\|Ga0210383_10799961	Not Available	807	Open in IMG/M
3300021474\|Ga0210390_10141528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2024	Open in IMG/M
3300021474\|Ga0210390_11140452	Not Available	632	Open in IMG/M
3300021475\|Ga0210392_11510325	Not Available	502	Open in IMG/M
3300021477\|Ga0210398_10246531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300021478\|Ga0210402_10488968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1143	Open in IMG/M
3300024288\|Ga0179589_10341364	Not Available	679	Open in IMG/M
3300025464\|Ga0208076_1001223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3669	Open in IMG/M
3300025475\|Ga0208478_1077354	Not Available	599	Open in IMG/M
3300025504\|Ga0208356_1009759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2185	Open in IMG/M
3300025509\|Ga0208848_1003339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. J1-007	3163	Open in IMG/M
3300025574\|Ga0208717_1018639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1887	Open in IMG/M
3300025574\|Ga0208717_1025108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1563	Open in IMG/M
3300025588\|Ga0208586_1000622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12639	Open in IMG/M
3300025588\|Ga0208586_1033599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1196	Open in IMG/M
3300025625\|Ga0208219_1002077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7104	Open in IMG/M
3300025634\|Ga0208589_1004278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4899	Open in IMG/M
3300025854\|Ga0209176_10159597	Not Available	563	Open in IMG/M
3300025915\|Ga0207693_10747681	Not Available	755	Open in IMG/M
3300025922\|Ga0207646_10982181	Not Available	747	Open in IMG/M
3300026291\|Ga0209890_10183444	Not Available	679	Open in IMG/M
3300026294\|Ga0209839_10110387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	933	Open in IMG/M
3300026490\|Ga0257153_1020956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1338	Open in IMG/M
3300026557\|Ga0179587_10489303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	807	Open in IMG/M
3300027505\|Ga0209218_1133887	Not Available	523	Open in IMG/M
3300027855\|Ga0209693_10148937	Not Available	1156	Open in IMG/M
3300027884\|Ga0209275_10895376	Not Available	511	Open in IMG/M
3300027889\|Ga0209380_10473391	Not Available	732	Open in IMG/M
3300027903\|Ga0209488_10747494	Not Available	697	Open in IMG/M
3300027908\|Ga0209006_10007339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9963	Open in IMG/M
3300027908\|Ga0209006_10855344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300028666\|Ga0265336_10001176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12442	Open in IMG/M
3300028800\|Ga0265338_10000099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	159823	Open in IMG/M
3300031715\|Ga0307476_10180855	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300031715\|Ga0307476_10573170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300031715\|Ga0307476_10850291	Not Available	674	Open in IMG/M
3300031715\|Ga0307476_11060309	Not Available	596	Open in IMG/M
3300031718\|Ga0307474_10246764	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300032783\|Ga0335079_10000015	All Organisms → cellular organisms → Bacteria	231642	Open in IMG/M
3300032805\|Ga0335078_10139586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3444	Open in IMG/M
3300032805\|Ga0335078_10155154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3233	Open in IMG/M
3300032805\|Ga0335078_10946835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1027	Open in IMG/M
3300032828\|Ga0335080_10745848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1016	Open in IMG/M
3300032828\|Ga0335080_11487716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300032893\|Ga0335069_10160931	Not Available	2771	Open in IMG/M
3300032893\|Ga0335069_10940957	Not Available	963	Open in IMG/M
3300032893\|Ga0335069_11063495	Not Available	894	Open in IMG/M
3300032895\|Ga0335074_10437510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1394	Open in IMG/M
3300032895\|Ga0335074_10453295	Not Available	1358	Open in IMG/M
3300032895\|Ga0335074_11385078	Not Available	571	Open in IMG/M
3300032896\|Ga0335075_10127971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3236	Open in IMG/M
3300032898\|Ga0335072_10039824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6435	Open in IMG/M
3300032954\|Ga0335083_10454630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1081	Open in IMG/M
3300032955\|Ga0335076_10353059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1357	Open in IMG/M
3300033134\|Ga0335073_10099832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3755	Open in IMG/M
3300033134\|Ga0335073_10489142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1409	Open in IMG/M
3300033134\|Ga0335073_11634976	Not Available	612	Open in IMG/M
3300034124\|Ga0370483_0115186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	891	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.58%
Host-Associated	Host-Associated	1.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.45%
Aquatic	Environmental → Aquatic	2.13%
Plants	Host-Associated → Plants	1.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.45%
Freshwater	Environmental → Aquatic → Freshwater	1.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.42%
Sediment	Environmental → Aquatic → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.28%
Loam	Environmental → Terrestrial → Soil → Loam	17.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.15%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	14.18%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.67%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	5.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.71%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental	Open in IMG/M
3300001449	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20190J14840_10147431	3300001384	Arctic Peat Soil	MPADAVPGSTIPEDSEAEILLHDGTWVWAQVIGQRKDRRGRWCVGLRWYASPTVGGREGWYLYDPRLIRRPPLTPAARLRRRPAQI
JGI20190J14840_10212192	3300001384	Arctic Peat Soil	FGDPSREPRLERAMPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGHWCVGIRWYASPTVGGREGWYLYDPRLTAGRR*
JGI20188J14859_10020684	3300001418	Arctic Peat Soil	MAASDPAREPALERAMPADAVPGSTIPEDTEAEIQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPSFIRRPSLQPPRPGKPGGPGQR*
JGI20188J14859_10043364	3300001418	Arctic Peat Soil	MPADAVPGSTIPEDTEAELLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
JGI20188J14859_10162392	3300001418	Arctic Peat Soil	MAASDSAREPTLERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS*
JGI20208J14878_10247151	3300001449	Arctic Peat Soil	MPADAVPGSTIPEDSEAEILLHDGTWVWAQVIGQRKDRRGRWCVGLRWYASPTVGGREGWYLYDPRLIRRPPLT
JGI20203J14952_10319611	3300001452	Arctic Peat Soil	PALERAMPADAVPGSTIPEDTEAELLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
JGI20204J15135_10104363	3300001454	Arctic Peat Soil	MAASDPAREPALERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
JGI12712J15308_100643793	3300001471	Forest Soil	MAASDPAREPTLERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS*
JGIcombinedJ26739_1002364503	3300002245	Forest Soil	DAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPK*
JGIcombinedJ26739_1007184103	3300002245	Forest Soil	SPAMAPAGRFQIADDFTGTMTCVFADPSREPALERAMPADAVPGSTIPEDSEAEILLRDGTWAWAQVIGQRKDRHQRWCVGIRWYASPAVGGREGWYLYDPRLTAARR*
JGIcombinedJ26739_1008104473	3300002245	Forest Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPK*
JGIcombinedJ26739_1012669111	3300002245	Forest Soil	MAASDSAREPTLERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
JGIcombinedJ26865_10446272	3300002347	Arctic Peat Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDWHGRWCVGLRWYASPAVGGREGWYLYDP
Ga0070714_1011815252	3300005435	Agricultural Soil	MSVPDPSREPVLERAMPADAVPGSTIPEDIEAEILLQDGSWAWCRVIGQRKDRHGRWCVGIEYYSNATIGQSGGWHVLDPRLIRRPEGLSGGRCPSQGEVRL*
Ga0070713_1003735713	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTCVFADPSREPALERAMPADAVPGSTIPEDSEAEILLRDGTWAWAQVIGQRKDRHNRWCVGIRWYASPVVGGREGWYLFDPRLTAARR*
Ga0070762_106359231	3300005602	Soil	MPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS*
Ga0070762_107456812	3300005602	Soil	VAISDPSREPMLDRAMPADAVSGSTIPEDTEAEIQLRDGSWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWFMLDQRYIRRPNS*
Ga0070764_110091611	3300005712	Soil	MVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPPLAPAAASAAR
Ga0070766_105221992	3300005921	Soil	MLDRAMPADAVPGSTIPEDTEAEIQLRDGSWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRYIRRANPALRRGASGTGPGCAHLNQDR*
Ga0070766_105385472	3300005921	Soil	MPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWYASPTVGGREGWYLYDPRLI
Ga0080026_100392192	3300005952	Permafrost Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYYPWLIRRPHSA*
Ga0066789_104026521	3300005994	Soil	NLRAGAHPGQMVASDPAREPALERAMPADAVPGSTIPEDTEAEIQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPSFIRRPS*
Ga0066790_103130971	3300005995	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPWLIRRPHSA*
Ga0070717_102108555	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	STIPEDSEAEILLRDGTWVWAQVIGQRKDRHPVVRGNPLVASPVVGGREGWYLFDPRLTAARR*
Ga0075017_1013891501	3300006059	Watersheds	MPGDAVTGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGVRWYASPTVGGREGWYLYDPRLIRRPPLT
Ga0070712_1019760311	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SIGHWSLRTGAHPDQVVASDPTREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHSA*
Ga0070765_1000265473	3300006176	Soil	MTCVFADPSREPALERAMPADAVPGSTIPEDSEAEILLRDGTWAWAQVIGQRKDRHERWCVGIRWYASPAVGGREGWYLYDPRLSAARR*
Ga0070765_1001451372	3300006176	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLFDPRLIRRPHSA*
Ga0070765_1008332983	3300006176	Soil	MPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
Ga0099794_101219553	3300007265	Vadose Zone Soil	MVASDPAREPALERAMPADAVPASTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRP*
Ga0099795_104958432	3300007788	Vadose Zone Soil	MVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPVFIRRP*
Ga0099827_106260841	3300009090	Vadose Zone Soil	MVASDPAREPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRRDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRP*
Ga0099792_112600281	3300009143	Vadose Zone Soil	AMPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWFASPTVGGREGWYLYDPAFIRRPS*
Ga0099796_102739261	3300010159	Vadose Zone Soil	MVTSDPAREPALERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
Ga0136449_1028369471	3300010379	Peatlands Soil	MPADTVPGSTIPEDSDAEVQLRDGAWVLARVIGQRRDRHGRWCVGLRWYASSSIGGREGWFLIGLRYLRRPDS*
Ga0126347_11660032	3300010867	Boreal Forest Soil	MAASDPAREPALERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS*
Ga0126347_12842545	3300010867	Boreal Forest Soil	MPADAVPGSTIPEDTDAEIRLGDGSWVAARVIGQRKDRHGRWCIGLRWYASSAIGGREGWYLYDPDPEKIR
Ga0126347_15550462	3300010867	Boreal Forest Soil	MVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPVLIRRPK*
Ga0126361_103540622	3300010876	Boreal Forest Soil	MAASDPAREPALERAMPADAVPGSTIPEDSEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPP*
Ga0126356_108811422	3300010877	Boreal Forest Soil	AETHPGQMVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHSA*
Ga0126350_107359521	3300010880	Boreal Forest Soil	LERAMPADAVPGSTIPEDSEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPLEHLPVGPRR*
Ga0126350_113036891	3300010880	Boreal Forest Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPRPSAG*
Ga0126350_118132392	3300010880	Boreal Forest Soil	MAASDPAREPALERAMPADAVPGSTIPEDSEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS*
Ga0137393_110233512	3300011271	Vadose Zone Soil	MTCVFTDPSREPALERAMPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWFASPTVGGREGWYLYDPRL
Ga0137388_118412001	3300012189	Vadose Zone Soil	MTCVFADPSREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRP*
Ga0137381_105945582	3300012207	Vadose Zone Soil	MVASDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPALIRRPLMLRRAETEQC*
Ga0137372_103703172	3300012350	Vadose Zone Soil	MVASDPAREPTLERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPALIRRPLMLRRAETEQC*
Ga0137366_102557751	3300012354	Vadose Zone Soil	MVASDPAREPTLERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPALIRRPLMLR
Ga0137366_105768191	3300012354	Vadose Zone Soil	MTCVFADPSREPALERAMPADAVPGSTIPEDSEAEILLRDGSWVWAQVIGQRKDRRGRWCVGLRWYASPTVGGREGWYLYDPRLIRRPPLT
Ga0137360_103154761	3300012361	Vadose Zone Soil	MVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHSA*
Ga0137390_105637733	3300012363	Vadose Zone Soil	MVASDSAREPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRP*
Ga0137390_113316291	3300012363	Vadose Zone Soil	MTCVFADPSREPALERAMPADAVAGSTIPEDTEAEILLRDGTWVWAQVIGQRKDRHDRWCVGIRWYASPAVGGREGWYLYDPFLIRRPK*
Ga0137373_106049791	3300012532	Vadose Zone Soil	MTCVFADPSREPALERAMPADAVPGSTIPEDSEAEILLRDGSWVWAQVIGQRKDRRGRWCVGLRWYASPTVGGREGWYLYDPRLIRRPPLTRCAVSAVRRQR
Ga0137398_110069711	3300012683	Vadose Zone Soil	MAASDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
Ga0137397_105799761	3300012685	Vadose Zone Soil	MVASDSAREPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPVFIRRPNSPLSQ*
Ga0137413_102114694	3300012924	Vadose Zone Soil	VASDSAREPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPVFIRRP*
Ga0137413_115555782	3300012924	Vadose Zone Soil	MPADAVPGSTIPEDTEAEVLLRDGTWTWARVIGKRKDRHGRWCVGLRWYASPAVGGREGWFLLDTSKIRRPGLRAWLATSSLLRLVTQ*
Ga0137419_106094031	3300012925	Vadose Zone Soil	MVASDSAREPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPVFIRRP*
Ga0137419_115518672	3300012925	Vadose Zone Soil	MTCVFGDPSREPRLERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPNSPLLP*
Ga0182024_102377764	3300014501	Permafrost	MVASDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPALRPRSPGKPPGPVSG*
Ga0182024_112838912	3300014501	Permafrost	MPADAVPGSTIPEDTDAEVLLRDGSWVWCRVIGQRKDRHGRWCIGIRWYASSAVGGREGWYLQDPSAIRRPKDQLSVARPGR*
Ga0182024_116426541	3300014501	Permafrost	MVASDPAREPALERAMPADAVPGSTIPEDTEAEIQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPSFIRRPS*
Ga0182024_128688672	3300014501	Permafrost	KPGPVLTAADPSREPQLERAMPADAVPGSTRLEDSDAEVLLADGSWVLARVIGQRKDARGRWCVGIRWYASSAVGGREGWYLLDVAKIRRLED*
Ga0137418_107355651	3300015241	Vadose Zone Soil	MVASDSAREPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPNSPLLP*
Ga0137409_114380671	3300015245	Vadose Zone Soil	MVASDSAREPALERAMPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWYASPAVGGREGWYLYDPRLIRRPPLTPPAASAAGPA
Ga0187881_104059771	3300018024	Peatland	MPADAVPGSTIPEDTEAEIRLQDGTWTWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHSA
Ga0187887_100055767	3300018043	Peatland	MPADAVTGSTIPEDSEAEILLRDGTWVWAQVIGQRRDRHGRWCVGVRWYASPTVGGREGWYLYDPRLIRRPPLTLAAV
Ga0187765_101101932	3300018060	Tropical Peatland	MTAPDPSREPMLPRAMPADAVPGSTIPEDSEAEVLLQDGVWVWCQVIGQRKDRHGRWCIGLRWYASPSVGGREGWFLLDRRYIRRPALGRIVS
Ga0193729_10993023	3300019887	Soil	MPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS
Ga0193728_11543712	3300019890	Soil	MPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHNRWCVGIRWYASPAVGGREGWYLFNPRLIRRPNH
Ga0210401_106730901	3300020583	Soil	MPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWYASPTVGGREGWYL
Ga0179596_104577232	3300021086	Vadose Zone Soil	EPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPVFIRRPNSPLSQ
Ga0210396_112705431	3300021180	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRP
Ga0210388_103894653	3300021181	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPK
Ga0210393_104479981	3300021401	Soil	GSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS
Ga0210393_114875401	3300021401	Soil	MVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHSA
Ga0210385_100496562	3300021402	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLFDPRLIRRPHSA
Ga0210385_114657371	3300021402	Soil	MPAEAVPGSTIPVDTEAEIQLRDGTWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWFLLDSRYIRRPK
Ga0210397_102947122	3300021403	Soil	MPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWYASPTVGGREGWYLYDPR
Ga0210397_109421452	3300021403	Soil	NGHWSLRAQTHPGQMVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWTWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHSA
Ga0210386_111757811	3300021406	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHST
Ga0210383_103257302	3300021407	Soil	SREPVRDRAMPADAVPGSTIPEDTEAEIQLRDGTWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWFMLDQRYIRRPNS
Ga0210383_107999611	3300021407	Soil	TSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLFDPRLIRRPHSA
Ga0210390_101415281	3300021474	Soil	VAISDPSREPMLDRAMPADAVPGSTIPEDTEAEIQLRDGSWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRYIRRANPALRRGASGTGPGCAHLNQDR
Ga0210390_111404521	3300021474	Soil	MVTSDPAREPALERAMPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLFDPRLIRRPHSA
Ga0210392_115103251	3300021475	Soil	MPDDAVPGSTILEDTDALVRLQDGTWFFCRVIGQRKDRHGRWCVGIRWIASTLVGGREGWFLYDPAGIRRLED
Ga0210398_102465312	3300021477	Soil	VAISDPSREPMLDRAMPADAVSGSTIPEDTEAEIQLRDGSWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWFMLDQRYIRRPNS
Ga0210402_104889681	3300021478	Soil	MSVPDPCREPVLERAMPADAVPGSTIPEDTEAEILLQDGSWAWCRVIGQRKDRHGRWCVGIEYYPNATIGQSGGWYVLDPRLIRRPDGLSGGRSPSQGEVRL
Ga0179589_103413641	3300024288	Vadose Zone Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPNHPFLPSEHSTTGYRHER
Ga0208076_10012234	3300025464	Arctic Peat Soil	MPADAVPGSTIPEDTEAEVQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYACPAVGGREGWYLYDPSFIRRPCLPTPAAWGSRAVPVSG
Ga0208478_10773541	3300025475	Arctic Peat Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDWHGRWCVGLRWYASPAVGGREGWYLYDPALIRRPALPFRTLTWEAG
Ga0208356_10097594	3300025504	Arctic Peat Soil	MPVDAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS
Ga0208848_10033391	3300025509	Arctic Peat Soil	MAASDSAREPALERAMPADAVPGSTIPEDTEAEVQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPTVGGREGWYLYDPRLI
Ga0208717_10186394	3300025574	Arctic Peat Soil	MAASDPAREPALERAMPADAVPGSTIPEDTEAELLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS
Ga0208717_10251081	3300025574	Arctic Peat Soil	MPVDAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPP
Ga0208586_10006224	3300025588	Arctic Peat Soil	MAASDPAREPALERAMPADAVPGSTIPEDTEAEIQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPSFIRRPSLQPPRPGKPGGPGQR
Ga0208586_10335993	3300025588	Arctic Peat Soil	MPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLY
Ga0208219_10020773	3300025625	Arctic Peat Soil	MPADAVPGSTIPEDTEAELLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS
Ga0208589_10042786	3300025634	Arctic Peat Soil	MPADAVPGSTIPEDSEAEILLHDGTWVWAQVIGQRKDRRGRWCVGLRWYASPTVGGREGWYLYDPRLIR
Ga0209176_101595972	3300025854	Arctic Peat Soil	MPADAVPGSTIPEDSEAEILLHDGTWVWAQVIGQRKDRRGRWCVGLRWYASPTVGGREGWYLYNSQLIRRPPLTPAAHGGAGVP
Ga0207693_107476812	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPADAVPGSTIPEDTEAEVLLQDGTWAWAQVIGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHGPLVRQMAPGPQCGP
Ga0207646_109821812	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVIGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHGPLVRQMAPGPQCGPRPGAEEP
Ga0209890_101834441	3300026291	Soil	MVASDPAREPALERAMPADAVPGSTIPEDTEAEIQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPSFIRRPS
Ga0209839_101103871	3300026294	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPWLIRRPHSA
Ga0257153_10209561	3300026490	Soil	MPADAVPGSTIPEDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPHSA
Ga0179587_104893031	3300026557	Vadose Zone Soil	MVASDSAREPALERAMPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGW
Ga0209218_11338871	3300027505	Forest Soil	MPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAF
Ga0209693_101489372	3300027855	Soil	MAASDPAREPALERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS
Ga0209275_108953761	3300027884	Soil	MPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYNPAFIRRPS
Ga0209380_104733912	3300027889	Soil	MLDRAMPADAVPGSTIPEDTEAEIQLRDGSWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRYIRRANPALRRGASGTGPGCAHLNQDR
Ga0209488_107474942	3300027903	Vadose Zone Soil	MPADAVPGSTIREDTEAEILLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPVFIRRP
Ga0209006_100073391	3300027908	Forest Soil	SAREPTLERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS
Ga0209006_108553441	3300027908	Forest Soil	MPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWYASPTVGGREGWYLYDPRLIRRPPLAPA
Ga0265336_1000117620	3300028666	Rhizosphere	MPADAVPGSTVPEDTQAEVLMSDGTWDVVRVMGQRRDRHGRWCIGLRWFAGPAAGGREGWFLLDRGRIRRPGRAG
Ga0265338_10000099138	3300028800	Rhizosphere	MPADAVPGSTVPEDTEAEVLMSDGTWDVVRVMGQRRDRHGRWCIGLRWFAGPAAGGREGWFLLDRGRIRRPRSSRLSGPAREAPLRHGRAGSPFTW
Ga0307476_101808551	3300031715	Hardwood Forest Soil	MHVSDPRREPMLERAMPADAVPGSTVPERTEAQAQLRDGSWVWCEVMGQRKDRQGRWCVGIRWYAPPSVGGREGWYVMDRSRIRRFSLTSGQRRCRRGSG
Ga0307476_105731701	3300031715	Hardwood Forest Soil	MPADAVPGSTIPEDTEAEIQLRDGTWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDNRHIRRPNPALSRQLATAAGGGP
Ga0307476_108502911	3300031715	Hardwood Forest Soil	MHVSDSGRKPMLERAMPTDAVPGSTIPERTEAQVQLRDGSWVGREVIGQRKDRQGRWCVGIRWYASPLVGGREGWYVLDRSRIRRFSTLTSGRLRPCGTGHA
Ga0307476_110603092	3300031715	Hardwood Forest Soil	MPADAVPGSTIPEDSEAEILLRDGTWVWAQVIGQRKDRHGRWCVGIRWYASPTVGGREGWYLYDPRLIRRPPLTPAAASAAR
Ga0307474_102467642	3300031718	Hardwood Forest Soil	MPADAVPGSTIPEDTEAEIQLRDGTWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRYIHRPLWAEEAE
Ga0335079_10000015108	3300032783	Soil	VATSDPSREPMLDRAMPADAVPGSTIPEDTEAEIQLHDGSWVWAQVIGQRRDRHGRWCIGLRWYASPSVGGREGWYRLDRRFIRRPKGHLLPQMRHPAGCTSPC
Ga0335078_101395861	3300032805	Soil	MVASDPAREPVLERAMPADAVPGSTIPEDTEAEVLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPRLIRRPNGPLRLSSPW
Ga0335078_101551543	3300032805	Soil	MTCVFADPDREPALDRAMPADAVAGSMIAEDTEAEVLLRDGTWVWAQVIGQRKDRHGRWCVGLRWYASPAVGGREGWYRYDPRFIRRPAGPLLHLCG
Ga0335078_109468352	3300032805	Soil	MPADAVAGSMIAEDTEAEVLLRDGTWVWAQVIGQRKDRHGRWCVGLRWYASPAVGGREGWYRYDPRFIRRPAGPLLQLC
Ga0335080_107458482	3300032828	Soil	MTCVFADPDREPALDRAMPADAVAGSMIAEDTEAEVLLRDGTWVWAQVIGQRKDRHGRWCVGLRWYASPAVGGREGWYRYDPRFIRRPAGPLLQLC
Ga0335080_114877162	3300032828	Soil	MTCVFADPDREPALDRAMPADAVAGSMIAEDTEAEVLLRDGTWVWAQVIGQRKDRHGRWCVGLRWYASPAVGGREGWYRYDP
Ga0335069_101609312	3300032893	Soil	MRVPDPSREPMLDRAMPVDAVPGSTIPEDSEAEVLLQDGVWVWCQVIGQRKDRHGRWCIGLRWYASPSVGGREGWFLLDKRCIRRPK
Ga0335069_109409572	3300032893	Soil	MQPHNQGREPALERALPADAVPGSTIPEDTDAEILLRDGTWTWAHVIGQRKDRHGRWCVGLRWYASPSIGGREGWYLLGDASKLRRLDT
Ga0335069_110634953	3300032893	Soil	MLDRAMPADAVPGSTIPEDTEAEIQLRDGAWVWAQVIGQRKDRNGRWCVGLRWYASPSVGGREGWYLLDNRYIR
Ga0335074_104375103	3300032895	Soil	VAISDPSREPMLDRAMPADAVPGSTIPEDTEAEIQLRDGTWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWFILDQRYIRRPKQELWRR
Ga0335074_104532951	3300032895	Soil	QKQLRNKRSTWGCARPARGHPGQVAISDPSREPMLDRAMPADAVPGSTIPEDTEAEIQLRDGTWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRYIHRPNCQLLRQV
Ga0335074_113850781	3300032895	Soil	VAISDPSREPMLDRAMPADAVSGSTIPEDTEAEIQLRDGTWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWFILDQRYIRRPKQELWRR
Ga0335075_101279715	3300032896	Soil	VAISDPSREPMLDRAMPADAVPGSTIPEDTEAEIQLRDGTWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRYIHRPNCQLLRQV
Ga0335072_100398246	3300032898	Soil	VAISDPSREPMLDRAMPADAVPGSTIPEDTEAEIQLRDGTWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRYIHRPNCQLFASGLASR
Ga0335083_104546303	3300032954	Soil	MPADAIPGSTIPEDTEAEIQLRDGTWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYVLDNRHIRRPNPA
Ga0335076_103530592	3300032955	Soil	MPADAVAGSMIAEDTEAEVLLRVGTWVWAQVIGQRKDRHGRWCVGLRWYASPAVGGREGWYRYDPRFIRRPAGPLLQLCG
Ga0335073_100998324	3300033134	Soil	MLKRAMPADALPGSTIPERTEAQIQLQDGSWIWCEVIGQRKDRQGRWCVGIRWYASPSVGGREGWYVLDRSRIRRLSTLTSGQPRPSGHIHACLPLWPLDALE
Ga0335073_104891421	3300033134	Soil	VAISDPSREPMLDRAMPADAVPGSTIPEDTEAEIQLRDGSWVWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDQRYIRRPNPA
Ga0335073_116349762	3300033134	Soil	MPADAVPGSTIPEDTEAEIQLRDGTWAWAQVIGQRKDRQGRWCVGLRWYASPSVGGREGWYLLDSRY
Ga0370483_0115186_493_756	3300034124	Untreated Peat Soil	MVASDPAREPALERAMPADAVPGSTIPEDTEAEIQLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPSFIRRPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053426

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences