Sample 3300001452

3300001452: Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012

Overview

Basic Information
IMG/M Taxon OID	3300001452 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0084162 \| Gp0056282 \| Ga0003489
Sample Name	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	95606249
Sequencing Scaffolds	72
Novel Protein Genes	75
Associated Families	75

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3
All Organisms → cellular organisms → Bacteria	15
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. UNC401CLCol	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
Not Available	19
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	polar biome → polar → peat soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Barrow Environmental Observatory site, Barrow, Alaska
Coordinates	Lat. (^o)	71.2999	Long. (^o)	-156.61	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000171	Metagenome / Metatranscriptome	1783	Y
F000197	Metagenome / Metatranscriptome	1652	Y
F001398	Metagenome / Metatranscriptome	705	Y
F001849	Metagenome / Metatranscriptome	626	Y
F002516	Metagenome / Metatranscriptome	552	Y
F003524	Metagenome / Metatranscriptome	481	Y
F003567	Metagenome / Metatranscriptome	479	Y
F004030	Metagenome / Metatranscriptome	456	Y
F004056	Metagenome / Metatranscriptome	455	Y
F004238	Metagenome / Metatranscriptome	447	Y
F004423	Metagenome / Metatranscriptome	439	Y
F005462	Metagenome / Metatranscriptome	400	Y
F006747	Metagenome / Metatranscriptome	365	Y
F007045	Metagenome / Metatranscriptome	359	Y
F008007	Metagenome / Metatranscriptome	341	Y
F009153	Metagenome / Metatranscriptome	322	Y
F009475	Metagenome / Metatranscriptome	317	Y
F011009	Metagenome / Metatranscriptome	296	Y
F011716	Metagenome / Metatranscriptome	288	Y
F014045	Metagenome / Metatranscriptome	266	Y
F015000	Metagenome / Metatranscriptome	258	Y
F016223	Metagenome / Metatranscriptome	249	Y
F017178	Metagenome / Metatranscriptome	242	Y
F017543	Metagenome / Metatranscriptome	240	Y
F017820	Metagenome	238	Y
F018562	Metagenome / Metatranscriptome	234	Y
F018772	Metagenome / Metatranscriptome	233	Y
F019062	Metagenome / Metatranscriptome	232	Y
F020214	Metagenome / Metatranscriptome	225	Y
F020401	Metagenome / Metatranscriptome	224	Y
F021847	Metagenome / Metatranscriptome	217	Y
F022249	Metagenome / Metatranscriptome	215	Y
F025127	Metagenome / Metatranscriptome	203	N
F027912	Metagenome / Metatranscriptome	193	Y
F028967	Metagenome / Metatranscriptome	190	Y
F030598	Metagenome	185	Y
F031189	Metagenome / Metatranscriptome	183	Y
F031988	Metagenome / Metatranscriptome	181	Y
F033125	Metagenome / Metatranscriptome	178	Y
F035928	Metagenome / Metatranscriptome	171	Y
F036796	Metagenome / Metatranscriptome	169	Y
F038474	Metagenome / Metatranscriptome	166	Y
F047183	Metagenome / Metatranscriptome	150	Y
F049812	Metagenome / Metatranscriptome	146	Y
F052253	Metagenome / Metatranscriptome	143	Y
F053426	Metagenome / Metatranscriptome	141	Y
F055088	Metagenome / Metatranscriptome	139	Y
F057542	Metagenome / Metatranscriptome	136	Y
F062959	Metagenome / Metatranscriptome	130	Y
F063634	Metagenome / Metatranscriptome	129	Y
F064196	Metagenome	129	Y
F069266	Metagenome / Metatranscriptome	124	Y
F069412	Metagenome / Metatranscriptome	124	Y
F072368	Metagenome / Metatranscriptome	121	Y
F072837	Metagenome	121	N
F074175	Metagenome / Metatranscriptome	120	Y
F075353	Metagenome / Metatranscriptome	119	Y
F076588	Metagenome / Metatranscriptome	118	Y
F077974	Metagenome	117	Y
F078948	Metagenome / Metatranscriptome	116	Y
F082975	Metagenome / Metatranscriptome	113	N
F084160	Metagenome / Metatranscriptome	112	Y
F085624	Metagenome / Metatranscriptome	111	Y
F087560	Metagenome / Metatranscriptome	110	Y
F090991	Metagenome / Metatranscriptome	108	Y
F094572	Metagenome / Metatranscriptome	106	Y
F095392	Metagenome / Metatranscriptome	105	N
F095818	Metagenome / Metatranscriptome	105	Y
F096194	Metagenome / Metatranscriptome	105	N
F096195	Metagenome / Metatranscriptome	105	Y
F097226	Metagenome / Metatranscriptome	104	Y
F097730	Metagenome / Metatranscriptome	104	Y
F099809	Metagenome / Metatranscriptome	103	Y
F102047	Metagenome / Metatranscriptome	102	Y
F103698	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
JGI20203J14952_1000450	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4870	Open in IMG/M
JGI20203J14952_1000451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4862	Open in IMG/M
JGI20203J14952_1001059	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
JGI20203J14952_1001167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2716	Open in IMG/M
JGI20203J14952_1001417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. UNC401CLCol	2513	Open in IMG/M
JGI20203J14952_1001748	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
JGI20203J14952_1001952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2174	Open in IMG/M
JGI20203J14952_1002530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1951	Open in IMG/M
JGI20203J14952_1002619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1923	Open in IMG/M
JGI20203J14952_1002863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1858	Open in IMG/M
JGI20203J14952_1003198	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
JGI20203J14952_1003341	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
JGI20203J14952_1003406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1733	Open in IMG/M
JGI20203J14952_1003761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1658	Open in IMG/M
JGI20203J14952_1004208	All Organisms → cellular organisms → Bacteria → Proteobacteria	1576	Open in IMG/M
JGI20203J14952_1004874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1481	Open in IMG/M
JGI20203J14952_1005323	Not Available	1425	Open in IMG/M
JGI20203J14952_1005947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
JGI20203J14952_1006099	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
JGI20203J14952_1006835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
JGI20203J14952_1007749	Not Available	1200	Open in IMG/M
JGI20203J14952_1010511	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
JGI20203J14952_1011489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
JGI20203J14952_1011709	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
JGI20203J14952_1011962	Not Available	964	Open in IMG/M
JGI20203J14952_1012168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	955	Open in IMG/M
JGI20203J14952_1012254	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
JGI20203J14952_1012849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
JGI20203J14952_1013670	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
JGI20203J14952_1014679	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
JGI20203J14952_1015001	Not Available	853	Open in IMG/M
JGI20203J14952_1015043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	851	Open in IMG/M
JGI20203J14952_1015092	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
JGI20203J14952_1015104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
JGI20203J14952_1015117	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Mamiellaceae → Micromonas → Micromonas pusilla	848	Open in IMG/M
JGI20203J14952_1016521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
JGI20203J14952_1017051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	797	Open in IMG/M
JGI20203J14952_1017192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum	794	Open in IMG/M
JGI20203J14952_1017481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
JGI20203J14952_1017677	Not Available	782	Open in IMG/M
JGI20203J14952_1018132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	772	Open in IMG/M
JGI20203J14952_1018431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
JGI20203J14952_1021701	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
JGI20203J14952_1021729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
JGI20203J14952_1022826	Not Available	681	Open in IMG/M
JGI20203J14952_1023234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
JGI20203J14952_1023715	Not Available	667	Open in IMG/M
JGI20203J14952_1024046	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
JGI20203J14952_1025165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
JGI20203J14952_1026489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
JGI20203J14952_1026522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	628	Open in IMG/M
JGI20203J14952_1026949	Not Available	622	Open in IMG/M
JGI20203J14952_1027096	Not Available	621	Open in IMG/M
JGI20203J14952_1027145	Not Available	620	Open in IMG/M
JGI20203J14952_1027550	Not Available	615	Open in IMG/M
JGI20203J14952_1027936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
JGI20203J14952_1028067	Not Available	610	Open in IMG/M
JGI20203J14952_1029308	Not Available	596	Open in IMG/M
JGI20203J14952_1030699	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
JGI20203J14952_1031584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	573	Open in IMG/M
JGI20203J14952_1031644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	573	Open in IMG/M
JGI20203J14952_1031961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	570	Open in IMG/M
JGI20203J14952_1032072	Not Available	569	Open in IMG/M
JGI20203J14952_1032401	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
JGI20203J14952_1034586	Not Available	547	Open in IMG/M
JGI20203J14952_1035751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
JGI20203J14952_1036713	Not Available	531	Open in IMG/M
JGI20203J14952_1040294	Not Available	507	Open in IMG/M
JGI20203J14952_1040493	Not Available	505	Open in IMG/M
JGI20203J14952_1040622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
JGI20203J14952_1041003	Not Available	502	Open in IMG/M
JGI20203J14952_1041186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
JGI20203J14952_1000450	JGI20203J14952_10004504	F004238	MTIQIPDDLVHGLQGIAAARHKSVEQIAVESLRSLFDTASSPDAVFRAVRQLPHPSAAAVDDLEVAIASARLPVCDQDIFGSRRPG*
JGI20203J14952_1000451	JGI20203J14952_10004511	F011716	MDIAGMWRSMRADPAEAPHPGAHQQVAGEGITIAVTQQCQATLPLAGFTADEVTVTVTSHRPGVAAQVSIGANLNSPDGSYQGPTTTVGHGQFTAAARSRVRAGFAVLPSGWPVLGVGAEAIWEDGAPHSIALVYEQLACDPWVWWRWPIRILDLLTRPFLDGISSMPPRSSKG*
JGI20203J14952_1001059	JGI20203J14952_10010591	F082975	MGLTWRDAVSSCVIVVIVITYAVYLGGTSLLLISSAWATSAVVLVLGIGCAVVASGDLYTRPQPRMGQVFRWIATGFGTIAVIAGLIGLITGSAHALEILVVVTITWLATGIFWHVLTIGSDRSDEPS*
JGI20203J14952_1001167	JGI20203J14952_10011673	F103698	MNDFELESKLKTVPVLERPENYWEDFPARVRVQLHRIAPQADLAEYGLPQFAWRLGASFACLAVGLLVLGRPLQAASNAIFKNERTIRQQLAELPHHLRVLMADEHGLHYLVAEKQ*
JGI20203J14952_1001417	JGI20203J14952_10014174	F035928	VGSDREERNRVLGMPQGPRPGGPHARQGEEQQHVLGVPVDWFGPVDSDWLRSLAHPIRGYQRWARRRRLGIYAVDEDEPKSKR*
JGI20203J14952_1001748	JGI20203J14952_10017484	F006747	MSNAVLTSAKPPGNWTQLNKQLTQAKTLLRQMSQTVEDIEDARTIERAKRANAGKARIPWAQAKKELQLD*
JGI20203J14952_1001952	JGI20203J14952_10019522	F004056	VTELASTMTPGEVASRAAHAIAVLNELTHGGGELSTPGDVRDIVASLELIGSSLPQLCEQLARFLVVQHEDGQLTPEEGLDADDCVTEVIEALAAAGQAADMMTAALTEARAGSQVLAPAQRRTR*
JGI20203J14952_1002530	JGI20203J14952_10025303	F074175	VDEARSDSVAAQLRAAFPEGAFTQVNVLGYGDDPDVEPGETAIRAFVDRDGRPAETFEDDEAVIQAFSEAHQRAITSLHRDGQLPSIAWIQLIPDTPDRRAPGAELWGFPSMFFGMRSDATAEGPGFASVHTRLGPADLATVDAVINAGIASSRAEVMRWVIGRIREDPAYAQIQERDIGPEN*
JGI20203J14952_1002619	JGI20203J14952_10026191	F022249	MLKRNGEDCEHPVPNYPGLLTTSEYKAYNVAVPLVAVEVQMFNERTNTLSGIDNQSAQIAEQVAAQSTHGLQSLTVKGTPESAWQIRQTLFKSSRSEMLLCSRDVEEKKQFAIVEKFDPRSQYARIHGETDLHMIGTNAFALLQSFVESERAVLQLFRKDIEATVEESLSEKFPNQNHSRVVRAISARCGNQAAVESEKEKPAKNIKIRM*
JGI20203J14952_1002863	JGI20203J14952_10028632	F028967	VVESAAFGIGYTAVLIWAGTALVASFTGGEASPYWPAIPGLRTDTTGALAFGLAIVGLVLSKYLQLERRNGPPARPAPRPAGVNLVQAVAESAVFLSTGVVIYLSLNAVTHPFTLRLQLTHLLPWPSEGTVRVIALAVCLAAVAVTRYLRATAGPPGQPAAVPENTDVAA*
JGI20203J14952_1003198	JGI20203J14952_10031983	F030598	MNLDEKYRAWKERPTPLNVPPDFSADVMRRVHREARQRQARWNWPGVLEFFQRNVSFQYAALAVAATAGLSRLWLIFFAILQP*
JGI20203J14952_1003341	JGI20203J14952_10033413	F097226	MTLCNYIPFETPTIDPMYPYLDDLFDLDVLCTEEGIFINVISE*
JGI20203J14952_1003406	JGI20203J14952_10034061	F076588	VSGIVLLVLIGVVAAWLFTGGRKKLKLPTNGKHWIWVIIIVFVLLALLYGAHNSPHTNVTH*
JGI20203J14952_1003761	JGI20203J14952_10037612	F004423	MESLSGLRERRAFDCRLTPDRALGSLDEAEGFLRERALLTRTPDCALPSLYEACHEPPYRPGTAGFGA
JGI20203J14952_1004208	JGI20203J14952_10042083	F077974	MKPNDMPLVCLPLGLCDADVATLLDFLYDLTEALERHYTAELIRRNYPRQDNSTEARPDTNLADPPF*
JGI20203J14952_1004874	JGI20203J14952_10048742	F096195	MNEAGISVHTFRAYRDQYNFVPTVWPAKESVPDARVTLSIRPVPADLLAGRLDAQLKGFIASAPPGVKLSAWHEASNLPGYPDYVDAGSMSAVHEYMQELCRGSNVRYGSIICAVPSATKAWMGTNLDWYGLDIYDFGEGQFRNWRDGGISRTKLFDRLDDMLDTCRELTGRDSPEIDICETNSPRPRYRADWFALLAEWLYSNGGRCLQIFWNPSGPLSGPWLPDDQKTIRMLRSISSTYGE*
JGI20203J14952_1005323	JGI20203J14952_10053233	F078948	MVKFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGID*
JGI20203J14952_1005947	JGI20203J14952_10059472	F018562	RQRAEEIRRAPQEHKVRLVVSDQVRGSSILDKIADAVNGFCGSMWVFIAITVSIVAWLFLGNIVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQTASDKRAIADHETLIALHEMGKQQLAILNQQDDVLAILDTFASKDMPGRQAQIQDTVNKILAAVAGPATA*
JGI20203J14952_1006099	JGI20203J14952_10060993	F021847	LTAVRDELVAALEETLELARRLAADARDDEVPVTELVAQASMLGRLDERRQNLIGQLRREASAGVRAARPGLPVRAVVLAALDELGWPQNARFL
JGI20203J14952_1006835	JGI20203J14952_10068354	F008007	QKVLERAARSGMSPDELLDQAFAVIDEQHSNGEWMLAERETVATHIAEGFAQAERGELLDADQAARILRERRAKRLIG*
JGI20203J14952_1007749	JGI20203J14952_10077492	F038474	VSTYTQPCEYQECNCTVTGGLEGAAYCSEICESRDSTDEENETTCACGHPPCDTE*
JGI20203J14952_1007894	JGI20203J14952_10078942	F002516	VARARSVGGYAIPGIVVFFFWLVVAILAIILLAFIVHWAGGGELNLRLGHFILNVGFT*
JGI20203J14952_1010511	JGI20203J14952_10105111	F009153	VSTRGGSSPDPNARSPLAPGTAVDVRNRYQGTWVRGFEVAEFTDGGYRIRRLSDGSILGDLFTRDDVRRERSRQGFWWH*
JGI20203J14952_1010975	JGI20203J14952_10109751	F000197	VGVTGMANLAVKVADLEAASSWYTAAGATVTEPVAWENGRRADVTLGWLHLTLFTKAIYEDACELPEEGFLHPALFVDDLDAELARHTVLWGPRVVSGSFGVRRIAFVEAPGGIRLEFMEQVEEPEVPA*
JGI20203J14952_1011489	JGI20203J14952_10114891	F017178	ARLCTDVFDFGDAAEAFRAVDQGKPGLMHAVLNYDRSAAGDL*
JGI20203J14952_1011709	JGI20203J14952_10117093	F064196	MTAWEYGYIYVVHTVGPAPAVCIVVDKSDARVLEGCHGLLRAANVLGAVGWIVSSHGEKTACTPGINNLVSPIEGAVKGDSMMCYFMRRPAG*
JGI20203J14952_1011962	JGI20203J14952_10119621	F095818	GEPLDDLLRRRFATFRTIYLPTAGRLAEHGFELLPTAQRPHFTVRLRRADDQELVHLLEALGAAQPNPAYPGSAA*
JGI20203J14952_1012168	JGI20203J14952_10121683	F069412	METIIGFIAGYLTGVSQGRAGMERARTSLDEIRKSPEVRRMVADGVGLAQVVLGRVAKGGLSGAIGGV
JGI20203J14952_1012254	JGI20203J14952_10122542	F020214	MKLRKSLALVAVCAPMLLWAHAAGGPFDGTWTTNISCDASERMPAYTWTFVSTIANGTFHGQHGEEGGPGYLVIDGTIGADGSAKLHAKGTVSKGKGGLITQMKGNKYDYYVDAKFIDASGTGKREEGAGILGRPCSFEFTKQTD
JGI20203J14952_1012849	JGI20203J14952_10128491	F005462	GQTLYVPGQFKMPGQAIGSDSPPTSEGVFNNNQTYTGCAVDKAGNVFGNDIATAQGQYPPPSSGRLVEWFAPNYTTACIVYGPTSGGVGPHHTDGTGGLAQPGTMALADNGDLLVPNVGTSSVLRFSHSSMPTSASECPGGIYARSKVHVSAFAQGLSFPAGIAKDPSCGCFAISSYIGSPGIKWVTSNGQPEPGRGSVPGTTISDLGKDPNQYNPFGLAFAPNGTLYFVDIHVTCTGGLSGCGPENYGGRVMKVTFTNGQPSVPVAIATGFDFPTSVTVCVPAKSVCPYPSGKIKAPLSGPSENPAP
JGI20203J14952_1013670	JGI20203J14952_10136701	F099809	KTLADEIFRDLFVPHEPKPETKHPDTVPSVQYLHGKPVALSDSGDQDVVRSRLCRTQWPSRRVGRIEPPAGSTETGKFFSLA*
JGI20203J14952_1014679	JGI20203J14952_10146793	F001849	MHLLTSPVLANIYYIGGGSVGLLLLIIIVVLLVR*
JGI20203J14952_1015001	JGI20203J14952_10150012	F004030	MEEKQLREEFDTGLSRIRHEIKGRLVQHGFFGSVTYRDIEADHILSGSTVEIAVKGKTVERSFSRLEIEGCRLRVSGAVLSGVISMVDELSA*
JGI20203J14952_1015043	JGI20203J14952_10150432	F017820	VNEEKNNFNEAVSEWRRKHGIRDDDSVLQMLELLKIFFQNVKIEIPPDMDSIQLVTVRVSLQTLTQLTKEFSKEARELKQEIRSVPQITQQLSAGRAVAFFCVAIASLLAGILIGKYLL*
JGI20203J14952_1015092	JGI20203J14952_10150921	F031988	MVGWRVLKIVYLLTCRVLGVAVLVFRSDRGNAAELLV
JGI20203J14952_1015104	JGI20203J14952_10151041	F090991	MRIRRNIIAPLILAIGTVGSLVAVPAVTALTAVTPSTTAVAASPGYVYYG*
JGI20203J14952_1015117	JGI20203J14952_10151171	F063634	QLAVRLRLGFAPFDIMPNNCHSCRVYSPVNLDLVLQNEWHYLNCMEGHGGREVTLRHDQLVQLLAHYLKLAGAVVVLEPKHVFSETKKRPDLQVVLASKVYLIDVTIVNPTAPSNLRYSQKVLGQASAAEKIKIRKYAELSSQHNCIFIPFVIEVYGGIGKMAQEFLNEVSVFAHDHMTVSSRFDVVNGLKFAIACSVQRGNALIVLGGYANAVRVFGPT*
JGI20203J14952_1016521	JGI20203J14952_10165212	F102047	WSLLGNDIVAGPTAHGVCSDAATAMRMGEPRVKDGSVFLCIVEEVRLRISVGGLETTYQGTGRYFIGRRTRSGGVYWEALTRTIDPSEVYQVNELPLWISRELTGRG*
JGI20203J14952_1017051	JGI20203J14952_10170512	F087560	MYQRPELAKAICDDKRRAAEHHRLSAQAYPARRNGARRGIARLTGLRLRLSPAALRRAAQTV*
JGI20203J14952_1017181	JGI20203J14952_10171812	F000171	MPRILTLVLIAIVALTVLSFTFHILFSPWLLVAIAILAWIKFRPRRSHQ*
JGI20203J14952_1017192	JGI20203J14952_10171921	F057542	LARTPGRDGSPEARYDPMRQFAELAGDVRDPYPMLAGIRADNPVLRVDFAPPSGRGSRLDPKAPRLPSVFTVTSHELAQRVLTDSVRF
JGI20203J14952_1017481	JGI20203J14952_10174812	F016223	VFDSLSSETLRAAHDAARLLYDNHQALGLDPQAIKLDTLRVDICVALENRGELVTPAAGEPAP*
JGI20203J14952_1017677	JGI20203J14952_10176771	F097730	LIFCFLIIAGAFAGWRKSPLYSVKTTLKLAGGFLLIVALVLCTTYAIVNGYLGRSPAVEGIASFVAMIALACGASIFIVRITDAHVAALPPSARLISLNRHKIYRWIWRLMMFLLINAVAALVLPSSWKWLPVGLGGFALVLCGPMLSIGYMMARRSDRGMSAVIASPWAHWQYTPEKWAQWAESQRTWEIAQEGPWSWKGVLGFIFLCAALFALGALFTGGNLRENVMIVGGLTGFVILLALVAFWFKSTNFDRRYRRL
JGI20203J14952_1018132	JGI20203J14952_10181322	F049812	VLNTLDDEALPASLGGLARQPSPSGFGEIGVYGGGLQDFAVLTFRRGTGFQLLQDALSDGATQLKNAHGFGAVASAPLVNLVIMHSFVSHDTYLLVGLVSKDALEQAAVTLAAKPDQDYDHNP*
JGI20203J14952_1018431	JGI20203J14952_10184312	F025127	MTESMITVALVVGDPAHEDLQLNETSLAAAARTIEVHGAAIHGRWDSGRRSTVWCFDIERARAADLKDDLQAIWAGKLESVIWRPVGPAEVIRFS*
JGI20203J14952_1021701	JGI20203J14952_10217011	F085624	FTGSNRLRLAAYTLATLPAPPLEPGQPELETVAVAGAVLRDSYSSSHRWYEEFADVLADRGSSIHPPPVHDETLHDVLRKAFEDTRAQRRDDQLRTTLQMLWADELLETQRQVQADLAASADLFARRRHKNLFV*
JGI20203J14952_1021729	JGI20203J14952_10217293	F084160	MKRKKTQVEKASAGTITGAKMRAECNGLTDVEREKLGEEFLKLYYGGNRKPATAHRR*
JGI20203J14952_1022826	JGI20203J14952_10228261	F009475	AGFERRVASAAAVWQRPAGPEFAVGWVQPTRSPDAFGWYGSRFIIEFRRGGQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRILDDRARDEYLAQGKQVATAYSPDHDVWFRYRDERDLDAWFRLLPVLLPGVLEAVRLRLG*
JGI20203J14952_1023234	JGI20203J14952_10232341	F003567	MGQLFLWSAVRPAWAICPPDEVTWLDRATLSGNKDLTLHRAPRCAGFRYVHHRWELFSRDTTNPVYLAPDEGQARVSAEAV
JGI20203J14952_1023715	JGI20203J14952_10237152	F094572	AVGCGSNVKGHTYAAADKSVTIDFQSGGTATVNFGGVPGTCTYAQSGKQVNLTCGGQTEALTVAEDGSLNGPPDGVMGHLTKVK*
JGI20203J14952_1024046	JGI20203J14952_10240462	F011009	MNALSYKLTAFAAALVMNSLIMGAVGFLFELQSQPHLVSVARAVAAHQWLT*
JGI20203J14952_1025165	JGI20203J14952_10251651	F019062	VTVRLRLVTDHFQADGGIADAYLVGQLAGHGQSIDNLAFITSLPSGNLELLARGGAGTFVKLNYLDASGTERTGLAVTTGTDSPIISVAPEANGAATLDLENNGLTGVETVVPSPDNDGQLNLDGLLALTPQPEPA
JGI20203J14952_1026489	JGI20203J14952_10264891	F033125	AGPGYRIGIRPTELLAGDTDDGVEVPAEDGMVWAALHQDAIVVQLPDRAGALAGEPAAALLRRGQAS*
JGI20203J14952_1026522	JGI20203J14952_10265222	F027912	MEWVLQLVDEVDDAVGALRLFAMGWSEEIGLAVASSAATCAVCAALLRGVG*
JGI20203J14952_1026949	JGI20203J14952_10269491	F055088	FSGVPALASSHAASKPITGPEIASGVIHGKRATANNPIIPVAWRGLVTAHGIFSTNGGPPPKKGQRHTFTTSAGNLTVVVTAKPTNTQHSNVKTCHFSFATYVVFAVVGSRSTGKFAGTSGPGAVQVRFAGFGPRYKSGPKKGRCNTSPSAPELAKGAVASFLLSAVLTRR*
JGI20203J14952_1027096	JGI20203J14952_10270961	F014045	LGSPRDIPLTAHAQIQLEVGTPLVAPLKITWPSGL*
JGI20203J14952_1027145	JGI20203J14952_10271451	F001398	MAGFEHLTQSYDVGDLLDEIASADPPAFLRRCFAEGSSAPVLSWVRVQQLAVCAMVLDAIVNDRDYEFFERELIADWRVHYARACMKIKDTALQALRRVLEHDRPTD
JGI20203J14952_1027550	JGI20203J14952_10275501	F036796	LEISPAEWKEIMQLPEIRESWGIGDRETPEQFADMVYGVKFKFSPGMAPGYVGDLYLLQGDALGEPMTLLRKNGKLIFAD*
JGI20203J14952_1027936	JGI20203J14952_10279361	F015000	ADDGSTAVVELSDSGQRLRFVPARAGHGEGITAVTIAGLPGAGPLSIGGVSFASEEG*
JGI20203J14952_1028067	JGI20203J14952_10280672	F003524	MIRLLLDISRTPDGRLEGRIRTEGTDGTASAASADAWRPFSGVLELLKVVEEHT*
JGI20203J14952_1029308	JGI20203J14952_10293081	F075353	MSNVPAVSMEXLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL*
JGI20203J14952_1030699	JGI20203J14952_10306992	F096194	LIDKLTFLKGGAEGGSASADEERLMQLFQNRAGLKKAYADLKDEFHLLRDRL
JGI20203J14952_1031584	JGI20203J14952_10315841	F018772	TAKEDKGTLTSMNHPQEITPEYAERLVTLCTMISDVDREGMAFLVGHMASKNIDLAIEAYGALMTTALPSENS*
JGI20203J14952_1031644	JGI20203J14952_10316442	F017543	MTAVQPATVMSGRYQRAFTIAVVFLVAGWHLGGAGGQLLHNRADYGSFAFQCAMWLVMAVAIAVGS
JGI20203J14952_1031961	JGI20203J14952_10319611	F053426	PALERAMPADAVPGSTIPEDTEAELLLQDGTWAWAQVTGQRKDRHGRWCVGLRWYASPAVGGREGWYLYDPAFIRRPS*
JGI20203J14952_1032072	JGI20203J14952_10320722	F069266	MSEPLDPVAAGVASLLKSLRTRTGLQEDRLSGTELPLNTLTGLDRVR
JGI20203J14952_1032401	JGI20203J14952_10324012	F095392	MTNKEPQMLATLVTASTNAVQVFALIAVILFIIAGIIAFRDKTLWATLICAGLAFLSAAVIYLA*
JGI20203J14952_1034586	JGI20203J14952_10345861	F052253	MKKKSPHPDFDQTLELLRARSFDVIPYAGVAAGMLVSKHGV
JGI20203J14952_1035751	JGI20203J14952_10357512	F031189	DSYGFPADDTLDGFGPPMRYLQTACGAPQHQGARWFPDTITVRVPFTANA*
JGI20203J14952_1036713	JGI20203J14952_10367132	F007045	VSSDEDNPLRQFAAAWEATAAVVTEWAEQTAAVTSEAFRKLTNDPAIRAVMERWRTTVVFTRRNCECSCTRSHPDDVGICDNRAVITRRVSMGAGGDLEIPLCAPCAVAQ
JGI20203J14952_1040294	JGI20203J14952_10402942	F072837	MQDALKQQNKRERPNPEILAVLQQHGFAEGRMIAMSKSRYCKWHRSHFVVFNAQVCSLGGRVLKQVDLDLDLDAEKLTAAARAVGENLFVLFESDPSPFWESGSIPMSQILRDAVWWTRIHREDEDLFLPMNSGPLKRK
JGI20203J14952_1040493	JGI20203J14952_10404931	F047183	LILALPLLMTGTALAGEGVQVKITNDGTQDIVVTVYDMNAKPRAILLQNARINGFTSLPLSAIADANGVANLAWTATTVDANSARCGHDDTLGLRNDSAVHVHADSSCEA*
JGI20203J14952_1040622	JGI20203J14952_10406222	F062959	LIMVVLSFPAPFHGSDKMLGYALALAALWYFGGLLRRLRKGTAGVKPVSDLVDKP*
JGI20203J14952_1041003	JGI20203J14952_10410031	F020401	PRDEWGPFMDPEDCLRSLAAEALLHAHPERPLFPSSLGLMAVANAFVMLGLLPEPRAEAILAEHRDGLEREGFGNTWGVTKGELTVRPGAHEYWESREGGPTGLREVPVLVAAAGVRCPTAVAEVCFEWVKLTSTGLRVSFRATAADPGGNPPPPHVSMQRAMSEV
JGI20203J14952_1041186	JGI20203J14952_10411861	F072368	VPNCGAERRTSIMSVIQIFCLTTIGLAVLAEPAFAGTSPAPGPIAGIGLPALALIGGTYWVSRKLFARKK*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001452: Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences