Metagenome / Metatranscriptome Family F095818

Basic Information
Family ID	F095818
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	85 residues
Representative Sequence	MPLDDLLRRRFASFRTVYLPTAGRLAECPFELLPTGQRPHFTVRLQRADDSELDRLLAALGAAQPNAQYARGMIWREEG
Number of Associated Samples	94
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.27 %
% of genes near scaffold ends (potentially truncated)	51.43 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Unclassified (59.048 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (22.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.619 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.10% β-sheet: 11.21% Coil/Unstructured: 61.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00440	TetR_N	2.86
PF07929	PRiA4_ORF3	2.86
PF06441	EHN	1.90
PF00293	NUDIX	1.90
PF01909	NTP_transf_2	1.90
PF14031	D-ser_dehydrat	1.90
PF02810	SEC-C	1.90
PF08281	Sigma70_r4_2	0.95
PF00108	Thiolase_N	0.95
PF12680	SnoaL_2	0.95
PF05721	PhyH	0.95
PF01219	DAGK_prokar	0.95
PF13302	Acetyltransf_3	0.95
PF02371	Transposase_20	0.95
PF13280	WYL	0.95
PF00589	Phage_integrase	0.95
PF01061	ABC2_membrane	0.95
PF03030	H_PPase	0.95
PF13358	DDE_3	0.95
PF11535	Calci_bind_CcbP	0.95
PF07690	MFS_1	0.95
PF13977	TetR_C_6	0.95
PF02577	BFN_dom	0.95
PF01797	Y1_Tnp	0.95
PF00561	Abhydrolase_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.90
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.95
COG0818	Diacylglycerol kinase	Lipid transport and metabolism [I]	0.95
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.95
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.95
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.95
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
All Organisms	root	All Organisms	40.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
cellular organisms	root	All Organisms → cellular organisms	40.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.19 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.90 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.95 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.95 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.95 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.90 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.95 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.95 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.05 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.90 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.95 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.95 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10003939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10582	Open in IMG/M
3300000567\|JGI12270J11330_10156901	Not Available	844	Open in IMG/M
3300001403\|JGI20205J14842_1027660	Not Available	585	Open in IMG/M
3300001452\|JGI20203J14952_1011962	Not Available	964	Open in IMG/M
3300003505\|JGIcombinedJ51221_10000158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12603	Open in IMG/M
3300004092\|Ga0062389_103071056	Not Available	624	Open in IMG/M
3300005467\|Ga0070706_101565196	Not Available	602	Open in IMG/M
3300005468\|Ga0070707_100453844	Not Available	1242	Open in IMG/M
3300005591\|Ga0070761_10013610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4550	Open in IMG/M
3300005602\|Ga0070762_10121368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1536	Open in IMG/M
3300005712\|Ga0070764_10109759	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300005950\|Ga0066787_10160063	Not Available	515	Open in IMG/M
3300006028\|Ga0070717_11563978	Not Available	598	Open in IMG/M
3300006028\|Ga0070717_12156569	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006050\|Ga0075028_100863391	Not Available	555	Open in IMG/M
3300006176\|Ga0070765_100064322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3051	Open in IMG/M
3300006354\|Ga0075021_10741579	Not Available	632	Open in IMG/M
3300006804\|Ga0079221_10032663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2219	Open in IMG/M
3300009089\|Ga0099828_11124918	Not Available	697	Open in IMG/M
3300009523\|Ga0116221_1329880	Not Available	661	Open in IMG/M
3300009525\|Ga0116220_10027317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2323	Open in IMG/M
3300009683\|Ga0116224_10385224	Not Available	667	Open in IMG/M
3300009700\|Ga0116217_10044937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3243	Open in IMG/M
3300010361\|Ga0126378_10002441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13760	Open in IMG/M
3300010366\|Ga0126379_11783052	Not Available	720	Open in IMG/M
3300010376\|Ga0126381_102478325	Not Available	743	Open in IMG/M
3300011030\|Ga0138603_104622	Not Available	663	Open in IMG/M
3300011271\|Ga0137393_10886202	Not Available	762	Open in IMG/M
3300012211\|Ga0137377_10530352	Not Available	1115	Open in IMG/M
3300012357\|Ga0137384_10583623	Not Available	913	Open in IMG/M
3300012359\|Ga0137385_10120099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2321	Open in IMG/M
3300012917\|Ga0137395_11124154	Not Available	555	Open in IMG/M
3300012924\|Ga0137413_10910858	Not Available	683	Open in IMG/M
3300012929\|Ga0137404_10423817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300012930\|Ga0137407_10807205	Not Available	886	Open in IMG/M
3300012944\|Ga0137410_10743106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	820	Open in IMG/M
3300014164\|Ga0181532_10038013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3272	Open in IMG/M
3300014201\|Ga0181537_10578756	Not Available	766	Open in IMG/M
3300014489\|Ga0182018_10659107	Not Available	547	Open in IMG/M
3300014495\|Ga0182015_10335546	Not Available	984	Open in IMG/M
3300014501\|Ga0182024_10496433	Not Available	1553	Open in IMG/M
3300014501\|Ga0182024_12472446	Not Available	561	Open in IMG/M
3300014657\|Ga0181522_11037479	Not Available	509	Open in IMG/M
3300015242\|Ga0137412_10270730	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300015245\|Ga0137409_10332788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300015264\|Ga0137403_10278188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1575	Open in IMG/M
3300017942\|Ga0187808_10237142	Not Available	815	Open in IMG/M
3300017970\|Ga0187783_10054743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2942	Open in IMG/M
3300017970\|Ga0187783_10225057	Not Available	1375	Open in IMG/M
3300018009\|Ga0187884_10108784	Not Available	1199	Open in IMG/M
3300018034\|Ga0187863_10705055	Not Available	570	Open in IMG/M
3300019887\|Ga0193729_1208518	Not Available	659	Open in IMG/M
3300019888\|Ga0193751_1187298	Not Available	706	Open in IMG/M
3300020082\|Ga0206353_11105110	Not Available	642	Open in IMG/M
3300021181\|Ga0210388_10049523	All Organisms → cellular organisms → Bacteria	3500	Open in IMG/M
3300021402\|Ga0210385_11514694	Not Available	512	Open in IMG/M
3300021433\|Ga0210391_11536968	Not Available	510	Open in IMG/M
3300025633\|Ga0208480_1046061	Not Available	1155	Open in IMG/M
3300025634\|Ga0208589_1107153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300025910\|Ga0207684_10348954	Not Available	1274	Open in IMG/M
3300025910\|Ga0207684_10606694	Not Available	934	Open in IMG/M
3300025922\|Ga0207646_10143869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2148	Open in IMG/M
3300027334\|Ga0209529_1096081	Not Available	502	Open in IMG/M
3300027432\|Ga0209421_1129801	Not Available	519	Open in IMG/M
3300027497\|Ga0208199_1013867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1846	Open in IMG/M
3300027568\|Ga0208042_1000962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9505	Open in IMG/M
3300027625\|Ga0208044_1012959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	3126	Open in IMG/M
3300027648\|Ga0209420_1034030	Not Available	1582	Open in IMG/M
3300027853\|Ga0209274_10169752	Not Available	1104	Open in IMG/M
3300027875\|Ga0209283_10564533	Not Available	725	Open in IMG/M
3300027879\|Ga0209169_10062721	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300027903\|Ga0209488_10905188	Not Available	618	Open in IMG/M
3300027905\|Ga0209415_10556901	Not Available	863	Open in IMG/M
3300028775\|Ga0302231_10386134	Not Available	589	Open in IMG/M
3300028798\|Ga0302222_10169261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	859	Open in IMG/M
3300028801\|Ga0302226_10056006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1854	Open in IMG/M
3300028906\|Ga0308309_11514591	Not Available	573	Open in IMG/M
3300029999\|Ga0311339_10081091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4117	Open in IMG/M
3300029999\|Ga0311339_11895624	Not Available	514	Open in IMG/M
3300030007\|Ga0311338_10153476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2736	Open in IMG/M
3300030056\|Ga0302181_10211210	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300030490\|Ga0302184_10103753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300030520\|Ga0311372_11877507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	710	Open in IMG/M
3300030580\|Ga0311355_10762097	Not Available	893	Open in IMG/M
3300030707\|Ga0310038_10019080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4308	Open in IMG/M
3300031234\|Ga0302325_10334992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2420	Open in IMG/M
3300031236\|Ga0302324_101043171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300031236\|Ga0302324_102388871	Not Available	649	Open in IMG/M
3300031525\|Ga0302326_10688023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1498	Open in IMG/M
3300031670\|Ga0307374_10128164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2062	Open in IMG/M
3300031671\|Ga0307372_10479254	Not Available	601	Open in IMG/M
3300031672\|Ga0307373_10189750	Not Available	1498	Open in IMG/M
3300031708\|Ga0310686_117617436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1758	Open in IMG/M
3300031823\|Ga0307478_11305766	Not Available	603	Open in IMG/M
3300031859\|Ga0318527_10030827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1991	Open in IMG/M
3300032160\|Ga0311301_10304369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2549	Open in IMG/M
3300032160\|Ga0311301_10321473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2454	Open in IMG/M
3300032160\|Ga0311301_11891934	Not Available	704	Open in IMG/M
3300032180\|Ga0307471_103935958	Not Available	525	Open in IMG/M
3300032895\|Ga0335074_10017712	Not Available	10051	Open in IMG/M
3300032895\|Ga0335074_10039411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6583	Open in IMG/M
3300032895\|Ga0335074_10803293	Not Available	877	Open in IMG/M
3300032898\|Ga0335072_11243811	Not Available	657	Open in IMG/M
3300033158\|Ga0335077_11663677	Not Available	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.48%
Aquatic	Environmental → Aquatic	9.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.14%
Peat	Environmental → Terrestrial → Peat	13.33%
Freshwater	Environmental → Aquatic → Freshwater	7.62%
Sediment	Environmental → Aquatic → Sediment	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.71%
Loam	Environmental → Terrestrial → Soil → Loam	17.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.62%
Clay	Environmental → Terrestrial → Soil → Clay	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.81%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.29%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011030	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 83 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100039396	3300000567	Peatlands Soil	MSLDDLLRRRFTSFRTIYVPPAGQLTQSRFELLPTGQRPHFTIRLRDADAPELDRLLKALGAAQPNPQYARGMIWREEG*
JGI12270J11330_101569013	3300000567	Peatlands Soil	SVFAVLDMPLDDLLRRRFASFRTVYLPTAGRLAECPFELLPTGQRPHFTVRLQRADDSELDRLLAALGAAQPNAQYARGMIWREEG*
JGI20205J14842_10276602	3300001403	Arctic Peat Soil	RSHVQRTARARSLDGHPLLGISVFAVLDEPLDDLLRRRFATFRTIYLPTVDALAARGFELLPTGQRPHFTVRLRRADDQELGELLEALGAVQPNPAYAGREPWRGED*
JGI20203J14952_10119621	3300001452	Arctic Peat Soil	GEPLDDLLRRRFATFRTIYLPTAGRLAEHGFELLPTAQRPHFTVRLRRADDQELVHLLEALGAAQPNPAYPGSAA*
JGIcombinedJ51221_100001582	3300003505	Forest Soil	MPLEVLLRRRFASFRTIYLPTAGELGKHGFELLATAQRPHFTVRLKRADDRELGSLLAALGAAQPNPQYASTDVWREEG*
Ga0062389_1030710561	3300004092	Bog Forest Soil	EDLLRRRFASFRTIYLPTAGQLSEAGFELLATGQRPHFTVRLRRADDRELEELLAALGAARPNPQYARSAVWGVEG*
Ga0070706_1015651961	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LLRRRFTSFRTVCLPTAGQLCEHGFELLATGQRPHFTVRLRAADDPELAELLAALGPARPNPQYARSAIWREEG*
Ga0070707_1004538442	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPSGRHGPGRWTVSRCWAYRVFAVLDMPLDDLLRRRFTSFRTIYVPTAGQLAESRFELLPTGQRPHFTVRLRDADAPELDRLLKALGAAQPNPQYARGMIWREEG*
Ga0070761_100136102	3300005591	Soil	MGAGRTATAGHLGVRGAGMPLEDLLQRRFASFRTIYLPTAGRLRECGFELLATGQRPHFTVRLRRADDRELEELLAALGPARPNPQYARSAVLGVEG*
Ga0070762_101213681	3300005602	Soil	MDKLRRHAERTARAWALDGQPLFGISVFAVLGIPLDDLLRRRFTSFRTIYLPTAGRIAEFRFKLLPTGQQPHFTIQLQHADNAELDRLLAAFGAARPNSQYARGMIWREEG*
Ga0070764_101097592	3300005712	Soil	MRISVFAALGIELEDLLVRRFDSFRTIYLPTAGRLRERGFELLTTGQRPLYTVQLRRADDPELQELLAALGAANPNPQ*
Ga0066787_101600632	3300005950	Soil	LDGVPLLGISVFAVLDMSLDDLLRRRFASFRTFYLPTAGRLAEYQFELLPTGQRPHFTVRLHSADGPELDRLLAALGAPQANSQYARDKIWREED*
Ga0070717_115639781	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LLGISVFAVLGMPLEVLLRRRFASFRTIYLPTAGELGKHGFELMATAWRPHFTVRLERADDREQGRLLAALGPARPNPQHARTHVWREEG*
Ga0070717_121565692	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RAKLRRHVERTAQVWSLDGRPLLGVSVFAVLDMPLEELLRQRFANFRSIYLLTVAGLAGYGFELLATGQRPHFTIRLLRASDTEIDRLLTALGDARPNPEYAKSRDLT*
Ga0075028_1008633911	3300006050	Watersheds	LLRRRFTSFRTIYLPAAGQLAESRFELLPTGQRPHFTVRLRDADAPELDRLLKALGAAQPNPQYARGMIWREEG*
Ga0070765_1000643222	3300006176	Soil	VLDMSLDDLLRRRFTSFRTVYLPTAGRLAECQFELLPTGQRPHFTVRLQCADDPELDRLLAALGAAQPNSQYARGMIWRGEG*
Ga0075021_107415791	3300006354	Watersheds	VLDMPLDELLSRRFATFRTIHLLTVGRLRERGFELLSTGQRPHYTVRLQQTGELELKRLLDALGAARPNPSTLEAR*
Ga0079221_100326631	3300006804	Agricultural Soil	VFAVLDVPLDDLLRRRFTSFRVIYLLTADRLAEHEFELLPTGQRPHFTIRLQRADDSEVDRLLTALGAAQPNPQYARGMIWREEG*
Ga0099828_111249182	3300009089	Vadose Zone Soil	SLDGQPLLGISVFAVLGMPLEVLLRRRFASFRTIYLPTAGELSKHGFELLATAQRPHFTVRLELADDRELGELLAALGPAQPNRQYARTDVWREEG*
Ga0116221_13298803	3300009523	Peatlands Soil	ASFRTVYLPTAGRLAECPFELLPTGQRPHFTVRLQRADDSELDRLLAALGAAQPNAQYARGMIWREEG*
Ga0116220_100273172	3300009525	Peatlands Soil	MSDRADALLYAVLFATFATIYLPDIARLRQHGFDLLPTGQRPHYTIRLHHADDTELARLLTALGPAQPNPQYARTTIWRKED*
Ga0116224_103852242	3300009683	Peatlands Soil	MSDRADALLYAVLFATFATIYLPDIARLRQHGFGLLPTGQRPHYTIRLHHADDTELARLLTALGPAQPNPQYARATIWRKED*
Ga0116217_100449373	3300009700	Peatlands Soil	MPLDDLLRRRFASFRTVYLPTAGRLAECPFELLPTGQRPHFTVRLQRADDSELDRLLAALGAAQPNAQYARGMIWREEG*
Ga0126378_100024413	3300010361	Tropical Forest Soil	MGLDDLLRRRFTSFRTVYLPTAGQLGERGFELLATGQRPHFTVRLRAADDPELAELLAALGPARPNPQYAKSAIWREEG*
Ga0126379_117830523	3300010366	Tropical Forest Soil	LGISLDDLLQRRFTSFRTVYLPTAGQLGERGFELLATGQRPHFTVRLRAADDPELAELLAALGPARPNPQYAKSAIWREEG*
Ga0126381_1024783252	3300010376	Tropical Forest Soil	VFAVLGSSLEELLRRRFATFRTIYLPTAGELGKHGFELLATGQRPHFTVRLMRADELELAGLLAALGRAQLNPQYASTNAWREGG*
Ga0138603_1046221	3300011030	Peatlands Soil	LDGQPLLGISVFAVLDIPLGELLSRRFATFATIYLPDIARLRQHGFDLLPTGQRPHYTIRLHRADDTELAGLLTALGPAQPNPQYARTTIWRKED*
Ga0137393_108862021	3300011271	Vadose Zone Soil	RFATFRTIYLPTVGRLAEHGFELLPTALRPHFTVRLHRADDQELGQLLEALGPPQPNPQYARSTTWREEG*
Ga0137377_105303523	3300012211	Vadose Zone Soil	FATFRTIYLPTVGGLADHGFELLPTGQRPHFTVRLRRADDQELGELLEALGAARPNPAYAGSVTW*
Ga0137384_105836233	3300012357	Vadose Zone Soil	GHAERPARAWSLDGQPLLGISVFAVLGMPLEVLLRRRFASFRTIYLPTAGALGKHGFELLATAQRPQFTVRLERADDRELGKLLAALGPARPNPQYARTDVWREEG*
Ga0137385_101200992	3300012359	Vadose Zone Soil	LLGVSVFAVLGEPLNDLLRRRFATFRTIYLPTVGGLADHGFELLPTGQRPHFTVRLRRADDQELGELLEALGAARPNPAYAGSVTW*
Ga0137395_111241541	3300012917	Vadose Zone Soil	ARAWSLDGLPLLGISVFAVLGMPLEVLLRRRFASFRTIYLPTAGELGKHGFELMATAQRPHFTVRLERADDRELGRLLAALGPARPNPHYAKTDAWREEG*
Ga0137413_109108582	3300012924	Vadose Zone Soil	KLRRHAERTARAWSLDGQPLFGISVFAVLDTSLEDLLRQRFTNFRTIYLPTAAGLAGHGFELMPTGQRPHFTVRLRHDGDAELDRLLAALGDLQANPQYAGGRI*
Ga0137404_104238171	3300012929	Vadose Zone Soil	TLEDLLRRRFATFRTIYLPTAGRLAEHGFELLPTALRPHFTVRLRRADDQELGKLLEALSHPRPNPQYARSATWREEG*
Ga0137407_108072051	3300012930	Vadose Zone Soil	MWSEPRAWSLDGQPLLGISVFAVLGEPLDDLLRRRFVAFRTICLPTAGKLAEHGFELLPTAQRPHFTVRLRRADDQELGQLLEALGAPQPNPAYPGSAGGRRCTR*
Ga0137410_107431063	3300012944	Vadose Zone Soil	RAIYLPTAGRLTEYRFELLPTGKRPHFTVRLQHADDAELDRLLIALGAARPNPQYARGMIWREEG*
Ga0181532_100380133	3300014164	Bog	LLGISVFAVLGMSLDVLLRRRFTSFRAIYLPTVGQLGEHGFELLATGQRPHFSVRLRRADDRELAELLAALGPARPNPQYARTAVWGEEG*
Ga0181537_105787561	3300014201	Bog	GISVFAVLDMSLDDLLRRRFASFRTFYLSTAGRLAEYQFELLPTGQRPHFTVRLHSADGPELDRLLAALGAPQANSQYARDKIWREED*
Ga0182018_106591072	3300014489	Palsa	MCSELHAPGHWTGQPLLGISVFAVLGEPLDDLLRRRFTTSRTIYLPTVGRLAEYGFELLPTAQRPHFTVRLRRADDQELGQLLEAFGAPQRNPAYPGSAS*
Ga0182015_103355462	3300014495	Palsa	VPLEELLRQRFANFRAIYLPTAARLAGHGFELLPTGQRPHFTVRLRHANDAELDRLLAALGDLRPNSQYATGGI*
Ga0182024_104964333	3300014501	Permafrost	MSSARLASGLPAAKRLYGQPLLGISVFAVLDEPLDDLLRRRFTTFRTIYLPTVGRLAEHGFELLPTAQRPHFTVRLRRADDQEPGQLLNALGAPQPNPAYPGSAT*
Ga0182024_124724461	3300014501	Permafrost	RRRFATFRTIYLPTAGDLTEYGFGLLATALRPHFTVRVRRADDQELGKLLEALGSPQPNPQYARSVTWREEG*
Ga0181522_110374791	3300014657	Bog	PLYGISVFAVLDMPLNDLLRRRFTSFRTIYLPTVGRLAECRFELFPTGQRPHFTVRLQRADDSELDRLLTALGVTQPNPQYARGMIWREEG*
Ga0137412_102707301	3300015242	Vadose Zone Soil	SVFAVLGEPLDELLRRRFATFRNIYLPTVGGLADRGFELLPTGQRPHFTVRLRRADDQEFGELLEALGAVQPNPAYAGSVTWRGED*
Ga0137409_103327883	3300015245	Vadose Zone Soil	FAVLDTSLDELLRRRFTSFRAIYLPTAGRLTEYRFELLPTGKRPHFTVRLQHADDAELDRLLIALGAARPNPQYARGMIWREEG*
Ga0137403_102781884	3300015264	Vadose Zone Soil	SLDGQPLLGISVFAVLDITLEDLLRRRFATFRTIYLPTAGRLAEHGFELLPTALRPHFTVRLRRADDQELGKLLEALSHPRPNPQYARSATWREEG*
Ga0187808_102371423	3300017942	Freshwater Sediment	RTIYLPTVGDLSAQGFELLATAQRPHFTVRLRRADDRELARLLTALGPARLNPQYAKTDVWREEG
Ga0187783_100547434	3300017970	Tropical Peatland	LPARGRPLLGISVFAVLGIALEDLLAHRFASFRTIYLPTAGQLREREFELLATGQRPHYTVRLRRADDPELEELLAALGPACPNPQYGRSSIWREER
Ga0187783_102250572	3300017970	Tropical Peatland	MSLEQLLARRFASFRTIYLPTAAQLREHGFELLATGQRPHYTVRLRRADDPELDELVAALGAARPNPQYGRSSIWREGG
Ga0187884_101087841	3300018009	Peatland	QPLLGISVFAVLGEPLDDLLRRRFATFRTIYLPTAGRLAEHGFELLPTAQRPHFTVRLRRADDQELAHLLEALGAAQPNPAYPGSAA
Ga0187874_102136451	3300018019	Peatland	VLLRRRFASFRTIYLPTAGELSNHGFELLATAQRPHFTVLLERADDRELGKLLTALGPARPN
Ga0187863_107050551	3300018034	Peatland	RGYYGLHLPTAGRLAPYQFELLPTGQRPHFTLRLRSAVYPELDRLQAALGAPQANPQYAGGKIWREED
Ga0193729_12085181	3300019887	Soil	MRSEPRVPGRSTGSRFATFRTIYLPTFGRLAEHGFELLPTALRPHFTVRLRRADDQELGKLLEALSHPRPNPQYARSATWREEG
Ga0193751_11872981	3300019888	Soil	FATFRTIYLPTAGRLAEHGFELLPTALRPHFTVRLRRADDQELRQLLEALGPPQPNPQYARSTIWREED
Ga0206353_111051101	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	RAWSLDGEPLLGISVFAVLDMPLEDLLRRRFANFRSIYLPSAAGLAGHGFELLPTGQRPHYTVRLRRADHPELDLLLAALGDSQPNPQYAKGGI
Ga0210388_100495233	3300021181	Soil	MPLEVLLRRRFASFRTIYLPTAGELGKHGFELLATAQRPHFTVRLKRADDRELGSLLAALGAAQPNPQYASTDVWREEG
Ga0210385_115146942	3300021402	Soil	RAWALDGRPLFGISVFAVLGMPLDDLLRRRFTSFRAVHMPTVGRLAEGQFELLPTGQRPHFTARLQSADGPELDRLLAALGAAQPNPQYARGMIWREEG
Ga0210391_115369681	3300021433	Soil	PLEVLLRRRFASFRTIYLPTAGELGKHGFELLATAQRPHFTVRLKRADDRELGSLLAALGAAQPNPQYASTDVWREEG
Ga0208480_10460612	3300025633	Arctic Peat Soil	TARAWSLDGQPLLGISVFAVLGEPLDDLLRRRFATFRTIYLPTAGRLAEHGFELLPTAQRPHFTVRLRRADDQELVHLLEALGAAQPNPAYPGSAA
Ga0208589_11071531	3300025634	Arctic Peat Soil	RTIHMPTVGRLAECQFELLPTGQRPHFTVRVQRADDTEFDQLLAALGAPQTNSQYARGMIWREEG
Ga0207684_103489542	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLDMPLDDLLRRRFTSFRTIYVPTAGQLAESRFELLPTGQRPHFTVRLRDADAPELDRLLKALGAAQPNPQYARGMIWREEG
Ga0207684_106066942	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MFSGPRVPGRSTGQPLLGISVFAVLGEPLDDLLRRRFATFRTIYLPTVGGLADHGFELLPTGQRPHFTVRLRRADDQELGELLEALGAVQRNPAYAEREL
Ga0207646_101438692	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPLDDLLRRRFTSFRTIYVPTAGQLAESRFELLPTGQRPHFTVRLRDADAPELDRLLKALGAAQPNPQYARGMIWREEG
Ga0209529_10960811	3300027334	Forest Soil	GQPLLGISVFAVLGEPLDDLLRRRFATFSTIYLPTAGRLAEHGFELLPTAQRPHFTVRLHRADDQELVHLLGAAQPNPTHPGSAA
Ga0209421_11298012	3300027432	Forest Soil	PDKLRSHAQRTARAWSLDGQPLLGISVFAVLDVPLDDLLQRRFATFRTIYLPAVAHLTKHGFELLATGQRPHFTVRLHRADDQELAQLLTALGAPQPNPQYARSTIWREED
Ga0208199_10138672	3300027497	Peatlands Soil	MSLDDLLRRRFTSFRTIYVPPAGQLTQSRFELLPTGQRPHFTIRLRDADAPELDRLLKALGAAQPNPQYARGMIWREEG
Ga0208042_100096215	3300027568	Peatlands Soil	MSLDDLLRRRFTSFRTIYVPPAGQLTQSRFELLPTGQRPHFTVRLRDADAPELDRLLKALGAAQPNPQYARGMIWREEG
Ga0208044_10129592	3300027625	Peatlands Soil	MSDRADALLYAVLFATFATIYLPDIARLRQHGFDLLPTGQRPHYTIRLHHADDTELARLLTALGPAQPNPQYARATIWRKED
Ga0209420_10340305	3300027648	Forest Soil	SFRTIYLPTAGRLRECGFELLATGQRPHFTVRLRRADDRELEELLAALGPARPNPQYARSAVLGVEG
Ga0209274_101697522	3300027853	Soil	MPLEDLLQRRFASFRTIYLPTAGRLRECGFELLATGQRPHFTVRLRRADDRELEELLAALGPARPNPQYARSAVLGVEG
Ga0209283_105645333	3300027875	Vadose Zone Soil	HAQRTARAWSLDGQPLLGISVFAVLGLPLDDLLRRRFATFRTIYLPTVGRLAEHGFELLPTALRPHFTVRLHRADDQELGQLLEALGPPQPNPQYARSTTWREEG
Ga0209169_100627212	3300027879	Soil	MRISVFAALGIELEDLLVRRFDSFRTIYLPTAGRLRERGFELLTTGQRPLYTVQLRRADDPELQELLAALGAANPNPQYGTSTI
Ga0209488_109051882	3300027903	Vadose Zone Soil	LLRQRFANFRSIYLLTVAGLAGYGFELLATGQRPHFTIRLLRASDTEIDRLFTALGDARPNPEYPKSRDLT
Ga0209415_105569011	3300027905	Peatlands Soil	RRFTSFRTIYLPTAGRLAECRFELLPTGQRPHFTVQLQSAHDSELERLLSALDARQPNPQYARGMIWREEG
Ga0302231_103861341	3300028775	Palsa	WALDGRPLYGISVFAVLDMPLNDLLRRRFTSFRTIYLPTVGRLAECRFELFPTGQRPHFTVRLQRADDSELDRLLTALGVTQPNPQYARGMIWREEG
Ga0302222_101692611	3300028798	Palsa	MSLNDLLRRRFTSFRTIYLPTVGRLAECRFELFPTGQRPHFTVRLQRADDSELDRLLTALGVTQPNPQYARGMIWREEG
Ga0302226_100560064	3300028801	Palsa	MPLNDLLRRRFTSFRTIYLPTVGRLAECRFELFPTGQRPHFTVRLQRADDSELDRLLTALGVTQPNPQYARGMIWREEG
Ga0308309_115145911	3300028906	Soil	MRISVFAALGIELEDLLMRRFDSFRTIYLPTAGRLRERGFELLATGQRPHYTVQLRRADDPELEELLAALGAAHPNPQYGRSNIWR
Ga0311339_100810914	3300029999	Palsa	LLGISVFAVLDMSLDDLLRRRFTSFRTVYLPAAGKLAEYQFELLPTGQRPHFTVRLRSAANPEIDRLLAALGAPQANSQYARGKIWREED
Ga0311339_118956242	3300029999	Palsa	LDGVPLLGISVFAVLDMSLDDLLRRRFASFRTIYLPTAGRLARYQFELLPTGQSPHFTVRLHSADSPELARLLAALGAPQANSQYARGKIWREEDRDVPGGHHRRPQR
Ga0311338_101534765	3300030007	Palsa	MSLDDLLCRRFASFRTFYLPTAGRLAEYQFELLPTGQRPHFTVRLRSTDGPEFDRLLAALGAPQANSQYAIDKIWREED
Ga0302181_102112101	3300030056	Palsa	DLLRRRFTSFRTVYLPAAGKLAEYQFELLPTGQRPHFTVRLRSAANPEIDRLLAALGAPQANSQYARGKIWREED
Ga0302184_101037533	3300030490	Palsa	MSLDDLLCRRFASFRTFYLPTAGRLAEYQFELLPTGQRPHFTVRLRSTDGPEFDRLLAALGAPQANSQYARDKIWREED
Ga0311372_118775071	3300030520	Palsa	MSLDDLLCRRFASFRTFYLPTAGRLAEYQFELLPTGQRPHFTVRLRSTDGPELDRLLAALGAPQANSQYARGKMWREEDLDVPG
Ga0311355_107620971	3300030580	Palsa	VVGLDASELTVAIVGISVFAVLGMPLEVLLRRRFASFRTIYLPTFGELSKHGFELLATAQRPHFTVRLERADDWELGKLLAGLGPARPNPQYARTDVWREEG
Ga0310038_100190803	3300030707	Peatlands Soil	VLDMPLDDLLRRRFASFRTVYLPTAGRLAECPFELLPTGQRPHFTVRLQRADDSELDRLLAALGAAQPNAQYARGMIWREEG
Ga0302325_103349921	3300031234	Palsa	MSLNDLLRRRFTSFRTIYLPTVGRLAECQFELFPTGQRPHFTIRLQRADDSELDRLLAALGVTQPNPQYARGMIWREEG
Ga0302324_1010431713	3300031236	Palsa	DMSLDDLLCRRFASFRTFYLPTAGRLAEYQFELLPTGQRPHFTVRLRSTDGPEFDRLLAALGAPQANSQYARDKIWREED
Ga0302324_1023888711	3300031236	Palsa	LTVAIVGISVFAVLGMPLEVLLRRRFASFRTIYLPTFGELSKHGFELLATAQRPHFTVRLERADDWELGKLLAGLGPARPNPQYARTDVWREEG
Ga0302326_106880232	3300031525	Palsa	VPLLGISVFAVLDMSLDDLLRRRFASFRTIYLPTAGRLARYQFELLPTGQSPHFTVRLHSADSPELARLLAALGAPQANSQYARGKIGREEDRDVPGGHHRRPQR
Ga0307374_101281642	3300031670	Soil	LRSHVQRTARAWSLDGQPLLGISVFALLGVSLDELLSQRFSTFRTIYLPSAGQLTRHGFELLPTGQRPHYTVRLHSADDAELAKLLGALGDPQDNPQYARSTWREED
Ga0307372_104792541	3300031671	Soil	MPLEVLLRRRFSSFRTIYLPAAGDLGRHGFELLATAQRPHFTVRLERADDRELGELLAALGPARPNPQYARTDVWR
Ga0307373_101897502	3300031672	Soil	MPLEVLLRRRFSSFRTIYLPTAGDLGRHGFELLATAQRPHFTVRLERADDRELGELLAALGPARPNPQYARTDVWREEG
Ga0310686_1176174363	3300031708	Soil	MPLNDLLRRRFTSFRTIYLPTAGRLAECRFELFPTGQRPHFTVRLQRADDSELDRLLTALGVTQPNPQYARGMIW
Ga0307478_113057661	3300031823	Hardwood Forest Soil	DGRPLLGVSVFAVLGLPLEELLRQRFANFRNVYLLTVAGLAGYGFELLATGKRPHFTVRLIRASDAELDRLLAALGDAQPNPEYAWSRDLT
Ga0318527_100308273	3300031859	Soil	VPLLGISVFAVLGVPLDDLLRRRFATFRTIYLPSAGHLTGQGFELLPTGQAPHFTVRLRRADDHELSRLLAALGAPQPNPQYARSMIWRREED
Ga0311301_103043691	3300032160	Peatlands Soil	DLLRRRFTSFRTIYLPTAGRLAECRFELLPTGQRPHFTVQLQSAHDSELERLLSALDARQPNPQYARGMIWREEG
Ga0311301_103214731	3300032160	Peatlands Soil	MPLDDLLRRRFTSFRAVHMPAVGRLAEGRFELLPTGRRPHFTVRLQSADDSELDRLLAALGVAQPNPQYARGMIWREEG
Ga0311301_118919342	3300032160	Peatlands Soil	MSLDDLLRRRFTSFRTVYLPTAGRLAECQFELLPTGQRPHFTVRLQRADDSEPDRLLAALGAAQPNAQYARGMIWREEG
Ga0307471_1039359581	3300032180	Hardwood Forest Soil	HVERTARAWSLDGRPLLGISVFAVLDMPLEELLRQRFANFRSVYLLTVAGVTRCGFELLATGQRPHFTIRLHRASDDELDRLLAALGDVQPNPEYAMVRDLS
Ga0335074_100177122	3300032895	Soil	LLGISVFAVLDEPLDDLLRRRFATFRTVYLPTVGGLADRGFELLPTGQRPHFTVRLRRGDDKELWELLEALGVVQPNPAYARSVTWRGEG
Ga0335074_100394112	3300032895	Soil	VFAVLGEPLGDLLRRRFATFRSIYLPTVGGLADRGFELLATGQRPHFTVRLRRADEQELGELLEALGAAQRNPAYAGGEL
Ga0335074_108032932	3300032895	Soil	MELDELLARRFATFRTVYLPTASQLGERGFELLATGQQPHYTVRLRSADDKELAELLAALGPAQPNPQYGRSSIWREEG
Ga0335072_112438111	3300032898	Soil	GISVFAVLGIELDDLLARRFATFRTVYLPTAGQLGERGFELLATGQAPHYTVRLRRADDSELGDLLAALGTAQANPQYGRSSFWREEG
Ga0335077_116636772	3300033158	Soil	PPDDLLQRRFATFRTIYLPAVAHLTKHGFKLLATGQRPHFTIQLRRADDQELAQLLTALGAPRPNPQYARSAIWRKED

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095818

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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