Metagenome / Metatranscriptome Family F078948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	102 residues
Representative Sequence	MVKFWRRKVQPDPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG
Number of Associated Samples	101
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.17 %
% of genes near scaffold ends (potentially truncated)	42.24 %
% of genes from short scaffolds (< 2000 bps)	75.86 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.379 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.655 % of family members)
Environment Ontology (ENVO)	Unclassified (31.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.38% β-sheet: 1.54% Coil/Unstructured: 53.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00589	Phage_integrase	2.59
PF02627	CMD	1.72
PF01850	PIN	1.72
PF13683	rve_3	1.72
PF11716	MDMPI_N	1.72
PF13374	TPR_10	1.72
PF02861	Clp_N	1.72
PF02358	Trehalose_PPase	0.86
PF13470	PIN_3	0.86
PF00293	NUDIX	0.86
PF03551	PadR	0.86
PF05016	ParE_toxin	0.86
PF00282	Pyridoxal_deC	0.86
PF00903	Glyoxalase	0.86
PF03050	DDE_Tnp_IS66	0.86
PF13643	DUF4145	0.86
PF12728	HTH_17	0.86
PF04978	DUF664	0.86
PF07592	DDE_Tnp_ISAZ013	0.86
PF00075	RNase_H	0.86
PF10708	DUF2510	0.86
PF12681	Glyoxalase_2	0.86
PF08241	Methyltransf_11	0.86
PF01548	DEDD_Tnp_IS110	0.86
PF08044	DUF1707	0.86
PF08240	ADH_N	0.86
PF10009	DUF2252	0.86
PF07927	HicA_toxin	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	1.72
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.72
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.72
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.86
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.86
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.86
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.86
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.86
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.86
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.38 %
Unclassified	root	N/A	33.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.38 %
Unclassified	root	N/A	33.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.38 %
Unclassified	root	N/A	33.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.52 %
Unclassified	root	N/A	33.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.52 %
Unclassified	root	N/A	33.62 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	48.28 %
Unclassified	root	N/A	33.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.62 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	31.90 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	1.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.86 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.62 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	27.59 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	1.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.72 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.86 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.86 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.86 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.62 %
Marinactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora	25.86 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	1.72 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.86 %
Murinocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Murinocardiopsis	0.86 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.86 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.86 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.86 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.62 %
Marinactinospora thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	25.86 %
Jiangella gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella gansuensis	1.72 %
Mycobacterium leprae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium leprae	0.86 %
Streptomyces huasconensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces huasconensis	0.86 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.86 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.86 %
Murinocardiopsis flavida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Murinocardiopsis → Murinocardiopsis flavida	0.86 %
Actinomadura fibrosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura fibrosa	0.86 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	0.86 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.62 %
Marinactinospora thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	25.86 %
Jiangella gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella gansuensis	1.72 %
Streptomyces sp. Tu6071	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	0.86 %
Mycobacterium leprae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium leprae	0.86 %
Streptomyces huasconensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces huasconensis	0.86 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.86 %
Murinocardiopsis flavida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Murinocardiopsis → Murinocardiopsis flavida	0.86 %
Actinomadura fibrosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura fibrosa	0.86 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	0.86 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908044\|A5_c1_ConsensusfromContig44831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	811	Open in IMG/M
3300001384\|JGI20190J14840_1001048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3719	Open in IMG/M
3300001384\|JGI20190J14840_1004286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	1606	Open in IMG/M
3300001403\|JGI20205J14842_1000966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5045	Open in IMG/M
3300001405\|JGI20186J14852_1002167	Not Available	1320	Open in IMG/M
3300001449\|JGI20208J14878_1009239	Not Available	1282	Open in IMG/M
3300001452\|JGI20203J14952_1005323	Not Available	1425	Open in IMG/M
3300001454\|JGI20204J15135_1008822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium leprae	962	Open in IMG/M
3300003505\|JGIcombinedJ51221_10011929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2861	Open in IMG/M
3300005591\|Ga0070761_10112758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1575	Open in IMG/M
3300005602\|Ga0070762_10202398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	1215	Open in IMG/M
3300005712\|Ga0070764_10012069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4233	Open in IMG/M
3300005994\|Ga0066789_10151899	Not Available	983	Open in IMG/M
3300006176\|Ga0070765_101526471	Not Available	629	Open in IMG/M
3300009623\|Ga0116133_1146070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	618	Open in IMG/M
3300009759\|Ga0116101_1101781	Not Available	669	Open in IMG/M
3300010867\|Ga0126347_1103450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	897	Open in IMG/M
3300010876\|Ga0126361_10217539	Not Available	944	Open in IMG/M
3300010880\|Ga0126350_11094020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	719	Open in IMG/M
3300014164\|Ga0181532_10157177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1362	Open in IMG/M
3300014165\|Ga0181523_10552358	Not Available	634	Open in IMG/M
3300014169\|Ga0181531_10023660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3533	Open in IMG/M
3300014492\|Ga0182013_10230955	Not Available	1086	Open in IMG/M
3300014498\|Ga0182019_10988313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	610	Open in IMG/M
3300014501\|Ga0182024_10711141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura fibrosa	1238	Open in IMG/M
3300014657\|Ga0181522_10834881	Not Available	566	Open in IMG/M
3300014838\|Ga0182030_10277007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1880	Open in IMG/M
3300016730\|Ga0181515_1217689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	567	Open in IMG/M
3300017821\|Ga0187812_1029831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1865	Open in IMG/M
3300017924\|Ga0187820_1011863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300017926\|Ga0187807_1009198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3035	Open in IMG/M
3300017932\|Ga0187814_10253070	Not Available	668	Open in IMG/M
3300017937\|Ga0187809_10233608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	661	Open in IMG/M
3300017940\|Ga0187853_10419218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	591	Open in IMG/M
3300017946\|Ga0187879_10086562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1806	Open in IMG/M
3300017961\|Ga0187778_10656920	Not Available	706	Open in IMG/M
3300017970\|Ga0187783_10016460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5459	Open in IMG/M
3300017970\|Ga0187783_10980054	Not Available	609	Open in IMG/M
3300017972\|Ga0187781_11437816	Not Available	510	Open in IMG/M
3300018007\|Ga0187805_10183052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	955	Open in IMG/M
3300018044\|Ga0187890_10398218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300018058\|Ga0187766_10268518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1096	Open in IMG/M
3300018085\|Ga0187772_11121903	Not Available	577	Open in IMG/M
3300018090\|Ga0187770_10927504	Not Available	699	Open in IMG/M
3300020582\|Ga0210395_10021220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4777	Open in IMG/M
3300021170\|Ga0210400_11475550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	540	Open in IMG/M
3300021180\|Ga0210396_10267973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300021401\|Ga0210393_10837304	Not Available	748	Open in IMG/M
3300021401\|Ga0210393_11049027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	659	Open in IMG/M
3300021402\|Ga0210385_10435710	Not Available	988	Open in IMG/M
3300021432\|Ga0210384_11794531	Not Available	519	Open in IMG/M
3300021478\|Ga0210402_11023964	Not Available	753	Open in IMG/M
3300022498\|Ga0242644_1039783	Not Available	530	Open in IMG/M
3300022522\|Ga0242659_1135475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	513	Open in IMG/M
3300022523\|Ga0242663_1087077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Murinocardiopsis → Murinocardiopsis flavida	605	Open in IMG/M
3300022714\|Ga0242671_1118679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	520	Open in IMG/M
3300022717\|Ga0242661_1164732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	505	Open in IMG/M
3300022721\|Ga0242666_1009084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1668	Open in IMG/M
3300024227\|Ga0228598_1120754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	532	Open in IMG/M
3300025504\|Ga0208356_1007129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2609	Open in IMG/M
3300025574\|Ga0208717_1099052	Not Available	648	Open in IMG/M
3300025588\|Ga0208586_1002750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5018	Open in IMG/M
3300025588\|Ga0208586_1028907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	1307	Open in IMG/M
3300025588\|Ga0208586_1127591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	537	Open in IMG/M
3300025625\|Ga0208219_1005786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4221	Open in IMG/M
3300025625\|Ga0208219_1036176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1308	Open in IMG/M
3300025633\|Ga0208480_1009754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces huasconensis	3119	Open in IMG/M
3300025634\|Ga0208589_1033944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1372	Open in IMG/M
3300025703\|Ga0208357_1025973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2146	Open in IMG/M
3300026214\|Ga0209838_1032226	Not Available	747	Open in IMG/M
3300026217\|Ga0209871_1009710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1805	Open in IMG/M
3300026294\|Ga0209839_10031646	Not Available	2001	Open in IMG/M
3300026294\|Ga0209839_10158651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	743	Open in IMG/M
3300027110\|Ga0208488_1007718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2180	Open in IMG/M
3300027158\|Ga0208725_1029526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	866	Open in IMG/M
3300027497\|Ga0208199_1006921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2791	Open in IMG/M
3300027648\|Ga0209420_1066961	Not Available	1052	Open in IMG/M
3300027696\|Ga0208696_1047098	Not Available	1518	Open in IMG/M
3300027829\|Ga0209773_10103066	Not Available	1179	Open in IMG/M
3300027855\|Ga0209693_10167521	Not Available	1084	Open in IMG/M
3300027879\|Ga0209169_10001931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12643	Open in IMG/M
3300027884\|Ga0209275_10056758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300027884\|Ga0209275_10389169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	785	Open in IMG/M
3300027889\|Ga0209380_10290406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	961	Open in IMG/M
3300027895\|Ga0209624_10371501	Not Available	953	Open in IMG/M
3300027908\|Ga0209006_10899494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	711	Open in IMG/M
3300027908\|Ga0209006_11456657	Not Available	521	Open in IMG/M
3300028731\|Ga0302301_1010079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2961	Open in IMG/M
3300028773\|Ga0302234_10271620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	728	Open in IMG/M
3300028776\|Ga0302303_10237957	Not Available	623	Open in IMG/M
3300028801\|Ga0302226_10325254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	647	Open in IMG/M
3300028877\|Ga0302235_10037689	Not Available	2420	Open in IMG/M
3300028877\|Ga0302235_10443410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	553	Open in IMG/M
3300028906\|Ga0308309_11476549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	581	Open in IMG/M
3300029910\|Ga0311369_10076377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3486	Open in IMG/M
3300029910\|Ga0311369_10767057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	784	Open in IMG/M
3300029915\|Ga0311358_11015185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	569	Open in IMG/M
3300029999\|Ga0311339_10106474	Not Available	3439	Open in IMG/M
3300030007\|Ga0311338_10088411	Not Available	3905	Open in IMG/M
3300030509\|Ga0302183_10317004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	602	Open in IMG/M
3300030520\|Ga0311372_10773996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella gansuensis	1319	Open in IMG/M
3300030578\|Ga0210275_10304429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	557	Open in IMG/M
3300030906\|Ga0302314_10425603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella gansuensis	1460	Open in IMG/M
3300031028\|Ga0302180_10036163	Not Available	3058	Open in IMG/M
3300031090\|Ga0265760_10163087	Not Available	736	Open in IMG/M
3300031234\|Ga0302325_10143284	All Organisms → cellular organisms → Bacteria	4303	Open in IMG/M
3300031236\|Ga0302324_100342773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2263	Open in IMG/M
3300031236\|Ga0302324_101101096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1068	Open in IMG/M
3300031708\|Ga0310686_100984238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	558	Open in IMG/M
3300031708\|Ga0310686_101059917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1987	Open in IMG/M
3300031708\|Ga0310686_101687059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	581	Open in IMG/M
3300031708\|Ga0310686_113156512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3321	Open in IMG/M
3300031823\|Ga0307478_11512389	Not Available	555	Open in IMG/M
3300032515\|Ga0348332_14494390	Not Available	691	Open in IMG/M
3300034124\|Ga0370483_0254632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Marinactinospora → Marinactinospora thermotolerans	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.62%
Aquatic	Environmental → Aquatic	15.52%
Plants	Host-Associated → Plants	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.24%
Peat	Environmental → Terrestrial → Peat	15.52%
Freshwater	Environmental → Aquatic → Freshwater	14.66%
Sediment	Environmental → Aquatic → Sediment	0.86%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.66%
Loam	Environmental → Terrestrial → Soil → Loam	14.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	15.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	14.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.45%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.86%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.86%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300001405	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012	Environmental	Open in IMG/M
3300001449	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_c1_01531280	2124908044	Soil	MVKFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGID
JGI20190J14840_10010481	3300001384	Arctic Peat Soil	MVRFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVETQVTPSPPAFAQPLDVLATVVALRRKQLGID*
JGI20190J14840_10042865	3300001384	Arctic Peat Soil	MVRFWRRRVQPGPAHAQPAAPETLADWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGIG*
JGI20205J14842_10009664	3300001403	Arctic Peat Soil	MVRFWRRRVQPGPAHAQPAAPETLADWAGEVDVSRLSDRTFQDAEDYLKGYRXMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGIG*
JGI20186J14852_10021672	3300001405	Arctic Peat Soil	VQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLXLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID*
JGI20208J14878_10092392	3300001449	Arctic Peat Soil	VQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGID*
JGI20203J14952_10053233	3300001452	Arctic Peat Soil	MVKFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGID*
JGI20204J15135_10088221	3300001454	Arctic Peat Soil	MVKFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVETQVTPSPPAFAQPLDVLATVVALRRKQLGIG*
JGIcombinedJ51221_100119292	3300003505	Forest Soil	MARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDRTIRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIATVVALRRKQPGIG*
Ga0070761_101127584	3300005591	Soil	MVKFWRRRVQPGPAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVIATVVALRRKQLGTG*
Ga0070762_102023981	3300005602	Soil	CGRGELMVKFWRRRVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEYYLKGYRYMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVIATVVALRRKQLGTG*
Ga0070764_100120691	3300005712	Soil	MVKFWRRRVQPGPAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDIIATVVALRRKQLGTG*
Ga0066789_101518991	3300005994	Soil	MVKFWRRRVQPGPAHAQPAVPADQQRRPLGRAALVAWAGEVDVSRLSNRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID*
Ga0075029_1013545811	3300006052	Watersheds	MVKFWRRRVQQDTHNAQPAHNAQPAPGPADLAAWAREADVSRLSSQTVREAEDYLNKYRHMNLELSQQMGWRVMAAIEAQVTPSP
Ga0070765_1015264712	3300006176	Soil	MARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDRTIRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQL
Ga0116133_11460701	3300009623	Peatland	WRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID*
Ga0116101_11017811	3300009759	Peatland	GHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETPLNPSPPADAQPVDVIATVVALRRKQLGSD*
Ga0126347_11034501	3300010867	Boreal Forest Soil	MVKFWRRRVQPDPPHAQPAAPADLVTWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVIATVVALRRKQLGIG*
Ga0126361_102175391	3300010876	Boreal Forest Soil	MVKFWRRRVQPGPPHAQPAVPADLVAWAGEVDVSRLSDKTVRDAEDFLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATLVALRRKQLGID*
Ga0126350_110940201	3300010880	Boreal Forest Soil	MVKFWRRRVQPDPPHAQPAAPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVIATVLALRRKQLGTGLSSLSALALPSLGYEPYD
Ga0181532_101571771	3300014164	Bog	MVKFWRRRVQPGPAHAQPAVPADLVVWAGEVDVSRLSNGTFQDAEDYLKGYRHMNLDLSQQVGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID*
Ga0181523_105523581	3300014165	Bog	KGELMVKFWRRRVQPGPAHAQPAVPADLVVWAGEVDVSRLSNGTFQDAEDYLKGYRHMNLDLSQQVGWRLIAAVETQVTPSPPADAQPVDVLATVVALRRKQRGID*
Ga0181531_100236604	3300014169	Bog	MVKFWRRKVQPDPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG*
Ga0182013_102309552	3300014492	Bog	MVENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFSQPLDVLATLVALRRKQLGID*
Ga0182019_109883131	3300014498	Fen	MVKFWRRRVQPDPPPAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNPDLSQEMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG*
Ga0182024_107111411	3300014501	Permafrost	MVKFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFSQPLDVLATLVALRRKQLGID*
Ga0181522_108348812	3300014657	Bog	VKFWRRKVQPDPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG*
Ga0182030_102770072	3300014838	Bog	MGELMVKFWRRRVQPGPPYAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALR
Ga0181515_12176891	3300016730	Peatland	ENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0187812_10298312	3300017821	Freshwater Sediment	MVKFWRRKVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRYMNLDLSQQMGWRMIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG
Ga0187820_10118631	3300017924	Freshwater Sediment	MVKFWRRKVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRYMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG
Ga0187807_10091984	3300017926	Freshwater Sediment	MVKFWRRKVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRYMNLNLSQQMGWRMIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG
Ga0187814_102530701	3300017932	Freshwater Sediment	QQDTRNAQPVAVPADLVVWAREVDVSRLSDQTVREAEDYLNMYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVIATVLELRRKQLGTGLSSLSARSCRDPRC
Ga0187809_102336081	3300017937	Freshwater Sediment	MVKFWRRRVQPGPSHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRYMNLDLSQQMGWRMIAAVEAQVTPSPPADAQPLDVLATVLALRRK
Ga0187853_104192181	3300017940	Peatland	MVENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDMTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0187879_100865622	3300017946	Peatland	MVENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0187778_106569202	3300017961	Tropical Peatland	MVRFWRRKAQQDTRNAQPAAVPADLVAWAREVDVSRLSDRTVRDAEDYLKGYRWMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIATVLALRRKQLGTGLSSLPARSCRDPRC
Ga0187783_100164601	3300017970	Tropical Peatland	MAKFWRRKEQQDTRNAQPAVPADFVAWAQEVDVSRLSDKTVRDAEDYLKGYRYMNLDLSQQMGWRVIAAVQTQVTPSPPADAQPLDVIATVLELRRKQRGTG
Ga0187783_109800541	3300017970	Tropical Peatland	MAKFWRRKAPQDTRNAQPAVPADFVAWAQEVDVSRLSDKTVRDAEDYLNGYRYMNLDLSQQMGWRVIAAVQTQVTPSPPADAQPLDVIATVLDLRRKQRGTG
Ga0187781_114378161	3300017972	Tropical Peatland	DTLNAQPAVPADFVAWAQEVDVSRLSDKTVRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTHPPPADAQPLDVIATVLELRRKQPGTG
Ga0187805_101830521	3300018007	Freshwater Sediment	MVKFWRRKVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVIATVLALRRKQLGTGLSSPSALVLPSLGYEPDDARLSCLRRSGTSR
Ga0187890_103982184	3300018044	Peatland	PGPPHAQRAVPADLVAWAGEVDVSRLSDRTFQDAEYFLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG
Ga0187766_102685182	3300018058	Tropical Peatland	MVKFWRRKAQQDTRNAQPAAVPADLVAWAREVDVSRLSDRTVRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIATVVALRRKQPGIG
Ga0187772_111219031	3300018085	Tropical Peatland	MVKFWRRKAQQDTRNSQPAALPADLVAWAQEVDVSRLSYQTVRDAEDYLKMYRHMNLDLSQQMGWRVIAAVQTQVTPSPPADAQPLDVIATVLDLRRKQ
Ga0187770_109275042	3300018090	Tropical Peatland	MAKFWRRKAQQDTRNAQPAAVPADLVAWAREVDVSRLSDRTVRDAEDYLKGYRYMNLDLSQQMGWRVIAAVQAQVTPSPPADAQPLDVIATVLALRRKQLGTGLSSLSARSGTRPV
Ga0210395_100212205	3300020582	Soil	MARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDRTIRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIATVVALRRKQPGIG
Ga0210400_114755501	3300021170	Soil	LRRSVWSGRGELMARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDRTIRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIATVVALRRKQPGIG
Ga0210396_102679732	3300021180	Soil	MVKFWRRRVQPGPPHAQPAVPADLVVWAGEVDVSRLSNRTFQDAEDYLKGYRYMNLNLSQQMGWRVIAAVEAQVTPSPPADALPVDVLATVVALRRKQLGID
Ga0210393_108373042	3300021401	Soil	MAKFWRRKAQQDTRNAQPAAVPADLVAWAQEVDVSRLSDQTVRDAEDYLKMYRHMNLDLSQQMGWRVIAAVETQVTPSPPADARMVDVLAT
Ga0210393_110490271	3300021401	Soil	QPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEYYLKGYRYMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGTG
Ga0210385_104357101	3300021402	Soil	MVKFWRRRVQQDTHNAQPAHNAQPAPGPADLAAWAREADVSRLSSQTVREAEDYLNKYRHMNLELSQQMGWRVMAAIEAQVTPSPPPFAQ
Ga0210384_117945311	3300021432	Soil	MARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDRTIRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPL
Ga0210402_110239642	3300021478	Soil	MVKFWRRRVQPEPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYIKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGIG
Ga0242644_10397831	3300022498	Soil	MARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDRTIRDAEDYLNGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIATVVALRRKQPGIG
Ga0242659_11354751	3300022522	Soil	MARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDRTIRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVIATVVALRRKQLGID
Ga0242663_10870771	3300022523	Soil	VNLNEMASIGGRKAQQNTQKTKPAALPADLVAWAREVDVSRLSDRTIRDPEDYLKGYRYMNLDLSQQMGWRVIAAVETQVTPSPPADAQPVDVLATVVALRRKQPGIG
Ga0242671_11186791	3300022714	Soil	MVKFWRRRVQQGPPHAQPAVPADLVVWAGEVDVSRLSDKTFQDAEYYLKGYRYMNLDLGHQMGLRVIAAVEAQVTPSPPGDAQPLDVLATVVALRRKQLGID
Ga0242661_11647321	3300022717	Soil	MARFWRRKAQQDTRKAQPAALPADLVAWAREVDVSRLSDQTVREAEDYLNKYRHMNLELSQQMGWRVMAAIEAQVTPSPPPFAQPLDVIATVLALRRKQPGTGLSSPPALVPPSL
Ga0242666_10090844	3300022721	Soil	MVKFWRRRVQPGPAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPAFAQPLDVIATVVALRRKQLGIG
Ga0228598_11207541	3300024227	Rhizosphere	MVKFWRRRVQPDPPHAQPAVPADLVAWAGEVDVSRLSDKTVRDAEDYLNGYRHMNPDLSQQMGWRVIAAVETQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0208356_10071294	3300025504	Arctic Peat Soil	MVKFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0208717_10990522	3300025574	Arctic Peat Soil	MVKFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGID
Ga0208586_10027501	3300025588	Arctic Peat Soil	MVRFWRRRVQPGPAHAQPAAPETLADWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0208586_10289071	3300025588	Arctic Peat Soil	MVRFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVETQVTPSPPAFAQPLDVLATVVALRRKQLGIG
Ga0208586_11275911	3300025588	Arctic Peat Soil	MVKFWRRRVQPGPPRAQPAVPADLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0208219_10057861	3300025625	Arctic Peat Soil	MVKFWRRRVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQFGVG
Ga0208219_10361762	3300025625	Arctic Peat Soil	MVRFWRRRVQPGPAHAQPAVPETLAAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQQMGWRVIAAVETQVTPSPPAFAQPLDVLATVVALRRKQLGID
Ga0208480_10097543	3300025633	Arctic Peat Soil	MVKFWRRRVQPGPAHAQPAVPADQQRRPLGRAALVAWAGEVDVSRLSNRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGIG
Ga0208589_10339441	3300025634	Arctic Peat Soil	MVKFWRRRVQPGPAHAQPAVPADQQRRPLGRAALVAWAGEVDVSRLSNRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPA
Ga0208357_10259734	3300025703	Arctic Peat Soil	MVRFWRRRVQPGPAHAQPAAPETLADWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPAFAQPLDVLATVVALRRKQLGIG
Ga0209838_10322262	3300026214	Soil	MVKFWRRRVQPGPAHAQPAAPETLAAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0209871_10097104	3300026217	Permafrost Soil	MVKFWRRRVQPGPAHAQPAVPADQQRRPLGRAALVAWAGEVDVSRLSNRTFQDAEDYLKGYRHMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0209839_100316461	3300026294	Soil	MVRFWRRRVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRLIAAVEAQVTPSPPADAQP
Ga0209839_101586511	3300026294	Soil	MVKFWRRRVQPGPPHAQPAVPADLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0208488_10077182	3300027110	Forest Soil	MVKFWRRRVQPGPAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVIATVVALRRKQLGTG
Ga0208725_10295262	3300027158	Forest Soil	GLRSEQSCSERPRAQAVWYGRGELMVKFWRRRVQPGPAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVIATVVALRRKQLGTG
Ga0208199_10069211	3300027497	Peatlands Soil	MGEPMVKFWRRRVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRYMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG
Ga0209420_10669611	3300027648	Forest Soil	MAKFWRRKAHQDTRNAQPAAVPADLIVWAREVDVSRLSDQTVRDAEDYLKMYRHLNLDLSQQMGWRVIAAVEAQVTPSPPADAQ
Ga0208696_10470982	3300027696	Peatlands Soil	VKFWRRRVQPGPPHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRYMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVLALRRKQLGIG
Ga0209773_101030662	3300027829	Bog Forest Soil	MAKFWRRKAQQDTRDAQPAVPADLVAWAQEVDVSRLSDRTVQDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIAT
Ga0209693_101675213	3300027855	Soil	MVKFWRRRVQPDPAHAQRAVPADLVAWAGEADVSRLSNRTFQDAEDYLKGYRYMNLDLSQQMGLRVIAAVEAQVTPSPPGDAQPLD
Ga0209169_100019319	3300027879	Soil	MVKFWRRRVQPGTAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVIATVVALRRKQLGTG
Ga0209275_100567581	3300027884	Soil	VPKFWRRKVQPGPPHAQPVSVPADLLVWAREVDVSRLSEKTVRDAEDYLKTYRHMNLELSQQLGWRLIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGIG
Ga0209275_103891691	3300027884	Soil	VGLRSEQSCSERPRAQAVWYGRGELMVKFWRRRVQSGPAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVIATVVALRRKQLGTG
Ga0209380_102904063	3300027889	Soil	MVKFWRRRVQPGTAHDQPAVPADLVVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVIATVVALRRKQLGTG
Ga0209624_103715013	3300027895	Forest Soil	VGRGELVPKFWRRKVQPGPPHAVPDAQPVSVPADLLVWAREVDVSRLSDKTVRNAEDYLKKYRHMNLELSQQLGWQLIAAVEAQVTPSPPADAQPLDVFATVVALRRKQLGIG
Ga0209006_108994941	3300027908	Forest Soil	PARPAGPGRSCAGAVWCRKGEVMVKFWRRRVQPGPAHAQPAVPADLVVWAGEVDVSGLSNSTLQDAEDYLKGYRHMNLDLSQQMGWRLIAAVETQVTPSPPADAQPLDVLATVVALRRKQLGIG
Ga0209006_114566572	3300027908	Forest Soil	MSGRGEVMARFWRRKARQDTRKAQPAAVPADLVAWARAVDVSRLSDRTVRDAEDYLKGYRYMNLDLSQQMGWRVIAAVEAQVTPSPPADAQPLDVIATVLALRCKQLGIG
Ga0302301_10100792	3300028731	Palsa	MVENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFSQPLDVLATLVALRRKQLGID
Ga0302234_102716201	3300028773	Palsa	MAAESAARPGHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0302303_102379571	3300028776	Palsa	WKGELMVENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFSQPLDVLATLVALRPKQLGID
Ga0302226_103252541	3300028801	Palsa	MVKLWRRRVQPGPAHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0302235_100376891	3300028877	Palsa	RRRVQPGPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0302235_104434101	3300028877	Palsa	AHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0308309_114765491	3300028906	Soil	RRVQSGPAHDQPAVPADLIVWAGEVDVSRLSNRTFQDAEDYLKGYRLMNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDIIATVVALRRKQLGTG
Ga0311369_100763774	3300029910	Palsa	MVENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFSQPLDVLATLVALRPKQLGID
Ga0311369_107670571	3300029910	Palsa	AGAVWCERGEVMVKLWRRRVQPGPAHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0311358_110151851	3300029915	Bog	LMVENWRRTLHPRPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0311339_101064746	3300029999	Palsa	AQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0311338_100884118	3300030007	Palsa	GRSCAGAVWCGKGELMVKFWRRRVQPGPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0302183_103170041	3300030509	Palsa	GRSCAGAVWCERGEVMVKLWRRRVQPGPAHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0311372_107739963	3300030520	Palsa	ESAARPGHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0210275_103044291	3300030578	Soil	MVKFWRRKVQPGPSDPQPAVPADLVVWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLDLSQQMGWRLIAAVETQVTPSPPADAQPLDVLATVVALRRKQLGIG
Ga0302314_104256033	3300030906	Palsa	SAARPGHAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0302180_100361631	3300031028	Palsa	RPGRSCAGAVWCGKGELMVKFWRRRVQPGPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLELSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0265760_101630871	3300031090	Soil	MVKFWRRRVQPGPPHAQPAVPADLVAWAGEVDVSRLSDKTVREAEDYLKMYRHMNPDLSQQMGWRVIAAIQAQVNSSPPADAQP
Ga0302325_101432841	3300031234	Palsa	CAGAVWCGKGELMVKFWRRRVQPGPPHAQPAVPETLDAWAGEVDVSRLSDRTFQDAEDYLEGYRHMNLDLSQQMGWRLIAAVETQVTPSPPAFAQPLDVLATLVALRRKQLGID
Ga0302324_1003427732	3300031236	Palsa	MVKFWRRRVQPGPAHAQPAVPADLVDWAGEVDVSRLSDRTFQDAEDYLKGYRHMINLDLSQQMGWRLIAAVETQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0302324_1011010962	3300031236	Palsa	HAQPAVPADLVVWAGEVDVSRLSDNAFQDAEYYLKAYRHMNLDLSQQMGWRLIAAFETQLNPSPPADAQPVDVIATVVALRRKQLGSD
Ga0310686_1009842381	3300031708	Soil	MVKFWRRRVQPDPAHAQPAVPADLVVWAGEVDVSRLSNRTVQDAEDYLKGYRHMNLDLSQQMGWRVIAAVETQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0310686_1010599171	3300031708	Soil	MAKFWRRKAQQDTRNAQPAVPADLVAWAQEVDVSRLSDKTVRDAEDYLKGYRYMNLDLSQQMGWRVIAAVETQVTPSPPADAQPLDVIATVLELRRKQRGTG
Ga0310686_1016870591	3300031708	Soil	VGRGELVPKFWRRKVQPGPPHAVPDAQPVSVPADLLVWAREVDVSRLSDKTVRDAEDYLEKYRHMNLELSQQLGWQLIAAVEAQVTPSPPADAQPLDVLATVVALRRKQL
Ga0310686_1131565122	3300031708	Soil	MVKFWRRRAQPGPHAQPAVPPDLVAWAGEVDVSRLSDKTVQDAEYYLKGYRHMNLDLNQQMGWRLIAAVETQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0307478_115123891	3300031823	Hardwood Forest Soil	MAKFWRRKAQQDTRNAQPAFPADFVAWAQEVDVSRLSDKTVRDAEDYLKMYRYMNLDLSQQMGWRVIAAVQTQVTPSPPADARMVDVLATVLALRRKQRGTG
Ga0348332_144943901	3300032515	Plant Litter	MVKFWRRRVQPGPAHAEPAVPADLVVWAGEVDVSRLSNRTFQDAEDYLKGYRHIVNLDLSQQMGWRLIAAVEAQVTPSPPADAQPLDVLATVVALRRKQLGID
Ga0370483_0254632_119_427	3300034124	Untreated Peat Soil	MVKFWRRRVQPGPAHAQPAVPADLVAWAGEVDVSRLSDRTFQDAEDYLKGYRHMNLELSQEMGWRVIAAVETQVTPSPPAFAQPLDVLATVVALRRKQLGID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences